BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P41181 (271 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4OJ2-X nrPDB 543 e-155 4NEF-A nrPDB 475 e-135 3D9S-A nrPDB 335 1e-92 1YMG-A nrPDB 308 2e-84 3M9I-A nrPDB 278 2e-75 1J4N-A nrPDB 237 4e-63 1IH5-A nrPDB 234 3e-62 2ZZ9-A nrPDB 233 7e-62 3IYZ-A nrPDB 233 9e-62 3GD8-A nrPDB 229 8e-61 5I32-A nrPDB 137 5e-33 3CLL-A nrPDB 129 2e-30 2O9F-A nrPDB 94 4e-20 3LLQ-A nrPDB 88 4e-18 2W1P-A nrPDB 87 1e-17 3NE2-A nrPDB 85 3e-17 2EVU-A nrPDB 82 3e-16 1LDI-A nrPDB 77 8e-15 6F7H-A nrPDB 50 1e-06 3C02-A nrPDB 48 4e-06 2GTT-A nrPDB 28 3.2 4OBT-A nrPDB 28 5.4 5JRH-A nrPDB 27 7.4 4FC4-A nrPDB 27 9.4 >4OJ2-X nrPDB Length = 274 Score = 543 bits (1399), Expect = e-155, Method: Compositional matrix adjust. Identities = 270/271 (99%), Positives = 271/271 (100%) Query: 1 MWELRSIAFSRAVFAEFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLGIGTLVQALG 60 MWELRSIAFSRAVFAEFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLGIGTLVQALG Sbjct: 4 MWELRSIAFSRAVFAEFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLGIGTLVQALG 63 Query: 61 HISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNA 120 HISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNA Sbjct: 64 HISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNA 123 Query: 121 LSNSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGIHYTG 180 LSNSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGIHYTG Sbjct: 124 LSNSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGIHYTG 183 Query: 181 CSMNPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNYVLFPPAKSLSERLAVLKGL 240 CSMNPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNYVLFPPAKSLSERLAVLKGL Sbjct: 184 CSMNPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNYVLFPPAKSLSERLAVLKGL 243 Query: 241 EPDTDWEEREVRRRQSVELHSPQSLPRGTKA 271 EPDTDWEEREVRRRQ+VELHSPQSLPRGTKA Sbjct: 244 EPDTDWEEREVRRRQAVELHSPQSLPRGTKA 274 >4NEF-A nrPDB Length = 242 Score = 475 bits (1223), Expect = e-135, Method: Compositional matrix adjust. Identities = 240/240 (100%), Positives = 240/240 (100%) Query: 3 ELRSIAFSRAVFAEFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLGIGTLVQALGHI 62 ELRSIAFSRAVFAEFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLGIGTLVQALGHI Sbjct: 3 ELRSIAFSRAVFAEFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLGIGTLVQALGHI 62 Query: 63 SGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNALS 122 SGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNALS Sbjct: 63 SGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNALS 122 Query: 123 NSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGIHYTGCS 182 NSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGIHYTGCS Sbjct: 123 NSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGIHYTGCS 182 Query: 183 MNPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNYVLFPPAKSLSERLAVLKGLEP 242 MNPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNYVLFPPAKSLSERLAVLKGLEP Sbjct: 183 MNPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNYVLFPPAKSLSERLAVLKGLEP 242 >3D9S-A nrPDB Length = 266 Score = 335 bits (859), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 171/261 (65%), Positives = 214/261 (81%), Gaps = 2/261 (0%) Query: 3 ELRSIAFSRAVFAEFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLGIGTLVQALGHI 62 E+ S+AF +AVFAEFLATL+FVFFGLGSAL WP ALP++LQIA+AFGL IGTL QALG + Sbjct: 5 EVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPV 64 Query: 63 SGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNALS 122 SG HINPA+T+A LVG +S+LRA FYVAAQL+GA+AGA +L+ + P + RG+LAVNAL+ Sbjct: 65 SGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALN 124 Query: 123 NSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGIHYTGCS 182 N+TT GQA+ VEL LT QL LCIFASTD RR G+PALSIG SV LGHL+GI++TGCS Sbjct: 125 NNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTGCS 184 Query: 183 MNPARSLAPAVVTGKFDD-HWVFWIGPLVGAILGSLLYNYVLFPPAKSLSERLAVLKG-L 240 MNPARS PAVV +F HWVFW+GP+VGA+L ++LY Y+LFP + SLSER+A++KG Sbjct: 185 MNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLSLSERVAIIKGTY 244 Query: 241 EPDTDWEEREVRRRQSVELHS 261 EPD DWEE+ R++++EL + Sbjct: 245 EPDEDWEEQREERKKTMELTT 265 >1YMG-A nrPDB Length = 263 Score = 308 bits (788), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 153/261 (58%), Positives = 198/261 (75%), Gaps = 1/261 (0%) Query: 1 MWELRSIAFSRAVFAEFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLGIGTLVQALG 60 MWELRS +F RA+ AEF A+L +VFFGLG++L W VLQ+A+AFGL + TLVQA+G Sbjct: 1 MWELRSASFWRAICAEFFASLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVG 60 Query: 61 HISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNA 120 HISGAH+NPAVT A LVG +S+LRA Y+ AQLLGAVAGAA+L+ +TP +RG+LA+N Sbjct: 61 HISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNT 120 Query: 121 LSNSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGIHYTG 180 L + GQA VE+FLTLQ VLCIFA+ DERR G+ AL++GFS+ LGHL G++YTG Sbjct: 121 LHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTG 180 Query: 181 CSMNPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNYVLFPPAKSLSERLAVLKGL 240 MNPARS APA++T F +HWV+W+GP++GA LGSLLY+++LFP KS+SERL++LKG Sbjct: 181 AGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPRLKSVSERLSILKGS 240 Query: 241 EPDTDWEEREVRRRQSVELHS 261 P + EV + VEL + Sbjct: 241 RPSESNGQPEV-TGEPVELKT 260 >3M9I-A nrPDB Length = 220 Score = 278 bits (711), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 135/218 (61%), Positives = 172/218 (78%) Query: 8 AFSRAVFAEFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLGIGTLVQALGHISGAHI 67 +F RA+FAEF ATL +VFFGLG++L W VLQ+A+AFGL + TLVQA+GHISGAH+ Sbjct: 2 SFWRAIFAEFFATLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAHV 61 Query: 68 NPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNALSNSTTA 127 NPAVT A LVG +S+LRA YV AQLLGAVAGAA+L+ +TP +RG+LA+N L + Sbjct: 62 NPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSV 121 Query: 128 GQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGIHYTGCSMNPAR 187 GQA VE+FLTLQ VLCIFA+ DERR G+ AL++GFS+ LGHL G++YTG MNPAR Sbjct: 122 GQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTGAGMNPAR 181 Query: 188 SLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNYVLFP 225 S APA++T F +HWV+W+GP++GA LGSLLY+++LFP Sbjct: 182 SFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFP 219 >1J4N-A nrPDB Length = 271 Score = 237 bits (604), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 120/266 (45%), Positives = 174/266 (65%), Gaps = 10/266 (3%) Query: 3 ELRSIAFSRAVFAEFLATLLFVFFGLGSAL--NWP-------QALPSVLQIAMAFGLGIG 53 E + F RAV AEFLA +LF+F +GSAL ++P A+ +++++AFGL I Sbjct: 4 EFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIA 63 Query: 54 TLVQALGHISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIR 113 TL Q++GHISGAH+NPAVT+ L+ C +SVLRA Y+ AQ +GA+ A+L IT + Sbjct: 64 TLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPD 123 Query: 114 GDLAVNALSNSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHL 173 L +NAL+ +GQ + +E+ TLQLVLC+ A+TD RR + G+ L+IGFSVALGHL Sbjct: 124 NSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSGPLAIGFSVALGHL 183 Query: 174 LGIHYTGCSMNPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNYVLFPPAKSLSER 233 L I YTGC +NPARS +V+T F DHW+FW+GP +GA L L+Y+++L P + L++R Sbjct: 184 LAIDYTGCGINPARSFGSSVITHNFQDHWIFWVGPFIGAALAVLIYDFILAPRSSDLTDR 243 Query: 234 LAV-LKGLEPDTDWEEREVRRRQSVE 258 + V G + D + ++ R ++ Sbjct: 244 VKVWTSGQVEEYDLDADDINSRVEMK 269 >1IH5-A nrPDB Length = 269 Score = 234 bits (597), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 117/264 (44%), Positives = 168/264 (63%), Gaps = 8/264 (3%) Query: 3 ELRSIAFSRAVFAEFLATLLFVFFGLGSAL-------NWPQALPSVLQIAMAFGLGIGTL 55 E + F RAV AEFLAT LFVF +GSAL N A+ +++++AFGL I TL Sbjct: 4 EFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATL 63 Query: 56 VQALGHISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGD 115 Q++GHISGAH+NPAVT+ L+ C +S+ RA Y+ AQ +GA+ A+L IT + Sbjct: 64 AQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNS 123 Query: 116 LAVNALSNSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLG 175 L N L++ +GQ + +E+ TLQLVLC+ A+TD RR + G+ L+IG SVALGHLL Sbjct: 124 LGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGHLLA 183 Query: 176 IHYTGCSMNPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNYVLFPPAKSLSERLA 235 I YTGC +NPARS AV+T F +HW+FW+GP +G L L+Y+++L P + L++R+ Sbjct: 184 IDYTGCGINPARSFGSAVITHNFSNHWIFWVGPFIGGALAVLIYDFILAPRSSDLTDRVK 243 Query: 236 V-LKGLEPDTDWEEREVRRRQSVE 258 V G + D + ++ R ++ Sbjct: 244 VWTSGQVEEYDLDADDINSRVEMK 267 >2ZZ9-A nrPDB Length = 301 Score = 233 bits (594), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 116/231 (50%), Positives = 157/231 (67%), Gaps = 5/231 (2%) Query: 8 AFSRAVFAEFLATLLFVFFGLGSALNW---PQALP-SVLQIAMAFGLGIGTLVQALGHIS 63 AF +AV AEFLA L+FV +GS +NW LP ++ I++ FGL I T+VQ GHIS Sbjct: 11 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHIS 70 Query: 64 GAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNALSN 123 G HINPAVTVA + +S+ ++ FY+ AQ LGA+ GA +L+ +TP + G L V + Sbjct: 71 GGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHG 130 Query: 124 STTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGIHYTGCSM 183 + TAG + VEL +T QLV IFAS D++R + G+ AL+IGFSVA+GHL I+YTG SM Sbjct: 131 NLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTGSVALAIGFSVAIGHLFAINYTGASM 190 Query: 184 NPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNYVLFPPAKSLSERL 234 NPARS PAV+ G +++HW++W+GP++GA+L LY YV F P L RL Sbjct: 191 NPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYV-FCPDVELKRRL 240 >3IYZ-A nrPDB Length = 340 Score = 233 bits (593), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 116/231 (50%), Positives = 157/231 (67%), Gaps = 5/231 (2%) Query: 8 AFSRAVFAEFLATLLFVFFGLGSALNW---PQALP-SVLQIAMAFGLGIGTLVQALGHIS 63 AF +AV AEFLA L+FV +GS +NW LP ++ I++ FGL I T+VQ GHIS Sbjct: 50 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHIS 109 Query: 64 GAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNALSN 123 G HINPAVTVA + +S+ ++ FY+ AQ LGA+ GA +L+ +TP + G L V + Sbjct: 110 GGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHG 169 Query: 124 STTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGIHYTGCSM 183 + TAG + VEL +T QLV IFAS D++R + G+ AL+IGFSVA+GHL I+YTG SM Sbjct: 170 NLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTGSVALAIGFSVAIGHLFAINYTGASM 229 Query: 184 NPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNYVLFPPAKSLSERL 234 NPARS PAV+ G +++HW++W+GP++GA+L LY YV F P L RL Sbjct: 230 NPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYV-FCPDVELKRRL 279 >3GD8-A nrPDB Length = 223 Score = 229 bits (585), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 114/222 (51%), Positives = 154/222 (69%), Gaps = 4/222 (1%) Query: 8 AFSRAVFAEFLATLLFVFFGLGSALNW---PQALP-SVLQIAMAFGLGIGTLVQALGHIS 63 AF +AV AEFLA L+FV LGS +NW + LP ++ I++ FGL I T+VQ GHIS Sbjct: 2 AFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHIS 61 Query: 64 GAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNALSN 123 G HINPAVTVA + +S+ ++ FY+AAQ LGA+ GA +L+ +TP + G L V + Sbjct: 62 GGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTMVHG 121 Query: 124 STTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGIHYTGCSM 183 + TAG + VEL +T QLV IFAS D +R + G+ AL+IGFSVA+GHL I+YTG SM Sbjct: 122 NLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIALAIGFSVAIGHLFAINYTGASM 181 Query: 184 NPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNYVLFP 225 NPARS PAV+ G +++HW++W+GP++GA+L LY YV P Sbjct: 182 NPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYVFCP 223 >5I32-A nrPDB Length = 275 Score = 137 bits (345), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 91/230 (39%), Positives = 128/230 (55%), Gaps = 19/230 (8%) Query: 6 SIAFSRAVFAEFLATLLFVFFGLGSALNWPQ-------ALPSVLQIAMAFGLGIGTLVQA 58 S+A RA AEF++TLLFVF G+GSA+ + + P ++ IA+ G + V Sbjct: 39 SLASLRAYLAEFISTLLFVFAGVGSAIAYAKLTSDAALDTPGLVAIAVCHGFALFVAVAI 98 Query: 59 LGHISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAV 118 +ISG H+NPAVT VG ++V+ FY AQLLG+ A LL +T G LAV Sbjct: 99 GANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLKYVT-----GGLAV 153 Query: 119 NALSNSTTAG----QAVTVELFLTLQLVLCIFASTDERRGENPGTPA-LSIGFSVALGHL 173 ++S AG + V +E+ +T LV ++A+ + + + GT A L+IG V L Sbjct: 154 P--THSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGSLGTIAPLAIGLIVGANIL 211 Query: 174 LGIHYTGCSMNPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNYVL 223 ++G SMNPARS PAV G F HWV+W+GPL+G L L+Y V Sbjct: 212 AAGPFSGGSMNPARSFGPAVAAGDFSGHWVYWVGPLIGGGLAGLIYGNVF 261 >3CLL-A nrPDB Length = 300 Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 88/235 (37%), Positives = 124/235 (52%), Gaps = 15/235 (6%) Query: 3 ELRSIAFSRAVFAEFLATLLFVFFGLGSALNWPQALP-----SVLQIAMAFGLGIGTLVQ 57 EL+ +F RA AEF+ATLLF++ + + + + +L IA AFG I LV Sbjct: 50 ELKLWSFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVY 109 Query: 58 ALGHISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEIT--PADIRGD 115 ISG HINPAVT + V +LRA Y+ AQ LGA+ G L+ P + G Sbjct: 110 CTAGISGGHINPAVTFGLFLARKVELLRALVYMIAQCLGAICGVGLVKAFMKGPYNQFGG 169 Query: 116 LAVNALSNSTTAGQAVTVELFLTLQLVLCIFASTDERRGEN----PGTPALSIGFSVALG 171 A N+++ G A+ E+ T LV +F++TD +R P L IGF+V + Sbjct: 170 GA-NSVALGYNKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPILAPLPIGFAVFMV 228 Query: 172 HLLGIHYTGCSMNPARSLAPAVVTGK---FDDHWVFWIGPLVGAILGSLLYNYVL 223 HL I TG +NPARS AV+ +DD W+FW+GP +GA + + + YVL Sbjct: 229 HLATIPITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVL 283 >2O9F-A nrPDB Length = 234 Score = 94.4 bits (233), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 73/209 (34%), Positives = 101/209 (48%), Gaps = 16/209 (7%) Query: 11 RAVFAEFLATLLFVFFGLGSAL---NWPQALPSVLQIAMAFGLGIGTLVQALGHISGAHI 67 R + AE T VF G GSA+ +P+ +A+AFGL + T+ A+GHISG H Sbjct: 6 RKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHF 65 Query: 68 NPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGD-----LAVNALS 122 NPAVT+ G YV AQ++G + AALL+ I D A N Sbjct: 66 NPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYG 125 Query: 123 NSTTAG----QAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGIHY 178 + G A+ VEL L+ +L I +TD+ G ++IG + L HL+ I Sbjct: 126 EHSPGGYSMLSALVVELVLSAGFLLVIHGATDKF--APAGFAPIAIGLACTLIHLISIPV 183 Query: 179 TGCSMNPARSLAPAVVTGKF--DDHWVFW 205 T S+NPARS A A+ G + + W FW Sbjct: 184 TNTSVNPARSTAVAIFQGGWALEQLWFFW 212 >3LLQ-A nrPDB Length = 256 Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 77/229 (33%), Positives = 112/229 (48%), Gaps = 14/229 (6%) Query: 4 LRSIAFSRAVFAEFLATLLFVFFGLGSAL---NWPQALPSVLQIAMAFGLGIGTLVQALG 60 +S R + AEF T VF G GSA+ +P+ +A+AFGL + T+ A+G Sbjct: 24 FQSYVMGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVG 83 Query: 61 HISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDL---A 117 ISG H NPAV+V V YV AQ+ GA+ AA L+ I DL A Sbjct: 84 GISGGHFNPAVSVGLTVAGRFPASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFA 143 Query: 118 VNALSNSTTAG----QAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHL 173 N + G A+ +E+ LT ++ I ST R G ++IG ++ L HL Sbjct: 144 SNGYGEHSPGGYSLVSALLIEIILTAFFLIVILGSTHGRV--PAGFAPIAIGLALTLIHL 201 Query: 174 LGIHYTGCSMNPARSLAPAVVTGKF--DDHWVFWIGPLVGAILGSLLYN 220 + I T S+NPARS A+ G + W+FW+ P+VG G++++ Sbjct: 202 ISIPVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPIVGGAAGAVIWK 250 >2W1P-A nrPDB Length = 279 Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 64/213 (30%), Positives = 103/213 (48%), Gaps = 14/213 (6%) Query: 12 AVFAEFLATLLFVF--FGLGSALNWPQALPS-------VLQIAMAFGLGIGTLVQALGHI 62 A+ EF+ T LF++ F + N P ++ I+ FG G+ V + Sbjct: 47 AMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRV 106 Query: 63 SGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNALS 122 SG ++NPAVT+A ++ + R Q++ +A A +TP +I NAL Sbjct: 107 SGGNLNPAVTLALVLARAIPPFRGILMAFTQIVAGMAAAGAASAMTPGEIA---FANALG 163 Query: 123 NSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGIHYTGCS 182 + + + +E F T L L + E+ P IG ++ + HL+ I+YTG Sbjct: 164 GGASRTRGLFLEAFGTAILCLTVLMLAVEKHRATWFAP-FVIGIALLIAHLICIYYTGAG 222 Query: 183 MNPARSLAPAVVTGKFDD-HWVFWIGPLVGAIL 214 +NPARS PAV F + HW++W+GP++GA L Sbjct: 223 LNPARSFGPAVAARSFPNYHWIYWLGPILGAFL 255 >3NE2-A nrPDB Length = 246 Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 81/245 (33%), Positives = 114/245 (46%), Gaps = 31/245 (12%) Query: 6 SIAFSRAVFAEFLATLLFVFFGLGSAL---------NWPQALPSV----------LQIAM 46 ++ ++ AE + T + VFFG G+A+ + P I M Sbjct: 2 TMTLAKRFTAEVVGTFILVFFGPGAAVITLMIANGADKPNEFNIGIGALGGLGDWFAIGM 61 Query: 47 AFGLGIGTLVQALGHISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAAL-LH 105 AF L I ++ +LG ISGAHINPAVT+A Y+ AQ +GA G+ L L Sbjct: 62 AFALAIAAVIYSLGRISGAHINPAVTIALWSIGRFPGREVVPYIVAQFIGAALGSLLFLA 121 Query: 106 EITPADIR-GDLAVNALSNSTTAGQAVTVELFLTLQLVLCIFA-STDERRGENPGTPALS 163 + PA G L A GQA+ E T L+L I + DER PG L Sbjct: 122 CVGPAAATVGGLGATAPFPGIGYGQAILTEAIGTFLLMLVIMGVAVDER--APPGFAGLV 179 Query: 164 IGFSVALGHLLGI-HYTGCSMNPARSLAPAVVTGKFD-DHW----VFWIGPLVGAILGSL 217 IG +V G + I + TG S+NPAR+ P + + W ++ IGP+VGA+ + Sbjct: 180 IGLTVG-GIITTIGNITGSSLNPARTFGPYLGDSLMGINLWQYFPIYVIGPIVGAVAAAW 238 Query: 218 LYNYV 222 LYNY+ Sbjct: 239 LYNYL 243 >2EVU-A nrPDB Length = 246 Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 78/249 (31%), Positives = 114/249 (45%), Gaps = 40/249 (16%) Query: 7 IAFSRAVFAEFLATLLFVFFGLGSAL---------NWPQALPSV----------LQIAMA 47 ++ ++ AEF+ T + VFFG GSA P + I +A Sbjct: 2 VSLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLA 61 Query: 48 FGLGIGTLVQALGHISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEI 107 FG I + ALG+ISG HINPAVT+ Y+ AQLLGA G+ + + Sbjct: 62 FGFAIAASIYALGNISGCHINPAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQC 121 Query: 108 T--PADIRGDLAVNALSNSTTAGQAVTVELFLTLQLVLCIFA-STDERRGENPGTPALSI 164 A G L A + QA+ E+ T L++ I + DER + G + I Sbjct: 122 AGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIMGIAVDERAPK--GFAGIII 179 Query: 165 GFSVA-----LGHLLGIHYTGCSMNPARSLAPAVVTGKF--DDHWVFW----IGPLVGAI 213 G +VA LG++ +G S+NPAR+ P + F D W ++ IGP+VGA+ Sbjct: 180 GLTVAGIITTLGNI-----SGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAV 234 Query: 214 LGSLLYNYV 222 L +L Y Y+ Sbjct: 235 LAALTYQYL 243 >1LDI-A nrPDB Length = 281 Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 83/270 (30%), Positives = 128/270 (47%), Gaps = 39/270 (14%) Query: 15 AEFLATLLFVFFGLG--SALNWPQALPSVLQIAMAFGLGIGTLVQALGHISGAHINPAVT 72 AEFL T L +FFG+G +AL A +I++ +GLG+ + +SGAH+NPAVT Sbjct: 13 AEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIWGLGVAMAIYLTAGVSGAHLNPAVT 72 Query: 73 VACLVGCHVSVLRAAFYVAAQLLGAVAGAALLH----------EITPADIRGDLAVNALS 122 +A + + ++ +Q+ GA AAL++ E T +RG + L+ Sbjct: 73 IALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLA 132 Query: 123 NSTTAG--------QAVTVELFLTLQLVLCIFASTDERRGENPGTPA-LSIGFSVA-LGH 172 + + QA VE+ +T L+ I A TD+ G G A L IG +A +G Sbjct: 133 GTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRGPLAPLLIGLLIAVIGA 192 Query: 173 LLGIHYTGCSMNPARSLAPAV-----------VTGKFDDHW--VFWIGPLVGAILGSLLY 219 +G TG +MNPAR P V TG D + V GP+VGAI+G+ Y Sbjct: 193 SMG-PLTGFAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAY 251 Query: 220 NYVLFPPAKSLSERLAVLKGLEPDTDWEER 249 ++ + L + V++ E T E++ Sbjct: 252 RKLI---GRHLPCDICVVEEKETTTPSEQK 278 >6F7H-A nrPDB Length = 301 Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 76/298 (25%), Positives = 125/298 (41%), Gaps = 55/298 (18%) Query: 3 ELRSIAFSRAVFAEFLATLLFVFFGLGS---ALNWPQALPSVLQIAMAFGLGIGTLVQAL 59 +RS+ +R AEFL + + G+ A+ + + + +A L + + Sbjct: 15 RIRSL-LARQCLAEFLGVFVLMLLTQGAVAQAVTSGETKGNFFTMFLAGSLAVTIAIYVG 73 Query: 60 GHISGAHINPAVTVA-CLVGCHVSVLRAAFYVAAQLLGAVAGAA----LLHEITPADIRG 114 G++SGAH+NPA ++A C+VG + ++ Y+ QLL A + L H+ G Sbjct: 74 GNVSGAHLNPAFSLAMCIVG-RLPWVKLPIYILVQLLSAFCASGATYVLYHDALQNYTGG 132 Query: 115 DLAVNALSNSTTAGQAVTVELFLTLQ------------LVLCIFASTDERRGENPGTPA- 161 +L V T + A +L+L L++ + A D R N G PA Sbjct: 133 NLTVTG-PKETASIFATYPAPYLSLNNGFLDQVLGTGMLIVGLLAILDRR---NKGVPAG 188 Query: 162 ---LSIGFSV-ALGHLLGIHYTGCSMNPARSL-----------APAVVTGKFDDHWVFWI 206 + +G + ALG +G + G +NPAR L P V + WV + Sbjct: 189 LEPVVVGMLILALGLSMGAN-CGIPLNPARDLGPRLFTYVAGWGPEVFSAGNGWWWVPVV 247 Query: 207 GPLVGAILGSLLYNYVLFPPAKSLSERLAVLKGLEPDTDWEEREVRRRQSVELHSPQS 264 PLVGA +G+ Y ++ L +G EP D + ++ EL +P S Sbjct: 248 APLVGATVGTATYQLLV---------ALHHPEGPEPAQDLVSAQ---HKASELETPAS 293 >3C02-A nrPDB Length = 258 Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 61/239 (25%), Positives = 101/239 (42%), Gaps = 23/239 (9%) Query: 8 AFSRAVFAEFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLGI----GTLVQALGHIS 63 ++ R EFL T + +F G G+ N+ S + G G+ G LV A +S Sbjct: 8 SYVREFIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSA--KLS 65 Query: 64 GAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADI-RGDLAVNALS 122 GAH+N AV++ + + Y AQLLGA G + ++ + I + A Sbjct: 66 GAHLNLAVSIGLSSINKFDLKKIPVYFFAQLLGAFVGTSTVYGLYHGFISNSKIPQFAWE 125 Query: 123 NSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHL---LGIHY- 178 S ++T F L L + EN + S +G + +GI + Sbjct: 126 TSRNPSISLTGAFFNELILTGILLLVILVVVDENICGKFHILKLSSVVGLIILCIGITFG 185 Query: 179 --TGCSMNPARSLAPAVVT----GK---FDDHWVFW---IGPLVGAILGSLLYNYVLFP 225 TG ++NP+R L ++ GK D++ FW + P VG+++ Y+ V+ P Sbjct: 186 GNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQFYDKVICP 244 >2GTT-A nrPDB Length = 450 Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust. Identities = 20/67 (29%), Positives = 25/67 (37%), Gaps = 1/67 (1%) Query: 167 SVALGHLLG-IHYTGCSMNPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNYVLFP 225 S A+GH+ IH+ GC M RSL V+ G L G + F Sbjct: 302 SNAVGHVFNLIHFVGCYMGQVRSLNATVIAACAPHEMSVLGGYLGEEFFGKGTFERRFFR 361 Query: 226 PAKSLSE 232 K L E Sbjct: 362 DEKELQE 368 >4OBT-A nrPDB Length = 257 Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust. Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 11/83 (13%) Query: 82 SVLRAAFYVAAQLLGAVAGAALLHEIT---------PADIRGDLAVNALSNSTT--AGQA 130 S LR+ F+VAAQ G A E++ P I G A+ N ++ G Sbjct: 57 STLRSDFFVAAQNCWVKKGGAFTGEVSAEMLVNLDIPWVILGHSERRAILNESSEFVGDK 116 Query: 131 VTVELFLTLQLVLCIFASTDERR 153 V L L+++ C+ + +ER Sbjct: 117 VAYALAQGLKVIACVGETLEERE 139 >5JRH-A nrPDB Length = 660 Score = 27.3 bits (59), Expect = 7.4, Method: Compositional matrix adjust. Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Query: 223 LFPPAKSLSERLAVLKGLEPDTDWEE-REVRRRQSVELHSPQSLPRGTKA 271 L P + E + VLK D DW+E R++ R +E SP+ P A Sbjct: 206 LKNPNVTSVEHVIVLKRTGSDIDWQEGRDLWWRDLIEKASPEHQPEAMNA 255 >4FC4-A nrPDB Length = 261 Score = 26.9 bits (58), Expect = 9.4, Method: Compositional matrix adjust. Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 3/43 (6%) Query: 205 WIGPLVGAILGSLLYNY---VLFPPAKSLSERLAVLKGLEPDT 244 W+G LVG++ +LLY++ L P S+ +A+ K P T Sbjct: 109 WLGNLVGSVFVALLYSWGGGSLLPVDTSIVHSVALAKTTAPAT 151 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4OJ2-X nrPDB 361 e-100 1YMG-A nrPDB 306 7e-84 4NEF-A nrPDB 300 3e-82 1IH5-A nrPDB 300 4e-82 1J4N-A nrPDB 298 1e-81 3D9S-A nrPDB 292 1e-79 3IYZ-A nrPDB 285 2e-77 2ZZ9-A nrPDB 284 2e-77 3M9I-A nrPDB 260 6e-70 3GD8-A nrPDB 259 1e-69 3CLL-A nrPDB 218 2e-57 1LDI-A nrPDB 190 7e-49 5I32-A nrPDB 189 1e-48 2EVU-A nrPDB 181 3e-46 6F7H-A nrPDB 180 4e-46 3C02-A nrPDB 180 8e-46 2W1P-A nrPDB 178 3e-45 3LLQ-A nrPDB 175 2e-44 3NE2-A nrPDB 170 6e-43 2O9F-A nrPDB 169 1e-42 Sequences not found previously or not previously below threshold: 5Z7D-A nrPDB 28 5.5 5YZW-A nrPDB 28 5.5 5AGS-A nrPDB 27 8.8 CONVERGED! >4OJ2-X nrPDB Length = 274 Score = 361 bits (926), Expect = e-100, Method: Composition-based stats. Identities = 270/271 (99%), Positives = 271/271 (100%) Query: 1 MWELRSIAFSRAVFAEFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLGIGTLVQALG 60 MWELRSIAFSRAVFAEFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLGIGTLVQALG Sbjct: 4 MWELRSIAFSRAVFAEFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLGIGTLVQALG 63 Query: 61 HISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNA 120 HISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNA Sbjct: 64 HISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNA 123 Query: 121 LSNSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGIHYTG 180 LSNSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGIHYTG Sbjct: 124 LSNSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGIHYTG 183 Query: 181 CSMNPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNYVLFPPAKSLSERLAVLKGL 240 CSMNPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNYVLFPPAKSLSERLAVLKGL Sbjct: 184 CSMNPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNYVLFPPAKSLSERLAVLKGL 243 Query: 241 EPDTDWEEREVRRRQSVELHSPQSLPRGTKA 271 EPDTDWEEREVRRRQ+VELHSPQSLPRGTKA Sbjct: 244 EPDTDWEEREVRRRQAVELHSPQSLPRGTKA 274 >1YMG-A nrPDB Length = 263 Score = 306 bits (784), Expect = 7e-84, Method: Composition-based stats. Identities = 153/263 (58%), Positives = 198/263 (75%), Gaps = 1/263 (0%) Query: 1 MWELRSIAFSRAVFAEFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLGIGTLVQALG 60 MWELRS +F RA+ AEF A+L +VFFGLG++L W VLQ+A+AFGL + TLVQA+G Sbjct: 1 MWELRSASFWRAICAEFFASLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVG 60 Query: 61 HISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNA 120 HISGAH+NPAVT A LVG +S+LRA Y+ AQLLGAVAGAA+L+ +TP +RG+LA+N Sbjct: 61 HISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNT 120 Query: 121 LSNSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGIHYTG 180 L + GQA VE+FLTLQ VLCIFA+ DERR G+ AL++GFS+ LGHL G++YTG Sbjct: 121 LHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTG 180 Query: 181 CSMNPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNYVLFPPAKSLSERLAVLKGL 240 MNPARS APA++T F +HWV+W+GP++GA LGSLLY+++LFP KS+SERL++LKG Sbjct: 181 AGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPRLKSVSERLSILKGS 240 Query: 241 EPDTDWEEREVRRRQSVELHSPQ 263 P + EV + VEL + Sbjct: 241 RPSESNGQPEV-TGEPVELKTQA 262 >4NEF-A nrPDB Length = 242 Score = 300 bits (769), Expect = 3e-82, Method: Composition-based stats. Identities = 240/240 (100%), Positives = 240/240 (100%) Query: 3 ELRSIAFSRAVFAEFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLGIGTLVQALGHI 62 ELRSIAFSRAVFAEFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLGIGTLVQALGHI Sbjct: 3 ELRSIAFSRAVFAEFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLGIGTLVQALGHI 62 Query: 63 SGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNALS 122 SGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNALS Sbjct: 63 SGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNALS 122 Query: 123 NSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGIHYTGCS 182 NSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGIHYTGCS Sbjct: 123 NSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGIHYTGCS 182 Query: 183 MNPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNYVLFPPAKSLSERLAVLKGLEP 242 MNPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNYVLFPPAKSLSERLAVLKGLEP Sbjct: 183 MNPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNYVLFPPAKSLSERLAVLKGLEP 242 >1IH5-A nrPDB Length = 269 Score = 300 bits (768), Expect = 4e-82, Method: Composition-based stats. Identities = 116/264 (43%), Positives = 168/264 (63%), Gaps = 8/264 (3%) Query: 3 ELRSIAFSRAVFAEFLATLLFVFFGLGSALNW-------PQALPSVLQIAMAFGLGIGTL 55 E + F RAV AEFLAT LFVF +GSAL + A+ +++++AFGL I TL Sbjct: 4 EFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATL 63 Query: 56 VQALGHISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGD 115 Q++GHISGAH+NPAVT+ L+ C +S+ RA Y+ AQ +GA+ A+L IT + Sbjct: 64 AQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNS 123 Query: 116 LAVNALSNSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLG 175 L N L++ +GQ + +E+ TLQLVLC+ A+TD RR + G+ L+IG SVALGHLL Sbjct: 124 LGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGHLLA 183 Query: 176 IHYTGCSMNPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNYVLFPPAKSLSERLA 235 I YTGC +NPARS AV+T F +HW+FW+GP +G L L+Y+++L P + L++R+ Sbjct: 184 IDYTGCGINPARSFGSAVITHNFSNHWIFWVGPFIGGALAVLIYDFILAPRSSDLTDRVK 243 Query: 236 V-LKGLEPDTDWEEREVRRRQSVE 258 V G + D + ++ R ++ Sbjct: 244 VWTSGQVEEYDLDADDINSRVEMK 267 >1J4N-A nrPDB Length = 271 Score = 298 bits (764), Expect = 1e-81, Method: Composition-based stats. Identities = 119/266 (44%), Positives = 172/266 (64%), Gaps = 10/266 (3%) Query: 3 ELRSIAFSRAVFAEFLATLLFVFFGLGSALNWP---------QALPSVLQIAMAFGLGIG 53 E + F RAV AEFLA +LF+F +GSAL + A+ +++++AFGL I Sbjct: 4 EFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIA 63 Query: 54 TLVQALGHISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIR 113 TL Q++GHISGAH+NPAVT+ L+ C +SVLRA Y+ AQ +GA+ A+L IT + Sbjct: 64 TLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPD 123 Query: 114 GDLAVNALSNSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHL 173 L +NAL+ +GQ + +E+ TLQLVLC+ A+TD RR + G+ L+IGFSVALGHL Sbjct: 124 NSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSGPLAIGFSVALGHL 183 Query: 174 LGIHYTGCSMNPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNYVLFPPAKSLSER 233 L I YTGC +NPARS +V+T F DHW+FW+GP +GA L L+Y+++L P + L++R Sbjct: 184 LAIDYTGCGINPARSFGSSVITHNFQDHWIFWVGPFIGAALAVLIYDFILAPRSSDLTDR 243 Query: 234 LAV-LKGLEPDTDWEEREVRRRQSVE 258 + V G + D + ++ R ++ Sbjct: 244 VKVWTSGQVEEYDLDADDINSRVEMK 269 >3D9S-A nrPDB Length = 266 Score = 292 bits (747), Expect = 1e-79, Method: Composition-based stats. Identities = 171/261 (65%), Positives = 214/261 (81%), Gaps = 2/261 (0%) Query: 3 ELRSIAFSRAVFAEFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLGIGTLVQALGHI 62 E+ S+AF +AVFAEFLATL+FVFFGLGSAL WP ALP++LQIA+AFGL IGTL QALG + Sbjct: 5 EVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPV 64 Query: 63 SGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNALS 122 SG HINPA+T+A LVG +S+LRA FYVAAQL+GA+AGA +L+ + P + RG+LAVNAL+ Sbjct: 65 SGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALN 124 Query: 123 NSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGIHYTGCS 182 N+TT GQA+ VEL LT QL LCIFASTD RR G+PALSIG SV LGHL+GI++TGCS Sbjct: 125 NNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTGCS 184 Query: 183 MNPARSLAPAVVTGKFDD-HWVFWIGPLVGAILGSLLYNYVLFPPAKSLSERLAVLKG-L 240 MNPARS PAVV +F HWVFW+GP+VGA+L ++LY Y+LFP + SLSER+A++KG Sbjct: 185 MNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLSLSERVAIIKGTY 244 Query: 241 EPDTDWEEREVRRRQSVELHS 261 EPD DWEE+ R++++EL + Sbjct: 245 EPDEDWEEQREERKKTMELTT 265 >3IYZ-A nrPDB Length = 340 Score = 285 bits (729), Expect = 2e-77, Method: Composition-based stats. Identities = 113/234 (48%), Positives = 155/234 (66%), Gaps = 5/234 (2%) Query: 6 SIAFSRAVFAEFLATLLFVFFGLGSALNWP----QALPSVLQIAMAFGLGIGTLVQALGH 61 + AF +AV AEFLA L+FV +GS +NW ++ I++ FGL I T+VQ GH Sbjct: 48 TQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGH 107 Query: 62 ISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNAL 121 ISG HINPAVTVA + +S+ ++ FY+ AQ LGA+ GA +L+ +TP + G L V + Sbjct: 108 ISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTV 167 Query: 122 SNSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGIHYTGC 181 + TAG + VEL +T QLV IFAS D++R + G+ AL+IGFSVA+GHL I+YTG Sbjct: 168 HGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTGSVALAIGFSVAIGHLFAINYTGA 227 Query: 182 SMNPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNYVLFPPAKSLSERLA 235 SMNPARS PAV+ G +++HW++W+GP++GA+L LY YV P L RL Sbjct: 228 SMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCP-DVELKRRLK 280 >2ZZ9-A nrPDB Length = 301 Score = 284 bits (728), Expect = 2e-77, Method: Composition-based stats. Identities = 113/234 (48%), Positives = 155/234 (66%), Gaps = 5/234 (2%) Query: 6 SIAFSRAVFAEFLATLLFVFFGLGSALNWP----QALPSVLQIAMAFGLGIGTLVQALGH 61 + AF +AV AEFLA L+FV +GS +NW ++ I++ FGL I T+VQ GH Sbjct: 9 TQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGH 68 Query: 62 ISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNAL 121 ISG HINPAVTVA + +S+ ++ FY+ AQ LGA+ GA +L+ +TP + G L V + Sbjct: 69 ISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTV 128 Query: 122 SNSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGIHYTGC 181 + TAG + VEL +T QLV IFAS D++R + G+ AL+IGFSVA+GHL I+YTG Sbjct: 129 HGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTGSVALAIGFSVAIGHLFAINYTGA 188 Query: 182 SMNPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNYVLFPPAKSLSERLA 235 SMNPARS PAV+ G +++HW++W+GP++GA+L LY YV P L RL Sbjct: 189 SMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCP-DVELKRRLK 241 >3M9I-A nrPDB Length = 220 Score = 260 bits (664), Expect = 6e-70, Method: Composition-based stats. Identities = 135/219 (61%), Positives = 172/219 (78%) Query: 8 AFSRAVFAEFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLGIGTLVQALGHISGAHI 67 +F RA+FAEF ATL +VFFGLG++L W VLQ+A+AFGL + TLVQA+GHISGAH+ Sbjct: 2 SFWRAIFAEFFATLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAHV 61 Query: 68 NPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNALSNSTTA 127 NPAVT A LVG +S+LRA YV AQLLGAVAGAA+L+ +TP +RG+LA+N L + Sbjct: 62 NPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSV 121 Query: 128 GQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGIHYTGCSMNPAR 187 GQA VE+FLTLQ VLCIFA+ DERR G+ AL++GFS+ LGHL G++YTG MNPAR Sbjct: 122 GQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTGAGMNPAR 181 Query: 188 SLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNYVLFPP 226 S APA++T F +HWV+W+GP++GA LGSLLY+++LFP Sbjct: 182 SFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPR 220 >3GD8-A nrPDB Length = 223 Score = 259 bits (661), Expect = 1e-69, Method: Composition-based stats. Identities = 112/222 (50%), Positives = 151/222 (68%), Gaps = 4/222 (1%) Query: 8 AFSRAVFAEFLATLLFVFFGLGSALNWPQA----LPSVLQIAMAFGLGIGTLVQALGHIS 63 AF +AV AEFLA L+FV LGS +NW ++ I++ FGL I T+VQ GHIS Sbjct: 2 AFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHIS 61 Query: 64 GAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNALSN 123 G HINPAVTVA + +S+ ++ FY+AAQ LGA+ GA +L+ +TP + G L V + Sbjct: 62 GGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTMVHG 121 Query: 124 STTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGIHYTGCSM 183 + TAG + VEL +T QLV IFAS D +R + G+ AL+IGFSVA+GHL I+YTG SM Sbjct: 122 NLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIALAIGFSVAIGHLFAINYTGASM 181 Query: 184 NPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNYVLFP 225 NPARS PAV+ G +++HW++W+GP++GA+L LY YV P Sbjct: 182 NPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYVFCP 223 >3CLL-A nrPDB Length = 300 Score = 218 bits (556), Expect = 2e-57, Method: Composition-based stats. Identities = 85/234 (36%), Positives = 121/234 (51%), Gaps = 13/234 (5%) Query: 3 ELRSIAFSRAVFAEFLATLLFVFFGLGSALNWPQALP-----SVLQIAMAFGLGIGTLVQ 57 EL+ +F RA AEF+ATLLF++ + + + + +L IA AFG I LV Sbjct: 50 ELKLWSFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVY 109 Query: 58 ALGHISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEIT-PADIRGDL 116 ISG HINPAVT + V +LRA Y+ AQ LGA+ G L+ + Sbjct: 110 CTAGISGGHINPAVTFGLFLARKVELLRALVYMIAQCLGAICGVGLVKAFMKGPYNQFGG 169 Query: 117 AVNALSNSTTAGQAVTVELFLTLQLVLCIFASTDERRGEN----PGTPALSIGFSVALGH 172 N+++ G A+ E+ T LV +F++TD +R P L IGF+V + H Sbjct: 170 GANSVALGYNKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPILAPLPIGFAVFMVH 229 Query: 173 LLGIHYTGCSMNPARSLAPAVVTGK---FDDHWVFWIGPLVGAILGSLLYNYVL 223 L I TG +NPARS AV+ +DD W+FW+GP +GA + + + YVL Sbjct: 230 LATIPITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVL 283 >1LDI-A nrPDB Length = 281 Score = 190 bits (482), Expect = 7e-49, Method: Composition-based stats. Identities = 79/279 (28%), Positives = 124/279 (44%), Gaps = 37/279 (13%) Query: 5 RSIAFSRAVFAEFLATLLFVFFGLG--SALNWPQALPSVLQIAMAFGLGIGTLVQALGHI 62 ++ AEFL T L +FFG+G +AL A +I++ +GLG+ + + Sbjct: 3 QTSTLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIWGLGVAMAIYLTAGV 62 Query: 63 SGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEI----------TPADI 112 SGAH+NPAVT+A + + ++ +Q+ GA AAL++ + T + Sbjct: 63 SGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIV 122 Query: 113 RGDLAVNALS--------NSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGT-PALS 163 RG + L+ QA VE+ +T L+ I A TD+ G G L Sbjct: 123 RGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRGPLAPLL 182 Query: 164 IGFSVALGHLLGIHYTGCSMNPARSLAPAV-----------VTGKFDDHW--VFWIGPLV 210 IG +A+ TG +MNPAR P V TG D + V GP+V Sbjct: 183 IGLLIAVIGASMGPLTGFAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLFGPIV 242 Query: 211 GAILGSLLYNYVLFPPAKSLSERLAVLKGLEPDTDWEER 249 GAI+G+ Y ++ + L + V++ E T E++ Sbjct: 243 GAIVGAFAYRKLI---GRHLPCDICVVEEKETTTPSEQK 278 >5I32-A nrPDB Length = 275 Score = 189 bits (480), Expect = 1e-48, Method: Composition-based stats. Identities = 83/234 (35%), Positives = 127/234 (54%), Gaps = 11/234 (4%) Query: 6 SIAFSRAVFAEFLATLLFVFFGLGSALNWPQ-------ALPSVLQIAMAFGLGIGTLVQA 58 S+A RA AEF++TLLFVF G+GSA+ + + P ++ IA+ G + V Sbjct: 39 SLASLRAYLAEFISTLLFVFAGVGSAIAYAKLTSDAALDTPGLVAIAVCHGFALFVAVAI 98 Query: 59 LGHISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAV 118 +ISG H+NPAVT VG ++V+ FY AQLLG+ A LL +T + Sbjct: 99 GANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLKYVTGGLA---VPT 155 Query: 119 NALSNSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGT-PALSIGFSVALGHLLGIH 177 ++++ + + V +E+ +T LV ++A+ + + + GT L+IG V L Sbjct: 156 HSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGSLGTIAPLAIGLIVGANILAAGP 215 Query: 178 YTGCSMNPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNYVLFPPAKSLS 231 ++G SMNPARS PAV G F HWV+W+GPL+G L L+Y V ++ + Sbjct: 216 FSGGSMNPARSFGPAVAAGDFSGHWVYWVGPLIGGGLAGLIYGNVFMGSSEHVP 269 >2EVU-A nrPDB Length = 246 Score = 181 bits (459), Expect = 3e-46, Method: Composition-based stats. Identities = 74/243 (30%), Positives = 108/243 (44%), Gaps = 28/243 (11%) Query: 7 IAFSRAVFAEFLATLLFVFFGLGSAL---------NWPQALP----------SVLQIAMA 47 ++ ++ AEF+ T + VFFG GSA P + I +A Sbjct: 2 VSLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLA 61 Query: 48 FGLGIGTLVQALGHISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEI 107 FG I + ALG+ISG HINPAVT+ Y+ AQLLGA G+ + + Sbjct: 62 FGFAIAASIYALGNISGCHINPAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQC 121 Query: 108 T--PADIRGDLAVNALSNSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIG 165 A G L A + QA+ E+ T L++ I + R G + IG Sbjct: 122 AGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIMGIAVDER-APKGFAGIIIG 180 Query: 166 FSVALGHLLGIHYTGCSMNPARSLAPAVVTGKF--DDHW----VFWIGPLVGAILGSLLY 219 +VA + +G S+NPAR+ P + F D W ++ IGP+VGA+L +L Y Sbjct: 181 LTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTY 240 Query: 220 NYV 222 Y+ Sbjct: 241 QYL 243 Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 8/111 (7%) Query: 4 LRSIAFSRAVFAEFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLGIGTLVQALGHIS 63 I++ +A+ AE + T L + +G A++ +A I GL + ++ LG+IS Sbjct: 138 FPGISYWQAMLAEVVGTFLLMITIMGIAVD-ERAPKGFAGI--IIGLTVAGIITTLGNIS 194 Query: 64 GAHINPAVTVA-----CLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITP 109 G+ +NPA T + + YV ++GAV A +T Sbjct: 195 GSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTYQYLTS 245 >6F7H-A nrPDB Length = 301 Score = 180 bits (458), Expect = 4e-46, Method: Composition-based stats. Identities = 65/293 (22%), Positives = 116/293 (39%), Gaps = 45/293 (15%) Query: 3 ELRSIAFSRAVFAEFLATLLFVFFGLGS---ALNWPQALPSVLQIAMAFGLGIGTLVQAL 59 +RS+ +R AEFL + + G+ A+ + + + +A L + + Sbjct: 15 RIRSL-LARQCLAEFLGVFVLMLLTQGAVAQAVTSGETKGNFFTMFLAGSLAVTIAIYVG 73 Query: 60 GHISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITP----ADIRGD 115 G++SGAH+NPA ++A + + ++ Y+ QLL A + + + G+ Sbjct: 74 GNVSGAHLNPAFSLAMCIVGRLPWVKLPIYILVQLLSAFCASGATYVLYHDALQNYTGGN 133 Query: 116 LAVNA-----------LSNSTTAGQAVTVELFLTLQLVLCIFASTDERRGE-NPGTPALS 163 L V + + ++ T L++ + A D R G + Sbjct: 134 LTVTGPKETASIFATYPAPYLSLNNGFLDQVLGTGMLIVGLLAILDRRNKGVPAGLEPVV 193 Query: 164 IGFSV-ALGHLLGIHYTGCSMNPARSLAPA-----------VVTGKFDDHWVFWIGPLVG 211 +G + ALG +G + G +NPAR L P V + WV + PLVG Sbjct: 194 VGMLILALGLSMGAN-CGIPLNPARDLGPRLFTYVAGWGPEVFSAGNGWWWVPVVAPLVG 252 Query: 212 AILGSLLYNYVLFPPAKSLSERLAVLKGLEPDTDWEEREVRRRQSVELHSPQS 264 A +G+ Y ++ L +G EP D + ++ EL +P S Sbjct: 253 ATVGTATYQLLV---------ALHHPEGPEPAQDLVSAQ---HKASELETPAS 293 >3C02-A nrPDB Length = 258 Score = 180 bits (456), Expect = 8e-46, Method: Composition-based stats. Identities = 55/238 (23%), Positives = 92/238 (38%), Gaps = 19/238 (7%) Query: 7 IAFSRAVFAEFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLGIGT--LVQALGHISG 64 ++ R EFL T + +F G G+ N+ S + G G+ + +SG Sbjct: 7 KSYVREFIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSAKLSG 66 Query: 65 AHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADI-RGDLAVNALSN 123 AH+N AV++ + + Y AQLLGA G + ++ + I + A Sbjct: 67 AHLNLAVSIGLSSINKFDLKKIPVYFFAQLLGAFVGTSTVYGLYHGFISNSKIPQFAWET 126 Query: 124 STTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHL---LGIHY-- 178 S ++T F L L + EN + S +G + +GI + Sbjct: 127 SRNPSISLTGAFFNELILTGILLLVILVVVDENICGKFHILKLSSVVGLIILCIGITFGG 186 Query: 179 -TGCSMNPARSLAPAV----------VTGKFDDHWVFWIGPLVGAILGSLLYNYVLFP 225 TG ++NP+R L T WV + P VG+++ Y+ V+ P Sbjct: 187 NTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQFYDKVICP 244 >2W1P-A nrPDB Length = 279 Score = 178 bits (451), Expect = 3e-45, Method: Composition-based stats. Identities = 63/219 (28%), Positives = 103/219 (47%), Gaps = 14/219 (6%) Query: 12 AVFAEFLATLLFVF--FGLGSALNWPQALPSV-------LQIAMAFGLGIGTLVQALGHI 62 A+ EF+ T LF++ F + N P + I+ FG G+ V + Sbjct: 47 AMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRV 106 Query: 63 SGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNALS 122 SG ++NPAVT+A ++ + R Q++ +A A +TP +I NAL Sbjct: 107 SGGNLNPAVTLALVLARAIPPFRGILMAFTQIVAGMAAAGAASAMTPGEIA---FANALG 163 Query: 123 NSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGIHYTGCS 182 + + + +E F T L L + E+ IG ++ + HL+ I+YTG Sbjct: 164 GGASRTRGLFLEAFGTAILCLTVLMLAVEKHRATW-FAPFVIGIALLIAHLICIYYTGAG 222 Query: 183 MNPARSLAPAVVTGKFDD-HWVFWIGPLVGAILGSLLYN 220 +NPARS PAV F + HW++W+GP++GA L ++ Sbjct: 223 LNPARSFGPAVAARSFPNYHWIYWLGPILGAFLAYSIWQ 261 >3LLQ-A nrPDB Length = 256 Score = 175 bits (444), Expect = 2e-44, Method: Composition-based stats. Identities = 76/230 (33%), Positives = 111/230 (48%), Gaps = 14/230 (6%) Query: 4 LRSIAFSRAVFAEFLATLLFVFFGLGSAL---NWPQALPSVLQIAMAFGLGIGTLVQALG 60 +S R + AEF T VF G GSA+ +P+ +A+AFGL + T+ A+G Sbjct: 24 FQSYVMGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVG 83 Query: 61 HISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIR---GDLA 117 ISG H NPAV+V V YV AQ+ GA+ AA L+ I G A Sbjct: 84 GISGGHFNPAVSVGLTVAGRFPASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFA 143 Query: 118 VNALSNSTTAG----QAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHL 173 N + G A+ +E+ LT ++ I ST R G ++IG ++ L HL Sbjct: 144 SNGYGEHSPGGYSLVSALLIEIILTAFFLIVILGSTHGRV--PAGFAPIAIGLALTLIHL 201 Query: 174 LGIHYTGCSMNPARSLAPAVVTGKF--DDHWVFWIGPLVGAILGSLLYNY 221 + I T S+NPARS A+ G + W+FW+ P+VG G++++ Sbjct: 202 ISIPVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPIVGGAAGAVIWKL 251 Score = 29.6 bits (65), Expect = 1.7, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 32/93 (34%), Gaps = 5/93 (5%) Query: 119 NALSNSTTAGQAVTVELFLTLQLVLC-----IFASTDERRGENPGTPALSIGFSVALGHL 173 N S G+ + E F T LV +FA+ G AL+ G +V Sbjct: 21 NLYFQSYVMGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAY 80 Query: 174 LGIHYTGCSMNPARSLAPAVVTGKFDDHWVFWI 206 +G NPA S+ V V ++ Sbjct: 81 AVGGISGGHFNPAVSVGLTVAGRFPASSLVPYV 113 >3NE2-A nrPDB Length = 246 Score = 170 bits (431), Expect = 6e-43, Method: Composition-based stats. Identities = 74/243 (30%), Positives = 105/243 (43%), Gaps = 27/243 (11%) Query: 6 SIAFSRAVFAEFLATLLFVFFGLGSAL---------NWPQALP----------SVLQIAM 46 ++ ++ AE + T + VFFG G+A+ + P I M Sbjct: 2 TMTLAKRFTAEVVGTFILVFFGPGAAVITLMIANGADKPNEFNIGIGALGGLGDWFAIGM 61 Query: 47 AFGLGIGTLVQALGHISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHE 106 AF L I ++ +LG ISGAHINPAVT+A Y+ AQ +GA G+ L Sbjct: 62 AFALAIAAVIYSLGRISGAHINPAVTIALWSIGRFPGREVVPYIVAQFIGAALGSLLFLA 121 Query: 107 ITPA--DIRGDLAVNALSNSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSI 164 G L A GQA+ E T L+L I + R PG L I Sbjct: 122 CVGPAAATVGGLGATAPFPGIGYGQAILTEAIGTFLLMLVIMGVAVDER-APPGFAGLVI 180 Query: 165 GFSVALGHLLGIHYTGCSMNPARSLAPAVVTGKFD-DHW----VFWIGPLVGAILGSLLY 219 G +V + TG S+NPAR+ P + + W ++ IGP+VGA+ + LY Sbjct: 181 GLTVGGIITTIGNITGSSLNPARTFGPYLGDSLMGINLWQYFPIYVIGPIVGAVAAAWLY 240 Query: 220 NYV 222 NY+ Sbjct: 241 NYL 243 Score = 46.2 bits (108), Expect = 2e-05, Method: Composition-based stats. Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 7/109 (6%) Query: 4 LRSIAFSRAVFAEFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLGIGTLVQALGHIS 63 I + +A+ E + T L + +G A++ +A P + GL +G ++ +G+I+ Sbjct: 139 FPGIGYGQAILTEAIGTFLLMLVIMGVAVD-ERAPPGFAG--LVIGLTVGGIITTIGNIT 195 Query: 64 GAHINPAVTVACLVGCHVSVLRA----AFYVAAQLLGAVAGAALLHEIT 108 G+ +NPA T +G + + YV ++GAVA A L + + Sbjct: 196 GSSLNPARTFGPYLGDSLMGINLWQYFPIYVIGPIVGAVAAAWLYNYLA 244 >2O9F-A nrPDB Length = 234 Score = 169 bits (429), Expect = 1e-42, Method: Composition-based stats. Identities = 80/233 (34%), Positives = 113/233 (48%), Gaps = 16/233 (6%) Query: 9 FSRAVFAEFLATLLFVFFGLGSAL---NWPQALPSVLQIAMAFGLGIGTLVQALGHISGA 65 R + AE T VF G GSA+ +P+ +A+AFGL + T+ A+GHISG Sbjct: 4 MFRKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGG 63 Query: 66 HINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIR-----GDLAVNA 120 H NPAVT+ G YV AQ++G + AALL+ I A N Sbjct: 64 HFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNG 123 Query: 121 LSNSTTAG----QAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGI 176 + G A+ VEL L+ +L I +TD+ G ++IG + L HL+ I Sbjct: 124 YGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKF--APAGFAPIAIGLACTLIHLISI 181 Query: 177 HYTGCSMNPARSLAPAVVTGKF--DDHWVFWIGPLVGAILGSLLYNYVLFPPA 227 T S+NPARS A A+ G + + W FW+ P+VG I+G L+Y +L Sbjct: 182 PVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEKRD 234 >5Z7D-A nrPDB Length = 412 Score = 27.7 bits (60), Expect = 5.5, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 31/84 (36%), Gaps = 5/84 (5%) Query: 16 EFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLGIGTLVQALGHISGAHINPAVTVAC 75 EF +F +AL +++ I+ FG + +S ++NP + ++ Sbjct: 253 EFFRVKVF-----DTALKSKFIPRNIIAISDYFGCNGFLEIYRASCVSDVNVNPTMVISN 307 Query: 76 LVGCHVSVLRAAFYVAAQLLGAVA 99 + + Y+ +Q G Sbjct: 308 TLRQRANATPKISYLFSQARGTFV 331 >5YZW-A nrPDB Length = 201 Score = 27.7 bits (60), Expect = 5.5, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 31/84 (36%), Gaps = 5/84 (5%) Query: 16 EFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLGIGTLVQALGHISGAHINPAVTVAC 75 EF +F +AL +++ I+ FG + +S ++NP + ++ Sbjct: 42 EFFRVKVF-----DTALKSKFIPRNIIAISDYFGCNGFLEIYRASCVSDVNVNPTMVISN 96 Query: 76 LVGCHVSVLRAAFYVAAQLLGAVA 99 + + Y+ +Q G Sbjct: 97 TLRQRANATPKISYLFSQARGTFV 120 >5AGS-A nrPDB Length = 232 Score = 26.9 bits (58), Expect = 8.8, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Query: 17 FLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLGIGTLVQALGHIS 63 F+A + +G G+ + P A AFGL I V A G+IS Sbjct: 145 FIADYVLAGYGTGAIMAVPGHDQRDWDFARAFGLPI-VEVIAGGNIS 190 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.314 0.137 0.368 Lambda K H 0.267 0.0422 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,328,671 Number of Sequences: 36641 Number of extensions: 335714 Number of successful extensions: 1340 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 46 Number of HSP's successfully gapped in prelim test: 25 Number of HSP's that attempted gapping in prelim test: 1163 Number of HSP's gapped (non-prelim): 79 length of query: 271 length of database: 10,336,785 effective HSP length: 95 effective length of query: 176 effective length of database: 6,855,890 effective search space: 1206636640 effective search space used: 1206636640 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.0 bits) S2: 58 (26.9 bits)