BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P41227 (235 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6C9M-B nrPDB 489 e-139 4HNX-B nrPDB 169 7e-43 5C88-A nrPDB 100 5e-22 5K04-B nrPDB 63 9e-11 4PV6-C nrPDB 54 4e-08 2PSW-A nrPDB 44 7e-05 5HGZ-A nrPDB 35 0.039 3JVN-A nrPDB 32 0.27 5US1-A nrPDB 30 0.70 4ZM6-A nrPDB 30 0.72 5WB0-F nrPDB 30 0.73 4FDG-B nrPDB 30 1.1 3F9V-A nrPDB 30 1.2 3BWG-A nrPDB 29 1.5 2O1M-A nrPDB 29 1.6 2VHI-A nrPDB 29 1.6 4I8O-A nrPDB 28 3.9 2E8Y-A nrPDB 27 5.6 1YW6-A nrPDB 27 5.7 1VHS-A nrPDB 27 6.2 4MI4-A nrPDB 27 8.6 4NCZ-A nrPDB 27 9.4 1YX0-A nrPDB 27 9.4 >6C9M-B nrPDB Length = 236 Score = 489 bits (1258), Expect = e-139, Method: Compositional matrix adjust. Identities = 235/235 (100%), Positives = 235/235 (100%) Query: 1 MNIRNARPEDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIAEDENGKIVGYVLAKM 60 MNIRNARPEDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIAEDENGKIVGYVLAKM Sbjct: 2 MNIRNARPEDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIAEDENGKIVGYVLAKM 61 Query: 61 EEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAALH 120 EEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAALH Sbjct: 62 EEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAALH 121 Query: 121 LYSNTLNFQISEVEPKYYADGEDAYAMKRDLTQMADELRRHLELKEKGRHVVLGAIENKV 180 LYSNTLNFQISEVEPKYYADGEDAYAMKRDLTQMADELRRHLELKEKGRHVVLGAIENKV Sbjct: 122 LYSNTLNFQISEVEPKYYADGEDAYAMKRDLTQMADELRRHLELKEKGRHVVLGAIENKV 181 Query: 181 ESKGNSPPSSGEACREEKGLAAEDSGGDSKDLSEVSETTESTDVKDSSEASDSAS 235 ESKGNSPPSSGEACREEKGLAAEDSGGDSKDLSEVSETTESTDVKDSSEASDSAS Sbjct: 182 ESKGNSPPSSGEACREEKGLAAEDSGGDSKDLSEVSETTESTDVKDSSEASDSAS 236 >4HNX-B nrPDB Length = 248 Score = 169 bits (429), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 92/192 (47%), Positives = 118/192 (61%), Gaps = 41/192 (21%) Query: 1 MNIRNARPEDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIA------------EDE 48 +NIR A D++ MQ+ NL LPENY MKYY YH LSWP+ S++A +DE Sbjct: 3 INIRRATINDIICMQNANLHNLPENYMMKYYMYHILSWPEASFVATTTTLDCEDSDEQDE 62 Query: 49 NG--------------------------KIVGYVLAKMEEDPD---DVPHGHITSLAVKR 79 N K+VGYVL KM +DPD + P+GHITSL+V R Sbjct: 63 NDKLELTLDGTNDGRTIKLDPTYLAPGEKLVGYVLVKMNDDPDQQNEPPNGHITSLSVMR 122 Query: 80 SHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAALHLYSNTLNFQISEVEPKYYA 139 ++RR+G+A+ LM QA A+ E A+YVSLHVR+SNRAALHLY +TL F++ +E YY Sbjct: 123 TYRRMGIAENLMRQALFALREVHQAEYVSLHVRQSNRAALHLYRDTLAFEVLSIEKSYYQ 182 Query: 140 DGEDAYAMKRDL 151 DGEDAYAMK+ L Sbjct: 183 DGEDAYAMKKVL 194 >5C88-A nrPDB Length = 173 Score = 100 bits (249), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 59/158 (37%), Positives = 89/158 (56%), Gaps = 9/158 (5%) Query: 1 MNIRNARPEDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIAEDENGKIVGYVLAKM 60 +RNAR +D+ + N L LPENY Y+F L L++ + +VGY++ ++ Sbjct: 12 FTLRNARMDDIDQIIKINRLTLPENYPY-YFFVEHLKEYGLAFFVAIVDNSVVGYIMPRI 70 Query: 61 E-------EDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRK 113 E + P V GH+ S+AV +RR G+A L++ + ++M ++NA+ + L VR Sbjct: 71 EWGFSNIKQLPSLVRKGHVVSIAVLEEYRRKGIATTLLEASMKSMKNDYNAEEIYLEVRV 130 Query: 114 SNRAALHLYSNTLNFQISEVEPKYYADGEDAYAMKRDL 151 SN A+ LY LNF+ +V YYADGEDAY M R L Sbjct: 131 SNYPAIALYEK-LNFKKVKVLKGYYADGEDAYLMARPL 167 >5K04-B nrPDB Length = 170 Score = 63.2 bits (152), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 15/163 (9%) Query: 2 NIRNARPEDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIA-EDENGKIVGYVLAKM 60 +I+ + EDL + NL L EN+ + +Y + + WPQL Y + E NG+ GY++AK Sbjct: 3 SIKPFQMEDLFELNPVNLDPLTENFNVSFYSQYLIEWPQLFYKSVETPNGQASGYMMAKT 62 Query: 61 E-EDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAAL 119 E + H HIT++ V +RR+GLA KL + + + + ++ L V+ +N Sbjct: 63 EGQLSKKEWHTHITAVTVLDQYRRIGLASKLCLELEN-LTQVKDTLFIDLFVKVTNTLGR 121 Query: 120 HLYSNTLNFQISEVEPKYYA-----------DGEDAYAMKRDL 151 LY L + + YY D DA+ M++ L Sbjct: 122 ILYEK-LGYSVFRRVVGYYGREIQKDRNKIDDSVDAFDMRKLL 163 >4PV6-C nrPDB Length = 162 Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 7/148 (4%) Query: 2 NIRNARPEDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIAEDENGKIVGYVLAKME 61 IR P+D+ ++ L E Y WP+ S++ G +VG+++ Sbjct: 12 TIREFSPKDIESVYRIAQTSLTEYYTQALILDLHREWPE-SFMVYTVAGSVVGFIVGSKY 70 Query: 62 EDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAALHL 121 + I AV RR+G+ LMD A ++ N V L VR N A+ Sbjct: 71 SRTE----ARILLFAVDERFRRMGVGSALMD-AFLSLCREQNMLSVRLEVRTDNDEAIRF 125 Query: 122 YSNTLNFQISEVEPKYYADGEDAYAMKR 149 Y F I+ + P YY+D +AY M R Sbjct: 126 YKK-YGFVITAMLPNYYSDSSNAYTMWR 152 >2PSW-A nrPDB Length = 170 Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 6/149 (4%) Query: 5 NARPEDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIAEDENGKIVGYVLAKMEEDP 64 + P ++ ++ N + P +Y K+Y L +L+ +A N VG V +++ Sbjct: 11 DVTPHNIKQLKRLNQVIFPVSYNDKFY-KDVLEVGELAKLAY-FNDIAVGAVCCRVDHSQ 68 Query: 65 DDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAALHLYSN 124 + +I +L +RRLG+ K+++ ++ + LHV+ SN +A+ Y Sbjct: 69 NQ-KRLYIMTLGCLAPYRRLGIGTKMLNHVLNICEKDGTFDNIYLHVQISNESAIDFYR- 126 Query: 125 TLNFQISEVEPKYYADGE--DAYAMKRDL 151 F+I E + YY E DA+ ++++L Sbjct: 127 KFGFEIIETKKNYYKRIEPADAHVLQKNL 155 >5HGZ-A nrPDB Length = 243 Score = 34.7 bits (78), Expect = 0.039, Method: Compositional matrix adjust. Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 22/115 (19%) Query: 44 IAEDENGKIVGYVLAKME-------EDPD--------DVPHGHITSLAVKRSHRRLGLAQ 88 +A G IVG ++A+++ ED D D +I SL V + R+ G+ Sbjct: 56 LAATYRGAIVGMIVAEIKNRTKIHKEDGDILASNFSVDTQVAYILSLGVVKEFRKHGIGS 115 Query: 89 KLM----DQASRAMIENFNAKYVSLHVRKSNRAALHLYSNTLNFQISEVEPKYYA 139 L+ D S ++ A Y LHV +N A++ Y N +F+ P YY+ Sbjct: 116 LLLESLKDHISTTAQDHCKAIY--LHVLTTNNTAINFYENR-DFKQHHYLPYYYS 167 >3JVN-A nrPDB Length = 166 Score = 31.6 bits (70), Expect = 0.27, Method: Compositional matrix adjust. Identities = 21/86 (24%), Positives = 44/86 (51%), Gaps = 4/86 (4%) Query: 41 LSYIAEDEN---GKIVGYVLAKMEEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRA 97 + Y+AE ++ G I G+ + V I L +++ +RR G+A++LM + + Sbjct: 57 MVYVAEMDDVIIGFITGHFCELISTVSKLVMMATIDELYIEKEYRREGVAEQLMMRIEQE 116 Query: 98 MIENFNAKYVSLHVRKSNRAALHLYS 123 + +++ K + + V N+ AL Y+ Sbjct: 117 L-KDYGVKEIFVEVWDFNKGALEFYN 141 >5US1-A nrPDB Length = 189 Score = 30.4 bits (67), Expect = 0.70, Method: Compositional matrix adjust. Identities = 16/61 (26%), Positives = 34/61 (55%), Gaps = 3/61 (4%) Query: 51 KIVGYVLA---KMEEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYV 107 K+VG+V M D + G++ ++ V++S+RR G+ ++LM Q ++ + + + Sbjct: 65 KLVGHVAIIQRHMALDNTPISVGYVEAMVVEQSYRRQGIGRQLMLQTNKIIASCYQLGLL 124 Query: 108 S 108 S Sbjct: 125 S 125 >4ZM6-A nrPDB Length = 858 Score = 30.4 bits (67), Expect = 0.72, Method: Compositional matrix adjust. Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 44 IAEDENGKIVGYVLAKMEEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQA 94 +A D GKIVG+V ++ D+ HG + L V S++ G+ L D A Sbjct: 586 VARDSQGKIVGFVATQIVV-VDNKKHGQLMLLMVSPSYQGKGVGTLLHDAA 635 >5WB0-F nrPDB Length = 542 Score = 30.4 bits (67), Expect = 0.73, Method: Compositional matrix adjust. Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 24/115 (20%) Query: 72 ITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAALHLYSNTLNFQIS 131 I SL + H GL + ++++ + E + L V ++ Y+N ++ Sbjct: 8 IFSLLITPQH---GLKESYLEESCSTITEGY------LSVLRTG-----WYTNVFTLEVG 53 Query: 132 EVEPKYYADGEDAYAMKRDLTQ---------MADELRRHLELKE-KGRHVVLGAI 176 +VE ADG + DLT+ AD+L R +++ + R VLGAI Sbjct: 54 DVENLTCADGPSLIKTELDLTKSALRELRTVSADQLAREEQIENPRRRRFVLGAI 108 >4FDG-B nrPDB Length = 692 Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust. Identities = 31/148 (20%), Positives = 58/148 (39%), Gaps = 20/148 (13%) Query: 48 ENGKIVGYVLAKMEEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQA---SRAMIENFNA 104 E K++ + A ++E P++VP G + + L L+D A R + Sbjct: 191 EKTKLIDWQKAVIQERPEEVPSGQLP------RQLEIILEDDLVDSARPGDRVKVTGILD 244 Query: 105 KYVSLHVRKSNRAALHLYSNTLNFQIS-----------EVEPKYYADGEDAYAMKRDLTQ 153 V++ +RA +Y + ++S E E K +D + R ++ Sbjct: 245 IKQDSPVKRGSRAVFDIYMKVSSIEVSQKVLDEVIISEEDEKKIKDLAKDPWIRDRIISS 304 Query: 154 MADELRRHLELKEKGRHVVLGAIENKVE 181 +A + H ELKE + G + +E Sbjct: 305 IAPSIYGHWELKEALALALFGGVPKVLE 332 >3F9V-A nrPDB Length = 595 Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust. Identities = 31/148 (20%), Positives = 58/148 (39%), Gaps = 20/148 (13%) Query: 48 ENGKIVGYVLAKMEEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQA---SRAMIENFNA 104 E K++ + A ++E P++VP G + + L L+D A R + Sbjct: 179 EKTKLIDWQKAVIQERPEEVPSGQLP------RQLEIILEDDLVDSARPGDRVKVTGILD 232 Query: 105 KYVSLHVRKSNRAALHLYSNTLNFQIS-----------EVEPKYYADGEDAYAMKRDLTQ 153 V++ +RA +Y + ++S E E K +D + R ++ Sbjct: 233 IKQDSPVKRGSRAVFDIYMKVSSIEVSQKVLDEVIISEEDEKKIKDLAKDPWIRDRIISS 292 Query: 154 MADELRRHLELKEKGRHVVLGAIENKVE 181 +A + H ELKE + G + +E Sbjct: 293 IAPSIYGHWELKEALALALFGGVPKVLE 320 >3BWG-A nrPDB Length = 239 Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 7/90 (7%) Query: 79 RSHRRLGLAQKLMDQASRAMIENFN--AKYVSLHVRKSNRAALHLYSNTLNFQISEVEPK 136 R H+R G L +Q + +E+FN +K + L VRK A + ++ I V+ Sbjct: 70 RKHKRKGYISLLSNQGFKKDLEDFNVTSKVIELDVRKPTPEAAENLNIGMDEDIYYVKRV 129 Query: 137 YYADG-----EDAYAMKRDLTQMADELRRH 161 Y +G E++Y K +T + +E+ H Sbjct: 130 RYINGQTLCYEESYYTKSIVTYLNNEIVSH 159 >2O1M-A nrPDB Length = 258 Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust. Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 2/64 (3%) Query: 35 GLSWPQLSYIAEDENGKIVGYVLAKMEEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQA 94 G +P + +I DE G + GY + ++E +PH T ++ S+ + L Q +D Sbjct: 23 GTQFPNICFI--DEKGDLTGYDVELIKELDKRLPHYKFTFKTMEFSNLLVSLGQHKVDIV 80 Query: 95 SRAM 98 + M Sbjct: 81 AHQM 84 >2VHI-A nrPDB Length = 405 Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust. Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 14/86 (16%) Query: 17 CNLLCLPENYQMKYYFYHGLSWPQLSYIAEDENGKIVGYVLAKMEEDPD----------D 66 CN++C E + M + F +P + E ENG +LA++ + + D Sbjct: 113 CNIVCTQEAWTMPFAFCTREKFPWCEFAEEAENGPTTK-MLAELAKAYNMVIIHSILERD 171 Query: 67 VPHGHI---TSLAVKRSHRRLGLAQK 89 + HG T++ + S R LG +K Sbjct: 172 MEHGETIWNTAVVISNSGRYLGKHRK 197 >4I8O-A nrPDB Length = 358 Score = 27.7 bits (60), Expect = 3.9, Method: Compositional matrix adjust. Identities = 18/63 (28%), Positives = 29/63 (46%) Query: 79 RSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAALHLYSNTLNFQISEVEPKYY 138 RS++ L L + ++ SR IEN N S+ +RA L + ++ V+ Y Sbjct: 5 RSYKNLNLVRANIETESRQFIENKNYSIQSIGPMPGSRAGLRVVFTRPGVNLATVDIFYN 64 Query: 139 ADG 141 DG Sbjct: 65 GDG 67 >2E8Y-A nrPDB Length = 718 Score = 27.3 bits (59), Expect = 5.6, Method: Compositional matrix adjust. Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 6/54 (11%) Query: 134 EPKYYADGEDAYAMKRDLTQMADELRRHLELKEKGRHVVLGAIENKVESKGNSP 187 E Y ++ D K +L QM + L +H G V+L + N V + NSP Sbjct: 301 EGSYASNPHDPQTRKTELKQMINTLHQH------GLRVILDVVFNHVYKRENSP 348 >1YW6-A nrPDB Length = 335 Score = 27.3 bits (59), Expect = 5.7, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 23/47 (48%) Query: 105 KYVSLHVRKSNRAALHLYSNTLNFQISEVEPKYYADGEDAYAMKRDL 151 + VS R S +H+ S+TLNF E DGE+ + + D+ Sbjct: 257 RVVSQITRHSPSFEMHMASDTLNFMPFEKGTLLAQDGEERFTVTHDV 303 >1VHS-A nrPDB Length = 175 Score = 27.3 bits (59), Expect = 6.2, Method: Compositional matrix adjust. Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 4/100 (4%) Query: 23 PENYQMKYYFYHGLSWPQLSYIAEDENGKIVGYVLAKMEEDPDDVPHGHITSLAVKRSHR 82 PE+ +M+++ H S P Y+AEDENG + ++ + S+ + + R Sbjct: 38 PED-RMEWFSGHTESRPL--YVAEDENGNVAAWISFETFYGRPAYNKTAEVSIYIDEACR 94 Query: 83 RLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAALHLY 122 G+ L+ +A R + N + + + N+ +L L+ Sbjct: 95 GKGVGSYLLQEALR-IAPNLGIRSLMAFIFGHNKPSLKLF 133 >4MI4-A nrPDB Length = 197 Score = 26.9 bits (58), Expect = 8.6, Method: Compositional matrix adjust. Identities = 19/83 (22%), Positives = 38/83 (45%), Gaps = 9/83 (10%) Query: 43 YIAEDENGKIVGYVLAKMEEDPDDVPHGHITS---LAVKRSHRRLGLAQKLMDQASRAMI 99 ++ ED ++G V + ++ + H ++ + + H+ G A+ L+++A Sbjct: 82 FVVEDAQKNLIGLV------ELIEINYIHRSAEFQIIIAPEHQGKGFARTLINRALDYSF 135 Query: 100 ENFNAKYVSLHVRKSNRAALHLY 122 N + LHV N A+HLY Sbjct: 136 TILNLHKIYLHVAVENPKAVHLY 158 >4NCZ-A nrPDB Length = 176 Score = 26.6 bits (57), Expect = 9.4, Method: Compositional matrix adjust. Identities = 19/83 (22%), Positives = 38/83 (45%), Gaps = 9/83 (10%) Query: 43 YIAEDENGKIVGYVLAKMEEDPDDVPHGHITS---LAVKRSHRRLGLAQKLMDQASRAMI 99 ++ ED ++G V + ++ + H ++ + + H+ G A+ L+++A Sbjct: 61 FVVEDAQKNLIGLV------ELIEINYIHRSAEFQIIIAPEHQGKGFARTLINRALDYSF 114 Query: 100 ENFNAKYVSLHVRKSNRAALHLY 122 N + LHV N A+HLY Sbjct: 115 TILNLHKIYLHVAVENPKAVHLY 137 >1YX0-A nrPDB Length = 159 Score = 26.6 bits (57), Expect = 9.4, Method: Compositional matrix adjust. Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 12/117 (10%) Query: 39 PQLSYIAEDENGKIVGYVLAKMEEDPDDVPHGHITSLAVKRSHRRLGLA----QKLMDQA 94 P++++ + E ++ G K D HG I S+ SH R G+A Q ++++A Sbjct: 44 PEITFWSAWEGDELAGCGALK----ELDTRHGEIKSMRTSASHLRKGVAKQVLQHIIEEA 99 Query: 95 SRAMIENFNAKYVSLHVRKSNRAALHLYSNTLNFQISEVEPKYYADGEDAYAMKRDL 151 + E + + S+ S A LY + FQ E Y D + K+ L Sbjct: 100 EKRGYERLSLETGSM---ASFEPARKLY-ESFGFQYCEPFADYGEDPNSVFMTKKLL 152 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6C9M-B nrPDB 382 e-107 5C88-A nrPDB 188 1e-48 4HNX-B nrPDB 186 1e-47 2PSW-A nrPDB 176 8e-45 5K04-B nrPDB 175 1e-44 4PV6-C nrPDB 174 3e-44 Sequences not found previously or not previously below threshold: 5HGZ-A nrPDB 70 1e-12 5ISV-A nrPDB 58 3e-09 2CNT-A nrPDB 52 3e-07 3PP9-A nrPDB 51 4e-07 6HD5-v nrPDB 46 2e-05 3JVN-A nrPDB 45 3e-05 1YX0-A nrPDB 44 4e-05 2PDO-A nrPDB 41 6e-04 5IB0-A nrPDB 41 7e-04 1Y9K-A nrPDB 38 0.003 2Q8Q-A nrPDB 37 0.005 4MI4-A nrPDB 37 0.005 4NCZ-A nrPDB 37 0.005 4RI1-A nrPDB 36 0.014 2G3T-A nrPDB 36 0.020 6CY6-A nrPDB 36 0.021 4R9M-A nrPDB 35 0.024 4U9V-B nrPDB 34 0.047 3F8K-A nrPDB 34 0.051 4ZM6-A nrPDB 34 0.078 2EUI-A nrPDB 33 0.093 3EC4-A nrPDB 33 0.12 3OWC-A nrPDB 32 0.17 1GHE-A nrPDB 32 0.18 5T7E-A nrPDB 32 0.22 4UP8-A nrPDB 32 0.26 6D72-A nrPDB 32 0.29 1ON0-A nrPDB 31 0.44 1UFH-A nrPDB 31 0.45 4EVY-A nrPDB 31 0.47 4E8O-A nrPDB 31 0.48 3T90-A nrPDB 31 0.49 3FB3-A nrPDB 31 0.49 2E8Y-A nrPDB 31 0.65 3TTH-A nrPDB 31 0.66 5US1-A nrPDB 31 0.71 2Q4V-A nrPDB 30 0.86 1TOA-A nrPDB 28 2.8 1K0F-A nrPDB 28 2.8 5MAW-D nrPDB 28 2.9 5JPH-A nrPDB 28 3.1 2VQY-A nrPDB 28 3.9 5CD2-A nrPDB 28 4.0 5WJD-A nrPDB 27 7.8 3BWG-A nrPDB 27 9.7 >6C9M-B nrPDB Length = 236 Score = 382 bits (981), Expect = e-107, Method: Composition-based stats. Identities = 235/235 (100%), Positives = 235/235 (100%) Query: 1 MNIRNARPEDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIAEDENGKIVGYVLAKM 60 MNIRNARPEDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIAEDENGKIVGYVLAKM Sbjct: 2 MNIRNARPEDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIAEDENGKIVGYVLAKM 61 Query: 61 EEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAALH 120 EEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAALH Sbjct: 62 EEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAALH 121 Query: 121 LYSNTLNFQISEVEPKYYADGEDAYAMKRDLTQMADELRRHLELKEKGRHVVLGAIENKV 180 LYSNTLNFQISEVEPKYYADGEDAYAMKRDLTQMADELRRHLELKEKGRHVVLGAIENKV Sbjct: 122 LYSNTLNFQISEVEPKYYADGEDAYAMKRDLTQMADELRRHLELKEKGRHVVLGAIENKV 181 Query: 181 ESKGNSPPSSGEACREEKGLAAEDSGGDSKDLSEVSETTESTDVKDSSEASDSAS 235 ESKGNSPPSSGEACREEKGLAAEDSGGDSKDLSEVSETTESTDVKDSSEASDSAS Sbjct: 182 ESKGNSPPSSGEACREEKGLAAEDSGGDSKDLSEVSETTESTDVKDSSEASDSAS 236 >5C88-A nrPDB Length = 173 Score = 188 bits (478), Expect = 1e-48, Method: Composition-based stats. Identities = 59/158 (37%), Positives = 89/158 (56%), Gaps = 9/158 (5%) Query: 1 MNIRNARPEDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIAEDENGKIVGYVLAKM 60 +RNAR +D+ + N L LPENY Y+F L L++ + +VGY++ ++ Sbjct: 12 FTLRNARMDDIDQIIKINRLTLPENYPY-YFFVEHLKEYGLAFFVAIVDNSVVGYIMPRI 70 Query: 61 E-------EDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRK 113 E + P V GH+ S+AV +RR G+A L++ + ++M ++NA+ + L VR Sbjct: 71 EWGFSNIKQLPSLVRKGHVVSIAVLEEYRRKGIATTLLEASMKSMKNDYNAEEIYLEVRV 130 Query: 114 SNRAALHLYSNTLNFQISEVEPKYYADGEDAYAMKRDL 151 SN A+ LY LNF+ +V YYADGEDAY M R L Sbjct: 131 SNYPAIALYEK-LNFKKVKVLKGYYADGEDAYLMARPL 167 >4HNX-B nrPDB Length = 248 Score = 186 bits (471), Expect = 1e-47, Method: Composition-based stats. Identities = 96/212 (45%), Positives = 126/212 (59%), Gaps = 45/212 (21%) Query: 1 MNIRNARPEDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIA------------EDE 48 +NIR A D++ MQ+ NL LPENY MKYY YH LSWP+ S++A +DE Sbjct: 3 INIRRATINDIICMQNANLHNLPENYMMKYYMYHILSWPEASFVATTTTLDCEDSDEQDE 62 Query: 49 NGKI--------------------------VGYVLAKMEEDPDD---VPHGHITSLAVKR 79 N K+ VGYVL KM +DPD P+GHITSL+V R Sbjct: 63 NDKLELTLDGTNDGRTIKLDPTYLAPGEKLVGYVLVKMNDDPDQQNEPPNGHITSLSVMR 122 Query: 80 SHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAALHLYSNTLNFQISEVEPKYYA 139 ++RR+G+A+ LM QA A+ E A+YVSLHVR+SNRAALHLY +TL F++ +E YY Sbjct: 123 TYRRMGIAENLMRQALFALREVHQAEYVSLHVRQSNRAALHLYRDTLAFEVLSIEKSYYQ 182 Query: 140 DGEDAYAMKRDLT----QMADELRRHLELKEK 167 DGEDAYAMK+ L Q+++ R L+ E+ Sbjct: 183 DGEDAYAMKKVLKLEELQISNFTHRRLKENEE 214 >2PSW-A nrPDB Length = 170 Score = 176 bits (445), Expect = 8e-45, Method: Composition-based stats. Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 6/153 (3%) Query: 1 MNIRNARPEDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIAEDENGKIVGYVLAKM 60 + + + P ++ ++ N + P +Y K+Y L +L+ +A N VG V ++ Sbjct: 7 IELGDVTPHNIKQLKRLNQVIFPVSYNDKFY-KDVLEVGELAKLAY-FNDIAVGAVCCRV 64 Query: 61 EEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAALH 120 + + +I +L +RRLG+ K+++ ++ + LHV+ SN +A+ Sbjct: 65 DHSQNQ-KRLYIMTLGCLAPYRRLGIGTKMLNHVLNICEKDGTFDNIYLHVQISNESAID 123 Query: 121 LYSNTLNFQISEVEPKYYADGE--DAYAMKRDL 151 Y F+I E + YY E DA+ ++++L Sbjct: 124 FYRK-FGFEIIETKKNYYKRIEPADAHVLQKNL 155 >5K04-B nrPDB Length = 170 Score = 175 bits (444), Expect = 1e-44, Method: Composition-based stats. Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 15/163 (9%) Query: 2 NIRNARPEDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYI-AEDENGKIVGYVLAKM 60 +I+ + EDL + NL L EN+ + +Y + + WPQL Y E NG+ GY++AK Sbjct: 3 SIKPFQMEDLFELNPVNLDPLTENFNVSFYSQYLIEWPQLFYKSVETPNGQASGYMMAKT 62 Query: 61 E-EDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAAL 119 E + H HIT++ V +RR+GLA KL + + + + ++ L V+ +N Sbjct: 63 EGQLSKKEWHTHITAVTVLDQYRRIGLASKLCLELEN-LTQVKDTLFIDLFVKVTNTLGR 121 Query: 120 HLYSNTLNFQISEVEPKYYA-----------DGEDAYAMKRDL 151 LY L + + YY D DA+ M++ L Sbjct: 122 ILYEK-LGYSVFRRVVGYYGREIQKDRNKIDDSVDAFDMRKLL 163 >4PV6-C nrPDB Length = 162 Score = 174 bits (440), Expect = 3e-44, Method: Composition-based stats. Identities = 41/152 (26%), Positives = 64/152 (42%), Gaps = 7/152 (4%) Query: 2 NIRNARPEDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIAEDENGKIVGYVLAKME 61 IR P+D+ ++ L E Y WP+ S++ G +VG+++ Sbjct: 12 TIREFSPKDIESVYRIAQTSLTEYYTQALILDLHREWPE-SFMVYTVAGSVVGFIVGSKY 70 Query: 62 EDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAALHL 121 + I AV RR+G+ LMD A ++ N V L VR N A+ Sbjct: 71 SRTE----ARILLFAVDERFRRMGVGSALMD-AFLSLCREQNMLSVRLEVRTDNDEAIRF 125 Query: 122 YSNTLNFQISEVEPKYYADGEDAYAMKRDLTQ 153 Y F I+ + P YY+D +AY M R + + Sbjct: 126 YKK-YGFVITAMLPNYYSDSSNAYTMWRIVLE 156 >5HGZ-A nrPDB Length = 243 Score = 69.8 bits (169), Expect = 1e-12, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 62/156 (39%), Gaps = 19/156 (12%) Query: 1 MNIRNARPEDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIAEDENGKIVGYVLAKM 60 +++R +D+ ++H P Y +Y S + +A G IVG ++A++ Sbjct: 14 VSLRLLCHDDIDTVKHLCGDWFPIEYPDSWY-RDITSNKKFFSLAATYRGAIVGMIVAEI 72 Query: 61 EEDPDDVPH---------------GHITSLAVKRSHRRLGLAQKLMDQASR--AMIENFN 103 + +I SL V + R+ G+ L++ + + Sbjct: 73 KNRTKIHKEDGDILASNFSVDTQVAYILSLGVVKEFRKHGIGSLLLESLKDHISTTAQDH 132 Query: 104 AKYVSLHVRKSNRAALHLYSNTLNFQISEVEPKYYA 139 K + LHV +N A++ Y N +F+ P YY+ Sbjct: 133 CKAIYLHVLTTNNTAINFYENR-DFKQHHYLPYYYS 167 >5ISV-A nrPDB Length = 165 Score = 58.2 bits (139), Expect = 3e-09, Method: Composition-based stats. Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 10/115 (8%) Query: 47 DENGKIVGYVLAKMEEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKY 106 +NGK+ + + ++ D + ++AV ++R GL + L++ + + A Sbjct: 46 TQNGKMAAFAITQVVLD-----EATLFNIAVDPDYQRQGLGRALLEHLIDELEKRGVA-T 99 Query: 107 VSLHVRKSNRAALHLYSNTLNFQISEVEPKYY--ADG-EDAYAMKRDLTQMADEL 158 + L VR SN AA+ LY +L F + + YY DG EDA M ++ + L Sbjct: 100 LWLEVRASNAAAIALYE-SLGFNEATIRRNYYPTTDGREDAIIMALPISMAGENL 153 >2CNT-A nrPDB Length = 160 Score = 51.7 bits (122), Expect = 3e-07, Method: Composition-based stats. Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 5/81 (6%) Query: 75 LAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAALHLYSNTLNFQISEVE 134 +AV +R GL + L++ + + L VR SN AA+ LY +L F + + Sbjct: 69 IAVDPDFQRRGLGRMLLEHLIDELETRG-VVTLWLEVRASNAAAIALYE-SLGFNEATIR 126 Query: 135 PKYY---ADGEDAYAMKRDLT 152 YY EDA M ++ Sbjct: 127 RNYYPTAQGHEDAIIMALPIS 147 >3PP9-A nrPDB Length = 187 Score = 51.3 bits (121), Expect = 4e-07, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 52/126 (41%), Gaps = 10/126 (7%) Query: 5 NARPEDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIAEDENGKIVGYVLAKMEEDP 64 ED+ + + +N + + ++ P + +I+G+++ K Sbjct: 44 EYTVEDVPSYEK----SYLQNDNEELVYNEYINKPNQIIYIALLHNQIIGFIVLKK---- 95 Query: 65 DDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAALHLYSN 124 + + +I + V + +R LG+ ++L+ QA + + N + L + +N AA Y Sbjct: 96 NWNNYAYIEDITVDKKYRTLGVGKRLIAQA-KQWAKEGNMPGIMLETQNNNVAACKFYEK 154 Query: 125 TLNFQI 130 F I Sbjct: 155 C-GFVI 159 >6HD5-v nrPDB Length = 176 Score = 45.9 bits (107), Expect = 2e-05, Method: Composition-based stats. Identities = 24/172 (13%), Positives = 57/172 (33%), Gaps = 23/172 (13%) Query: 2 NIRNARPEDLMNMQHCNLLCLPENYQMKYYFYHGLS-----------------WPQLSYI 44 + N +L + + +P YQ ++ + Q++Y Sbjct: 7 TLDNVYANNLGMLTKLAHVTVPNLYQDAFFSALFAEDSLVAKNKKPSSKKDVHFTQMAYY 66 Query: 45 AEDENGKIVGYVLAKMEEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNA 104 +E G +V ++ K + + I L V ++R + KL+ A E Sbjct: 67 SEIPVGGLVAKLVPKKQNELSL-KGIQIEFLGVLPNYRHKSIGSKLLKFAEDKCSECHQ- 124 Query: 105 KYVSLHVRKSNRAALHLY----SNTLNFQISEVEPKYYADGEDAYAMKRDLT 152 V +++ + + + ++ D +DA +K+ ++ Sbjct: 125 HNVFVYLPAVDDLTKQWFIAHGFEQVGETVNNFIKGVNGDEQDAILLKKHIS 176 >3JVN-A nrPDB Length = 166 Score = 44.8 bits (104), Expect = 3e-05, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 43/94 (45%), Gaps = 5/94 (5%) Query: 36 LSWPQLSYIAEDENGKIVGYVLAK----MEEDPDDVPHGHITSLAVKRSHRRLGLAQKLM 91 L P+ + + I+G++ + V I L +++ +RR G+A++LM Sbjct: 51 LDDPECMVYVAEMDDVIIGFITGHFCELISTVSKLVMMATIDELYIEKEYRREGVAEQLM 110 Query: 92 DQASRAMIENFNAKYVSLHVRKSNRAALHLYSNT 125 + + + +++ K + + V N+ AL Y+ Sbjct: 111 MRIEQEL-KDYGVKEIFVEVWDFNKGALEFYNKQ 143 >1YX0-A nrPDB Length = 159 Score = 44.4 bits (103), Expect = 4e-05, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 62/156 (39%), Gaps = 11/156 (7%) Query: 1 MNIRNARPEDLMNMQHCNLLCLPENYQMKYYFYHGLSW---PQLSYIAEDENGKIVGYVL 57 + I + ++++ + +L + + GL P++++ + E ++ G Sbjct: 3 IKIDDLTGRQVVSLVNEHLHSMTLMSPPESIHALGLEKLRGPEITFWSAWEGDELAG--C 60 Query: 58 AKMEEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHV--RKSN 115 ++E D HG I S+ SH R G+A++++ + + +SL S Sbjct: 61 GALKEL--DTRHGEIKSMRTSASHLRKGVAKQVLQHIIEEAEKRG-YERLSLETGSMASF 117 Query: 116 RAALHLYSNTLNFQISEVEPKYYADGEDAYAMKRDL 151 A LY + FQ E Y D + K+ L Sbjct: 118 EPARKLYE-SFGFQYCEPFADYGEDPNSVFMTKKLL 152 >2PDO-A nrPDB Length = 144 Score = 40.5 bits (93), Expect = 6e-04, Method: Composition-based stats. Identities = 28/136 (20%), Positives = 53/136 (38%), Gaps = 9/136 (6%) Query: 1 MNIRNARPEDLMNMQHC-NLLCLPENYQMKYYFYHGLSWPQLS-YIAEDENGKIVGYVLA 58 M IR R ED + L + +S ++ + NG++VG V+ Sbjct: 4 MEIRVFRQEDFEEVITLWERCDLLRPWNDPEMDIERKMNHDVSLFLVAEVNGEVVGTVMG 63 Query: 59 KMEEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAA 118 + G L V R G+A L+++ + +I K + ++V + N Sbjct: 64 GYD-----GHRGSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPK-IQINVPEDNDMV 117 Query: 119 LHLYSNTLNFQISEVE 134 L +Y L ++ ++V Sbjct: 118 LGMYER-LGYEHADVL 132 >5IB0-A nrPDB Length = 137 Score = 40.5 bits (93), Expect = 7e-04, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 44/102 (43%), Gaps = 7/102 (6%) Query: 28 MKYYFYHGLSWPQLSYIAEDENGKIVGYVLAKMEEDPDDVPHGHITSLAVKRSHRRLGLA 87 ++ + P LS + E E G+++ ++A D G++ L V +R LGLA Sbjct: 32 YPFFLAYLQRNPGLSLLVETE-GEVIACLMAG-----HDGRRGYLQHLVVDPGYRGLGLA 85 Query: 88 QKLMDQASRAMIENFNAKYVSLHVRKSNRAALHLYSNTLNFQ 129 ++++D+ + K + V + A + +++ Sbjct: 86 RRMLDEVLARLAREGIGKS-HVFVLDAAEEAQAFWRAQSDWE 126 >1Y9K-A nrPDB Length = 157 Score = 38.2 bits (87), Expect = 0.003, Method: Composition-based stats. Identities = 30/131 (22%), Positives = 58/131 (44%), Gaps = 18/131 (13%) Query: 40 QLSYIAEDENGKIVG-YVLAKMEEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAM 98 L+Y+A+ + G ++G YVL I ++AV + G+ +KL+ A Sbjct: 37 GLTYVAK-QGGSVIGVYVL-----LETRPKTMEIMNIAVAEHLQGKGIGKKLLRHAVETA 90 Query: 99 IENFNAKYVSLHVRKSNRAA--LHLYSNTLNFQISEVEPKYYADGEDAYAMK-----RDL 151 +K L V N + L LY F+I ++ Y++ + ++ RD+ Sbjct: 91 KGYGMSK---LEVGTGNSSVSQLALYQKC-GFRIFSIDFDYFSKHYEEEIIENGIVCRDM 146 Query: 152 TQMADELRRHL 162 ++A EL +++ Sbjct: 147 IRLAMELNKNV 157 >2Q8Q-A nrPDB Length = 260 Score = 37.4 bits (85), Expect = 0.005, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 9/76 (11%) Query: 109 LHVRKSNRAALHLYSNTLNFQISEVEPKYYADGEDAYAMKRDLTQMADELRRHLELKEKG 168 L V Y Y+ D + M++ +TQ+ D+ R + KE Sbjct: 65 LSVSTIKDEMQPFYKQL-------NMKGYFYDFDSLKGMQKSITQLGDQFNRKAQAKELN 117 Query: 169 RHVVLGAIENKVESKG 184 H L +++ K+E+K Sbjct: 118 DH--LNSVKQKIENKA 131 >4MI4-A nrPDB Length = 197 Score = 37.4 bits (85), Expect = 0.005, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 53/153 (34%), Gaps = 17/153 (11%) Query: 8 PEDLMNMQHCNLLCLPENYQ-----MKYYFYHGLSWPQLSYIAEDENGKIVGYV-LAKME 61 +L N ++ E Y+ + Y H + ++ ED ++G V L ++ Sbjct: 42 IHNLNNNRNIMSYWFEEPYESFDELEELYNKHIHDNAERRFVVEDAQKNLIGLVELIEIN 101 Query: 62 EDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAALHL 121 I + H+ G A+ L+++A N + LHV N A+HL Sbjct: 102 YIHRSAEFQIIIA----PEHQGKGFARTLINRALDYSFTILNLHKIYLHVAVENPKAVHL 157 Query: 122 YSNTLNFQISEVEP------KYYADGEDAYAMK 148 Y F Y D + Y ++ Sbjct: 158 YEEC-GFVEEGHLVEEFFINGRYQDVKRMYILQ 189 >4NCZ-A nrPDB Length = 176 Score = 37.4 bits (85), Expect = 0.005, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 53/153 (34%), Gaps = 17/153 (11%) Query: 8 PEDLMNMQHCNLLCLPENYQ-----MKYYFYHGLSWPQLSYIAEDENGKIVGYV-LAKME 61 +L N ++ E Y+ + Y H + ++ ED ++G V L ++ Sbjct: 21 IHNLNNNRNIMSYWFEEPYESFDELEELYNKHIHDNAERRFVVEDAQKNLIGLVELIEIN 80 Query: 62 EDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAALHL 121 I + H+ G A+ L+++A N + LHV N A+HL Sbjct: 81 YIHRSAEFQIIIA----PEHQGKGFARTLINRALDYSFTILNLHKIYLHVAVENPKAVHL 136 Query: 122 YSNTLNFQISEVEP------KYYADGEDAYAMK 148 Y F Y D + Y ++ Sbjct: 137 YEEC-GFVEEGHLVEEFFINGRYQDVKRMYILQ 168 >4RI1-A nrPDB Length = 186 Score = 35.9 bits (81), Expect = 0.014, Method: Composition-based stats. Identities = 16/107 (14%), Positives = 37/107 (34%), Gaps = 6/107 (5%) Query: 31 YFYHGLSWPQLSYIAEDENGKIVGYVLAKMEEDPDDVPHGHITSLAVKRSHRRLGLAQKL 90 + + P Y E G +G + + + HG++ K + G + + Sbjct: 58 FIEDLKNSPNHRYFLFKEEGVYLG--VGSITKINFFHKHGYLGIY--KNPFLKNG-GETI 112 Query: 91 MDQASRAMIENFNAKYVSLHVRKSNRAALHLYSNTLNFQISEVEPKY 137 + E F + L V ++N A+ Y ++++ + Sbjct: 113 LKALEFIAFEEFQLHSLHLEVMENNFKAIAFYEKN-HYELEGRLKGF 158 >2G3T-A nrPDB Length = 179 Score = 35.5 bits (80), Expect = 0.020, Method: Composition-based stats. Identities = 20/161 (12%), Positives = 53/161 (32%), Gaps = 25/161 (15%) Query: 1 MNIRNARPEDLMNMQHC-----------NLLCLPEN--YQMKY--YFYHGLSWPQLSYIA 45 IR A D ++ + L E + + + ++ ++ Sbjct: 4 FVIRPATAADCSDILRLIKELAKYEYMEEQVILTEKDLLEDGFGEHPFYHCLVAEVPKEH 63 Query: 46 EDENG-KIVGYVLAKMEEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNA 104 G IVG+ + DP ++ V +R G+ +++ S+ + Sbjct: 64 WTPEGHSIVGFAMYYFTYDPWIGKLLYLEDFFVMSDYRGFGIGSEILKNLSQVAMRCR-C 122 Query: 105 KYVSLHVRKSNRAALHLYSNT--------LNFQISEVEPKY 137 + V + N +++ Y +++ +++ +Y Sbjct: 123 SSMHFLVAEWNEPSINFYKRRGASDLSSEEGWRLFKIDKEY 163 >6CY6-A nrPDB Length = 186 Score = 35.5 bits (80), Expect = 0.021, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 34/101 (33%), Gaps = 5/101 (4%) Query: 30 YYFYHGLSWPQLSYIAEDENGKIVGYVLAKMEEDPDDVPHGHITSLAVKRSHRRLGLAQK 89 Y H + ++ E + K L ++ I S ++ GLA + Sbjct: 47 LYDKHIHDQSERRFVVECDGEKAGLVELVEINHVHRRAEFQIIIS----PEYQGKGLATR 102 Query: 90 LMDQASRAMIENFNAKYVSLHVRKSNRAALHLYSNTLNFQI 130 A N + L V K N A+H+Y L F + Sbjct: 103 AAKLAMDYGFTVLNLYKLYLIVDKENEKAIHIYRK-LGFSV 142 >4R9M-A nrPDB Length = 210 Score = 35.1 bits (79), Expect = 0.024, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 34/101 (33%), Gaps = 5/101 (4%) Query: 30 YYFYHGLSWPQLSYIAEDENGKIVGYVLAKMEEDPDDVPHGHITSLAVKRSHRRLGLAQK 89 Y H + ++ E + K L ++ I S ++ GLA + Sbjct: 71 LYDKHIHDQSERRFVVECDGEKAGLVELVEINHVHRRAEFQIIIS----PEYQGKGLATR 126 Query: 90 LMDQASRAMIENFNAKYVSLHVRKSNRAALHLYSNTLNFQI 130 A N + L V K N A+H+Y L F + Sbjct: 127 AAKLAMDYGFTVLNLYKLYLIVDKENEKAIHIYRK-LGFSV 166 >4U9V-B nrPDB Length = 197 Score = 34.4 bits (77), Expect = 0.047, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Query: 82 RRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAALHLYSNTLNFQISEVEPK 136 RR GL K + Q + M + K V L V K N A + L F+I + P Sbjct: 124 RRKGLG-KFLIQILQLMANSTQMKKVMLTVFKHNHGAYQFFREALQFEIDDSSPS 177 >3F8K-A nrPDB Length = 160 Score = 34.0 bits (76), Expect = 0.051, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 54/141 (38%), Gaps = 4/141 (2%) Query: 1 MNIRNARPEDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIAEDENGKI-VGYVLAK 59 + IR A ED + E+ ++++ + ++ IA +E+ + V K Sbjct: 5 IKIRKATKEDWEKIYQLYNSLSDEDLYLRFFHLYRITEEDAKKIASNEDHVTFLAEVDGK 64 Query: 60 MEEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAAL 119 + + G SL V R++R LG+ L+ ++ V + N + Sbjct: 65 VVGEASLHKDGEF-SLVVHRNYRTLGIGTLLVKTLIEEAKKSG-LSTVKFYTLPENTPMI 122 Query: 120 HLYSNTLNFQISEVEPKYYAD 140 + L F++ E + Y + Sbjct: 123 KIGRK-LGFKMRFYEDEVYGE 142 >4ZM6-A nrPDB Length = 858 Score = 33.6 bits (75), Expect = 0.078, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 40 QLSYIAEDENGKIVGYVLAKMEEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMI 99 Q +A D GKIVG+V ++ D+ HG + L V S++ G+ L D A Sbjct: 582 QKHKVARDSQGKIVGFVATQIV-VVDNKKHGQLMLLMVSPSYQGKGVGTLLHDAALEHFR 640 Query: 100 ENF 102 E Sbjct: 641 EQG 643 >2EUI-A nrPDB Length = 153 Score = 33.2 bits (74), Expect = 0.093, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 53/153 (34%), Gaps = 13/153 (8%) Query: 1 MNIRNARPEDLMNMQHC--------NLLCLPENYQMKYYFYHGLSWPQLSYIA-EDENGK 51 M I A E L + +L PE+ K+ + Y+A DE + Sbjct: 1 MRIVQATLEHLDLLAPLFVKYREFYGMLSYPES-SRKFLEKRLRRKESVIYLALADEEDR 59 Query: 52 IVGYVLAKMEEDPDDVPHGHITS-LAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLH 110 ++G+ + I + + V RR +A L+ A + M +A + + Sbjct: 60 LLGFCQLYPSFSSLSLKRVWILNDIYVAEEARRQLVADHLLQHA-KQMARETHAVRMRVS 118 Query: 111 VRKSNRAALHLYSNTLNFQISEVEPKYYADGED 143 N A +Y ++ F+ + Y D Sbjct: 119 TSVDNEVAQKVYE-SIGFREDQEFKNYTLPISD 150 >3EC4-A nrPDB Length = 228 Score = 32.8 bits (73), Expect = 0.12, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 6/92 (6%) Query: 38 WPQLSYIAEDENGKIVGYVLAKMEEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRA 97 W + +G++ +M P+ ++ + +R GLA +L+ + Sbjct: 129 WRYGQFYGVRIDGRLAAMAGERMRPAPNL---AEVSGVCTWPEYRGRGLAARLIRKVIAG 185 Query: 98 MIENFNAKYVSLHVRKSNRAALHLYSNTLNFQ 129 M LH SN +A+ LY +L F+ Sbjct: 186 MAARGEVP--YLHSYASNASAIRLYE-SLGFR 214 >3OWC-A nrPDB Length = 188 Score = 32.4 bits (72), Expect = 0.17, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 29/77 (37%), Gaps = 5/77 (6%) Query: 49 NGKIVGYVLAKMEEDPDDVPHGHITSLAVKRSHRR-LGLAQKLMDQASRAMIENFNAKYV 107 + +++G+ + V I V R GL +++ + + + V Sbjct: 76 DDQVIGHCQLLFDRRNGVVRLARI----VLAPSARGQGLGLPMLEALLAEAFADADIERV 131 Query: 108 SLHVRKSNRAALHLYSN 124 L+V N AA HLY Sbjct: 132 ELNVYDWNAAARHLYRR 148 >1GHE-A nrPDB Length = 177 Score = 32.4 bits (72), Expect = 0.18, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 37/99 (37%), Gaps = 3/99 (3%) Query: 39 PQLSYIAEDENGKIVGYVLAKMEEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAM 98 L E+ ++ + + P+ + + L V S R GL ++LMD+ + Sbjct: 60 GSLLLWVVAEDDNVLASAQLSLCQKPNGLNRAEVQKLMVLPSARGRGLGRQLMDEVEQVA 119 Query: 99 IENFNAKYVSLHVRKSNRAALHLYSNTLNFQISEVEPKY 137 +++ LH+ + + + L + P Y Sbjct: 120 VKHKRGL---LHLDTEAGSVAEAFYSALAYTRVGELPGY 155 >5T7E-A nrPDB Length = 189 Score = 32.1 bits (71), Expect = 0.22, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 35/86 (40%), Gaps = 2/86 (2%) Query: 43 YIAEDENGKIVGYVLAKMEEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENF 102 ++ + +G++ G A + + +++ V H+R GL L +++ E Sbjct: 65 WLVAEVDGEVAGIAYAGPWKARNAYDWTAESTVYVSPRHQRTGLGSTLYTHLLKSL-EAQ 123 Query: 103 NAKYVSLHVRKSNRAALHLYSNTLNF 128 K V + N ++ ++ L + Sbjct: 124 GFKSVVAVIGLPNDPSVRMHE-ALGY 148 >4UP8-A nrPDB Length = 777 Score = 31.7 bits (70), Expect = 0.26, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 59/196 (30%), Gaps = 23/196 (11%) Query: 21 CLPENYQMKYYFYHGLSWPQLSYIAEDENGKIVGYVLAKM--EEDPDDVPHGHITSLAVK 78 ++ + P+L G Y + ++ E D + T+ Sbjct: 218 PFITHHNQLDIQMYMRIAPELYLKELVVGGINRVYEIGRLFRNEGIDQTHNPEFTTCEFY 277 Query: 79 RSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVR-----KSNRAALHLYSNTLNFQISE- 132 ++ K+ ++ M+++ L ++ +N + + I Sbjct: 278 MAYADYNDIMKMTEELLGNMVKDITGGSTKLEIKDRLMDINNEEDIKMLEKFFKEPIPRP 337 Query: 133 --------------VEPKYYADGEDAYAMKRDLTQMADELRRHLELKEKGRHV-VLGAIE 177 E YY DG + AMK+ E + L+ + + + A+E Sbjct: 338 FNSAECSKVIEKHCTELNYYYDGNNEKAMKKLFADFVTEKKMVLDFTAPFKRISYVHALE 397 Query: 178 NKVESKGNSPPSSGEA 193 K K P EA Sbjct: 398 EKFGEKIPRPLDGPEA 413 >6D72-A nrPDB Length = 184 Score = 31.7 bits (70), Expect = 0.29, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 45/114 (39%), Gaps = 6/114 (5%) Query: 30 YYFYHGLSWPQLSYIAEDENGKIVGYVLAKMEEDPDDVPHGHITSLAVKRSHRRLGLAQK 89 Y H + +I E + KI L ++ + + +H+ G A Sbjct: 50 LYDKHIHDQSERRFIIESQGTKIGLVELVEINHIHRRAE----FQIIIDPTHQGKGYAGA 105 Query: 90 LMDQASRAMIENFNAKYVSLHVRKSNRAALHLYSNTLNFQIS-EVEPKYYADGE 142 A N + L V K N A+H+YS L F+I E++ +++ +GE Sbjct: 106 AAKLAMEYGFSVLNLYKLYLIVDKENEKAIHIYSK-LGFEIEGELKQEFFINGE 158 >1ON0-A nrPDB Length = 158 Score = 30.9 bits (68), Expect = 0.44, Method: Composition-based stats. Identities = 29/102 (28%), Positives = 40/102 (39%), Gaps = 6/102 (5%) Query: 35 GLSWPQLSYIAEDENGK-IVGYVLAKME-EDPDDVPHGHITSLAVKRSHRRLGLAQKLMD 92 GL P + N K IVG++ E E P I + +R G A K Sbjct: 54 GLETPHHHLWSLKLNEKDIVGWLWIHAEPEHPQQE--AFIYDFGLYEPYRGKGYA-KQAL 110 Query: 93 QASRAMIENFNAKYVSLHVRKSNRAALHLYSNTLNFQISEVE 134 A + + +SLHV N+ A LY T FQ ++V Sbjct: 111 AALDQAARSMGIRKLSLHVFAHNQTARKLYEQT-GFQETDVV 151 >1UFH-A nrPDB Length = 180 Score = 30.9 bits (68), Expect = 0.45, Method: Composition-based stats. Identities = 29/102 (28%), Positives = 40/102 (39%), Gaps = 6/102 (5%) Query: 35 GLSWPQLSYIAEDENGK-IVGYVLAKME-EDPDDVPHGHITSLAVKRSHRRLGLAQKLMD 92 GL P + N K IVG++ E E P I + +R G A K Sbjct: 78 GLETPHHHLWSLKLNEKDIVGWLWIHAEPEHPQQE--AFIYDFGLYEPYRGKGYA-KQAL 134 Query: 93 QASRAMIENFNAKYVSLHVRKSNRAALHLYSNTLNFQISEVE 134 A + + +SLHV N+ A LY T FQ ++V Sbjct: 135 AALDQAARSMGIRKLSLHVFAHNQTARKLYEQT-GFQETDVV 175 >4EVY-A nrPDB Length = 166 Score = 30.9 bits (68), Expect = 0.47, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 59/150 (39%), Gaps = 12/150 (8%) Query: 1 MNIRNAR---PEDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIAEDENGKIVGYVL 57 MNI+ A +D + +++ L E ++ L +A + + + + Sbjct: 22 MNIKPASEASLKDWLELRN-KLWSDSEASHLQEMHQLLAEKYALQLLAYS-DHQAIAMLE 79 Query: 58 AKME----EDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRK 113 A + + P G + + V +HRR G+A L+ QA + ++ S Sbjct: 80 ASIRFEYVNGTETSPVGFLEGIYVLPAHRRSGVATMLIRQAEVWAKQFSCTEFAS-DAAL 138 Query: 114 SNRAALHLYSNTLNFQISEVEPKYYADGED 143 N + ++ +L FQ +E Y++ D Sbjct: 139 DNVISHAMHR-SLGFQETEKVV-YFSKKID 166 >4E8O-A nrPDB Length = 167 Score = 30.9 bits (68), Expect = 0.48, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 52/143 (36%), Gaps = 8/143 (5%) Query: 1 MNIRNARPEDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIAEDENGKIVGYVLAKM 60 M I ++ D + + C L E+ ++ +L +A + + + + A + Sbjct: 25 MPISESQLSDWLAL-RCLLWPDHEDVHLQEMRQLITQAHRLQLLAYTDTQQAIAMLEASI 83 Query: 61 EED----PDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNR 116 + P + + V +RR G+A L+ Q + ++ S N+ Sbjct: 84 RYEYVNGTQTSPVAFLEGIFVLPEYRRSGIATGLVQQVEIWAKQFACTEFAS-DAALDNQ 142 Query: 117 AALHLYSNTLNFQISEVEPKYYA 139 + ++ L F +E Y+ Sbjct: 143 ISHAMHQ-ALGFHETERVV-YFK 163 >3T90-A nrPDB Length = 149 Score = 30.9 bits (68), Expect = 0.49, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 24/73 (32%), Gaps = 4/73 (5%) Query: 52 IVGYVLAKMEEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHV 111 G V+ + + + GHI + V R L +K+++ K + L Sbjct: 66 ATGSVMIEKKFLRNCGKAGHIEDVVVDSRFRGKQLGKKVVEFLMDHCKSMGCYKVI-LDC 124 Query: 112 RKSNRAALHLYSN 124 N+ Y Sbjct: 125 SVENK---VFYEK 134 >3FB3-A nrPDB Length = 161 Score = 30.9 bits (68), Expect = 0.49, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 5/65 (7%) Query: 70 GHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAALHLYSNTLNFQ 129 GHI + V S+R GL + L+ + E +K + S+ +L Y L F+ Sbjct: 97 GHIEDVVVDPSYRGAGLGKALIMD----LCEISRSKGCYKVILDSSEKSLPFYEK-LGFR 151 Query: 130 ISEVE 134 E + Sbjct: 152 AHERQ 156 >2E8Y-A nrPDB Length = 718 Score = 30.5 bits (67), Expect = 0.65, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 43/130 (33%), Gaps = 8/130 (6%) Query: 59 KMEEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAA 118 + E+ + G +L + G + L + V+ Sbjct: 226 SIHENSGMINKGKYLALTETDTQTANGSSSGLAYVKELGVTHV-ELLPVNDFAGVDEEKP 284 Query: 119 LHLYSNTLN-FQISEVEPKYYADGEDAYAMKRDLTQMADELRRHLELKEKGRHVVLGAIE 177 L Y+ N E Y ++ D K +L QM + L +H G V+L + Sbjct: 285 LDAYNWGYNPLHFFAPEGSYASNPHDPQTRKTELKQMINTLHQH------GLRVILDVVF 338 Query: 178 NKVESKGNSP 187 N V + NSP Sbjct: 339 NHVYKRENSP 348 >3TTH-A nrPDB Length = 170 Score = 30.5 bits (67), Expect = 0.66, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 46/128 (35%), Gaps = 10/128 (7%) Query: 30 YYFYHGLSWPQLSYIAEDENGKIVGYV-LAKMEEDPDDVPHGHITSLAVKRSHRRLGLAQ 88 + H + +I +D VG V L +++ I S G A Sbjct: 47 LHIKHIHDQSERRFIIKDLKDNKVGLVELTEIDFIHRRCEFAIIISPG----EEGKGYAT 102 Query: 89 KLMDQASRAMIENFNAKYVSLHVRKSNRAALHLYSNTLNFQISEVEPKYYADGE-----D 143 + D N + L V + N AALH+Y + + ++ +YY+ G Sbjct: 103 EATDLTVEYAFSILNLHKIYLLVDEDNPAALHIYRKSGFAEEGKLVDEYYSKGRYRTAIR 162 Query: 144 AYAMKRDL 151 Y +K+ L Sbjct: 163 MYVLKKSL 170 >5US1-A nrPDB Length = 189 Score = 30.5 bits (67), Expect = 0.71, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 38/77 (49%), Gaps = 11/77 (14%) Query: 70 GHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAALHLYSNTLNFQ 129 G++ ++ V++S+RR G+ ++LM Q ++ + + L + ++ LY ++ +Q Sbjct: 87 GYVEAMVVEQSYRRQGIGRQLMLQTNKIIASCYQ-----LGLLSASDDGQKLYH-SVGWQ 140 Query: 130 I-----SEVEPKYYADG 141 I E++ Y Sbjct: 141 IWKGKLFELKQGSYIRS 157 >2Q4V-A nrPDB Length = 170 Score = 30.1 bits (66), Expect = 0.86, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 31/72 (43%), Gaps = 1/72 (1%) Query: 52 IVGYVLAKMEEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHV 111 +VGY + ++ + V +R G+ K++ + + ++ +++ L V Sbjct: 71 VVGYGIYYFIYSTWKGRTIYLEDIYVMPEYRGQGIGSKIIKKVAEVALDKGCSQF-RLAV 129 Query: 112 RKSNRAALHLYS 123 N+ A+ LY Sbjct: 130 LDWNQRAMDLYK 141 >1TOA-A nrPDB Length = 313 Score = 28.2 bits (61), Expect = 2.8, Method: Composition-based stats. Identities = 19/119 (15%), Positives = 44/119 (36%) Query: 88 QKLMDQASRAMIENFNAKYVSLHVRKSNRAALHLYSNTLNFQISEVEPKYYADGEDAYAM 147 Q+ +D+ + + V + A +S F++ ++ A A+ M Sbjct: 176 QQQLDKLDAYVRRKAQSLPAERRVLVTAHDAFGYFSRAYGFEVKGLQGVSTASEASAHDM 235 Query: 148 KRDLTQMADELRRHLELKEKGRHVVLGAIENKVESKGNSPPSSGEACREEKGLAAEDSG 206 + +A + ++ H + A+ + V+++G+ GE + G A G Sbjct: 236 QELAAFIAQRKLPAIFIESSIPHKNVEALRDAVQARGHVVQIGGELFSDAMGDAGTSEG 294 >1K0F-A nrPDB Length = 277 Score = 28.2 bits (61), Expect = 2.8, Method: Composition-based stats. Identities = 19/119 (15%), Positives = 44/119 (36%) Query: 88 QKLMDQASRAMIENFNAKYVSLHVRKSNRAALHLYSNTLNFQISEVEPKYYADGEDAYAM 147 Q+ +D+ + + V + A +S F++ ++ A A+ M Sbjct: 140 QQQLDKLDAYVRRKAQSLPAERRVLVTAHDAFGYFSRAYGFEVKGLQGVSTASEASAHDM 199 Query: 148 KRDLTQMADELRRHLELKEKGRHVVLGAIENKVESKGNSPPSSGEACREEKGLAAEDSG 206 + +A + ++ H + A+ + V+++G+ GE + G A G Sbjct: 200 QELAAFIAQRKLPAIFIESSIPHKNVEALRDAVQARGHVVQIGGELFSDAMGDAGTSEG 258 >5MAW-D nrPDB Length = 311 Score = 28.2 bits (61), Expect = 2.9, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 5/58 (8%) Query: 173 LGAIENKVESKGNSPPSSGEACREEKGLAAEDSGGDSKDLSEVSETTESTDVKDSSEA 230 LGA++N++E N+ +SGE AAE D E+SE T++ + +S+A Sbjct: 242 LGAVQNRLEHTINNLSASGENLT-----AAESRIRDVDMAKEMSEFTKNNILSQASQA 294 >5JPH-A nrPDB Length = 144 Score = 28.2 bits (61), Expect = 3.1, Method: Composition-based stats. Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 13/133 (9%) Query: 26 YQMKYYFYHGLSWPQLSYIAEDENGKI--VGY----VLAKMEEDPDDVPHGHITSLAVKR 79 Y K F P+ S I E E+ I +GY +A P + I +AV + Sbjct: 19 YIRKKVFVEEQGIPEESEIDEYESESIHLIGYDNGQPVATARIRPINETTVKIERVAVMK 78 Query: 80 SHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAALHLYSNTLNFQISEVEPKYYA 139 SHR G+ + LM QA ++ ++ +++ + A+ Y +LNF++ + Sbjct: 79 SHRGQGMGRMLM-QAVESLAKDEGFYVATMNAQCH---AIPFYE-SLNFKMRGNI--FLE 131 Query: 140 DGEDAYAMKRDLT 152 +G + M + LT Sbjct: 132 EGIEHIEMTKKLT 144 >2VQY-A nrPDB Length = 202 Score = 27.8 bits (60), Expect = 3.9, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 47/150 (31%), Gaps = 23/150 (15%) Query: 1 MNIRNARPEDLMNMQH-CNLLCLPENYQ-----------MKYYFYHGLSWPQLSYIAEDE 48 + +R DL + N + E + + Y L+ ++ Sbjct: 26 VTLRLMTEHDLAMLYEWLNRSHIVEWWGGEEARPTLADVQEQYLPSVLAQESVTPYIAML 85 Query: 49 NGKIVGYVLAKM---------EEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMI 99 NG+ +GY + + EE+ D G I L S GL KL+ + Sbjct: 86 NGEPIGYAQSYVALGSGDGWWEEETDPGVRG-IDQLLANASQLGKGLGTKLVRALVELLF 144 Query: 100 ENFNAKYVSLHVRKSNRAALHLYSNTLNFQ 129 + + SN A+ Y F+ Sbjct: 145 NDPEVTKIQTDPSPSNLRAIRCYEKA-GFE 173 >5CD2-A nrPDB Length = 372 Score = 27.8 bits (60), Expect = 4.0, Method: Composition-based stats. Identities = 20/143 (13%), Positives = 44/143 (30%), Gaps = 14/143 (9%) Query: 12 MNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIAEDENGKIVGYVLAKME----EDPDDV 67 + + L E K Y + W + + + + + Y ++ PD Sbjct: 202 EEIYQSSAKLLKETMP-KGYSPDWVEWDKTQFKKDSKAQSVGSYNAIRVYLWAGMLPDSD 260 Query: 68 PHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENF--------NAKYVSLHVRKSNRAAL 119 P+ L + R+ K M + + NA + L + + Sbjct: 261 PN-KALLLGKMKPLLRVIERNKGMPETINVLTGKGKNQGGVGMNAAILPLLSSLDSNTNV 319 Query: 120 HLYSNTLNFQISEVEPKYYADGE 142 Y + ++ ++E YY + Sbjct: 320 AEYEKKIQAELPKIESDYYYNSV 342 >5WJD-A nrPDB Length = 159 Score = 27.0 bits (58), Expect = 7.8, Method: Composition-based stats. Identities = 10/51 (19%), Positives = 18/51 (35%) Query: 59 KMEEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSL 109 K+ + S+ V + HR G + +M A + K + L Sbjct: 64 KLSPINSKKKACFVESVVVDKRHRGQGFGKLIMKFAEDYCRVVLDLKTIYL 114 >3BWG-A nrPDB Length = 239 Score = 26.7 bits (57), Expect = 9.7, Method: Composition-based stats. Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 7/90 (7%) Query: 79 RSHRRLGLAQKLMDQASRAMIENFNAKY--VSLHVRKSNRAALHLYSNTLNFQISEVEPK 136 R H+R G L +Q + +E+FN + L VRK A + ++ I V+ Sbjct: 70 RKHKRKGYISLLSNQGFKKDLEDFNVTSKVIELDVRKPTPEAAENLNIGMDEDIYYVKRV 129 Query: 137 YYADG-----EDAYAMKRDLTQMADELRRH 161 Y +G E++Y K +T + +E+ H Sbjct: 130 RYINGQTLCYEESYYTKSIVTYLNNEIVSH 159 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.308 0.125 0.312 Lambda K H 0.267 0.0390 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,196,692 Number of Sequences: 36641 Number of extensions: 306193 Number of successful extensions: 736 Number of sequences better than 10.0: 54 Number of HSP's better than 10.0 without gapping: 44 Number of HSP's successfully gapped in prelim test: 48 Number of HSP's that attempted gapping in prelim test: 661 Number of HSP's gapped (non-prelim): 94 length of query: 235 length of database: 10,336,785 effective HSP length: 94 effective length of query: 141 effective length of database: 6,892,531 effective search space: 971846871 effective search space used: 971846871 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.6 bits) S2: 57 (26.6 bits)