BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P41250 (739 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 2PME-A nrPDB 1429 0.0 1ATI-A nrPDB 194 1e-49 5Z5E-A nrPDB 183 2e-46 1B76-A nrPDB 117 2e-26 5UCM-A nrPDB 37 0.022 2J3M-A nrPDB 37 0.023 2I4O-A nrPDB 35 0.15 1NJ2-A nrPDB 33 0.41 1BBU-A nrPDB 32 1.0 1G5I-A nrPDB 31 1.8 1LYL-A nrPDB 30 3.1 2WJ4-A nrPDB 30 3.3 3JBO-AY nrPDB 29 7.8 3J79-Y nrPDB 29 8.3 >2PME-A nrPDB Length = 693 Score = 1429 bits (3700), Expect = 0.0, Method: Compositional matrix adjust. Identities = 685/685 (100%), Positives = 685/685 (100%) Query: 55 MDGAGAEEVLAPLRLAVRQQGDLVRKLKEDKAPQVDVDKAVAELKARKRVLEAKELALQP 114 MDGAGAEEVLAPLRLAVRQQGDLVRKLKEDKAPQVDVDKAVAELKARKRVLEAKELALQP Sbjct: 1 MDGAGAEEVLAPLRLAVRQQGDLVRKLKEDKAPQVDVDKAVAELKARKRVLEAKELALQP 60 Query: 115 KDDIVDRAKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQ 174 KDDIVDRAKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQ Sbjct: 61 KDDIVDRAKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQ 120 Query: 175 ILEIDCTMLTPEPVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSVE 234 ILEIDCTMLTPEPVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSVE Sbjct: 121 ILEIDCTMLTPEPVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSVE 180 Query: 235 KKSEMESVLAQLDNYGQQELADLFVNYNVKSPITGNDLSPPVSFNLMFKTFIGPGGNMPG 294 KKSEMESVLAQLDNYGQQELADLFVNYNVKSPITGNDLSPPVSFNLMFKTFIGPGGNMPG Sbjct: 181 KKSEMESVLAQLDNYGQQELADLFVNYNVKSPITGNDLSPPVSFNLMFKTFIGPGGNMPG 240 Query: 295 YLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHF 354 YLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHF Sbjct: 241 YLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHF 300 Query: 355 VDPSEKDHPKFQNVADLHLYLYSAKAQVSGQSARKMRLGDAVEQGVINNTVLGYFIGRIY 414 VDPSEKDHPKFQNVADLHLYLYSAKAQVSGQSARKMRLGDAVEQGVINNTVLGYFIGRIY Sbjct: 301 VDPSEKDHPKFQNVADLHLYLYSAKAQVSGQSARKMRLGDAVEQGVINNTVLGYFIGRIY 360 Query: 415 LYLTKVGISPDKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLSCHAR 474 LYLTKVGISPDKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLSCHAR Sbjct: 361 LYLTKVGISPDKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLSCHAR 420 Query: 475 ATKVPLVAEKPLKEPKTVNVVQFEPSKGAIGKAYKKDAKLVMEYLAICDECYITEMEMLL 534 ATKVPLVAEKPLKEPKTVNVVQFEPSKGAIGKAYKKDAKLVMEYLAICDECYITEMEMLL Sbjct: 421 ATKVPLVAEKPLKEPKTVNVVQFEPSKGAIGKAYKKDAKLVMEYLAICDECYITEMEMLL 480 Query: 535 NEKGEFTIETEGKTFQLTKDMINVKRFQKTLYVEEVVPNVIEPSFGLGRIMYTVFEHTFH 594 NEKGEFTIETEGKTFQLTKDMINVKRFQKTLYVEEVVPNVIEPSFGLGRIMYTVFEHTFH Sbjct: 481 NEKGEFTIETEGKTFQLTKDMINVKRFQKTLYVEEVVPNVIEPSFGLGRIMYTVFEHTFH 540 Query: 595 VREGDEQRTFFSFPAVVAPFKCSVLPLSQNQEFMPFVKELSEALTRHGVSHKVDDSSGSI 654 VREGDEQRTFFSFPAVVAPFKCSVLPLSQNQEFMPFVKELSEALTRHGVSHKVDDSSGSI Sbjct: 541 VREGDEQRTFFSFPAVVAPFKCSVLPLSQNQEFMPFVKELSEALTRHGVSHKVDDSSGSI 600 Query: 655 GRRYARTDEIGVAFGVTIDFDTVNKTPHTATLRDRDSMRQIRAEISELPSIVQDLANGNI 714 GRRYARTDEIGVAFGVTIDFDTVNKTPHTATLRDRDSMRQIRAEISELPSIVQDLANGNI Sbjct: 601 GRRYARTDEIGVAFGVTIDFDTVNKTPHTATLRDRDSMRQIRAEISELPSIVQDLANGNI 660 Query: 715 TWADVEARYPLFEGQETGKKETIEE 739 TWADVEARYPLFEGQETGKKETIEE Sbjct: 661 TWADVEARYPLFEGQETGKKETIEE 685 >1ATI-A nrPDB Length = 505 Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 162/588 (27%), Positives = 251/588 (42%), Gaps = 107/588 (18%) Query: 129 KRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQILE-IDCTMLTPEP 187 KRR F Q+ IYGG+ G+YD+GP+G LKNN+ Q W + + E +E +D ++LT Sbjct: 13 KRRGFIFQSSEIYGGLQGVYDYGPLGVELKNNLKQAWWRRNVYERDDMEGLDASVLTHRL 72 Query: 188 VLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSVEKKSEMESVLAQLD 247 VL SGH FAD MV + + +R DHLLK ++++ ++E + E L Q Sbjct: 73 VLHYSGHEATFADPMVDNRITKKRYRLDHLLKEQPEEVLKRLYRAMEVEEENLHALVQAM 132 Query: 248 NYGQQELADLFVNYNVKSPITG--NDLSPPVSFNLMFKTFIGPGGN--MPGYLRPETAQG 303 + V P +G D +PP FN+MF+ GP G + YLRPETAQG Sbjct: 133 MQAPERAGGAMTAAGVLDPASGEPGDWTPPRYFNMMFQDLRGPRGGRGLLAYLRPETAQG 192 Query: 304 IFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPSEKDHP 363 IF+NFK +L+ KL F AQIG +FRNEI+PR+ + RVREF EIE+FV P E ++ Sbjct: 193 IFVNFKNVLDATSRKLGFGIAQIGKAFRNEITPRNFIFRVREFEQMEIEYFVRPGEDEY- 251 Query: 364 KFQNVADLHLYLYSAKAQVSGQSARKMRLGDAVEQGVINNTVLGYFIGRIYLYLTKVGIS 423 H Y + + + ++G+S Sbjct: 252 -------WHRYWVEERLK----------------------------------WWQEMGLS 270 Query: 424 PDKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLSCHARATKVPLVAE 483 + L Q AHYA D + +G +E+ G A R+ +DL H + + + Sbjct: 271 RENLVPYQQPPESSAHYAKATVDILYRFPHGSLELEGIAQRTDFDLGSHTKDQEALGITA 330 Query: 484 KPLK-EPKTVNVVQFEPSKGAIGKAY--KKDAKLVMEYLAICDECYITEMEMLLNEKGEF 540 + L+ E T + +P G Y + A + LA+ E + E E+ Sbjct: 331 RVLRNEHSTQRLAYRDPETGKWFVPYVIEPSAGVDRGVLALLAEAFTREELPNGEERIVL 390 Query: 541 TIETEGKTFQLTKDMINVKRFQKTLYVEEVVPNVIEPSFGLGRIMYTVFEHTFHVREGDE 600 ++ + ++ + R + T Y + + ++ + GLGR++Y E T G+ Sbjct: 391 KLKPQLAPIKVAVIPLVKNRPEITEYAKRLKARLL--ALGLGRVLY---EDT-----GNI 440 Query: 601 QRTFFSFPAVVAPFKCSVLPLSQNQEFMPFVKELSEALTRHGVSHKVDDSSGSIGRRYAR 660 + + V PF +V Sbjct: 441 GKAYRRHDEVGTPFAVTV-----------------------------------------D 459 Query: 661 TDEIGVAFGVTIDFDTVNKTPHTATLRDRDSMRQIRAEISELPSIVQD 708 D IG + D + T T+RDRD+M QIR + EL +++ Sbjct: 460 YDTIGQS------KDGTTRLKDTVTVRDRDTMEQIRLHVDELEGFLRE 501 >5Z5E-A nrPDB Length = 534 Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 123/385 (31%), Positives = 179/385 (46%), Gaps = 67/385 (17%) Query: 132 FFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQ-EEQILEIDCTMLTPEPVLK 190 FFY A IY ++G YD+G +G LKNN I W+ +F++ E+D ++ P+ V Sbjct: 33 FFY-PASEIYNSIAGFYDYGYLGTLLKNNFINEWKNYFLRLHPNFWEVDPAIVMPKEVFI 91 Query: 191 TSGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSVEKKSEMESVLAQLDNYG 250 SGH++ F D +V + KNG FRADHL++ L + K SEME +L Sbjct: 92 ASGHLENFNDPIV-ECKNGHRFRADHLIEEKL-----NIKAEGLSLSEMEELLK------ 139 Query: 251 QQELADLFVNYNVKSPITGNDLSPPVSFNLMFKTFIGPGGNMP----------------- 293 NV+ PI L FNLMF +IGP Sbjct: 140 -----------NVRCPICNAPLGKVKWFNLMFPIYIGPDSQEALNLLKNLKENVSEQYIK 188 Query: 294 -------------GYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGL 340 YLRPETAQG ++ FKR ++ KLP A +G +FRNEISPR L Sbjct: 189 DIIERVKKMVENEAYLRPETAQGPYVMFKREFILHRQKLPLGLAVVGKAFRNEISPRQLL 248 Query: 341 IRVREFTMAEIEHFVDPSEKDHPKFQNVADLHLYLYSAKAQVSGQSARKMRLGDAVEQGV 400 +R+REFT AE++ F DP + + V D+ L + + + + Sbjct: 249 LRLREFTQAELQIFFDPEDNEF-DINEVKDVELNFLDKEGNYKRIKVKDLPFPE------ 301 Query: 401 INNTVLGYFIGRIYLYLTKVGISPDKLRFRQHMENEMAHYACDCWDAE-SKTSYGWIEIV 459 YF+G++ + ++GI ++LRFR+ E E A Y D E + +YGW E+ Sbjct: 302 ----FYAYFVGKVKQFYERLGIPEERLRFRELSEKEKAFYNKYHVDIEINFPTYGWKEVG 357 Query: 460 GCADRSCYDLSCHARATKVPLVAEK 484 G R+ +DLS H + + L +K Sbjct: 358 GIHYRTDHDLSGHMKVSGKDLTVQK 382 Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 80/143 (55%), Gaps = 12/143 (8%) Query: 571 VPNVIEPSFGLGRIMYTVF-----EHTFHVREGD----EQRTFFSFPAVVAPFKCSVLPL 621 +P+V+E SFG+ R + + E + + + E+R P +AP K +V PL Sbjct: 388 IPHVLELSFGVDRNVLALIDLFLTEEEYEIERDNQKVKEKRVVLKIPKHLAPIKVAVFPL 447 Query: 622 SQNQEFMPFVKELSEALTRHGVSHKVDDSSGSIGRRYARTDEIGVAFGVTIDFDTVNKTP 681 + E + KE+ L + + D GSIGRRY R DEIGV + +TID+ T+ Sbjct: 448 LKKPELIEKAKEVYNMLKNYFYP-IIYDEQGSIGRRYRRVDEIGVPYAITIDYQTLED-- 504 Query: 682 HTATLRDRDSMRQIRAEISELPS 704 +T T+RDRD+M+Q+R +I +LP+ Sbjct: 505 NTVTIRDRDTMKQVRVKIEDLPN 527 >1B76-A nrPDB Length = 442 Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 112/441 (25%), Positives = 177/441 (40%), Gaps = 104/441 (23%) Query: 273 SPPVSFNLMFKTFIGPGGN--MPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSF 330 +PP FN+MF+ GP G + YLRPETAQGIF+NFK +L+ KL F AQIG +F Sbjct: 97 TPPRYFNMMFQDLRGPRGGRGLLAYLRPETAQGIFVNFKNVLDATSRKLGFGIAQIGKAF 156 Query: 331 RNEISPRSGLIRVREFTMAEIEHFVDPSEKDHPKFQNVADLHLYLYSAKAQVSGQSARKM 390 RNEI+PR+ + RVREF EIE+FV P E ++ H Y + + Sbjct: 157 RNEITPRNFIFRVREFEQMEIEYFVRPGEDEY--------WHRYWVEERLK--------- 199 Query: 391 RLGDAVEQGVINNTVLGYFIGRIYLYLTKVGISPDKLRFRQHMENEMAHYACDCWDAESK 450 + ++G+S + L Q AHYA D + Sbjct: 200 -------------------------WWQEMGLSRENLVPYQQPPESSAHYAKATVDILYR 234 Query: 451 TSYGWIEIVGCADRSCYDLSCHARATKVPLVAEKPLK-EPKTVNVVQFEPSKGAIGKAY- 508 +G +E+ G A R+ +DL H + + + + L+ E T + +P G Y Sbjct: 235 FPHGSLELEGIAQRTDFDLGSHTKDQEALGITARVLRNEHSTQRLAYRDPETGKWFVPYV 294 Query: 509 -KKDAKLVMEYLAICDECYITEMEMLLNEKGEFTIETEGKTFQLTKDMINVKRFQKTLYV 567 + A + LA+ E + E E+ ++ + ++ + R + T Y Sbjct: 295 IEPSAGVDRGVLALLAEAFTREELPNGEERIVLKLKPQLAPIKVAVIPLVKNRPEITEYA 354 Query: 568 EEVVPNVIEPSFGLGRIMYTVFEHTFHVREGDEQRTFFSFPAVVAPFKCSVLPLSQNQEF 627 + + ++ + GLGR++Y E T G+ + + V PF +V Sbjct: 355 KRLKARLL--ALGLGRVLY---EDT-----GNIGKAYRRHDEVGTPFAVTV--------- 395 Query: 628 MPFVKELSEALTRHGVSHKVDDSSGSIGRRYARTDEIGVAFGVTIDFDTVNKTPHTATLR 687 D IG + D + T T+R Sbjct: 396 --------------------------------DYDTIGQS------KDGTTRLKDTVTVR 417 Query: 688 DRDSMRQIRAEISELPSIVQD 708 DRD+M QIR + EL +++ Sbjct: 418 DRDTMEQIRLHVDELEGFLRE 438 Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 37/80 (46%), Positives = 50/80 (62%), Gaps = 1/80 (1%) Query: 129 KRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQILE-IDCTMLTPEP 187 KRR F Q+ IYGG+ G+YD+GP+G LKNN+ Q W + + E +E +D ++LT Sbjct: 13 KRRGFIFQSSEIYGGLQGVYDYGPLGVELKNNLKQAWWRRNVYERDDMEGLDASVLTHRL 72 Query: 188 VLKTSGHVDKFADFMVKDVK 207 VL SGH FAD MV + K Sbjct: 73 VLHYSGHEATFADPMVDNAK 92 >5UCM-A nrPDB Length = 579 Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust. Identities = 18/37 (48%), Positives = 22/37 (59%) Query: 318 KLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHF 354 +LP QI FR+EI PR GL+R REF M + F Sbjct: 135 QLPINFYQIQTKFRDEIRPRFGLMRGREFIMKDAYSF 171 >2J3M-A nrPDB Length = 572 Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 16/151 (10%) Query: 573 NVIEPSFGLG--RIMYTVFEHTFHVREGDEQRTFFSFPAVVAPFKCSVLPLSQNQEFMP- 629 +VI +G+G R++ + E DE+ ++P +APF V+ ++ E+ Sbjct: 435 SVIMGCYGIGVSRLLSAIVEQN-----ADERG--INWPTGIAPFDLHVVQMNVKDEYQTK 487 Query: 630 FVKELSEALTRHGVSHKVDDSSGSIGRRYARTDEIGVAFGVTIDFDTVNKTPHTATLRDR 689 +E+ +T G VDD + G ++A D IG +T+ V+ R Sbjct: 488 LSQEVEAMMTEAGYEVLVDDRNERAGVKFADADLIGCPIRITVGKKAVDGVVEVKIKRTG 547 Query: 690 DSMRQIRAEISELPSIVQDLANGNITWADVE 720 + M ++R E EL S + L N T ++VE Sbjct: 548 E-MLEVRKE--ELESTLSILMN---TTSEVE 572 Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 6/53 (11%) Query: 318 KLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHF------VDPSEKDHPK 364 +LP QI +R+E RSGL+R REF M + F +D S +D+ K Sbjct: 127 RLPLNLYQIQTKYRDEKRSRSGLLRGREFIMKDGYSFHADEASLDQSYRDYEK 179 >2I4O-A nrPDB Length = 458 Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust. Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 607 FPAVVAPFKCSVLPLSQNQEFMPFV-KELSEALTRHGVSHKVDDSSGSIGRRYARTDEIG 665 +P VAPF+ ++L L Q +L L+ GV DD+ G ++A D IG Sbjct: 359 WPEAVAPFRVTILNLKQGDAATDAACDQLYRELSAKGVDVLYDDTDQRAGAKFATADLIG 418 Query: 666 VAFGVTI 672 + + + + Sbjct: 419 IPWQIHV 425 >1NJ2-A nrPDB Length = 501 Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust. Identities = 42/178 (23%), Positives = 75/178 (42%), Gaps = 18/178 (10%) Query: 541 TIETEGKTFQLTKDMINVKRFQKTLYVEEVVPN-----VIEPSFGLG-RIMYTVFEHTFH 594 T+ +GKT Q+ + F +T ++ P V + +GL R++ +V H Sbjct: 243 TLMPDGKTLQIGTVHNLGQTFARTFEIKFETPEGDHEYVHQTCYGLSDRVIASVI--AIH 300 Query: 595 VREGDEQRTFFSFPAVVAPFKCSVLPL---SQNQEFMPFVKELSEALTRHGVSHKVDDSS 651 GDE + P VA + ++P+ +E M +EL L G +DD Sbjct: 301 ---GDE--SGLCLPPDVAAHQVVIVPIIFKKAAEEVMEACRELRSRLEAAGFRVHLDDRD 355 Query: 652 GSIGRRYARTDEIGVAFGVTIDFDTVNKTPHTATLRDRDSMRQIRAEISELPSIVQDL 709 GR+Y + GV V I + K A + RD+ ++ A++ + +++L Sbjct: 356 IRAGRKYYEWEMRGVPLRVEIGPRDLEKG--AAVISRRDTGEKVTADLQGIEETLREL 411 >1BBU-A nrPDB Length = 504 Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%) Query: 547 KTFQLTKDMINVKRFQKTLYVEEVVPNVIEPSFGLGRIMYTVFEHTFHVREGDEQRTFFS 606 K ++ DM ++ F + E + +E S+GLGRI+ +FE Q TF + Sbjct: 333 KKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEVAEAHL--IQPTFIT 390 Query: 607 -FPAVVAPF 614 +PA V+P Sbjct: 391 EYPAEVSPL 399 >1G5I-A nrPDB Length = 454 Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 3/65 (4%) Query: 294 GYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFR---NEISPRSGLIRVREFTMAE 350 G LR G ++ L+ KLPF AQIG F N S + RV E T A Sbjct: 137 GKLRATLLHGALEHYVNCLDLVNRKLPFGLAQIGVCFHPVSNSNQTPSSVTRVGEKTEAS 196 Query: 351 IEHFV 355 + F Sbjct: 197 LVWFT 201 >1LYL-A nrPDB Length = 504 Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust. Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 3/69 (4%) Query: 547 KTFQLTKDMINVKRFQKTLYVEEVVPNVIEPSFGLGRIMYTVFEHTFHVREGDEQRTFFS 606 K ++ DM ++ F + E + +E S+GLGRI+ +F+ Q TF + Sbjct: 333 KKYRPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEVAEAHL--IQPTFIT 390 Query: 607 -FPAVVAPF 614 +PA V+P Sbjct: 391 EYPAEVSPL 399 >2WJ4-A nrPDB Length = 276 Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust. Identities = 11/21 (52%), Positives = 13/21 (61%) Query: 425 DKLRFRQHMENEMAHYACDCW 445 D+ R R H+ EMA Y DCW Sbjct: 165 DEKRVRHHLLEEMADYGYDCW 185 >3JBO-AY nrPDB Length = 101 Score = 28.9 bits (63), Expect = 7.8, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 6/50 (12%) Query: 470 SCHARA------TKVPLVAEKPLKEPKTVNVVQFEPSKGAIGKAYKKDAK 513 SCH++ K PL +EK +K+ + +N + F K A K KK K Sbjct: 12 SCHSKTLDKYGLIKYPLTSEKAMKKIEEINTLVFMCDKRANKKNIKKSVK 61 >3J79-Y nrPDB Length = 190 Score = 28.9 bits (63), Expect = 8.3, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 6/50 (12%) Query: 470 SCHARA------TKVPLVAEKPLKEPKTVNVVQFEPSKGAIGKAYKKDAK 513 SCH++ K PL +EK +K+ + +N + F K A K KK K Sbjct: 99 SCHSKTLDKYGLIKYPLTSEKAMKKIEEINTLVFMCDKRANKKNIKKSVK 148 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 2PME-A nrPDB 1118 0.0 1ATI-A nrPDB 689 0.0 1B76-A nrPDB 483 e-137 5Z5E-A nrPDB 479 e-135 Sequences not found previously or not previously below threshold: 5UCM-A nrPDB 54 3e-07 1NJ8-A nrPDB 52 1e-06 5C53-B nrPDB 51 2e-06 5C52-B nrPDB 51 2e-06 3IKM-B nrPDB 51 2e-06 3IKL-A nrPDB 51 2e-06 1G5I-A nrPDB 44 2e-04 1NJ2-A nrPDB 42 7e-04 1NYR-A nrPDB 37 0.039 3IAL-A nrPDB 36 0.071 1QF6-A nrPDB 36 0.075 4HWO-A nrPDB 36 0.085 2J3M-A nrPDB 35 0.096 5OFQ-A nrPDB 35 0.11 5XIP-A nrPDB 34 0.19 4YYE-A nrPDB 34 0.24 3IS0-X nrPDB 33 0.38 4NCX-A nrPDB 32 0.81 5F9Y-A nrPDB 32 0.92 4P3N-A nrPDB 32 1.1 2I4O-A nrPDB 32 1.1 6NAB-A nrPDB 31 1.8 3NRG-A nrPDB 31 1.8 1BBU-A nrPDB 31 1.9 5OFN-A nrPDB 31 2.6 5XIG-A nrPDB 31 2.6 1LYL-A nrPDB 31 2.9 3DO8-A nrPDB 30 3.2 6H9X-A nrPDB 30 3.3 6AH3-B nrPDB 30 4.5 3TA0-A nrPDB 29 5.6 1MKY-A nrPDB 29 6.0 3TW9-A nrPDB 29 6.5 2ZR2-A nrPDB 29 7.0 >2PME-A nrPDB Length = 693 Score = 1118 bits (2891), Expect = 0.0, Method: Composition-based stats. Identities = 685/685 (100%), Positives = 685/685 (100%) Query: 55 MDGAGAEEVLAPLRLAVRQQGDLVRKLKEDKAPQVDVDKAVAELKARKRVLEAKELALQP 114 MDGAGAEEVLAPLRLAVRQQGDLVRKLKEDKAPQVDVDKAVAELKARKRVLEAKELALQP Sbjct: 1 MDGAGAEEVLAPLRLAVRQQGDLVRKLKEDKAPQVDVDKAVAELKARKRVLEAKELALQP 60 Query: 115 KDDIVDRAKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQ 174 KDDIVDRAKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQ Sbjct: 61 KDDIVDRAKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQ 120 Query: 175 ILEIDCTMLTPEPVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSVE 234 ILEIDCTMLTPEPVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSVE Sbjct: 121 ILEIDCTMLTPEPVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSVE 180 Query: 235 KKSEMESVLAQLDNYGQQELADLFVNYNVKSPITGNDLSPPVSFNLMFKTFIGPGGNMPG 294 KKSEMESVLAQLDNYGQQELADLFVNYNVKSPITGNDLSPPVSFNLMFKTFIGPGGNMPG Sbjct: 181 KKSEMESVLAQLDNYGQQELADLFVNYNVKSPITGNDLSPPVSFNLMFKTFIGPGGNMPG 240 Query: 295 YLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHF 354 YLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHF Sbjct: 241 YLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHF 300 Query: 355 VDPSEKDHPKFQNVADLHLYLYSAKAQVSGQSARKMRLGDAVEQGVINNTVLGYFIGRIY 414 VDPSEKDHPKFQNVADLHLYLYSAKAQVSGQSARKMRLGDAVEQGVINNTVLGYFIGRIY Sbjct: 301 VDPSEKDHPKFQNVADLHLYLYSAKAQVSGQSARKMRLGDAVEQGVINNTVLGYFIGRIY 360 Query: 415 LYLTKVGISPDKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLSCHAR 474 LYLTKVGISPDKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLSCHAR Sbjct: 361 LYLTKVGISPDKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLSCHAR 420 Query: 475 ATKVPLVAEKPLKEPKTVNVVQFEPSKGAIGKAYKKDAKLVMEYLAICDECYITEMEMLL 534 ATKVPLVAEKPLKEPKTVNVVQFEPSKGAIGKAYKKDAKLVMEYLAICDECYITEMEMLL Sbjct: 421 ATKVPLVAEKPLKEPKTVNVVQFEPSKGAIGKAYKKDAKLVMEYLAICDECYITEMEMLL 480 Query: 535 NEKGEFTIETEGKTFQLTKDMINVKRFQKTLYVEEVVPNVIEPSFGLGRIMYTVFEHTFH 594 NEKGEFTIETEGKTFQLTKDMINVKRFQKTLYVEEVVPNVIEPSFGLGRIMYTVFEHTFH Sbjct: 481 NEKGEFTIETEGKTFQLTKDMINVKRFQKTLYVEEVVPNVIEPSFGLGRIMYTVFEHTFH 540 Query: 595 VREGDEQRTFFSFPAVVAPFKCSVLPLSQNQEFMPFVKELSEALTRHGVSHKVDDSSGSI 654 VREGDEQRTFFSFPAVVAPFKCSVLPLSQNQEFMPFVKELSEALTRHGVSHKVDDSSGSI Sbjct: 541 VREGDEQRTFFSFPAVVAPFKCSVLPLSQNQEFMPFVKELSEALTRHGVSHKVDDSSGSI 600 Query: 655 GRRYARTDEIGVAFGVTIDFDTVNKTPHTATLRDRDSMRQIRAEISELPSIVQDLANGNI 714 GRRYARTDEIGVAFGVTIDFDTVNKTPHTATLRDRDSMRQIRAEISELPSIVQDLANGNI Sbjct: 601 GRRYARTDEIGVAFGVTIDFDTVNKTPHTATLRDRDSMRQIRAEISELPSIVQDLANGNI 660 Query: 715 TWADVEARYPLFEGQETGKKETIEE 739 TWADVEARYPLFEGQETGKKETIEE Sbjct: 661 TWADVEARYPLFEGQETGKKETIEE 685 >1ATI-A nrPDB Length = 505 Score = 689 bits (1779), Expect = 0.0, Method: Composition-based stats. Identities = 162/588 (27%), Positives = 251/588 (42%), Gaps = 107/588 (18%) Query: 129 KRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQILE-IDCTMLTPEP 187 KRR F Q+ IYGG+ G+YD+GP+G LKNN+ Q W + + E +E +D ++LT Sbjct: 13 KRRGFIFQSSEIYGGLQGVYDYGPLGVELKNNLKQAWWRRNVYERDDMEGLDASVLTHRL 72 Query: 188 VLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSVEKKSEMESVLAQLD 247 VL SGH FAD MV + + +R DHLLK ++++ ++E + E L Q Sbjct: 73 VLHYSGHEATFADPMVDNRITKKRYRLDHLLKEQPEEVLKRLYRAMEVEEENLHALVQAM 132 Query: 248 NYGQQELADLFVNYNVKSPITG--NDLSPPVSFNLMFKTFIGPGGN--MPGYLRPETAQG 303 + V P +G D +PP FN+MF+ GP G + YLRPETAQG Sbjct: 133 MQAPERAGGAMTAAGVLDPASGEPGDWTPPRYFNMMFQDLRGPRGGRGLLAYLRPETAQG 192 Query: 304 IFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPSEKDHP 363 IF+NFK +L+ KL F AQIG +FRNEI+PR+ + RVREF EIE+FV P E ++ Sbjct: 193 IFVNFKNVLDATSRKLGFGIAQIGKAFRNEITPRNFIFRVREFEQMEIEYFVRPGEDEY- 251 Query: 364 KFQNVADLHLYLYSAKAQVSGQSARKMRLGDAVEQGVINNTVLGYFIGRIYLYLTKVGIS 423 H Y + + + ++G+S Sbjct: 252 -------WHRYWVEERLK----------------------------------WWQEMGLS 270 Query: 424 PDKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLSCHARATKVPLVAE 483 + L Q AHYA D + +G +E+ G A R+ +DL H + + + Sbjct: 271 RENLVPYQQPPESSAHYAKATVDILYRFPHGSLELEGIAQRTDFDLGSHTKDQEALGITA 330 Query: 484 KPLK-EPKTVNVVQFEPSKGAIGKAY--KKDAKLVMEYLAICDECYITEMEMLLNEKGEF 540 + L+ E T + +P G Y + A + LA+ E + E E+ Sbjct: 331 RVLRNEHSTQRLAYRDPETGKWFVPYVIEPSAGVDRGVLALLAEAFTREELPNGEERIVL 390 Query: 541 TIETEGKTFQLTKDMINVKRFQKTLYVEEVVPNVIEPSFGLGRIMYTVFEHTFHVREGDE 600 ++ + ++ + R + T Y + + ++ + GLGR++Y E T G+ Sbjct: 391 KLKPQLAPIKVAVIPLVKNRPEITEYAKRLKARLL--ALGLGRVLY---EDT-----GNI 440 Query: 601 QRTFFSFPAVVAPFKCSVLPLSQNQEFMPFVKELSEALTRHGVSHKVDDSSGSIGRRYAR 660 + + V PF +V Sbjct: 441 GKAYRRHDEVGTPFAVTV-----------------------------------------D 459 Query: 661 TDEIGVAFGVTIDFDTVNKTPHTATLRDRDSMRQIRAEISELPSIVQD 708 D IG + D + T T+RDRD+M QIR + EL +++ Sbjct: 460 YDTIGQS------KDGTTRLKDTVTVRDRDTMEQIRLHVDELEGFLRE 501 >1B76-A nrPDB Length = 442 Score = 483 bits (1244), Expect = e-137, Method: Composition-based stats. Identities = 112/442 (25%), Positives = 177/442 (40%), Gaps = 104/442 (23%) Query: 272 LSPPVSFNLMFKTFIGPGGN--MPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNS 329 +PP FN+MF+ GP G + YLRPETAQGIF+NFK +L+ KL F AQIG + Sbjct: 96 WTPPRYFNMMFQDLRGPRGGRGLLAYLRPETAQGIFVNFKNVLDATSRKLGFGIAQIGKA 155 Query: 330 FRNEISPRSGLIRVREFTMAEIEHFVDPSEKDHPKFQNVADLHLYLYSAKAQVSGQSARK 389 FRNEI+PR+ + RVREF EIE+FV P E ++ H Y + + Sbjct: 156 FRNEITPRNFIFRVREFEQMEIEYFVRPGEDEY--------WHRYWVEERLK-------- 199 Query: 390 MRLGDAVEQGVINNTVLGYFIGRIYLYLTKVGISPDKLRFRQHMENEMAHYACDCWDAES 449 + ++G+S + L Q AHYA D Sbjct: 200 --------------------------WWQEMGLSRENLVPYQQPPESSAHYAKATVDILY 233 Query: 450 KTSYGWIEIVGCADRSCYDLSCHARATKVPLVAEKPLK-EPKTVNVVQFEPSKGAIGKAY 508 + +G +E+ G A R+ +DL H + + + + L+ E T + +P G Y Sbjct: 234 RFPHGSLELEGIAQRTDFDLGSHTKDQEALGITARVLRNEHSTQRLAYRDPETGKWFVPY 293 Query: 509 --KKDAKLVMEYLAICDECYITEMEMLLNEKGEFTIETEGKTFQLTKDMINVKRFQKTLY 566 + A + LA+ E + E E+ ++ + ++ + R + T Y Sbjct: 294 VIEPSAGVDRGVLALLAEAFTREELPNGEERIVLKLKPQLAPIKVAVIPLVKNRPEITEY 353 Query: 567 VEEVVPNVIEPSFGLGRIMYTVFEHTFHVREGDEQRTFFSFPAVVAPFKCSVLPLSQNQE 626 + + ++ + GLGR++Y E T G+ + + V PF +V Sbjct: 354 AKRLKARLL--ALGLGRVLY---EDT-----GNIGKAYRRHDEVGTPFAVTV-------- 395 Query: 627 FMPFVKELSEALTRHGVSHKVDDSSGSIGRRYARTDEIGVAFGVTIDFDTVNKTPHTATL 686 D IG + D + T T+ Sbjct: 396 ---------------------------------DYDTIGQS------KDGTTRLKDTVTV 416 Query: 687 RDRDSMRQIRAEISELPSIVQD 708 RDRD+M QIR + EL +++ Sbjct: 417 RDRDTMEQIRLHVDELEGFLRE 438 Score = 138 bits (348), Expect = 7e-33, Method: Composition-based stats. Identities = 37/80 (46%), Positives = 50/80 (62%), Gaps = 1/80 (1%) Query: 129 KRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQILE-IDCTMLTPEP 187 KRR F Q+ IYGG+ G+YD+GP+G LKNN+ Q W + + E +E +D ++LT Sbjct: 13 KRRGFIFQSSEIYGGLQGVYDYGPLGVELKNNLKQAWWRRNVYERDDMEGLDASVLTHRL 72 Query: 188 VLKTSGHVDKFADFMVKDVK 207 VL SGH FAD MV + K Sbjct: 73 VLHYSGHEATFADPMVDNAK 92 >5Z5E-A nrPDB Length = 534 Score = 479 bits (1233), Expect = e-135, Method: Composition-based stats. Identities = 137/530 (25%), Positives = 219/530 (41%), Gaps = 105/530 (19%) Query: 131 RFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQ-EEQILEIDCTMLTPEPVL 189 + F+ A IY ++G YD+G +G LKNN I W+ +F++ E+D ++ P+ V Sbjct: 31 KGFFYPASEIYNSIAGFYDYGYLGTLLKNNFINEWKNYFLRLHPNFWEVDPAIVMPKEVF 90 Query: 190 KTSGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSVEKKSEMESVLAQLDNY 249 SGH++ F D +V + KNG FRADHL++ L + K SEME +L Sbjct: 91 IASGHLENFNDPIV-ECKNGHRFRADHLIEEKL-----NIKAEGLSLSEMEELLK----- 139 Query: 250 GQQELADLFVNYNVKSPITGNDLSPPVSFNLMFKTFIGPGGNMP---------------- 293 NV+ PI L FNLMF +IGP Sbjct: 140 ------------NVRCPICNAPLGKVKWFNLMFPIYIGPDSQEALNLLKNLKENVSEQYI 187 Query: 294 --------------GYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSG 339 YLRPETAQG ++ FKR ++ KLP A +G +FRNEISPR Sbjct: 188 KDIIERVKKMVENEAYLRPETAQGPYVMFKREFILHRQKLPLGLAVVGKAFRNEISPRQL 247 Query: 340 LIRVREFTMAEIEHFVDPSEKDHPKFQNVADLHLYLYSAKAQVSGQSARKMRLGDAVEQG 399 L+R+REFT AE++ F DP + + V D+ L + + + + Sbjct: 248 LLRLREFTQAELQIFFDPEDNEF-DINEVKDVELNFLDKEGNYKRIKVKDLPFPE----- 301 Query: 400 VINNTVLGYFIGRIYLYLTKVGISPDKLRFRQHMENEMAHYACDCWDAE-SKTSYGWIEI 458 YF+G++ + ++GI ++LRFR+ E E A Y D E + +YGW E+ Sbjct: 302 -----FYAYFVGKVKQFYERLGIPEERLRFRELSEKEKAFYNKYHVDIEINFPTYGWKEV 356 Query: 459 VGCADRSCYDLSCHARATKVPLVAEKPLKEPKTVNVVQFEPSKGAIGKAY--KKDAKLVM 516 G R+ +DLS H + + L +K + + + Sbjct: 357 GGIHYRTDHDLSGHMKVSGKDLTVQK----------------DNKKFIPHVLELSFGVDR 400 Query: 517 EYLAICDECYITEMEMLL--------NEKGEFTIETEGKTFQLTKDMINVKRFQKTLYVE 568 LA+ D ++TE E + ++ I ++ + K + + Sbjct: 401 NVLALID-LFLTEEEYEIERDNQKVKEKRVVLKIPKHLAPIKVAVFPLLKK-PELIEKAK 458 Query: 569 EVVPNVIEPSFGLGRIMYTVFEHTFHVREGDEQRTFFSFPAVVAPFKCSV 618 EV N+++ F Y + +G R + + P+ ++ Sbjct: 459 EVY-NMLKNYF------YPIIYD----EQGSIGRRYRRVDEIGVPYAITI 497 Score = 168 bits (425), Expect = 8e-42, Method: Composition-based stats. Identities = 51/146 (34%), Positives = 82/146 (56%), Gaps = 12/146 (8%) Query: 568 EEVVPNVIEPSFGLGRIMYTVF-----EHTFHVREGD----EQRTFFSFPAVVAPFKCSV 618 ++ +P+V+E SFG+ R + + E + + + E+R P +AP K +V Sbjct: 385 KKFIPHVLELSFGVDRNVLALIDLFLTEEEYEIERDNQKVKEKRVVLKIPKHLAPIKVAV 444 Query: 619 LPLSQNQEFMPFVKELSEALTRHGVSHKVDDSSGSIGRRYARTDEIGVAFGVTIDFDTVN 678 PL + E + KE+ L + + D GSIGRRY R DEIGV + +TID+ T+ Sbjct: 445 FPLLKKPELIEKAKEVYNMLKNYFYP-IIYDEQGSIGRRYRRVDEIGVPYAITIDYQTLE 503 Query: 679 KTPHTATLRDRDSMRQIRAEISELPS 704 +T T+RDRD+M+Q+R +I +LP+ Sbjct: 504 D--NTVTIRDRDTMKQVRVKIEDLPN 527 >5UCM-A nrPDB Length = 579 Score = 53.6 bits (127), Expect = 3e-07, Method: Composition-based stats. Identities = 90/467 (19%), Positives = 160/467 (34%), Gaps = 85/467 (18%) Query: 309 KRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPSEKDHPKFQNV 368 + L + LP QI FR+EI PR GL+R REF M + F H ++ Sbjct: 127 RNELNSYKQ-LPINFYQIQTKFRDEIRPRFGLMRGREFIMKDAYSF-------HLSQDSL 178 Query: 369 ADLHLYLYSAKAQVSGQSARKMRLGDAVEQGVINNTVLGYFI----GRIYLYLTKVGISP 424 + +Y A +++ + R A + + + + G + + Sbjct: 179 QQTYDGMYQAYSKIFSRLGLDFRPVQADNGSIGGSGSHEFHVLANSGEDDIVFSDSSDYA 238 Query: 425 DKLRFRQHMENEMAHYA----------------CDCWD---------AESKTSYGWIE-- 457 + + + E A + D ++ +G E Sbjct: 239 ANIEKAEAVPRESARGSATEDMRLVDTPNTKTIAALVDGFQLPIEKTIKTLVVHGAEEGT 298 Query: 458 IVGCADRSCYDLSCHARATKVPLVAEKPLKEPKTVNVVQFEPSKGAIGKAYKKDAKLVME 517 +V R ++L+ +A PLVA + + G++G A +V Sbjct: 299 LVALIVRGDHELN-EIKAANQPLVASPLVFASEAEIRAAIGAGPGSLGPVNLPIACIVDR 357 Query: 518 YLAICDE-------------CYITEMEMLLNEKGEFTIETEGKTFQLTKDMINVKR---- 560 +A+ + E ++ L E + EG K + +KR Sbjct: 358 SVALMSDFAAGANIEDKHYFGVNWERDLPLPEVADLRNVVEGDPSPDGKGTLVIKRGIEV 417 Query: 561 ---FQK-TLYVEEVVPNVIEP------------SFGLGRIMYTVFEHTFHVREGDEQRTF 604 FQ T Y E + +V+ G+ R++ E H G Sbjct: 418 GHIFQLGTKYSEAMKLSVLSEQGKPVNLIMGCYGIGVSRVVAAAIEQN-HDERG------ 470 Query: 605 FSFPAVVAPFKCSVLPLSQNQEFMPFVKE-LSEALTRHGVSHKVD--DSSGSIGRRYART 661 +P+ +APF+ +++PL E + + L LT G +D D S G ++A Sbjct: 471 ILWPSALAPFQIALVPLKYETESVKQATDKLYAELTAAGFEVLLDDRDKKTSPGVKFADM 530 Query: 662 DEIGVAFGVTIDFDTVNKTPHTATLRDRDSMRQIRAEISELPSIVQD 708 + IG+ + I +++ R RDS Q I EL S + + Sbjct: 531 ELIGIPHRIVISDRGLSEGVLEYKGR-RDSESQ-NLPIGELMSFITE 575 >1NJ8-A nrPDB Length = 459 Score = 51.7 bits (122), Expect = 1e-06, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 74/180 (41%), Gaps = 19/180 (10%) Query: 541 TIETEGKTFQLTKDMINVKRFQKTLYVEEVVP-----NVIEPSFGL-GRIMYTVFEHTFH 594 TI +G+T Q+ + F KT + P + +G+ R++ ++ Sbjct: 211 TIFPDGRTMQIATVHNLGQNFSKTFEIIFETPTGDKDYAYQTCYGISDRVIASII----- 265 Query: 595 VREGDEQRTFFSFPAVVAPFKCSVLPLS---QNQEFMPFVKELSEALTRHGVSHKVDDSS 651 GDE+ P +VAP + ++PL + M KE+ E L H +DD Sbjct: 266 AIHGDEKGLIL--PPIVAPIQVVIVPLIFKGKEDIVMEKAKEIYEKLKGKFRVH-IDDRD 322 Query: 652 GSIGRRYARTDEIGVAFGVTIDFDTVNKTPHTATLRDRDSMRQIRAEISELPSIVQDLAN 711 GR++ + GV + + + TL RD+M + + + ++L +V+ N Sbjct: 323 IRPGRKFNDWEIKGVPLRIEVGPKDIENKK--ITLFRRDTMEKFQVDETQLMEVVEKTLN 380 Score = 31.7 bits (70), Expect = 1.3, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Query: 296 LRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVRE 345 LRP + I+ K ++ + LP QI N+FR E LIR+RE Sbjct: 102 LRPTSETPIYYMMKLWVKVHT-DLPIKIYQIVNTFRYETKHTRPLIRLRE 150 >5C53-B nrPDB Length = 903 Score = 50.9 bits (120), Expect = 2e-06, Method: Composition-based stats. Identities = 40/338 (11%), Positives = 86/338 (25%), Gaps = 74/338 (21%) Query: 288 PGGNMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFR---NEISPRSGLIRVR 344 PG + LR G ++ L+ +LP+ AQIG F + R+G+ + Sbjct: 140 PGDSAFRKLRENLLHGALEHYVNCLDLVNKRLPYGLAQIGVCFHPVFDTKQIRNGVKSIG 199 Query: 345 EFTMAEIEHFVDPSEKDHPKFQNVADLHLYLYSAKAQVSGQSARKMRLGDAVEQGVINNT 404 E T A + F P + + + Q Sbjct: 200 EKTEASLVWFTPP--------RTSNQWLDFWLRHRLQ----------------------- 228 Query: 405 VLGYFIGRIYLYLTKVGISPDKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADR 464 + K +SP + E +G I Sbjct: 229 -----------WWRKFAMSPSNFSSSDCQDEEGRKGNK----LYYNFPWGKELIE----- 268 Query: 465 SCYDLSCHARATKVPLVAEKPLKEPKTVNVVQFEPSKGAIGKAYKKDAKLVMEYLAICDE 524 + ++L H P K + + K + + L LA + Sbjct: 269 TLWNLGDHELLHMYPGNVSK---------LHGRDGRKNVVPCVLSVNGDLDRGMLAYLYD 319 Query: 525 CYITEMEMLLNE----KGEFTIETEGKTFQLTKDMINVKRFQKTLYVEEVVPNVIEPSFG 580 + + + + ++ D+ + + + ++E Sbjct: 320 SFQLTENSFTRKKNLHRKVLKLHPCLAPIKVALDVGRGPTLELRQVCQGLFNELLE---- 375 Query: 581 LGRIMYTVFEHTFHVREGDEQRTFFSFPAVVAPFKCSV 618 +V+ + ++ + + + F V Sbjct: 376 ---NGISVWPGYLETMQSSLEQLYSKYDEMSILFTVLV 410 Score = 50.6 bits (119), Expect = 2e-06, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 62/162 (38%), Gaps = 12/162 (7%) Query: 555 MINVKRFQKTLYVEEVVPNVIEPSFGLGRIMYTVFEHTFHV------REGDEQRTFFSFP 608 NV + + VVP V+ + L R M +F + R+ + R Sbjct: 283 PGNVSKLHGRDGRKNVVPCVLSVNGDLDRGMLAYLYDSFQLTENSFTRKKNLHRKVLKLH 342 Query: 609 AVVAPFKCSV-LPLSQNQEFMPFVKELSEALTRHGV---SHKVDDSSGSIGRRYARTDEI 664 +AP K ++ + E + L L +G+ ++ S+ + Y++ DE+ Sbjct: 343 PCLAPIKVALDVGRGPTLELRQVCQGLFNELLENGISVWPGYLETMQSSLEQLYSKYDEM 402 Query: 665 GVAFGVTIDFDTVNKTPHTATLRDRDSMRQIRAEISELPSIV 706 + F V + T+ LR RD+ + IS+L + Sbjct: 403 SILFTVLVTETTLEN--GLIHLRSRDTTMKEMMHISKLKDFL 442 Score = 50.6 bits (119), Expect = 2e-06, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 62/162 (38%), Gaps = 12/162 (7%) Query: 555 MINVKRFQKTLYVEEVVPNVIEPSFGLGRIMYTVFEHTFHV------REGDEQRTFFSFP 608 NV + + VVP V+ + L R M +F + R+ + R Sbjct: 734 PGNVSKLHGRDGRKNVVPCVLSVNGDLDRGMLAYLYDSFQLTENSFTRKKNLHRKVLKLH 793 Query: 609 AVVAPFKCSV-LPLSQNQEFMPFVKELSEALTRHGV---SHKVDDSSGSIGRRYARTDEI 664 +AP K ++ + E + L L +G+ ++ S+ + Y++ DE+ Sbjct: 794 PCLAPIKVALDVGRGPTLELRQVCQGLFNELLENGISVWPGYLETMQSSLEQLYSKYDEM 853 Query: 665 GVAFGVTIDFDTVNKTPHTATLRDRDSMRQIRAEISELPSIV 706 + F V + T+ LR RD+ + IS+L + Sbjct: 854 SILFTVLVTETTLEN--GLIHLRSRDTTMKEMMHISKLKDFL 893 Score = 49.8 bits (117), Expect = 4e-06, Method: Composition-based stats. Identities = 39/336 (11%), Positives = 85/336 (25%), Gaps = 74/336 (22%) Query: 290 GNMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFR---NEISPRSGLIRVREF 346 G+ LR G ++ L+ +LP+ AQIG F + R+G+ + E Sbjct: 593 GDSAFRLRENLLHGALEHYVNCLDLVNKRLPYGLAQIGVCFHPVFDTKQIRNGVKSIGEK 652 Query: 347 TMAEIEHFVDPSEKDHPKFQNVADLHLYLYSAKAQVSGQSARKMRLGDAVEQGVINNTVL 406 T A + F P + + + Q Sbjct: 653 TEASLVWFTPP--------RTSNQWLDFWLRHRLQ------------------------- 679 Query: 407 GYFIGRIYLYLTKVGISPDKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSC 466 + K +SP + E +G I + Sbjct: 680 ---------WWRKFAMSPSNFSSSDCQDEEGRKGNK----LYYNFPWGKELIE-----TL 721 Query: 467 YDLSCHARATKVPLVAEKPLKEPKTVNVVQFEPSKGAIGKAYKKDAKLVMEYLAICDECY 526 ++L H P K + + K + + L LA + + Sbjct: 722 WNLGDHELLHMYPGNVSK---------LHGRDGRKNVVPCVLSVNGDLDRGMLAYLYDSF 772 Query: 527 ITEMEMLLNE----KGEFTIETEGKTFQLTKDMINVKRFQKTLYVEEVVPNVIEPSFGLG 582 + + + ++ D+ + + + ++E Sbjct: 773 QLTENSFTRKKNLHRKVLKLHPCLAPIKVALDVGRGPTLELRQVCQGLFNELLE------ 826 Query: 583 RIMYTVFEHTFHVREGDEQRTFFSFPAVVAPFKCSV 618 +V+ + ++ + + + F V Sbjct: 827 -NGISVWPGYLETMQSSLEQLYSKYDEMSILFTVLV 861 Score = 34.8 bits (78), Expect = 0.13, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Query: 150 FGPVGCALKNNIIQTWRQH-FIQEEQILEIDCTMLTPEPVL 189 FGP+G L+ N+ W + EQ+ +D P P+L Sbjct: 99 FGPLGVELRKNLAAEWWTSVVVFREQVFPVDALHHKPGPLL 139 Score = 34.8 bits (78), Expect = 0.13, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Query: 150 FGPVGCALKNNIIQTWRQH-FIQEEQILEIDCTMLTPEPVL 189 FGP+G L+ N+ W + EQ+ +D P P+L Sbjct: 551 FGPLGVELRKNLAAEWWTSVVVFREQVFPVDALHHKPGPLL 591 >5C52-B nrPDB Length = 485 Score = 50.6 bits (119), Expect = 2e-06, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 62/162 (38%), Gaps = 12/162 (7%) Query: 555 MINVKRFQKTLYVEEVVPNVIEPSFGLGRIMYTVFEHTFHV------REGDEQRTFFSFP 608 NV + + VVP V+ + L R M +F + R+ + R Sbjct: 316 PGNVSKLHGRDGRKNVVPCVLSVNGDLDRGMLAYLYDSFQLTENSFTRKKNLHRKVLKLH 375 Query: 609 AVVAPFKCSV-LPLSQNQEFMPFVKELSEALTRHGV---SHKVDDSSGSIGRRYARTDEI 664 +AP K ++ + E + L L +G+ ++ S+ + Y++ DE+ Sbjct: 376 PCLAPIKVALDVGRGPTLELRQVCQGLFNELLENGISVWPGYLETMQSSLEQLYSKYDEM 435 Query: 665 GVAFGVTIDFDTVNKTPHTATLRDRDSMRQIRAEISELPSIV 706 + F V + T+ LR RD+ + IS+L + Sbjct: 436 SILFTVLVTETTLEN--GLIHLRSRDTTMKEMMHISKLKDFL 475 Score = 50.2 bits (118), Expect = 3e-06, Method: Composition-based stats. Identities = 39/332 (11%), Positives = 84/332 (25%), Gaps = 74/332 (22%) Query: 294 GYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFR---NEISPRSGLIRVREFTMAE 350 G LR G ++ L+ +LP+ AQIG F + R+G+ + E T A Sbjct: 179 GKLRENLLHGALEHYVNCLDLVNKRLPYGLAQIGVCFHPVFDTKQIRNGVKSIGEKTEAS 238 Query: 351 IEHFVDPSEKDHPKFQNVADLHLYLYSAKAQVSGQSARKMRLGDAVEQGVINNTVLGYFI 410 + F P + + + Q Sbjct: 239 LVWFTPP--------RTSNQWLDFWLRHRLQ----------------------------- 261 Query: 411 GRIYLYLTKVGISPDKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLS 470 + K +SP + E +G I + ++L Sbjct: 262 -----WWRKFAMSPSNFSSSDCQDEEGRKGNK----LYYNFPWGKELIE-----TLWNLG 307 Query: 471 CHARATKVPLVAEKPLKEPKTVNVVQFEPSKGAIGKAYKKDAKLVMEYLAICDECYITEM 530 H P K + + K + + L LA + + Sbjct: 308 DHELLHMYPGNVSK---------LHGRDGRKNVVPCVLSVNGDLDRGMLAYLYDSFQLTE 358 Query: 531 EMLLNE----KGEFTIETEGKTFQLTKDMINVKRFQKTLYVEEVVPNVIEPSFGLGRIMY 586 + + + ++ D+ + + + ++E Sbjct: 359 NSFTRKKNLHRKVLKLHPCLAPIKVALDVGRGPTLELRQVCQGLFNELLE-------NGI 411 Query: 587 TVFEHTFHVREGDEQRTFFSFPAVVAPFKCSV 618 +V+ + ++ + + + F V Sbjct: 412 SVWPGYLETMQSSLEQLYSKYDEMSILFTVLV 443 Score = 36.3 bits (82), Expect = 0.050, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 33/92 (35%), Gaps = 6/92 (6%) Query: 150 FGPVGCALKNNIIQTWRQH-FIQEEQILEIDCTMLTPEPVLKTSGHVDKFADFMVKDVKN 208 FGP+G L+ N+ W + EQ+ +D P P+L A +V Sbjct: 99 FGPLGVELRKNLAAEWWTSVVVFREQVFPVDALHHKPGPLLPGDS-----AFRLVSAETL 153 Query: 209 GECFRADHLLKAHLQKLMSDKKCSVEKKSEME 240 E + L K L + + + K E Sbjct: 154 REILQDKELSKEQLVAFLENVLKTSGKLRENL 185 >3IKM-B nrPDB Length = 427 Score = 50.6 bits (119), Expect = 2e-06, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 62/162 (38%), Gaps = 12/162 (7%) Query: 555 MINVKRFQKTLYVEEVVPNVIEPSFGLGRIMYTVFEHTFHV------REGDEQRTFFSFP 608 NV + + VVP V+ + L R M +F + R+ + R Sbjct: 258 PGNVSKLHGRDGRKNVVPCVLSVNGDLDRGMLAYLYDSFQLTENSFTRKKNLHRKVLKLH 317 Query: 609 AVVAPFKCSV-LPLSQNQEFMPFVKELSEALTRHGV---SHKVDDSSGSIGRRYARTDEI 664 +AP K ++ + E + L L +G+ ++ S+ + Y++ DE+ Sbjct: 318 PCLAPIKVALDVGRGPTLELRQVCQGLFNELLENGISVWPGYLETMQSSLEQLYSKYDEM 377 Query: 665 GVAFGVTIDFDTVNKTPHTATLRDRDSMRQIRAEISELPSIV 706 + F V + T+ LR RD+ + IS+L + Sbjct: 378 SILFTVLVTETTLEN--GLIHLRSRDTTMKEMMHISKLKDFL 417 Score = 50.2 bits (118), Expect = 3e-06, Method: Composition-based stats. Identities = 39/332 (11%), Positives = 84/332 (25%), Gaps = 74/332 (22%) Query: 294 GYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFR---NEISPRSGLIRVREFTMAE 350 G LR G ++ L+ +LP+ AQIG F + R+G+ + E T A Sbjct: 121 GKLRENLLHGALEHYVNCLDLVNKRLPYGLAQIGVCFHPVFDTKQIRNGVKSIGEKTEAS 180 Query: 351 IEHFVDPSEKDHPKFQNVADLHLYLYSAKAQVSGQSARKMRLGDAVEQGVINNTVLGYFI 410 + F P + + + Q Sbjct: 181 LVWFTPP--------RTSNQWLDFWLRHRLQ----------------------------- 203 Query: 411 GRIYLYLTKVGISPDKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLS 470 + K +SP + E +G I + ++L Sbjct: 204 -----WWRKFAMSPSNFSSSDCQDEEGRKGNK----LYYNFPWGKELIE-----TLWNLG 249 Query: 471 CHARATKVPLVAEKPLKEPKTVNVVQFEPSKGAIGKAYKKDAKLVMEYLAICDECYITEM 530 H P K + + K + + L LA + + Sbjct: 250 DHELLHMYPGNVSK---------LHGRDGRKNVVPCVLSVNGDLDRGMLAYLYDSFQLTE 300 Query: 531 EMLLNE----KGEFTIETEGKTFQLTKDMINVKRFQKTLYVEEVVPNVIEPSFGLGRIMY 586 + + + ++ D+ + + + ++E Sbjct: 301 NSFTRKKNLHRKVLKLHPCLAPIKVALDVGRGPTLELRQVCQGLFNELLE-------NGI 353 Query: 587 TVFEHTFHVREGDEQRTFFSFPAVVAPFKCSV 618 +V+ + ++ + + + F V Sbjct: 354 SVWPGYLETMQSSLEQLYSKYDEMSILFTVLV 385 Score = 36.3 bits (82), Expect = 0.050, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 33/92 (35%), Gaps = 6/92 (6%) Query: 150 FGPVGCALKNNIIQTWRQH-FIQEEQILEIDCTMLTPEPVLKTSGHVDKFADFMVKDVKN 208 FGP+G L+ N+ W + EQ+ +D P P+L A +V Sbjct: 41 FGPLGVELRKNLAAEWWTSVVVFREQVFPVDALHHKPGPLLPGDS-----AFRLVSAETL 95 Query: 209 GECFRADHLLKAHLQKLMSDKKCSVEKKSEME 240 E + L K L + + + K E Sbjct: 96 REILQDKELSKEQLVAFLENVLKTSGKLRENL 127 >3IKL-A nrPDB Length = 459 Score = 50.6 bits (119), Expect = 2e-06, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 62/162 (38%), Gaps = 12/162 (7%) Query: 555 MINVKRFQKTLYVEEVVPNVIEPSFGLGRIMYTVFEHTFHV------REGDEQRTFFSFP 608 NV + + VVP V+ + L R M +F + R+ + R Sbjct: 284 PGNVSKLHGRDGRKNVVPCVLSVNGDLDRGMLAYLYDSFQLTENSFTRKKNLHRKVLKLH 343 Query: 609 AVVAPFKCSV-LPLSQNQEFMPFVKELSEALTRHGV---SHKVDDSSGSIGRRYARTDEI 664 +AP K ++ + E + L L +G+ ++ S+ + Y++ DE+ Sbjct: 344 PCLAPIKVALDVGRGPTLELRQVCQGLFNELLENGISVWPGYLETMQSSLEQLYSKYDEM 403 Query: 665 GVAFGVTIDFDTVNKTPHTATLRDRDSMRQIRAEISELPSIV 706 + F V + T+ LR RD+ + IS+L + Sbjct: 404 SILFTVLVTETTLEN--GLIHLRSRDTTMKEMMHISKLKDFL 443 Score = 50.6 bits (119), Expect = 3e-06, Method: Composition-based stats. Identities = 39/337 (11%), Positives = 84/337 (24%), Gaps = 74/337 (21%) Query: 289 GGNMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFR---NEISPRSGLIRVRE 345 G LR G ++ L+ +LP+ AQIG F + R+G+ + E Sbjct: 142 DSAFRGGLRENLLHGALEHYVNCLDLVNKRLPYGLAQIGVCFHPVFDTKQIRNGVKSIGE 201 Query: 346 FTMAEIEHFVDPSEKDHPKFQNVADLHLYLYSAKAQVSGQSARKMRLGDAVEQGVINNTV 405 T A + F P + + + Q Sbjct: 202 KTEASLVWFTPP--------RTSNQWLDFWLRHRLQ------------------------ 229 Query: 406 LGYFIGRIYLYLTKVGISPDKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRS 465 + K +SP + E +G I + Sbjct: 230 ----------WWRKFAMSPSNFSSSDCQDEEGRKGNK----LYYNFPWGKELIE-----T 270 Query: 466 CYDLSCHARATKVPLVAEKPLKEPKTVNVVQFEPSKGAIGKAYKKDAKLVMEYLAICDEC 525 ++L H P K + + K + + L LA + Sbjct: 271 LWNLGDHELLHMYPGNVSK---------LHGRDGRKNVVPCVLSVNGDLDRGMLAYLYDS 321 Query: 526 YITEMEMLLNE----KGEFTIETEGKTFQLTKDMINVKRFQKTLYVEEVVPNVIEPSFGL 581 + + + + ++ D+ + + + ++E Sbjct: 322 FQLTENSFTRKKNLHRKVLKLHPCLAPIKVALDVGRGPTLELRQVCQGLFNELLE----- 376 Query: 582 GRIMYTVFEHTFHVREGDEQRTFFSFPAVVAPFKCSV 618 +V+ + ++ + + + F V Sbjct: 377 --NGISVWPGYLETMQSSLEQLYSKYDEMSILFTVLV 411 Score = 34.8 bits (78), Expect = 0.13, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Query: 150 FGPVGCALKNNIIQTWRQH-FIQEEQILEIDCTMLTPEPVL 189 FGP+G L+ N+ W + EQ+ +D P P+L Sbjct: 99 FGPLGVELRKNLAAEWWTSVVVFREQVFPVDALHHKPGPLL 139 >1G5I-A nrPDB Length = 454 Score = 44.4 bits (103), Expect = 2e-04, Method: Composition-based stats. Identities = 42/344 (12%), Positives = 90/344 (26%), Gaps = 76/344 (22%) Query: 294 GYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFR---NEISPRSGLIRVREFTMAE 350 G LR G ++ L+ KLPF AQIG F N S + RV E T A Sbjct: 137 GKLRATLLHGALEHYVNCLDLVNRKLPFGLAQIGVCFHPVSNSNQTPSSVTRVGEKTEAS 196 Query: 351 IEHFVDPSEKDHPKFQNVADLHLYLYSAKAQVSGQSARKMRLGDAVEQGVINNTVLGYFI 410 + F + + + + Sbjct: 197 LVWF--------TPTRTSSQWLDFWLRHRL------------------------------ 218 Query: 411 GRIYLYLTKVGISPDKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLS 470 L+ K +SP + + +G I + ++L Sbjct: 219 ----LWWRKFAMSPSNFSSADCQDELGRKGSK----LYYSFPWGKEPIE-----TLWNLG 265 Query: 471 CHARATKVPLVAEKPLKEPKTVNVVQ-FEPSKGAIGKAYKKDAKLVMEYLAICDECYITE 529 ++ P V+ +Q + K + + + LA + + Sbjct: 266 ----DQELLHTY------PGNVSTIQGRDGRKNVVPCVLSVSGDVDLGTLAYLYDSFQLA 315 Query: 530 MEMLLN----EKGEFTIETEGKTFQLTKDMINVKRFQKTLYVEEVVPNVIEPSFGLGRIM 585 ++ + ++ D+ + + ++ ++E G + Sbjct: 316 ENSFARKKSLQRKVLKLHPCLAPIKVALDVGKGPTVELRQVCQGLLNELLEN----GISV 371 Query: 586 YTVFEHTFHVREGDEQRTFFSFPAVVAPFKCSVLPLSQNQEFMP 629 + + T H ++ + + F V + + Sbjct: 372 WPGYSETVH---SSLEQLHSKYDEMSVLFSVLVTETTLENGLIQ 412 Score = 42.5 bits (98), Expect = 8e-04, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 59/162 (36%), Gaps = 12/162 (7%) Query: 555 MINVKRFQKTLYVEEVVPNVIEPSFGLGRIMYTVFEHTFHV------REGDEQRTFFSFP 608 NV Q + VVP V+ S + +F + R+ QR Sbjct: 274 PGNVSTIQGRDGRKNVVPCVLSVSGDVDLGTLAYLYDSFQLAENSFARKKSLQRKVLKLH 333 Query: 609 AVVAPFKCSV-LPLSQNQEFMPFVKELSEALTRHGV---SHKVDDSSGSIGRRYARTDEI 664 +AP K ++ + E + L L +G+ + S+ + +++ DE+ Sbjct: 334 PCLAPIKVALDVGKGPTVELRQVCQGLLNELLENGISVWPGYSETVHSSLEQLHSKYDEM 393 Query: 665 GVAFGVTIDFDTVNKTPHTATLRDRDSMRQIRAEISELPSIV 706 V F V + T+ LR RD+ + IS+L + Sbjct: 394 SVLFSVLVTETTLEN--GLIQLRSRDTTMKEMMHISKLRDFL 433 Score = 35.9 bits (81), Expect = 0.056, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 5/67 (7%) Query: 119 VDRAKMEDTLKRRFFYD---QAFAIYGGVSGLY-DFGPVGCALKNNIIQTWRQHF-IQEE 173 V R + D +RR F Q + +SG + FGP+G L+ N+ W + E Sbjct: 22 VAREALVDLCRRRHFLSGTPQQLSTAALLSGCHARFGPLGVELRKNLASQWWSSMVVFRE 81 Query: 174 QILEIDC 180 Q+ +D Sbjct: 82 QVFAVDS 88 >1NJ2-A nrPDB Length = 501 Score = 42.5 bits (98), Expect = 7e-04, Method: Composition-based stats. Identities = 41/178 (23%), Positives = 73/178 (41%), Gaps = 18/178 (10%) Query: 541 TIETEGKTFQLTKDMINVKRFQKTLYVEEVVPN-----VIEPSFGL-GRIMYTVFEHTFH 594 T+ +GKT Q+ + F +T ++ P V + +GL R++ +V Sbjct: 243 TLMPDGKTLQIGTVHNLGQTFARTFEIKFETPEGDHEYVHQTCYGLSDRVIASVI----- 297 Query: 595 VREGDEQRTFFSFPAVVAPFKCSVLPLSQN---QEFMPFVKELSEALTRHGVSHKVDDSS 651 GDE P VA + ++P+ +E M +EL L G +DD Sbjct: 298 AIHGDESGLCL--PPDVAAHQVVIVPIIFKKAAEEVMEACRELRSRLEAAGFRVHLDDRD 355 Query: 652 GSIGRRYARTDEIGVAFGVTIDFDTVNKTPHTATLRDRDSMRQIRAEISELPSIVQDL 709 GR+Y + GV V I + K A + RD+ ++ A++ + +++L Sbjct: 356 IRAGRKYYEWEMRGVPLRVEIGPRDLEK--GAAVISRRDTGEKVTADLQGIEETLREL 411 Score = 29.4 bits (64), Expect = 6.3, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Query: 296 LRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFV 355 LRP + ++ F L + LP Q+ N+FR E LIRVRE T + H + Sbjct: 134 LRPTSETVMYPMFA-LWVRSHTDLPMRFYQVVNTFRYETKHTRPLIRVREITTFKEAHTI 192 Query: 356 DPSEKD 361 + + Sbjct: 193 HATASE 198 >1NYR-A nrPDB Length = 645 Score = 36.7 bits (83), Expect = 0.039, Method: Composition-based stats. Identities = 33/148 (22%), Positives = 59/148 (39%), Gaps = 9/148 (6%) Query: 317 GKLPFAAAQIGNSFRNEIS-PRSGLIRVREFTMAEIEHFVDPSEKDHPKFQNVADLHLYL 375 +LP A++G R E S SGL RVR T+ + FV P ++ +F+ V ++ + + Sbjct: 351 RELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRP-DQIKEEFKRVVNMIIDV 409 Query: 376 YSAKAQVSGQSARKMRLGDAVEQGVINNTVLGYFIGRIYLYLTKVGISPDKLRFRQHMEN 435 Y R + E+ ++ + + ++G+S + Sbjct: 410 YKDFGFEDYSFRLSYRDPEDKEKYFDDDDMWNKAENMLKEAADELGLS------YEEAIG 463 Query: 436 EMAHYACDCWDAESKTSYGWIEIVGCAD 463 E A Y D + KT+ G E + A Sbjct: 464 EAAFYGPK-LDVQVKTAMGKEETLSTAQ 490 >3IAL-A nrPDB Length = 518 Score = 35.9 bits (81), Expect = 0.071, Method: Composition-based stats. Identities = 36/172 (20%), Positives = 57/172 (33%), Gaps = 11/172 (6%) Query: 296 LRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFV 355 LRP + I+ F + + LP Q FR+E LIRVRE E Sbjct: 119 LRPTSETAIYSMFSK-WVRSYKDLPLKIHQTCTIFRHETKNTKPLIRVREIHWNEAHCCH 177 Query: 356 DPSEKDHPKFQNVADLHLYLYSAKAQVSGQSARKMRLGDAVEQGVINNTVLGYFIGRIYL 415 +E + + + ++S + GQ R++ + + GR+ Sbjct: 178 ATAEDAVSQLSDYWKVIDTIFSDELCFKGQKLRRVCWDRFPGADYSEVSDVVMPCGRV-- 235 Query: 416 YLTKVGISPDKLRF-------RQHMENEMAHYACDCWDAESKTSYGWIEIVG 460 L GI RF + NE H C ++ + I G Sbjct: 236 -LQTAGIHNLGQRFSSTFDILYANKANESVHPYLTCAGISTRVLACALSIHG 286 >1QF6-A nrPDB Length = 642 Score = 35.5 bits (80), Expect = 0.075, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 53/152 (34%), Gaps = 8/152 (5%) Query: 204 KDVKNGECFRADHLLKAHLQKLMSDKKCSVEKKSEMESVLAQLDNYGQQELADLFVNYNV 263 K G+ H+ + + + V ++L Y QE+ F+ V Sbjct: 243 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRV 302 Query: 264 KSPITGNDLSPPVSFNLMFKTFIGPGGNMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAA 323 TG+ N F N ++P G F + L+ LP Sbjct: 303 LWEKTGH------WDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSY-RDLPLRM 355 Query: 324 AQIGNSFRNEISPR-SGLIRVREFTMAEIEHF 354 A+ G+ RNE S GL+RVR FT + F Sbjct: 356 AEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIF 387 >4HWO-A nrPDB Length = 411 Score = 35.5 bits (80), Expect = 0.085, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 53/152 (34%), Gaps = 8/152 (5%) Query: 204 KDVKNGECFRADHLLKAHLQKLMSDKKCSVEKKSEMESVLAQLDNYGQQELADLFVNYNV 263 K G+ H+ + + + V ++L Y QE+ F+ V Sbjct: 4 DHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRV 63 Query: 264 KSPITGNDLSPPVSFNLMFKTFIGPGGNMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAA 323 TG+ N F N ++P G F + L+ LP Sbjct: 64 LWEKTGH------WDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSY-RDLPLRM 116 Query: 324 AQIGNSFRNEISPR-SGLIRVREFTMAEIEHF 354 A+ G+ RNE S GL+RVR FT + F Sbjct: 117 AEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIF 148 >2J3M-A nrPDB Length = 572 Score = 35.2 bits (79), Expect = 0.096, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 29/66 (43%) Query: 285 FIGPGGNMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVR 344 + N Y+ T + F R + +LP QI +R+E RSGL+R R Sbjct: 94 YRLKDRNDRDYILGPTHEETFTELIRDEINSYKRLPLNLYQIQTKYRDEKRSRSGLLRGR 153 Query: 345 EFTMAE 350 EF M + Sbjct: 154 EFIMKD 159 >5OFQ-A nrPDB Length = 409 Score = 35.2 bits (79), Expect = 0.11, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 12/78 (15%) Query: 147 LYDFGPVGCALKN-NIIQTWRQHFIQEEQILEIDC-----------TMLTPEPVLKTSGH 194 ++D+ V LKN ++ + R ++E IL +D TP + GH Sbjct: 54 VFDYETVKYILKNPSLFSSKRAMEERQESILMMDPPKHTKLRNLVNKAFTPRAIQHLEGH 113 Query: 195 VDKFADFMVKDVKNGECF 212 +++ AD+++ +V + E F Sbjct: 114 IEEIADYLLDEVSSKEKF 131 >5XIP-A nrPDB Length = 498 Score = 34.4 bits (77), Expect = 0.19, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 33/94 (35%), Gaps = 1/94 (1%) Query: 296 LRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFV 355 +RP + ++ + + + + LP Q N R E + +R REF E Sbjct: 107 IRPTSETIMYPAYAKWIRSH-RDLPLKLNQWNNVVRWEFKQPTPFLRTREFLWQEGHTAH 165 Query: 356 DPSEKDHPKFQNVADLHLYLYSAKAQVSGQSARK 389 E+ + + +L+ Y V K Sbjct: 166 ATEEEAYTLVLEILELYRQWYEDYLAVPVIKGEK 199 >4YYE-A nrPDB Length = 460 Score = 34.0 bits (76), Expect = 0.24, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 58/165 (35%), Gaps = 12/165 (7%) Query: 281 MFKTFIGPGGNMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEIS-PRSG 339 MFK L+P G L F + + + +LP + RNE S SG Sbjct: 111 MFKVETTDEEKEEYGLKPMNCPGHCLIFGKK-DRSYNELPLRFSDFSPLHRNEASGALSG 169 Query: 340 LIRVREFTMAEIEHFVDPSEKDHPKFQNVADLHLYLYSAKAQVSGQSARKMRLGDAVEQG 399 L R+R+F + F PS+ F ++ + + K G Sbjct: 170 LTRLRKFHQDDGHIFCTPSQVKSEIFNSLKLIDIVY------NKIFPFVKGGSGAESNYF 223 Query: 400 VINNTVLGYFIGRIYLYLTKVGISPDKL----RFRQHMENEMAHY 440 + +T +FIG + ++ + + L + + + A Y Sbjct: 224 INFSTRPDHFIGDLKVWNHAEQVLKEILEESGKPWKLNPGDGAFY 268 >3IS0-X nrPDB Length = 429 Score = 33.2 bits (74), Expect = 0.38, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 36/118 (30%), Gaps = 8/118 (6%) Query: 609 AVVAPFKCSVLPLSQNQEFMPFVKELSEALTRHGVSHKVDDSSGSIGRRYARTDEIG--- 665 +P + V + N +F LT+ + +S GS +G Sbjct: 198 KFTSPDEIEVYKVLNNSQFRDSFSPDYANLTQVRNPKIIINSDGSATVDLGDIGTLGYII 257 Query: 666 -VAFGVTIDFDTVNKTPHTATLRDRDSMRQIRAEISELPSIVQDLAN----GNITWAD 718 DF + T + + R RA S + + +LA G W D Sbjct: 258 RSKPNTLPDFSGIGVLKSEYTFTNNKNQRDTRAHASSIQFVRAELAGFGGFGGYVWFD 315 >4NCX-A nrPDB Length = 506 Score = 32.1 bits (71), Expect = 0.81, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 35/103 (33%), Gaps = 4/103 (3%) Query: 296 LRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFV 355 +RP + ++ F + + LP Q R E + IR REF E Sbjct: 116 IRPTSETIMYSVFPK-WIRSYRDLPLKLNQWNTVVRWEFKQPTPFIRTREFLWQEGHTAH 174 Query: 356 DPSEKDHPKFQNVADLHLYLYSAKAQV---SGQSARKMRLGDA 395 E+ ++ DL+ Y V G + + G A Sbjct: 175 KNEEEAVKLVFDILDLYRRWYEEYLAVPIIKGIKSEGEKFGGA 217 >5F9Y-A nrPDB Length = 511 Score = 32.1 bits (71), Expect = 0.92, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 7/107 (6%) Query: 608 PAVVAPFKCSVLPLSQNQEFMPFVKELSE----ALTRHGVSHKVDDSSG-SIGRRYARTD 662 P VAP + ++P+ K++ L + GV K+DD S + G +Y + Sbjct: 296 PPKVAPVQVIIIPIIFKTVITEEQKKICNEVECILKKAGVRVKIDDRSNYTPGWKYNHWE 355 Query: 663 EIGVAFGVTIDFDTVNKTPHTATLRDRDSMRQIRAEISELPSIVQDL 709 GV + + K +RD +M ++ ISEL S + L Sbjct: 356 VKGVCLRFEVGPRDIEKRSVRVVVRD--NMEKMDIPISELESKIPKL 400 >4P3N-A nrPDB Length = 415 Score = 31.7 bits (70), Expect = 1.1, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 2/60 (3%) Query: 296 LRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEIS-PRSGLIRVREFTMAEIEHF 354 L+P G L F + +LP A G RNE+S +GL RVR F + F Sbjct: 100 LKPMNCPGHCLMFDHR-PRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIF 158 >2I4O-A nrPDB Length = 458 Score = 31.7 bits (70), Expect = 1.1, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 21/45 (46%) Query: 310 RLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHF 354 R + LP I FR+E PR G++R REF M + F Sbjct: 139 RAYIKSYKSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSF 183 >6NAB-A nrPDB Length = 513 Score = 31.3 bits (69), Expect = 1.8, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 36/99 (36%), Gaps = 1/99 (1%) Query: 291 NMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAE 350 P LRP + ++ ++ + ++ + LP Q N R E IR REF E Sbjct: 111 QEPIALRPTSETIMYPSYAKWIQSH-RDLPLKLNQWTNVVRWEFKHAVPFIRSREFYWQE 169 Query: 351 IEHFVDPSEKDHPKFQNVADLHLYLYSAKAQVSGQSARK 389 E+ + + +L+ +Y V K Sbjct: 170 GHSAFKSKEEADEEVFTILELYKRVYEELLAVPVIKGTK 208 >3NRG-A nrPDB Length = 217 Score = 30.9 bits (68), Expect = 1.8, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 42/125 (33%), Gaps = 13/125 (10%) Query: 349 AEIEHFVDPSEKDHPKFQNVADLHLYLYSAKAQVSGQSARKMRLGDAVEQGVINNTVLGY 408 E F + E+ + +V L AQ S R+ + G+ + Y Sbjct: 2 MPTETFFNLPEEKRSRLIDV------LLDEFAQNDYDSVSINRITE--RAGIAKGSFYQY 53 Query: 409 FIGR--IYLYLTKVGISPDKLRFRQHMENE---MAHYACDCWDAESKTSYGWIEIVGCAD 463 F + YLYL ++GI RQ M Y D + + + A Sbjct: 54 FADKKDCYLYLIQLGIEQKTAFLRQTPPASTTDMFAYLRWLLDVGIQFQFHNPRLAQIAY 113 Query: 464 RSCYD 468 ++ YD Sbjct: 114 KALYD 118 >1BBU-A nrPDB Length = 504 Score = 30.9 bits (68), Expect = 1.9, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 39/97 (40%), Gaps = 8/97 (8%) Query: 540 FTIETEGKTFQLTKDMINVKRFQKTLYVEEVVPNVIEPSFGLGRIMYTVFEHTFHVREGD 599 T+ K ++ DM ++ F + E + +E S+GLGRI+ +FE Sbjct: 326 LTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEVAE----- 380 Query: 600 EQRTFFSFPAVVAPFKCSVLPLSQNQEFMPFVKELSE 636 P + + V PL++ + P + + E Sbjct: 381 ---AHLIQPTFITEYPAEVSPLARRNDVNPEITDRFE 414 >5OFN-A nrPDB Length = 330 Score = 30.5 bits (67), Expect = 2.6, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 52/133 (39%), Gaps = 17/133 (12%) Query: 557 NVKRFQKTLYVEEVVPNVIEPSFGLGRIMYTVFEHTFHVREGDEQRTFFS-----FPAVV 611 NV+ + E + +E + R + + E F ++ + +FS V Sbjct: 132 NVETLEYVEMTSECIKRGLEQT----RNLVEILEDDFGLKP----KVYFSGNRGFHVQVD 183 Query: 612 APFKCSVLPLSQNQEFMPFVKELSEALTRHGVSHKVDDSSGSIGRRYARTDEIGVAFGVT 671 C++L + +E +V + G +++ G +GR+ + + + VT Sbjct: 184 CYGNCALLDSDERKEIAEYVMGIGVP----GYPGGSENAPGWVGRKNRGINGVTIDEQVT 239 Query: 672 IDFDTVNKTPHTA 684 ID + + P++ Sbjct: 240 IDVKRLIRIPNSL 252 >5XIG-A nrPDB Length = 500 Score = 30.5 bits (67), Expect = 2.6, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 39/113 (34%), Gaps = 2/113 (1%) Query: 296 LRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFV 355 +RP + ++ + + + + LP Q + R E + +R REF E Sbjct: 106 IRPTSETIMYPAYAKWIRSH-RDLPLKLNQWCSVVRWEFKQPTPFLRTREFLWQEGHTAH 164 Query: 356 DPSEKDHPKFQNVADLHLYLYSAKAQVSGQSARKMRLGDAVEQGVINNTVLGY 408 E+ ++ +L+ Y V K G+ G TV + Sbjct: 165 ATEEEAWELVLDILELYRRWYEECLAVPVIKGEKSE-GEKFAGGKKTTTVEAF 216 >1LYL-A nrPDB Length = 504 Score = 30.5 bits (67), Expect = 2.9, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 45/123 (36%), Gaps = 8/123 (6%) Query: 514 LVMEYLAICDECYITEMEMLLNEKGEFTIETEGKTFQLTKDMINVKRFQKTLYVEEVVPN 573 L E L Y + + T+ K ++ DM ++ F + E + Sbjct: 300 LAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGI 359 Query: 574 VIEPSFGLGRIMYTVFEHTFHVREGDEQRTFFSFPAVVAPFKCSVLPLSQNQEFMPFVKE 633 +E S+GLGRI+ +F+ P + + V PL++ + P + + Sbjct: 360 TVEKSWGLGRIVTEIFDEVAE--------AHLIQPTFITEYPAEVSPLARRNDVNPEITD 411 Query: 634 LSE 636 E Sbjct: 412 RFE 414 >3DO8-A nrPDB Length = 148 Score = 30.1 bits (66), Expect = 3.2, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 2/73 (2%) Query: 497 FEPSKGAIGKAYKKDAKLVMEYLAICDECYITEMEMLLNEKGEFTIETEGKTFQLTKDMI 556 FEP I Y K + EYL + E Y EM + +N+K E + + ++ M Sbjct: 68 FEPEIVKITNPYGKTLDVDFEYLVVSPETY--EMALKINQKREELGKRKITIVKVDWMMA 125 Query: 557 NVKRFQKTLYVEE 569 + + ++ Sbjct: 126 EDGKPISSTRIKR 138 >6H9X-A nrPDB Length = 430 Score = 30.1 bits (66), Expect = 3.3, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 25/64 (39%), Gaps = 4/64 (6%) Query: 300 TAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISP----RSGLIRVREFTMAEIEHFV 355 TA+ N R ++ LP FR+E GLIR+ +F E+ V Sbjct: 237 TAEVPLTNLVRDEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIV 296 Query: 356 DPSE 359 P + Sbjct: 297 RPED 300 >6AH3-B nrPDB Length = 875 Score = 29.8 bits (65), Expect = 4.5, Method: Composition-based stats. Identities = 25/163 (15%), Positives = 57/163 (34%), Gaps = 25/163 (15%) Query: 303 GIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEIS----PRSGLIRV----REFTMAEIEHF 354 G +NF+++ + + KLP + +IG+ F ++ R+G+ + + + + + Sbjct: 630 GKRINFEKIKDIHNTKLPAYSGEIGDFFSSDWRFLQILRNGIDYLQRNDKTLELMDSKKT 689 Query: 355 VDPSEKDHPKFQNVADLHLYLYSAKAQVSGQSAR-----------------KMRLGDAVE 397 + + V D+ + +A+ S + +V Sbjct: 690 GQFNAQGVRDINCVNDVLEFCKDYEAKTKAMSLSIEENIPVALCKNRKCQFRTPDSISVN 749 Query: 398 QGVINNTVLGYFIGRIYLYLTKVGISPDKLRFRQHMENEMAHY 440 + T I + L + G D R Q E ++ H+ Sbjct: 750 SSSFSLTFFPRCIIAVSCTLLERGHPKDNARIYQVPEKDLEHW 792 >3TA0-A nrPDB Length = 118 Score = 29.4 bits (64), Expect = 5.6, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 6/80 (7%) Query: 527 ITEMEMLLNEKGEFTIETEGKTFQL-----TKDMINVKRFQKTLYVEEVVPNVIEPSFGL 581 +TE++ +KG ++ G+ ++ TK + V VE +V + FG Sbjct: 30 VTEVKGRGEQKGI-RLQFRGREVEVDLLQKTKVEVVVSDDAVDEVVEAIVSSARTGKFGD 88 Query: 582 GRIMYTVFEHTFHVREGDEQ 601 GRI E + +R GDE+ Sbjct: 89 GRIFVIPVEKSVKIRTGDEE 108 >1MKY-A nrPDB Length = 439 Score = 29.4 bits (64), Expect = 6.0, Method: Composition-based stats. Identities = 29/194 (14%), Positives = 59/194 (30%), Gaps = 26/194 (13%) Query: 536 EKGEFTIETEGKTF--QLTKD-MINVKRFQ-KTLYVEEVVPNVIEPSFG----------- 580 ++G + F + T D ++ + + + EV P + FG Sbjct: 92 KRGITKEDESLADFLRKSTVDTILVANKAENLREFEREVKPELYSLGFGEPIPVSAEHNI 151 Query: 581 -LGRIMYTVFEHTFHVREGDEQRTFFSFPAVVAPFKCSVL--PLSQNQEFMPFVKELSEA 637 L ++ T+ + E + P + K +++ P + A Sbjct: 152 NLDTMLETIIKKLEEKGLDLESK-----PEITDAIKVAIVGRPNVGKSTLFNAILNKERA 206 Query: 638 LTRH---GVSHKVDDSSGSIGRRYARTDEIGVAFGVTIDFDTVNKTPHTATLRDRDSMRQ 694 L VDD GR+Y D G+ ++ TV K + + + Sbjct: 207 LVSPIPGTTRDPVDDEVFIDGRKYVFVDTAGLRRKSRVEPRTVEKYSNYRVVDSIEKADV 266 Query: 695 IRAEISELPSIVQD 708 + + I + Sbjct: 267 VVIVLDATQGITRQ 280 >3TW9-A nrPDB Length = 442 Score = 29.4 bits (64), Expect = 6.5, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 31/81 (38%), Gaps = 7/81 (8%) Query: 286 IGPGGNMPG-YLRPET-AQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRV 343 P PG Y P+ A+ + RL + + KL F I + ++P + + Sbjct: 208 RSPRSKTPGIYFDPDAYAKSV----PRLFDHLRNKLGFGIEFI-HDVHERVTPVTAINLA 262 Query: 344 REFTMAEIEHFVDPSEKDHPK 364 + ++ + DP ++ Sbjct: 263 KTLEQYQLFYLEDPVAPENID 283 >2ZR2-A nrPDB Length = 455 Score = 29.0 bits (63), Expect = 7.0, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 34/116 (29%), Gaps = 5/116 (4%) Query: 282 FKTFIGPGGNMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISP----R 337 F+ I + YL P TA+ + LP + FR E Sbjct: 235 FEDVIYKVEDEDLYLIP-TAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEAGTAGKDT 293 Query: 338 SGLIRVREFTMAEIEHFVDPSEKDHPKFQNVADLHLYLYSAKAQVSGQSARKMRLG 393 G+ RV +F E + P E + + + + + LG Sbjct: 294 KGIFRVHQFHKVEQFVYSRPEESWEWHEKIIRNAEELFQELEIPYRVVNICTGDLG 349 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.312 0.124 0.320 Lambda K H 0.267 0.0380 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 25,179,035 Number of Sequences: 36641 Number of extensions: 974672 Number of successful extensions: 2889 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 29 Number of HSP's successfully gapped in prelim test: 29 Number of HSP's that attempted gapping in prelim test: 2753 Number of HSP's gapped (non-prelim): 104 length of query: 739 length of database: 10,336,785 effective HSP length: 104 effective length of query: 635 effective length of database: 6,526,121 effective search space: 4144086835 effective search space used: 4144086835 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 63 (29.0 bits)