BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P40348 (353 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1SXJ-D nrPDB 731 0.0 2CHV-A nrPDB 241 2e-64 1IQP-A nrPDB 238 4e-63 2CHG-A nrPDB 216 9e-57 1SXJ-C nrPDB 193 9e-50 1SXJ-B nrPDB 186 2e-47 1SXJ-E nrPDB 116 2e-26 1SXJ-A nrPDB 82 5e-16 3GLF-B nrPDB 72 3e-13 3U5Z-B nrPDB 72 4e-13 1NJG-A nrPDB 66 3e-11 3PVS-A nrPDB 47 1e-05 1HQC-A nrPDB 41 7e-04 1IN6-A nrPDB 40 0.001 6EMW-B nrPDB 36 0.022 3K1J-A nrPDB 36 0.029 4ZPX-A nrPDB 35 0.040 6EM8-A nrPDB 35 0.062 6CHS-H nrPDB 35 0.064 4D81-A nrPDB 35 0.067 5WVI-K nrPDB 34 0.078 6EF1-K nrPDB 34 0.084 5J40-A nrPDB 33 0.14 6QI8-A nrPDB 33 0.21 2XSZ-A nrPDB 33 0.22 5VHP-E nrPDB 33 0.22 6MCK-A nrPDB 33 0.22 3HU1-A nrPDB 33 0.23 5HVM-A nrPDB 33 0.24 5C18-A nrPDB 33 0.26 6MSD-E nrPDB 32 0.28 2X8A-A nrPDB 32 0.30 1R6B-X nrPDB 32 0.32 5VQ9-D nrPDB 32 0.35 5EQT-A nrPDB 32 0.35 5VC7-A nrPDB 32 0.47 5G4G-A nrPDB 32 0.50 3CF0-A nrPDB 32 0.52 3H4M-A nrPDB 32 0.59 5E7P-A nrPDB 32 0.62 4CIU-A nrPDB 31 0.69 3WHK-A nrPDB 31 0.74 4LCB-A nrPDB 31 0.78 4XGU-A nrPDB 31 0.81 6AP1-A nrPDB 31 0.87 2NMV-A nrPDB 31 0.96 5W0T-A nrPDB 31 0.97 3PFI-A nrPDB 31 0.97 3M6A-A nrPDB 30 1.4 5KWA-A nrPDB 30 1.5 5VHO-F nrPDB 30 1.7 3EC2-A nrPDB 30 1.7 4B3F-X nrPDB 30 1.9 5VFP-F nrPDB 30 1.9 4LGM-A nrPDB 30 2.0 6EPD-M nrPDB 30 2.0 2ZAO-A nrPDB 30 2.3 6FVU-L nrPDB 29 2.4 5FM7-A nrPDB 29 2.5 5XMK-A nrPDB 29 2.7 6ED3-A nrPDB 29 2.7 6EF0-L nrPDB 29 2.7 5D4W-A nrPDB 29 2.9 5WVI-L nrPDB 29 3.2 3EIH-A nrPDB 29 3.5 1XWI-A nrPDB 29 3.5 6HE9-H nrPDB 29 3.8 6BLB-A nrPDB 29 3.8 3J3U-A nrPDB 28 4.2 6E11-1 nrPDB 28 4.2 6HE4-H nrPDB 28 4.3 5L3S-B nrPDB 28 4.5 6MAT-A nrPDB 28 5.1 2XGW-A nrPDB 28 5.2 5YMX-A nrPDB 28 5.3 2XZL-A nrPDB 28 5.6 5TJR-A nrPDB 28 5.9 3PXI-A nrPDB 28 6.0 5OFO-C nrPDB 28 6.2 1QVR-A nrPDB 28 6.8 5HVO-A nrPDB 28 6.9 5UJ7-C nrPDB 28 7.4 1WB8-A nrPDB 28 7.6 3NXS-A nrPDB 28 8.0 1XI3-A nrPDB 28 8.0 2Y7H-A nrPDB 28 8.9 >1SXJ-D nrPDB Length = 353 Score = 731 bits (1888), Expect = 0.0, Method: Compositional matrix adjust. Identities = 352/353 (99%), Positives = 353/353 (100%) Query: 1 MFEGFGPNKKRKISKLAAEQSLAQQPWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPH 60 MFEGFGPNKKRKISKLAAEQSLAQQPWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPH Sbjct: 1 MFEGFGPNKKRKISKLAAEQSLAQQPWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPH 60 Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK Sbjct: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 Query: 121 PSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPL 180 PSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPL Sbjct: 121 PSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPL 180 Query: 181 ASRCSKFRFKALDASNAIDRLRFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASK 240 AS+CSKFRFKALDASNAIDRLRFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASK Sbjct: 181 ASQCSKFRFKALDASNAIDRLRFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASK 240 Query: 241 GAQYLGDGKNITSTQVEELAGVVPHDILIEIVEKVKSGDFDEIKKYVNTFMKSGWSAASV 300 GAQYLGDGKNITSTQVEELAGVVPHDILIEIVEKVKSGDFDEIKKYVNTFMKSGWSAASV Sbjct: 241 GAQYLGDGKNITSTQVEELAGVVPHDILIEIVEKVKSGDFDEIKKYVNTFMKSGWSAASV 300 Query: 301 VNQLHEYYITNDNFDTNFKNQISWLLFTTDSRLNNGTNEHIQLLNLLVKISQL 353 VNQLHEYYITNDNFDTNFKNQISWLLFTTDSRLNNGTNEHIQLLNLLVKISQL Sbjct: 301 VNQLHEYYITNDNFDTNFKNQISWLLFTTDSRLNNGTNEHIQLLNLLVKISQL 353 >2CHV-A nrPDB Length = 319 Score = 241 bits (616), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 137/328 (41%), Positives = 192/328 (58%), Gaps = 19/328 (5%) Query: 27 WVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPD 86 WVEKYRP+ LDEV QD + LK ++ N+PH+LF GPPGTGKT+T +AL ++L+G + Sbjct: 7 WVEKYRPRTLDEVVGQDEVIQRLKGYVERKNIPHLLFSGPPGTGKTATAIALARDLFGEN 66 Query: 87 LMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMT 146 + +E+NASDERGI +VR K+K FAR + P P+KII LDEAD++T Sbjct: 67 -WRDNFIEMNASDERGIDVVRHKIKEFAR---TAP-------IGGAPFKIIFLDEADALT 115 Query: 147 ADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASNAIDRLRFISE 206 ADAQ+ALRRTME YS RF L CNYV+RII+P+ SRC+ FRFK + RL I E Sbjct: 116 ADAQAALRRTMEMYSKSCRFILSCNYVSRIIEPIQSRCAVFRFKPVPKEAMKKRLLEICE 175 Query: 207 QENVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNITSTQVEELAGVVPHD 266 +E VK + LE ++ IS GD R+ I LQ A+ G+ + + + ++ + Sbjct: 176 KEGVKITEDGLEALIYISGGDFRKAINALQGAA------AIGEVVDADTIYQITATARPE 229 Query: 267 ILIEIVEKVKSGDFDEIKKYVNTFM-KSGWSAASVVNQLHEYYITNDNFDTNFKNQISWL 325 + E+++ G+F E ++ ++ M + G S +V QL I+ D+ K Q+ Sbjct: 230 EMTELIQTALKGNFMEARELLDRLMVEYGMSGEDIVAQLFREIISMPIKDS-LKVQLIDK 288 Query: 326 LFTTDSRLNNGTNEHIQLLNLLVKISQL 353 L D RL G NE IQL L +S L Sbjct: 289 LGEVDFRLTEGANERIQLDAYLAYLSTL 316 >1IQP-A nrPDB Length = 327 Score = 238 bits (606), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 137/334 (41%), Positives = 197/334 (58%), Gaps = 19/334 (5%) Query: 19 EQSLAQQPWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILAL 78 E + ++PWVEKYRP+ LD++ Q+H V LK +K+ ++PH+LF GPPG GKT+ LAL Sbjct: 7 EVKVLEKPWVEKYRPQRLDDIVGQEHIVKRLKHYVKTGSMPHLLFAGPPGVGKTTAALAL 66 Query: 79 TKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIII 138 +EL+G + + LELNASDERGI+++REKVK FAR +KP +KII Sbjct: 67 ARELFGEN-WRHNFLELNASDERGINVIREKVKEFAR---TKP-------IGGASFKIIF 115 Query: 139 LDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASNAI 198 LDEAD++T DAQ ALRRTME +S RF L CNY ++II+P+ SRC+ FRF+ L + Sbjct: 116 LDEADALTQDAQQALRRTMEMFSSNVRFILSCNYSSKIIEPIQSRCAIFRFRPLRDEDIA 175 Query: 199 DRLRFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNITSTQVEE 258 RLR+I+E E ++ + L+ IL I+ GD+RR I +LQ+A+ K IT V Sbjct: 176 KRLRYIAENEGLELTEEGLQAILYIAEGDMRRAINILQAAA------ALDKKITDENVFM 229 Query: 259 LAG-VVPHDILIEIVEKVKSGDFDEIKKYVNTFMKSGWSAASVVNQLHEYYITNDNFDTN 317 +A P DI ++ +K +K +K G S V+ Q+H+ + N + Sbjct: 230 VASRARPEDIREMMLLALKGNFLKAREKLREILLKQGLSGEDVLVQMHK-EVFNLPIEEP 288 Query: 318 FKNQISWLLFTTDSRLNNGTNEHIQLLNLLVKIS 351 K ++ + + RL G NE IQL LL + + Sbjct: 289 KKVLLADKIGEYNFRLVEGANEIIQLEALLAQFT 322 >2CHG-A nrPDB Length = 226 Score = 216 bits (551), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 108/213 (50%), Positives = 141/213 (66%), Gaps = 11/213 (5%) Query: 27 WVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPD 86 WVEKYRP+ LDEV QD + LK ++ N+PH+LF GPPGTGKT+T +AL ++L+G + Sbjct: 7 WVEKYRPRTLDEVVGQDEVIQRLKGYVERKNIPHLLFSGPPGTGKTATAIALARDLFGEN 66 Query: 87 LMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMT 146 + +E+NASDERGI +VR K+K FAR + P+KII LDEAD++T Sbjct: 67 -WRDNFIEMNASDERGIDVVRHKIKEFARTAPIGGA----------PFKIIFLDEADALT 115 Query: 147 ADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASNAIDRLRFISE 206 ADAQ+ALRRTME YS RF L CNYV+RII+P+ SRC+ FRFK + RL I E Sbjct: 116 ADAQAALRRTMEMYSKSCRFILSCNYVSRIIEPIQSRCAVFRFKPVPKEAMKKRLLEICE 175 Query: 207 QENVKCDDGVLERILDISAGDLRRGITLLQSAS 239 +E VK + LE ++ IS GD R+ I LQ A+ Sbjct: 176 KEGVKITEDGLEALIYISGGDFRKAINALQGAA 208 >1SXJ-C nrPDB Length = 340 Score = 193 bits (491), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 114/324 (35%), Positives = 180/324 (55%), Gaps = 25/324 (7%) Query: 26 PWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGP 85 PWVEKYRP+ LDEV Q+ +T ++K + LPH+LFYGPPGTGKTSTI+AL +E+YG Sbjct: 14 PWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGK 73 Query: 86 DLMKSRILELNASDERGISIVREKVKNFA--RLTVSKPSKHDLENYPCPPYKIIILDEAD 143 + + +LELNASD+RGI +VR ++K+FA R SK +K+IILDEAD Sbjct: 74 N-YSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSK------------GFKLIILDEAD 120 Query: 144 SMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASNAIDRLRF 203 +MT AQ+ALRR +E Y+ TRFC++ NY ++ L S+C++FRF+ L R+ Sbjct: 121 AMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSQCTRFRFQPLPQEAIERRIAN 180 Query: 204 ISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNITSTQVEELAGVV 263 + E +K + ++++S GD+RR + +LQS K D I+ + E G Sbjct: 181 VLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSC-KATLDNPDEDEISDDVIYECCGAP 239 Query: 264 PHDILIEIVEKVKSGDFDEIKKYVNTFMKSGWSA-----ASVVNQLHEYYITNDNFDTNF 318 L +++ + D+ +N + A +V L +Y + N+ + Sbjct: 240 RPSDLKAVLKSILEDDWGTAHYTLNKVRSAKGLALIDLIEGIVKILEDYELQNEETRVHL 299 Query: 319 KNQISWLLFTTDSRLNNGTNEHIQ 342 +++ + ++ ++ G N+ IQ Sbjct: 300 LTKLADIEYS----ISKGGNDQIQ 319 >1SXJ-B nrPDB Length = 323 Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 117/332 (35%), Positives = 180/332 (54%), Gaps = 22/332 (6%) Query: 24 QQPWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELY 83 Q PWVEKYRP+ L ++ + L++ K N+PHM+ G PG GKT+++ L EL Sbjct: 8 QLPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELL 67 Query: 84 GPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEAD 143 G +LELNASD+RGI +VR ++K+FA+ + + P +KI+ILDEAD Sbjct: 68 GRSYADG-VLELNASDDRGIDVVRNQIKHFAQKKL---------HLPPGKHKIVILDEAD 117 Query: 144 SMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASNAIDRLRF 203 SMTA AQ ALRRTME YS TRF CN +II+PL S+C+ R+ L + + RL Sbjct: 118 SMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSQCAILRYSKLSDEDVLKRLLQ 177 Query: 204 ISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNITSTQVEELAGVV 263 I + E+VK + LE I+ + GD+R+ I LQS G L + N+ V+ Sbjct: 178 IIKLEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAG-HGLVNADNVFKI-VDS----- 230 Query: 264 PHDILIEIVEKVKSGDFDEIKKYVNTFMKSGWSAASVVNQLHEYYITND--NFDTNFKNQ 321 PH ++++ + + S D I+ K G+S+ +V + +T + + + + Sbjct: 231 PHPLIVKKM-LLASNLEDSIQILRTDLWKKGYSSIDIVTT--SFRVTKNLAQVKESVRLE 287 Query: 322 ISWLLFTTDSRLNNGTNEHIQLLNLLVKISQL 353 + + T R+ G ++QL ++L KI +L Sbjct: 288 MIKEIGLTHMRILEGVGTYLQLASMLAKIHKL 319 >1SXJ-E nrPDB Length = 354 Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 93/349 (26%), Positives = 164/349 (46%), Gaps = 28/349 (8%) Query: 27 WVEKYRPKNLDEVTAQDHAVTVLKK-TLKSANLPHMLFYGPPGTGKTSTILALTKELYGP 85 WV+KYRPK+L+ ++ + LK + + +LPH+L YGP GTGK + +AL + ++GP Sbjct: 4 WVDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGP 63 Query: 86 DLMKSRI------------LELNA-SDERGISIVREKVKNFARLTVSKPSK--------- 123 + + +I LELN S + I + N R+ + + K Sbjct: 64 GVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVD 123 Query: 124 -HDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLAS 182 D ++ YK +I++EA+S+T DAQ+ALRRTME YS R ++C+ ++ II P+ S Sbjct: 124 FQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKS 183 Query: 183 RCSKFRFKALDASNAIDRLRFISEQENVKCD-DGVLERILDISAGDLRRGITLLQSASKG 241 +C R A S L + E ++ + +L+RI S G+LR + +L+S + Sbjct: 184 QCLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESMALN 243 Query: 242 AQYLGDGKNITSTQVEELAGVVPHDILIEIVEKVKSGDFDEIKKYVNTFMKSGWSAASVV 301 + +S ++ +V H + +IV++ E + + + A ++ Sbjct: 244 NEL---ALKSSSPIIKPDWIIVIHKLTRKIVKERSVNSLIECRAVLYDLLAHCIPANIIL 300 Query: 302 NQLHEYYITNDNFDTNFKNQISWLLFTTDSRLNNGTNEHIQLLNLLVKI 350 +L + + +T K+ I D RL+ G L + K+ Sbjct: 301 KELTFSLLDVETLNTTNKSSIIEYSSVFDERLSLGNKAIFHLEGFIAKV 349 >1SXJ-A nrPDB Length = 516 Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 70/230 (30%), Positives = 105/230 (45%), Gaps = 27/230 (11%) Query: 27 WVEKYRPKNLDEVTAQDHAVTVLKKTL------KSANLPHM-----------LFYGPPGT 69 W KY P NL +V +V LK L K + H + YGPPG Sbjct: 29 WTVKYAPTNLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGI 88 Query: 70 GKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKN-FARLTVSKPSKHDLEN 128 GKT+ + +EL G D ILE NASD R +++ VKN ++V KH+ E Sbjct: 89 GKTTAAHLVAQEL-GYD-----ILEQNASDVRSKTLLNAGVKNALDNMSVVGYFKHNEEA 142 Query: 129 YPC-PPYKIIILDEADSMTADAQSALRRTME-TYSGVTRFCLICNYVTRI-IDPLASRCS 185 + +II+DE D M+ + + + + T LICN + P C Sbjct: 143 QNLNGKHFVIIMDEVDGMSGGDRGGVGQLAQFCRKTSTPLILICNERNLPKMRPFDRVCL 202 Query: 186 KFRFKALDASNAIDRLRFISEQENVKCDDGVLERILDISAGDLRRGITLL 235 +F+ DA++ RL I+ +E K D V++R++ + GD+R+ I LL Sbjct: 203 DIQFRRPDANSIKSRLMTIAIREKFKLDPNVIDRLIQTTRGDIRQVINLL 252 >3GLF-B nrPDB Length = 395 Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 69/289 (23%), Positives = 125/289 (43%), Gaps = 16/289 (5%) Query: 22 LAQQPWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHM-LFYGPPGTGKTSTILALTK 80 ++ Q K+RP+ +V Q+H +T L L + H LF G G GKTS L K Sbjct: 23 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 82 Query: 81 EL---YGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPP---- 133 L G + + E+G + ++ +R V ++ L+N P Sbjct: 83 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVED-TRDLLDNVQYAPARGR 141 Query: 134 YKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKALD 193 +K+ ++DE ++ + +AL +T+E +F L ++ + SRC +F KALD Sbjct: 142 FKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALD 201 Query: 194 ASNAIDRLRFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNITS 253 +L I +E++ + L+ + + G LR ++L A GDG+ +++ Sbjct: 202 VEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIAS----GDGQ-VST 256 Query: 254 TQVEELAGVVPHDILIEIVEKVKSGDFDEIKKYVNTFMKSG--WSAASV 300 V + G + D + +VE + + + + +N G W A V Sbjct: 257 QAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLV 305 >3U5Z-B nrPDB Length = 324 Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 65/224 (29%), Positives = 98/224 (43%), Gaps = 29/224 (12%) Query: 29 EKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGP-PGTGKTSTILALTKELYGPDL 87 +KYRP +DE K +PH++ + P PGTGKT+ AL ++ Sbjct: 18 QKYRPSTIDECILPAFDKETFKSITSKGKIPHIILHSPSPGTGKTTVAKALCHDV----- 72 Query: 88 MKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEAD-SMT 146 + ++ +N SD + I VR + NFA + K+I++DE D S Sbjct: 73 -NADMMFVNGSDCK-IDFVRGPLTNFASAASFDGRQ-----------KVIVIDEFDRSGL 119 Query: 147 ADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASNAID------- 199 A++Q LR ME YS + N + II PL SRC F + I+ Sbjct: 120 AESQRHLRSFMEAYSSNCSIIITANNIDGIIKPLQSRCRVITFGQPTDEDKIEMMKQMIR 179 Query: 200 RLRFISEQENVKCDD-GVLERILDISAGDLRRGITLLQS-ASKG 241 RL I + E + D V+ ++ + D R+ I L S +SKG Sbjct: 180 RLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSYSSKG 223 >1NJG-A nrPDB Length = 250 Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 63/243 (25%), Positives = 108/243 (44%), Gaps = 15/243 (6%) Query: 21 SLAQQPWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHM-LFYGPPGTGKTSTILALT 79 S++ Q K+RP+ +V Q+H +T L L + H LF G G GKTS L Sbjct: 7 SMSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLA 66 Query: 80 KEL---YGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPP--- 133 K L G + + E+G + ++ +R V + ++ L+N P Sbjct: 67 KGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKV-EDTRDLLDNVQYAPARG 125 Query: 134 -YKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKAL 192 +K+ ++DE ++ + +AL +T+E +F L ++ + SRC +F KAL Sbjct: 126 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL 185 Query: 193 DASNAIDRLRFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNIT 252 D +L I +E++ + L+ + + G LR ++L A GDG+ Sbjct: 186 DVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIAS----GDGQ--V 239 Query: 253 STQ 255 STQ Sbjct: 240 STQ 242 >3PVS-A nrPDB Length = 447 Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 64/253 (25%), Positives = 101/253 (39%), Gaps = 40/253 (15%) Query: 25 QPWVEKYRPKNLDEVTAQDHAVTV---LKKTLKSANLPHMLFYGPPGTGKTSTILALTKE 81 QP + RP+NL + Q H + L + +++ +L M+ +GPPGTGKT+ LA Sbjct: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTT--LAEVIA 71 Query: 82 LYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDE 141 Y NA ER IS V VK + + + +N I+ +DE Sbjct: 72 RYA-----------NADVER-ISAVTSGVKE-----IREAIERARQNRNAGRRTILFVDE 114 Query: 142 ADSMTADAQSALRRTME----TYSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASN- 196 Q A +E T+ G T N + L SR + K+L + Sbjct: 115 VHRFNKSQQDAFLPHIEDGTITFIGAT----TENPSFELNSALLSRARVYLLKSLSTEDI 170 Query: 197 -------AIDRLRFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGK 249 D+ R Q+ V D+ I ++ GD RR + L+ + A+ GK Sbjct: 171 EQVLTQAMEDKTRGYGGQDIVLPDE-TRRAIAELVNGDARRALNTLEMMADMAEVDDSGK 229 Query: 250 NITSTQ-VEELAG 261 + + + E+AG Sbjct: 230 RVLKPELLTEIAG 242 >1HQC-A nrPDB Length = 324 Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 5/56 (8%) Query: 32 RPKNLDEVTAQDHAVTVLKKTLKSAN-----LPHMLFYGPPGTGKTSTILALTKEL 82 RPK LDE Q+ L+ L++A L H+L +GPPG GKT+ + EL Sbjct: 7 RPKTLDEYIGQERLKQKLRVYLEAAKARKEPLEHLLLFGPPGLGKTTLAHVIAHEL 62 >1IN6-A nrPDB Length = 334 Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 12/74 (16%) Query: 28 VEKYRPKNLDEVTAQDHAVTVLKKTLKSAN-----LPHMLFYGPPGTGKTSTILALTKEL 82 V+ RPK+LDE Q++ L L++A L H+L GPPG G+T+ + EL Sbjct: 16 VQFLRPKSLDEFIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGRTTLAHIIASEL 75 Query: 83 Y-------GPDLMK 89 GP L+K Sbjct: 76 QTNIHVTSGPVLVK 89 >6EMW-B nrPDB Length = 225 Score = 36.2 bits (82), Expect = 0.022, Method: Compositional matrix adjust. Identities = 37/156 (23%), Positives = 63/156 (40%), Gaps = 19/156 (12%) Query: 12 KISKLAAEQSLAQQPWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLP--HMLFYGPPGT 69 KI++ +E+ L+ + + + D V + AV + LK P +F GP G Sbjct: 3 KINETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGV 62 Query: 70 GKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPS--KHD-- 125 GKT AL + ++G D R+ ++ +S RL + P HD Sbjct: 63 GKTELARALAESMFGDDDAMIRVDMSEFMEKHAVS----------RLVGAPPGYVGHDDG 112 Query: 126 ---LENYPCPPYKIIILDEADSMTADAQSALRRTME 158 E PY +I+ DE + D + L + ++ Sbjct: 113 GQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLD 148 >3K1J-A nrPDB Length = 604 Score = 35.8 bits (81), Expect = 0.029, Method: Compositional matrix adjust. Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 2/39 (5%) Query: 34 KNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKT 72 K +D+V Q+HAV V+K H+L G PGTGK+ Sbjct: 38 KLIDQVIGQEHAVEVIKTAANQKR--HVLLIGEPGTGKS 74 >4ZPX-A nrPDB Length = 413 Score = 35.4 bits (80), Expect = 0.040, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 3/67 (4%) Query: 34 KNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRIL 93 K +D+V Q+HAV V+K H+L G PGTGK+ A+ EL + ++ ++ Sbjct: 38 KLIDQVIGQEHAVEVIKTAANQKR--HVLLIGEPGTGKSMLGQAMA-ELLPTETLEDILV 94 Query: 94 ELNASDE 100 N DE Sbjct: 95 FPNPEDE 101 >6EM8-A nrPDB Length = 818 Score = 34.7 bits (78), Expect = 0.062, Method: Compositional matrix adjust. Identities = 38/146 (26%), Positives = 59/146 (40%), Gaps = 19/146 (13%) Query: 12 KISKLAAEQSLAQQPWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLP--HMLFYGPPGT 69 KI++ +E+ L+ + + + D V + AV + LK P +F GP G Sbjct: 490 KINETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGV 549 Query: 70 GKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPS--KHD-- 125 GKT AL + ++G D R+ +S EK +RL + P HD Sbjct: 550 GKTELARALAESMFGDDDAMIRV---------DMSEFMEK-HAVSRLVGAPPGYVGHDDG 599 Query: 126 ---LENYPCPPYKIIILDEADSMTAD 148 E PY +I+ DE + D Sbjct: 600 GQLTEKVRRKPYSVILFDEIEKAHPD 625 >6CHS-H nrPDB Length = 819 Score = 34.7 bits (78), Expect = 0.064, Method: Compositional matrix adjust. Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 9/53 (16%) Query: 43 DHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKE-------LYGPDLM 88 DH LK L + +LFYGPPGTGKT A+ E + GP+L+ Sbjct: 515 DHPEKFLKFGLSPSR--GVLFYGPPGTGKTMLAKAVANECAANFISVKGPELL 565 Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust. Identities = 59/238 (24%), Positives = 97/238 (40%), Gaps = 60/238 (25%) Query: 61 MLFYGPPGTGKTSTILALTKE-------LYGPDLMKSRILELNASDERGISIVREKVKNF 113 +L YGPPGTGKT A+ E + GP++M S++ + S+ R K F Sbjct: 257 VLLYGPPGTGKTLMARAVANETGAFFFLINGPEIM-SKMAGESESNLR---------KAF 306 Query: 114 ARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYV 173 + P+ II +DE DS+ A +R E +G ++ + Sbjct: 307 EEAEKNSPA-------------IIFIDEIDSI------APKR--EKTNGEVERRVVSQLL 345 Query: 174 TRIIDPLASRCSKFRFKALDASNAIDRL--RFISEQENVKCDDGVLERILDISAGDLRRG 231 T ++D + +R + A + N+ID RF G +R +DI D Sbjct: 346 T-LMDGMKARSNVVVMAATNRPNSIDPALRRF-----------GRFDREVDIGIPDPTGR 393 Query: 232 ITLLQSASKGAQYLGDGKNITSTQVE-------ELAGVVPHDILIEIVEKVKSGDFDE 282 + +LQ +K + L D ++ E +LA + + +I EK+ D DE Sbjct: 394 LEILQIHTKNMK-LADDVDLEQIAAETHGYVGSDLAALCSEAAMQQIREKMDLIDLDE 450 >4D81-A nrPDB Length = 283 Score = 34.7 bits (78), Expect = 0.067, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 11/91 (12%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 +L YGPPG GKT A+ EL S + ++A+ + E KN A++ + Sbjct: 48 ILLYGPPGCGKTMIAAAVANEL------DSEFIHVDAASIMS-KWLGEAEKNVAKIFKTA 100 Query: 121 PSKHDLENYPCPPYKIIILDEADSMTADAQS 151 EN P II +DE D++ A S Sbjct: 101 RELSKKENKPA----IIFIDELDALLASYTS 127 >5WVI-K nrPDB Length = 428 Score = 34.3 bits (77), Expect = 0.078, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 31/107 (28%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASD------ERGISIVREKVKNFA 114 +L YGPPGTGKT + A+ K+ + +N S+ G +VR+ V A Sbjct: 209 VLLYGPPGTGKTMLVKAVANS------TKAAFIRVNGSEFVHKYLGEGPRMVRD-VFRLA 261 Query: 115 RLTVSKPSKHDLENYPCPPYKIIILDEADSMTA---DAQSALRRTME 158 R EN P II +DE DS+ DAQ+ R ++ Sbjct: 262 R-----------ENAPS----IIFIDEVDSIATKRFDAQTGSDREVQ 293 >6EF1-K nrPDB Length = 276 Score = 34.3 bits (77), Expect = 0.084, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 31/107 (28%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASD------ERGISIVREKVKNFA 114 +L YGPPGTGKT + A+ K+ + +N S+ G +VR+ V A Sbjct: 57 VLLYGPPGTGKTMLVKAVANS------TKAAFIRVNGSEFVHKYLGEGPRMVRD-VFRLA 109 Query: 115 RLTVSKPSKHDLENYPCPPYKIIILDEADSMTA---DAQSALRRTME 158 R EN P II +DE DS+ DAQ+ R ++ Sbjct: 110 R-----------ENAPS----IIFIDEVDSIATKRFDAQTGSDREVQ 141 >5J40-A nrPDB Length = 372 Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust. Identities = 37/120 (30%), Positives = 50/120 (41%), Gaps = 15/120 (12%) Query: 19 EQSLAQQPWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLP---HMLFYGPPGTGKTSTI 75 EQ +A W+ P+ +D V + VL N+P + LF GP +GKT+ Sbjct: 130 EQYMAGVAWIHCLLPQ-MDTVIYEFLKCIVL-------NIPKKRYWLFKGPIDSGKTTLA 181 Query: 76 LALTKELYGPDLMKSRILE-LNASDERGIS---IVREKVKNFARLTVSKPSKHDLENYPC 131 AL G L + LE LN GI +V E VK + PS H + N C Sbjct: 182 AALLDLCGGKSLNVNMPLERLNFELGVGIDQFMVVFEDVKGTGAESRDLPSGHGISNLDC 241 >6QI8-A nrPDB Length = 456 Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust. Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 2/40 (5%) Query: 45 AVTVLKKTLKSANLP--HMLFYGPPGTGKTSTILALTKEL 82 A V+ + +KS + +L GPPGTGKT+ LA+ +EL Sbjct: 48 ACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQEL 87 >2XSZ-A nrPDB Length = 367 Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust. Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 2/40 (5%) Query: 45 AVTVLKKTLKSANLP--HMLFYGPPGTGKTSTILALTKEL 82 A V+ + +KS + +L GPPGTGKT+ LA+ +EL Sbjct: 62 ACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQEL 101 >5VHP-E nrPDB Length = 262 Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 16/84 (19%) Query: 62 LFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKP 121 L YGPPGTGKT A+ +L L++ +S SIV + + ARL + + Sbjct: 44 LLYGPPGTGKTLLARAVASQL------DCNFLKVVSS-----SIVDKYIGESARL-IREM 91 Query: 122 SKHDLENYPCPPYKIIILDEADSM 145 + ++ PC II +DE D++ Sbjct: 92 FNYARDHQPC----IIFMDEIDAI 111 >6MCK-A nrPDB Length = 606 Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust. Identities = 48/196 (24%), Positives = 77/196 (39%), Gaps = 52/196 (26%) Query: 61 MLFYGPPGTGKTSTILALTKE-------LYGPDLMKSRILELNASDERGISIVREKVKNF 113 +L YGPPGTGKT A+ E + GP++M S++ + S+ R K F Sbjct: 33 ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM-SKLAGESESNLR---------KAF 82 Query: 114 ARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYV 173 + P+ II +DE D++ + +T+ V R I + + Sbjct: 83 EEAEKNAPA-------------IIFIDELDAIAPKRE-------KTHGEVER--RIVSQL 120 Query: 174 TRIIDPLASRCSKFRFKALDASNAIDRL--RFISEQENVKCDDGVLERILDISAGDLRRG 231 ++D L R A + N+ID RF G +R +DI D Sbjct: 121 LTLMDGLKQRAHVIVMAATNRPNSIDPALRRF-----------GRFDREVDIGIPDATGR 169 Query: 232 ITLLQSASKGAQYLGD 247 + +LQ +K + D Sbjct: 170 LEILQIHTKNMKLADD 185 Score = 31.6 bits (70), Expect = 0.56, Method: Compositional matrix adjust. Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 7/35 (20%) Query: 61 MLFYGPPGTGKTSTILALTKE-------LYGPDLM 88 +LFYGPPG GKT A+ E + GP+L+ Sbjct: 306 VLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 340 >3HU1-A nrPDB Length = 489 Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust. Identities = 48/196 (24%), Positives = 77/196 (39%), Gaps = 52/196 (26%) Query: 61 MLFYGPPGTGKTSTILALTKE-------LYGPDLMKSRILELNASDERGISIVREKVKNF 113 +L YGPPGTGKT A+ E + GP++M S++ + S+ R K F Sbjct: 241 ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM-SKLAGESESNLR---------KAF 290 Query: 114 ARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYV 173 + P+ II +DE D++ + +T+ V R I + + Sbjct: 291 EEAEKNAPA-------------IIFIDELDAIAPKRE-------KTHGEVER--RIVSQL 328 Query: 174 TRIIDPLASRCSKFRFKALDASNAIDRL--RFISEQENVKCDDGVLERILDISAGDLRRG 231 ++D L R A + N+ID RF G +R +DI D Sbjct: 329 LTLMDGLKQRAHVIVMAATNRPNSIDPALRRF-----------GRFDREVDIGIPDATGR 377 Query: 232 ITLLQSASKGAQYLGD 247 + +LQ +K + D Sbjct: 378 LEILQIHTKNMKLADD 393 >5HVM-A nrPDB Length = 515 Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust. Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 2/78 (2%) Query: 223 ISAGDLRRGITLLQSASKGAQYLGDGKNITSTQVEELAGVVPHDILIEIVEKVKSGDFDE 282 I++ R G+ +L + AQ L I EELAG + + + ++ ++ +F + Sbjct: 396 IASQQKRHGVLVLSEFAGAAQSLNGSIIINPWNTEELAGA--YQEAVTMSDEQRALNFSK 453 Query: 283 IKKYVNTFMKSGWSAASV 300 + KYVN + + W + V Sbjct: 454 LDKYVNKYTSAFWGQSFV 471 >5C18-A nrPDB Length = 785 Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust. Identities = 48/196 (24%), Positives = 77/196 (39%), Gaps = 52/196 (26%) Query: 61 MLFYGPPGTGKTSTILALTKE-------LYGPDLMKSRILELNASDERGISIVREKVKNF 113 +L YGPPGTGKT A+ E + GP++M S++ + S+ R K F Sbjct: 240 ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM-SKLAGESESNLR---------KAF 289 Query: 114 ARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYV 173 + P+ II +DE D++ + +T+ V R I + + Sbjct: 290 EEAEKNAPA-------------IIFIDELDAIAPKRE-------KTHGEVER--RIVSQL 327 Query: 174 TRIIDPLASRCSKFRFKALDASNAIDRL--RFISEQENVKCDDGVLERILDISAGDLRRG 231 ++D L R A + N+ID RF G +R +DI D Sbjct: 328 LTLMDGLKQRAHVIVMAATNRPNSIDPALRRF-----------GRFDREVDIGIPDATGR 376 Query: 232 ITLLQSASKGAQYLGD 247 + +LQ +K + D Sbjct: 377 LEILQIHTKNMKLADD 392 Score = 31.6 bits (70), Expect = 0.50, Method: Compositional matrix adjust. Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 7/35 (20%) Query: 61 MLFYGPPGTGKTSTILALTKE-------LYGPDLM 88 +LFYGPPG GKT A+ E + GP+L+ Sbjct: 513 VLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 547 >6MSD-E nrPDB Length = 403 Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 16/84 (19%) Query: 62 LFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKP 121 L YGPPGTGKT A+ +L L++ +S SIV + + ARL + + Sbjct: 185 LLYGPPGTGKTLLARAVASQL------DCNFLKVVSS-----SIVDKYIGESARL-IREM 232 Query: 122 SKHDLENYPCPPYKIIILDEADSM 145 + ++ PC II +DE D++ Sbjct: 233 FNYARDHQPC----IIFMDEIDAI 252 >2X8A-A nrPDB Length = 274 Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust. Identities = 38/146 (26%), Positives = 57/146 (39%), Gaps = 39/146 (26%) Query: 61 MLFYGPPGTGKTSTILALTKE-------LYGPDLMKSRILELNASDERGISIVREKVKNF 113 +L GPPG GKT A+ E + GP+L+ + E ER + V ++ KN Sbjct: 47 VLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGE----SERAVRQVFQRAKNS 102 Query: 114 ARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYV 173 A PC +I DE D++ R ET + V + N + Sbjct: 103 A---------------PC----VIFFDEVDALCPR-----RSDRETGASVR----VVNQL 134 Query: 174 TRIIDPLASRCSKFRFKALDASNAID 199 +D L +R F A + + ID Sbjct: 135 LTEMDGLEARQQVFIMAATNRPDIID 160 >1R6B-X nrPDB Length = 758 Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 10/60 (16%) Query: 39 VTAQDHAVTVLKKTLK--SANLPH-------MLFYGPPGTGKTSTILALTKELYGPDLMK 89 V QD A+ L + +K A L H LF GP G GKT + L+K L G +L++ Sbjct: 460 VFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL-GIELLR 518 >5VQ9-D nrPDB Length = 432 Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust. Identities = 13/22 (59%), Positives = 17/22 (77%) Query: 61 MLFYGPPGTGKTSTILALTKEL 82 +L +GPPGTGKTS AL ++L Sbjct: 175 VLLHGPPGTGKTSLCKALAQKL 196 >5EQT-A nrPDB Length = 257 Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 46/109 (42%), Gaps = 36/109 (33%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDER--GISIVREKVKNFARLTV 118 +L YGPPG GKT AL E+NA+ R G +VR+ + ARL Sbjct: 42 VLLYGPPGCGKTLMAKALAH-------------EVNATFIRVVGSELVRKYIGEGARLV- 87 Query: 119 SKPSKHDL-----ENYPCPPYKIIILDEADSMTADAQSALRRTMETYSG 162 H+L E P II +DE D++ A +R ET G Sbjct: 88 -----HELFELAKEKAPT----IIFIDEIDAIGA------KRMDETTGG 121 >5VC7-A nrPDB Length = 564 Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust. Identities = 33/110 (30%), Positives = 45/110 (40%), Gaps = 36/110 (32%) Query: 62 LFYGPPGTGKTSTILALTKE-------LYGPDLMKSRILELNASDERGISIVREKVKNFA 114 L YGPPG GKT A+ E + GP+++ + E E+ I + +K K A Sbjct: 324 LLYGPPGVGKTLLAKAVATESNANFISIKGPEVLSKWVGE----SEKAIREIFKKAKQVA 379 Query: 115 RLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVT 164 P I+ LDE DS+ A RR + SGVT Sbjct: 380 ---------------PA----IVFLDEIDSI------APRRGTTSDSGVT 404 Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust. Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 7/35 (20%) Query: 61 MLFYGPPGTGKTSTILALTKE-------LYGPDLM 88 ++ YGPPGTGKT A+ E + GP++M Sbjct: 46 VILYGPPGTGKTLIARAVANESGANFLSINGPEIM 80 >5G4G-A nrPDB Length = 721 Score = 31.6 bits (70), Expect = 0.50, Method: Compositional matrix adjust. Identities = 33/110 (30%), Positives = 46/110 (41%), Gaps = 36/110 (32%) Query: 62 LFYGPPGTGKTSTILALTKE-------LYGPDLMKSRILELNASDERGISIVREKVKNFA 114 L YGPPG GKT A+ E + GP+++ + E E+ I + +K K A Sbjct: 500 LLYGPPGVGKTLLAKAVATESNANFISIKGPEVLSKWVGE----SEKAIREIFKKAKQVA 555 Query: 115 RLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVT 164 P+ I+ LDE DS+ A RR + SGVT Sbjct: 556 ------PA-------------IVFLDEIDSI------APRRGTTSDSGVT 580 Score = 30.8 bits (68), Expect = 0.92, Method: Compositional matrix adjust. Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 7/35 (20%) Query: 61 MLFYGPPGTGKTSTILALTKE-------LYGPDLM 88 ++ YGPPGTGKT A+ E + GP++M Sbjct: 222 VILYGPPGTGKTLIARAVANESGANFLSINGPEIM 256 >3CF0-A nrPDB Length = 301 Score = 31.6 bits (70), Expect = 0.52, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 9/47 (19%) Query: 51 KTLKSANLPH--MLFYGPPGTGKTSTILALTKE-------LYGPDLM 88 K LK P +LFYGPPG GKT A+ E + GP+L+ Sbjct: 40 KFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 86 >3H4M-A nrPDB Length = 285 Score = 31.6 bits (70), Expect = 0.59, Method: Compositional matrix adjust. Identities = 33/101 (32%), Positives = 44/101 (43%), Gaps = 32/101 (31%) Query: 61 MLFYGPPGTGKTSTILALTKE-------LYGPDLMKSRILELNASDERGISIVREKVKNF 113 +L YGPPGTGKT A+ E + G +L+K I E G S+ VK+ Sbjct: 54 ILLYGPPGTGKTLLAKAVATETNATFIRVVGSELVKKFIGE-------GASL----VKDI 102 Query: 114 ARLTVSK-PSKHDLENYPCPPYKIIILDEADSMTADAQSAL 153 +L K PS II +DE D++ A AL Sbjct: 103 FKLAKEKAPS-------------IIFIDEIDAIAAKRTDAL 130 >5E7P-A nrPDB Length = 745 Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust. Identities = 36/111 (32%), Positives = 46/111 (41%), Gaps = 36/111 (32%) Query: 61 MLFYGPPGTGKTSTILALTKE-------LYGPDLMKSRILELNASDERGISIVREKVKNF 113 +L YGPPG GKT + AL + G +LM + S E+ VRE F Sbjct: 522 VLLYGPPGCGKTFVVRALASSGRLSVHAVKGSELMDKWV----GSSEKA---VREL---F 571 Query: 114 ARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVT 164 AR S PS ++ LDE D++ A RR SGVT Sbjct: 572 ARARDSAPS-------------LVFLDEIDAL------APRRGQNFDSGVT 603 >4CIU-A nrPDB Length = 727 Score = 31.2 bits (69), Expect = 0.69, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 64/170 (37%), Gaps = 22/170 (12%) Query: 39 VTAQDHAVTVLKKTLKSANLP--HMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELN 96 V A +A+ + L N P LF GP G GKT AL ++ D RI Sbjct: 435 VDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRI---- 490 Query: 97 ASDERGISIVREKVKNFARLTVSKP-------SKHDLENYPCPPYKIIILDEADSMTADA 149 +S EK + +RL + P + E PY +I+LD + D Sbjct: 491 -----DMSEFMEK-HSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDAVEKAHPDV 544 Query: 150 QSALRRTMET---YSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASN 196 + L + ++ G R N V + L S + RF LD ++ Sbjct: 545 FNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAH 594 >3WHK-A nrPDB Length = 270 Score = 31.2 bits (69), Expect = 0.74, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 46/109 (42%), Gaps = 36/109 (33%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDER--GISIVREKVKNFARLTV 118 +L YGPPG GKT A+ E+NA+ R G +VR+ + ARL Sbjct: 54 VLLYGPPGCGKTLMAKAIAH-------------EVNATFIRVVGSELVRKYIGEGARLV- 99 Query: 119 SKPSKHDL-----ENYPCPPYKIIILDEADSMTADAQSALRRTMETYSG 162 H+L E P II +DE D++ A +R ET G Sbjct: 100 -----HELFELAKEKAPT----IIFIDEIDAIGA------KRLDETTGG 133 >4LCB-A nrPDB Length = 367 Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 15/87 (17%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARL--TV 118 +L YGPPG GKT A+ E+ S + ++A+ + E KN A++ T Sbjct: 133 ILLYGPPGNGKTMLAAAVANEI------DSYFIHVDAASIMS-KWLGEAEKNVAKIFNTA 185 Query: 119 SKPSKHDLENYPCPPYKIIILDEADSM 145 + SK D N P II +DE D++ Sbjct: 186 REYSKKD--NKPA----IIFVDEIDAL 206 >4XGU-A nrPDB Length = 424 Score = 30.8 bits (68), Expect = 0.81, Method: Compositional matrix adjust. Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 3/40 (7%) Query: 61 MLFYGPPGTGKTSTILALTKEL---YGPDLMKSRILELNA 97 +L GPPGTGKTS L + L KS +LE+N+ Sbjct: 175 ILLTGPPGTGKTSLCKGLAQHLSIRMNDKYSKSVMLEINS 214 >6AP1-A nrPDB Length = 519 Score = 30.8 bits (68), Expect = 0.87, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 25/105 (23%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASD--ERGISIVREKVKN-FARLT 117 +L YGPPGTGK+ A+ E S +++SD + + + VK FA Sbjct: 70 ILLYGPPGTGKSYLAKAVATE------ANSTFFSVSSSDLVSKWMGESEKLVKQLFAMAR 123 Query: 118 VSKPSKHDLENYPCPPYKIIILDEADSMT---ADAQSALRRTMET 159 +KPS II +DE D++T + +S R ++T Sbjct: 124 ENKPS-------------IIFIDEVDALTGTRGEGESEASRRIKT 155 >2NMV-A nrPDB Length = 661 Score = 30.8 bits (68), Expect = 0.96, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 6/62 (9%) Query: 27 WVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPD 86 V KY+P+ Q A+ L K ++ H G GTGKT T+ L KE+ P Sbjct: 7 LVSKYQPQG-----DQPKAIEKLVKGIQEGK-KHQTLLGATGTGKTFTVSNLIKEVNKPT 60 Query: 87 LM 88 L+ Sbjct: 61 LV 62 >5W0T-A nrPDB Length = 304 Score = 30.8 bits (68), Expect = 0.97, Method: Compositional matrix adjust. Identities = 13/21 (61%), Positives = 14/21 (66%) Query: 61 MLFYGPPGTGKTSTILALTKE 81 +L YGPPG GKT AL KE Sbjct: 80 VLLYGPPGCGKTMLAKALAKE 100 >3PFI-A nrPDB Length = 338 Score = 30.8 bits (68), Expect = 0.97, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 5/47 (10%) Query: 32 RPKNLDEVTAQDHAVTVLKKTLKSAN-----LPHMLFYGPPGTGKTS 73 RP N D Q+ L + +A L H+LF GP G GKT+ Sbjct: 24 RPSNFDGYIGQESIKKNLNVFIAAAKKRNECLDHILFSGPAGLGKTT 70 >3M6A-A nrPDB Length = 543 Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust. Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 3/38 (7%) Query: 45 AVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKEL 82 AV L K+LK P + GPPG GKTS ++ K L Sbjct: 98 AVQKLTKSLKG---PILCLAGPPGVGKTSLAKSIAKSL 132 >5KWA-A nrPDB Length = 497 Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust. Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 11/106 (10%) Query: 61 MLFYGPPGTGKTSTILALTK-------ELYGPDLMKSRILELNASDERGISIVREKVKNF 113 +L YGPPG GKT A+ E+ G D +++ LN ++ + + Sbjct: 184 VLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVGETERH 243 Query: 114 ARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMET 159 RL + + E P I+ DE DS+ + + +ET Sbjct: 244 IRLIFQRAREKASEGTPV----IVFFDEMDSIFRTRGTGVSSDVET 285 >5VHO-F nrPDB Length = 267 Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 40/92 (43%), Gaps = 30/92 (32%) Query: 61 MLFYGPPGTGKT---STILALTK----ELYGPDLMKSRILELNASDERGISIVREKVKNF 113 +L YGPPGTGKT A TK +L GP L++ I + G +VR+ F Sbjct: 58 VLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD-------GAKLVRDA---F 107 Query: 114 ARLTVSKPSKHDLENYPCPPYKIIILDEADSM 145 A PS II +DE D++ Sbjct: 108 ALAKEKAPS-------------IIFIDELDAI 126 >3EC2-A nrPDB Length = 180 Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust. Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 10/67 (14%) Query: 23 AQQPW---VEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPH---MLFYGPPGTGKTSTIL 76 A++ W ++ Y PKN+ +Q+ A+ ++ + + N + F G PG GKT + Sbjct: 1 AKRYWNANLDTYHPKNV----SQNRALLTIRVFVHNFNPEEGKGLTFVGSPGVGKTHLAV 56 Query: 77 ALTKELY 83 A K +Y Sbjct: 57 ATLKAIY 63 >4B3F-X nrPDB Length = 646 Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust. Identities = 9/17 (52%), Positives = 15/17 (88%) Query: 62 LFYGPPGTGKTSTILAL 78 + +GPPGTGKT+T++ + Sbjct: 209 IIHGPPGTGKTTTVVEI 225 >5VFP-F nrPDB Length = 396 Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 37/111 (33%) Query: 61 MLFYGPPGTGKT---STILALTK----ELYGPDLMKSRILELNASDERGISIVREKVKNF 113 +L YGPPGTGKT A TK +L GP L++ I + G +VR+ F Sbjct: 180 VLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD-------GAKLVRDA---F 229 Query: 114 ARLTVSKPSKHDLENYPCPPYKIIILDEADSMTA---DAQSA----LRRTM 157 A PS II +DE D++ D++ A ++RTM Sbjct: 230 ALAKEKAPS-------------IIFIDELDAIGTKRFDSEKAGDREVQRTM 267 >4LGM-A nrPDB Length = 295 Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust. Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 11/85 (12%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 +L YGPPG GKT A+ E+ S ++L+A+ + E KN A + Sbjct: 60 ILLYGPPGCGKTMIAAAVANEI------DSIFMQLDAASVMS-KWLGEAEKNVANVFKMA 112 Query: 121 PSKHDLENYPCPPYKIIILDEADSM 145 + +N P II +D+ D++ Sbjct: 113 REESKKQNKPA----IIFIDQLDAL 133 >6EPD-M nrPDB Length = 442 Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 37/111 (33%) Query: 61 MLFYGPPGTGKT---STILALTK----ELYGPDLMKSRILELNASDERGISIVREKVKNF 113 +L YGPPGTGKT A TK +L GP L++ I + G +VR+ F Sbjct: 226 VLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD-------GAKLVRDA---F 275 Query: 114 ARLTVSKPSKHDLENYPCPPYKIIILDEADSMTA---DAQSA----LRRTM 157 A PS II +DE D++ D++ A ++RTM Sbjct: 276 ALAKEKAPS-------------IIFIDELDAIGTKRFDSEKAGDREVQRTM 313 >2ZAO-A nrPDB Length = 444 Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 19/87 (21%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASD--ERGISIVREKVKNFARLTV 118 +L +GPPGTGK+ A+ E S +++SD + + + VKN +L Sbjct: 170 ILLFGPPGTGKSYLAKAVATEAN-----NSTFFSISSSDLVSKWLGESEKLVKNLFQLA- 223 Query: 119 SKPSKHDLENYPCPPYKIIILDEADSM 145 EN P II +DE DS+ Sbjct: 224 -------RENKPS----IIFIDEIDSL 239 >6FVU-L nrPDB Length = 388 Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 16/85 (18%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 +L YGPPGTGKT A+ + G + + S AS IV + + AR+ + + Sbjct: 170 VLLYGPPGTGKTLLAKAVAATI-GANFIFS-----PAS-----GIVDKYIGESARI-IRE 217 Query: 121 PSKHDLENYPCPPYKIIILDEADSM 145 + E+ PC II +DE D++ Sbjct: 218 MFAYAKEHEPC----IIFMDEVDAI 238 >5FM7-A nrPDB Length = 464 Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust. Identities = 12/22 (54%), Positives = 17/22 (77%) Query: 61 MLFYGPPGTGKTSTILALTKEL 82 +L G PGTGKT+ LA+++EL Sbjct: 69 VLLAGGPGTGKTALALAISQEL 90 >5XMK-A nrPDB Length = 437 Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 25/105 (23%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASD--ERGISIVREKVKN-FARLT 117 +L YGPPGTGK+ A+ E S +++SD + + + VK FA Sbjct: 169 ILLYGPPGTGKSYLAKAVATE------ANSTFFSVSSSDLVSKWMGESEKLVKQLFAMAR 222 Query: 118 VSKPSKHDLENYPCPPYKIIILDEADSMT---ADAQSALRRTMET 159 +KPS II +D+ D++T + +S R ++T Sbjct: 223 ENKPS-------------IIFIDQVDALTGTRGEGESEASRRIKT 254 >6ED3-A nrPDB Length = 848 Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust. Identities = 15/61 (24%), Positives = 29/61 (47%) Query: 30 KYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMK 89 + R LD V +D+ + + + L + + G PG GKT+ + L + + D+ + Sbjct: 171 RAREGKLDPVIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPE 230 Query: 90 S 90 S Sbjct: 231 S 231 >6EF0-L nrPDB Length = 273 Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 16/85 (18%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 +L YGPPGTGKT A+ + G + + S AS IV + + AR+ + + Sbjct: 55 VLLYGPPGTGKTLLAKAVAATI-GANFIFS-----PAS-----GIVDKYIGESARI-IRE 102 Query: 121 PSKHDLENYPCPPYKIIILDEADSM 145 + E+ PC II +DE D++ Sbjct: 103 MFAYAKEHEPC----IIFMDEVDAI 123 >5D4W-A nrPDB Length = 926 Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust. Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Query: 39 VTAQDHAVTVLKKTLKSANLP-HMLFYGPPGTGKTSTILALTKELY 83 V + +A+ + + L + N P LF GP GTGKT AL + L+ Sbjct: 607 VQSVSNAIRLQRSGLSNPNQPPSFLFCGPSGTGKTLLTKALAEFLF 652 >5WVI-L nrPDB Length = 437 Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 16/85 (18%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 +L YGPPGTGKT A+ + G + + S AS IV + + AR+ + + Sbjct: 218 VLLYGPPGTGKTLLAKAVAATI-GANFIFS-----PAS-----GIVDKYIGESARI-IRE 265 Query: 121 PSKHDLENYPCPPYKIIILDEADSM 145 + E+ PC II +DE D++ Sbjct: 266 MFAYAKEHEPC----IIFMDEVDAI 286 >3EIH-A nrPDB Length = 340 Score = 28.9 bits (63), Expect = 3.5, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 25/105 (23%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASD--ERGISIVREKVKN-FARLT 117 +L YGPPGTGK+ A+ E S +++SD + + + VK FA Sbjct: 72 ILLYGPPGTGKSYLAKAVATE------ANSTFFSVSSSDLVSKWMGESEKLVKQLFAMAR 125 Query: 118 VSKPSKHDLENYPCPPYKIIILDEADSMT---ADAQSALRRTMET 159 +KPS II +D+ D++T + +S R ++T Sbjct: 126 ENKPS-------------IIFIDQVDALTGTRGEGESEASRRIKT 157 >1XWI-A nrPDB Length = 322 Score = 28.9 bits (63), Expect = 3.5, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 19/87 (21%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASD--ERGISIVREKVKNFARLTV 118 +L +GPPGTGK+ A+ E S +++SD + + + VKN +L Sbjct: 48 ILLFGPPGTGKSYLAKAVATEAN-----NSTFFSISSSDLVSKWLGESEKLVKNLFQLA- 101 Query: 119 SKPSKHDLENYPCPPYKIIILDEADSM 145 EN P II +DE DS+ Sbjct: 102 -------RENKPS----IIFIDEIDSL 117 >6HE9-H nrPDB Length = 390 Score = 28.9 bits (63), Expect = 3.8, Method: Compositional matrix adjust. Identities = 10/12 (83%), Positives = 11/12 (91%) Query: 61 MLFYGPPGTGKT 72 +L YGPPGTGKT Sbjct: 170 VLLYGPPGTGKT 181 >6BLB-A nrPDB Length = 355 Score = 28.9 bits (63), Expect = 3.8, Method: Compositional matrix adjust. Identities = 11/25 (44%), Positives = 16/25 (64%) Query: 58 LPHMLFYGPPGTGKTSTILALTKEL 82 L H L +GPPG GKT+ + +E+ Sbjct: 59 LDHTLIFGPPGLGKTTLANIIAQEM 83 >3J3U-A nrPDB Length = 810 Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust. Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 17/104 (16%) Query: 62 LFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKP 121 +F GP G GKT AL + ++G + RI +S EK + +RL S P Sbjct: 542 IFLGPTGVGKTELARALAESIFGDEESMIRI---------DMSEYMEK-HSTSRLVGSPP 591 Query: 122 S--KHD-----LENYPCPPYKIIILDEADSMTADAQSALRRTME 158 +D E PY +++LD + D + L + +E Sbjct: 592 GYVGYDEGGQLTEKVRRKPYSVVLLDAIEKAHPDVFNILLQVLE 635 >6E11-1 nrPDB Length = 906 Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust. Identities = 17/61 (27%), Positives = 28/61 (45%) Query: 29 EKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLM 88 EK R L + +D + + ++L N + G PGTGKT+ + L + D+ Sbjct: 199 EKVRNGKLQGIYGRDEEIRAIIESLLRYNKNSPVLVGNPGTGKTTIVEGLVYRIEKGDVP 258 Query: 89 K 89 K Sbjct: 259 K 259 Score = 28.1 bits (61), Expect = 5.6, Method: Compositional matrix adjust. Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 17/104 (16%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 LF GP G GKT L EL+ K ++ +N S+ + + +++T S Sbjct: 634 FLFLGPTGVGKTELAKTLAIELFNS---KDNLIRVNMSE-------FTEAHSVSKITGSP 683 Query: 121 P-------SKHDLENYPCPPYKIIILDEADSMTADAQSALRRTM 157 P S E P+ +++ DE + AD L + + Sbjct: 684 PGYVGFSDSGQLTEAVREKPHSVVLFDELEKAHADVFKVLLQIL 727 >6HE4-H nrPDB Length = 267 Score = 28.5 bits (62), Expect = 4.3, Method: Compositional matrix adjust. Identities = 10/12 (83%), Positives = 11/12 (91%) Query: 61 MLFYGPPGTGKT 72 +L YGPPGTGKT Sbjct: 56 VLLYGPPGTGKT 67 >5L3S-B nrPDB Length = 296 Score = 28.5 bits (62), Expect = 4.5, Method: Compositional matrix adjust. Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Query: 34 KNLDEVTAQDHAVTVLKKTLKSANLPH-MLFYGPPGTGKTSTI 75 K++ E+ ++ +++K S P ++F+G G GKT+TI Sbjct: 76 KSITEILTKNQKTDLIEKIRSSGKKPFVIIFFGVNGVGKTTTI 118 >6MAT-A nrPDB Length = 813 Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust. Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 11/61 (18%) Query: 61 MLFYGPPGTGKTSTILALTKE-------LYGPDLMKSRILELNASDERGISIVREKVKNF 113 +L +GPPG GKT A+ E + GP+L+ + E ER + + + K+ Sbjct: 538 ILLWGPPGCGKTLVAKAVANESKANFISIKGPELLNKYVGE----SERAVRQLFSRAKSS 593 Query: 114 A 114 A Sbjct: 594 A 594 >2XGW-A nrPDB Length = 199 Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust. Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 6/68 (8%) Query: 241 GAQYLG-DGKNITSTQVEELAGVVPHDILIEIVEKVKSGDFDEIKKYVNTFMKSGWSAAS 299 G Q +G D ++T+T VE + V H+I K ++ ++ K +N + AAS Sbjct: 6 GGQQMGRDPNSMTNTLVENIYASVTHNI-----SKKEASKNEKTKAVLNQAVADLSVAAS 60 Query: 300 VVNQLHEY 307 +V+Q+H Y Sbjct: 61 IVHQVHWY 68 >5YMX-A nrPDB Length = 203 Score = 28.1 bits (61), Expect = 5.3, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 10/67 (14%) Query: 18 AEQS--LAQQPWVEKYRPKNLDEVTAQDHAVTV--LKKTLKSANLPHMLFYGPPGTGKTS 73 AEQ L + P+V +Y ++L +AVTV ++K L N+P P G G Sbjct: 125 AEQGYDLNKIPYVIQYNKRDLP------NAVTVEEMRKALNHRNIPEYQAVAPTGVGVFD 178 Query: 74 TILALTK 80 T+ A+ K Sbjct: 179 TLKAVAK 185 >2XZL-A nrPDB Length = 802 Score = 28.1 bits (61), Expect = 5.6, Method: Compositional matrix adjust. Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 2/35 (5%) Query: 59 PHMLFYGPPGTGKTSTILALTKELYGPDLMKSRIL 93 P L GPPGTGKT T + L + K RIL Sbjct: 376 PLSLIQGPPGTGKTVTSATIVYHL--SKIHKDRIL 408 >5TJR-A nrPDB Length = 531 Score = 28.1 bits (61), Expect = 5.9, Method: Compositional matrix adjust. Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 9/59 (15%) Query: 187 FRFKALDASNAIDRLRFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYL 245 FRFK L +N ++ ISE+ +D +AG+L+RGI ++ A+ + L Sbjct: 102 FRFKQLLEANEERIVKLISEEHGKTIED---------AAGELKRGIENVEYATAAPEIL 151 >3PXI-A nrPDB Length = 758 Score = 28.1 bits (61), Expect = 6.0, Method: Compositional matrix adjust. Identities = 12/31 (38%), Positives = 17/31 (54%) Query: 62 LFYGPPGTGKTSTILALTKELYGPDLMKSRI 92 +F GP G GKT AL + ++G + RI Sbjct: 525 IFLGPTGVGKTELARALAESIFGDEESMIRI 555 >5OFO-C nrPDB Length = 871 Score = 28.1 bits (61), Expect = 6.2, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 2/56 (3%) Query: 39 VTAQDHAVTVLKKTLKSANLP--HMLFYGPPGTGKTSTILALTKELYGPDLMKSRI 92 V A +A+ + L N P LF GP G GKT AL ++ D RI Sbjct: 581 VDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRI 636 >1QVR-A nrPDB Length = 854 Score = 28.1 bits (61), Expect = 6.8, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 9/54 (16%) Query: 39 VTAQDHAVTVL-------KKTLKSANLP--HMLFYGPPGTGKTSTILALTKELY 83 V QD A+ + + LK N P LF GP G GKT L L+ Sbjct: 560 VVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLF 613 >5HVO-A nrPDB Length = 479 Score = 27.7 bits (60), Expect = 6.9, Method: Compositional matrix adjust. Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 2/76 (2%) Query: 229 RRGITLLQSASKGAQYLGDGKNITSTQVEELAGVVPHDILIEIVEKVKSGDFDEIKKYVN 288 R+G+ +L + AQ L + EELA H+ + + ++ ++ F+++ KY++ Sbjct: 402 RKGVLILSEFAGAAQSLNGSLVVNPWNTEELARAY-HEA-VSMSDEQRARKFEKLYKYIS 459 Query: 289 TFMKSGWSAASVVNQL 304 + + W + V L Sbjct: 460 KYTSAFWGKSFVAELL 475 >5UJ7-C nrPDB Length = 436 Score = 27.7 bits (60), Expect = 7.4, Method: Compositional matrix adjust. Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 1/82 (1%) Query: 16 LAAEQSLAQQPWVEKYRPKNLDEVTAQ-DHAVTVLKKTLKSANLPHMLFYGPPGTGKTST 74 L+ Q + ++ + + NL V Q H +LK+T +L GP G+GKT Sbjct: 17 LSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGESNSVLIIGPRGSGKTML 76 Query: 75 ILALTKELYGPDLMKSRILELN 96 I KEL + + +L+++ Sbjct: 77 INHALKELMEIEEVSENVLQVH 98 >1WB8-A nrPDB Length = 210 Score = 27.7 bits (60), Expect = 7.6, Method: Compositional matrix adjust. Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 24/129 (18%) Query: 210 VKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNITSTQVEELA-----GVVP 264 V + +LER+ + GDL+ G +Q +G + +G + + E +A G P Sbjct: 42 VNGANSLLERLEKVVKGDLQTGQYDIQGIIRGLTFNINGHKLHALYWENMAPSGKGGGKP 101 Query: 265 HDILIEIVEKVKSGDFDEIKKY----VNTFMKSGWSAASVVNQLHEYYITNDN------F 314 L +++ K + G FD K+ N+ +GW+ YY T F Sbjct: 102 GGALADLINK-QYGSFDRFKQVFTETANSLPGTGWAVL--------YYDTESGNLQIMTF 152 Query: 315 DTNFKNQIS 323 + +F+N I+ Sbjct: 153 ENHFQNHIA 161 >3NXS-A nrPDB Length = 329 Score = 27.7 bits (60), Expect = 8.0, Method: Compositional matrix adjust. Identities = 39/149 (26%), Positives = 60/149 (40%), Gaps = 14/149 (9%) Query: 6 GPNKKRKISKLAAEQSLAQQPWVEKYRPKNLDEVTAQDHAVTVLKKTL----KSANLPHM 61 GP + ++ QS+ R L E T DH + L ++ + H+ Sbjct: 1 GPGSMKAVNVHELAQSIRDGDRSALARAITLVESTRADHREQAQQLLLDLMPEAGSAMHV 60 Query: 62 LFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDER-GISIVREKVKNFARLTVS- 119 G PG GK++TI AL L + +L ++ S R G SI+ +K + ARL V Sbjct: 61 GITGVPGVGKSTTIEALGMHLIEAG-HRVAVLAVDPSSTRTGGSILGDKTR-MARLAVHP 118 Query: 120 ------KPSKHDLENYPCPPYKIIILDEA 142 P+ L + I+L EA Sbjct: 119 DAYIRPSPTSGTLGGVAKATRETIVLLEA 147 >1XI3-A nrPDB Length = 215 Score = 27.7 bits (60), Expect = 8.0, Method: Compositional matrix adjust. Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 1/42 (2%) Query: 235 LQSASKGAQYLGDGKNITSTQVEELAGVVPHDILIEIVEKVK 276 L++ KGA YLG G ++ T+ +E A V+ + L +IVE VK Sbjct: 122 LEAEKKGADYLGAG-SVFPTKTKEDARVIGLEGLRKIVESVK 162 >2Y7H-A nrPDB Length = 464 Score = 27.7 bits (60), Expect = 8.9, Method: Compositional matrix adjust. Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 5/68 (7%) Query: 104 SIVREKVKNF---ARLTVSKPSKHDLENYPCPPY--KIIILDEADSMTADAQSALRRTME 158 S+ R K+ + A + KP+ DL N P PP + II ++ D++ A S R + Sbjct: 129 SLYRNKISSLSAGANINNIKPASFDLINIPIPPLAEQKIIAEKLDTLLAQVDSTKARFEQ 188 Query: 159 TYSGVTRF 166 + RF Sbjct: 189 IPQILKRF 196 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1SXJ-D nrPDB 487 e-138 2CHV-A nrPDB 366 e-101 1IQP-A nrPDB 350 5e-97 1SXJ-B nrPDB 324 3e-89 1SXJ-C nrPDB 319 2e-87 1SXJ-E nrPDB 310 6e-85 2CHG-A nrPDB 290 6e-79 3GLF-B nrPDB 262 1e-70 1NJG-A nrPDB 235 2e-62 1SXJ-A nrPDB 202 2e-52 3U5Z-B nrPDB 199 1e-51 3PVS-A nrPDB 183 1e-46 1HQC-A nrPDB 87 1e-17 1IN6-A nrPDB 83 2e-16 Sequences not found previously or not previously below threshold: 6BLB-A nrPDB 62 3e-10 3PFI-A nrPDB 61 7e-10 4D81-A nrPDB 60 2e-09 5EQT-A nrPDB 58 9e-09 5VHP-E nrPDB 57 2e-08 4LCB-A nrPDB 56 4e-08 6EF2-J nrPDB 55 5e-08 6MSD-E nrPDB 55 6e-08 4LGM-A nrPDB 54 7e-08 5VHP-C nrPDB 54 1e-07 5M32-h nrPDB 54 1e-07 3WHK-A nrPDB 54 1e-07 2CE7-A nrPDB 54 1e-07 3JCO-J nrPDB 53 2e-07 5GJQ-J nrPDB 53 2e-07 6EF1-K nrPDB 53 2e-07 5WVI-K nrPDB 52 5e-07 2XSZ-D nrPDB 52 5e-07 1XXI-E nrPDB 51 6e-07 2QBY-A nrPDB 51 1e-06 6B5D-A nrPDB 50 2e-06 6EF0-L nrPDB 50 2e-06 2XSZ-A nrPDB 49 2e-06 3H4M-A nrPDB 49 3e-06 5V8F-9 nrPDB 49 3e-06 6AP1-A nrPDB 49 3e-06 6EMW-B nrPDB 49 4e-06 5UJM-A nrPDB 48 5e-06 5VQ9-D nrPDB 48 5e-06 1XWI-A nrPDB 48 5e-06 5WC0-A nrPDB 48 7e-06 6FVU-L nrPDB 48 8e-06 5WVI-L nrPDB 48 9e-06 5VC7-A nrPDB 48 9e-06 6NYV-B nrPDB 48 1e-05 3EIH-A nrPDB 47 1e-05 5UBV-A nrPDB 47 1e-05 5C18-A nrPDB 47 1e-05 4CIU-A nrPDB 47 1e-05 5G4G-A nrPDB 47 2e-05 6EM8-A nrPDB 47 2e-05 6B5C-A nrPDB 47 2e-05 6ED3-A nrPDB 47 2e-05 3D8B-A nrPDB 47 2e-05 6MCK-A nrPDB 46 2e-05 5VHF-B nrPDB 46 2e-05 5VHN-D nrPDB 46 2e-05 6MSK-B nrPDB 46 2e-05 6HE4-H nrPDB 46 2e-05 5Z6Q-A nrPDB 46 2e-05 4YPL-A nrPDB 46 2e-05 6QI9-D nrPDB 46 2e-05 6HE9-H nrPDB 46 3e-05 5VHO-B nrPDB 46 3e-05 5VFP-B nrPDB 46 3e-05 5ZQM-A nrPDB 46 3e-05 5XMK-A nrPDB 46 3e-05 6EF0-H nrPDB 46 3e-05 3PXI-A nrPDB 46 3e-05 3PXG-A nrPDB 46 4e-05 3SC3-A nrPDB 46 4e-05 5KWA-A nrPDB 45 4e-05 2ZAO-A nrPDB 45 5e-05 6CHS-H nrPDB 45 5e-05 6EF3-H nrPDB 45 5e-05 5T0C-AD nrPDB 45 5e-05 5W0T-A nrPDB 44 7e-05 5VHO-A nrPDB 44 7e-05 4ZPX-A nrPDB 44 8e-05 5VFU-A nrPDB 44 8e-05 3J3U-A nrPDB 44 1e-04 3CF0-A nrPDB 44 1e-04 3HU1-A nrPDB 43 2e-04 6EMW-E nrPDB 43 2e-04 4YPN-A nrPDB 43 2e-04 6EPC-H nrPDB 43 2e-04 3K1J-A nrPDB 43 2e-04 2Z4R-A nrPDB 43 2e-04 6MDP-A nrPDB 43 2e-04 2QBY-B nrPDB 43 2e-04 3M6A-A nrPDB 43 3e-04 1LV7-A nrPDB 42 4e-04 5D4W-A nrPDB 42 4e-04 6E11-1 nrPDB 42 4e-04 6GEJ-U nrPDB 42 4e-04 6GEJ-T nrPDB 42 4e-04 4LJ8-A nrPDB 42 4e-04 2X8A-A nrPDB 41 7e-04 6MAT-A nrPDB 41 8e-04 1R6B-X nrPDB 41 0.001 1IY1-A nrPDB 41 0.001 6QI8-A nrPDB 41 0.001 2R65-A nrPDB 40 0.002 5FM7-A nrPDB 40 0.002 2DHR-A nrPDB 39 0.002 1FNN-A nrPDB 39 0.002 1QVR-A nrPDB 39 0.002 6AZ0-A nrPDB 39 0.002 4WW4-B nrPDB 39 0.003 5OFO-C nrPDB 39 0.003 6EF0-M nrPDB 39 0.003 5VHO-F nrPDB 39 0.003 3SYK-A nrPDB 39 0.004 5BQ5-A nrPDB 39 0.004 4XGU-A nrPDB 39 0.004 5VFP-F nrPDB 38 0.005 1JBK-A nrPDB 38 0.006 6EPD-M nrPDB 38 0.006 6QEL-G nrPDB 38 0.006 5E7P-A nrPDB 38 0.006 2R44-A nrPDB 38 0.007 6D00-1 nrPDB 38 0.007 5A5B-M nrPDB 37 0.008 2V1U-A nrPDB 37 0.009 4XGC-D nrPDB 37 0.012 4I5O-A nrPDB 37 0.013 3UPU-A nrPDB 37 0.015 4XRP-A nrPDB 37 0.016 4Z8X-A nrPDB 36 0.022 3JCP-I nrPDB 36 0.022 3EXA-A nrPDB 36 0.029 6FVU-I nrPDB 36 0.029 3GP8-A nrPDB 36 0.031 6EF1-I nrPDB 36 0.038 4L16-A nrPDB 35 0.039 5VY8-A nrPDB 35 0.045 4M4W-J nrPDB 35 0.049 2NZJ-A nrPDB 35 0.058 5WWP-B nrPDB 34 0.067 2QZ4-A nrPDB 34 0.067 2P65-A nrPDB 34 0.080 5UJ7-C nrPDB 34 0.085 5UJ7-A nrPDB 34 0.093 4XGC-A nrPDB 34 0.094 6J5T-G nrPDB 34 0.10 2I3B-A nrPDB 34 0.11 2YVU-A nrPDB 34 0.12 1G8P-A nrPDB 33 0.15 1UM8-A nrPDB 33 0.16 5V8F-A nrPDB 33 0.21 6AMN-A nrPDB 33 0.22 5J40-A nrPDB 33 0.23 1Y63-A nrPDB 33 0.24 5JZV-A nrPDB 33 0.24 3IIK-A nrPDB 32 0.27 1V43-A nrPDB 32 0.27 4YMS-J nrPDB 32 0.29 4HSE-A nrPDB 32 0.33 3JC7-2 nrPDB 32 0.33 5X06-E nrPDB 32 0.39 3J15-B nrPDB 32 0.45 1J8M-F nrPDB 32 0.53 4YER-A nrPDB 31 0.61 2WJV-A nrPDB 31 0.61 6MHU-A nrPDB 31 0.65 1P4S-A nrPDB 31 0.65 5M7N-A nrPDB 31 0.73 4OI0-A nrPDB 31 0.76 1SGW-A nrPDB 31 0.80 1YE8-A nrPDB 31 0.83 6EJ5-A nrPDB 31 0.85 4U00-A nrPDB 31 0.94 3NXS-A nrPDB 31 0.95 3TK1-A nrPDB 31 0.98 2FZ4-A nrPDB 31 0.99 1G29-1 nrPDB 31 1.0 4B3F-X nrPDB 31 1.1 3CM0-A nrPDB 31 1.1 1VPL-A nrPDB 31 1.1 1OFI-A nrPDB 30 1.3 4A2W-A nrPDB 30 1.4 4CVN-A nrPDB 30 1.5 3FFY-A nrPDB 30 1.7 5DXT-A nrPDB 30 1.7 2FWR-A nrPDB 30 1.7 4A2Q-A nrPDB 30 1.8 4A36-A nrPDB 30 2.0 4U4P-B nrPDB 29 2.2 1D2N-A nrPDB 29 2.5 3EC2-A nrPDB 29 2.5 2IUU-A nrPDB 29 2.7 2IUT-A nrPDB 29 2.8 4EUN-A nrPDB 29 2.9 5FV0-A nrPDB 29 2.9 3MD0-A nrPDB 29 2.9 2XZL-A nrPDB 29 2.9 2AKY-A nrPDB 29 3.1 3SR0-A nrPDB 29 3.1 5D0U-A nrPDB 29 3.1 3OZX-A nrPDB 29 3.3 2YYZ-A nrPDB 29 3.4 2BBW-A nrPDB 29 3.5 4Y0A-A nrPDB 29 4.1 2BDT-A nrPDB 29 4.2 5L3S-B nrPDB 28 4.8 1U0J-A nrPDB 28 5.2 3BIL-A nrPDB 28 6.5 2D62-A nrPDB 28 6.7 3IBY-A nrPDB 28 7.2 5A9K-A nrPDB 28 7.5 2GXA-A nrPDB 28 7.5 5NKM-B nrPDB 27 8.1 6HS3-A nrPDB 27 8.2 1G6H-A nrPDB 27 8.2 2GA8-A nrPDB 27 8.3 5C3C-A nrPDB 27 9.1 >1SXJ-D nrPDB Length = 353 Score = 487 bits (1252), Expect = e-138, Method: Composition-based stats. Identities = 352/353 (99%), Positives = 353/353 (100%) Query: 1 MFEGFGPNKKRKISKLAAEQSLAQQPWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPH 60 MFEGFGPNKKRKISKLAAEQSLAQQPWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPH Sbjct: 1 MFEGFGPNKKRKISKLAAEQSLAQQPWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPH 60 Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK Sbjct: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 Query: 121 PSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPL 180 PSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPL Sbjct: 121 PSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPL 180 Query: 181 ASRCSKFRFKALDASNAIDRLRFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASK 240 AS+CSKFRFKALDASNAIDRLRFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASK Sbjct: 181 ASQCSKFRFKALDASNAIDRLRFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASK 240 Query: 241 GAQYLGDGKNITSTQVEELAGVVPHDILIEIVEKVKSGDFDEIKKYVNTFMKSGWSAASV 300 GAQYLGDGKNITSTQVEELAGVVPHDILIEIVEKVKSGDFDEIKKYVNTFMKSGWSAASV Sbjct: 241 GAQYLGDGKNITSTQVEELAGVVPHDILIEIVEKVKSGDFDEIKKYVNTFMKSGWSAASV 300 Query: 301 VNQLHEYYITNDNFDTNFKNQISWLLFTTDSRLNNGTNEHIQLLNLLVKISQL 353 VNQLHEYYITNDNFDTNFKNQISWLLFTTDSRLNNGTNEHIQLLNLLVKISQL Sbjct: 301 VNQLHEYYITNDNFDTNFKNQISWLLFTTDSRLNNGTNEHIQLLNLLVKISQL 353 >2CHV-A nrPDB Length = 319 Score = 366 bits (938), Expect = e-101, Method: Composition-based stats. Identities = 136/331 (41%), Positives = 191/331 (57%), Gaps = 19/331 (5%) Query: 24 QQPWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELY 83 + WVEKYRP+ LDEV QD + LK ++ N+PH+LF GPPGTGKT+T +AL ++L+ Sbjct: 4 FEIWVEKYRPRTLDEVVGQDEVIQRLKGYVERKNIPHLLFSGPPGTGKTATAIALARDLF 63 Query: 84 GPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEAD 143 G + + +E+NASDERGI +VR K+K FAR P+KII LDEAD Sbjct: 64 GEN-WRDNFIEMNASDERGIDVVRHKIKEFARTAPIGG----------APFKIIFLDEAD 112 Query: 144 SMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASNAIDRLRF 203 ++TADAQ+ALRRTME YS RF L CNYV+RII+P+ SRC+ FRFK + RL Sbjct: 113 ALTADAQAALRRTMEMYSKSCRFILSCNYVSRIIEPIQSRCAVFRFKPVPKEAMKKRLLE 172 Query: 204 ISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNITSTQVEELAGVV 263 I E+E VK + LE ++ IS GD R+ I LQ A+ G+ + + + ++ Sbjct: 173 ICEKEGVKITEDGLEALIYISGGDFRKAINALQGAAA------IGEVVDADTIYQITATA 226 Query: 264 PHDILIEIVEKVKSGDFDEIKKYVNTFM-KSGWSAASVVNQLHEYYITNDNFDTNFKNQI 322 + + E+++ G+F E ++ ++ M + G S +V QL I+ D + K Q+ Sbjct: 227 RPEEMTELIQTALKGNFMEARELLDRLMVEYGMSGEDIVAQLFREIISMPIKD-SLKVQL 285 Query: 323 SWLLFTTDSRLNNGTNEHIQLLNLLVKISQL 353 L D RL G NE IQL L +S L Sbjct: 286 IDKLGEVDFRLTEGANERIQLDAYLAYLSTL 316 >1IQP-A nrPDB Length = 327 Score = 350 bits (898), Expect = 5e-97, Method: Composition-based stats. Identities = 136/340 (40%), Positives = 197/340 (57%), Gaps = 19/340 (5%) Query: 13 ISKLAAEQSLAQQPWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKT 72 +S+ E + ++PWVEKYRP+ LD++ Q+H V LK +K+ ++PH+LF GPPG GKT Sbjct: 1 MSEEIREVKVLEKPWVEKYRPQRLDDIVGQEHIVKRLKHYVKTGSMPHLLFAGPPGVGKT 60 Query: 73 STILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCP 132 + LAL +EL+G + + LELNASDERGI+++REKVK FAR Sbjct: 61 TAALALARELFGEN-WRHNFLELNASDERGINVIREKVKEFARTKPIGG----------A 109 Query: 133 PYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKAL 192 +KII LDEAD++T DAQ ALRRTME +S RF L CNY ++II+P+ SRC+ FRF+ L Sbjct: 110 SFKIIFLDEADALTQDAQQALRRTMEMFSSNVRFILSCNYSSKIIEPIQSRCAIFRFRPL 169 Query: 193 DASNAIDRLRFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNIT 252 + RLR+I+E E ++ + L+ IL I+ GD+RR I +LQ+A+ K IT Sbjct: 170 RDEDIAKRLRYIAENEGLELTEEGLQAILYIAEGDMRRAINILQAAAA------LDKKIT 223 Query: 253 STQVEELAG-VVPHDILIEIVEKVKSGDFDEIKKYVNTFMKSGWSAASVVNQLHEYYITN 311 V +A P DI ++ +K +K +K G S V+ Q+H+ + N Sbjct: 224 DENVFMVASRARPEDIREMMLLALKGNFLKAREKLREILLKQGLSGEDVLVQMHK-EVFN 282 Query: 312 DNFDTNFKNQISWLLFTTDSRLNNGTNEHIQLLNLLVKIS 351 + K ++ + + RL G NE IQL LL + + Sbjct: 283 LPIEEPKKVLLADKIGEYNFRLVEGANEIIQLEALLAQFT 322 >1SXJ-B nrPDB Length = 323 Score = 324 bits (831), Expect = 3e-89, Method: Composition-based stats. Identities = 115/331 (34%), Positives = 174/331 (52%), Gaps = 18/331 (5%) Query: 23 AQQPWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKEL 82 Q PWVEKYRP+ L ++ + L++ K N+PHM+ G PG GKT+++ L EL Sbjct: 7 LQLPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHEL 66 Query: 83 YGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEA 142 G +LELNASD+RGI +VR ++K+FA+ + + P +KI+ILDEA Sbjct: 67 LGRSYAD-GVLELNASDDRGIDVVRNQIKHFAQKKL---------HLPPGKHKIVILDEA 116 Query: 143 DSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASNAIDRLR 202 DSMTA AQ ALRRTME YS TRF CN +II+PL S+C+ R+ L + + RL Sbjct: 117 DSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSQCAILRYSKLSDEDVLKRLL 176 Query: 203 FISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNITSTQVEELAGV 262 I + E+VK + LE I+ + GD+R+ I LQS G L + N+ Sbjct: 177 QIIKLEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAG-HGLVNADNVFKIVDS----- 230 Query: 263 VPHDILIEIVEKVKSGDFDEIKKYVNTFMKSGWSAASVVNQLHEYYITNDNFDTNFKNQI 322 PH ++++ + + S D I+ K G+S+ +V + + ++ Sbjct: 231 -PHPLIVKKM-LLASNLEDSIQILRTDLWKKGYSSIDIVTTSFRVTKNLAQVKESVRLEM 288 Query: 323 SWLLFTTDSRLNNGTNEHIQLLNLLVKISQL 353 + T R+ G ++QL ++L KI +L Sbjct: 289 IKEIGLTHMRILEGVGTYLQLASMLAKIHKL 319 >1SXJ-C nrPDB Length = 340 Score = 319 bits (816), Expect = 2e-87, Method: Composition-based stats. Identities = 114/343 (33%), Positives = 185/343 (53%), Gaps = 21/343 (6%) Query: 13 ISKLAAEQSLAQQPWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKT 72 +S ++S PWVEKYRP+ LDEV Q+ +T ++K + LPH+LFYGPPGTGKT Sbjct: 1 MSTSTEKRSKENLPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKT 60 Query: 73 STILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCP 132 STI+AL +E+YG + + +LELNASD+RGI +VR ++K+FA Sbjct: 61 STIVALAREIYGKN-YSNMVLELNASDDRGIDVVRNQIKDFAST----------RQIFSK 109 Query: 133 PYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKAL 192 +K+IILDEAD+MT AQ+ALRR +E Y+ TRFC++ NY ++ L S+C++FRF+ L Sbjct: 110 GFKLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSQCTRFRFQPL 169 Query: 193 DASNAIDRLRFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNIT 252 R+ + E +K + ++++S GD+RR + +LQS K D I+ Sbjct: 170 PQEAIERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSC-KATLDNPDEDEIS 228 Query: 253 STQVEELAGVVPHDILIEIVEKVKSGDFDEIKKYVNTFMKSGWSA-----ASVVNQLHEY 307 + E G L +++ + D+ +N + A +V L +Y Sbjct: 229 DDVIYECCGAPRPSDLKAVLKSILEDDWGTAHYTLNKVRSAKGLALIDLIEGIVKILEDY 288 Query: 308 YITNDNFDTNFKNQISWLLFTTDSRLNNGTNEHIQLLNLLVKI 350 + N+ + +++ + ++ ++ G N+ IQ ++ I Sbjct: 289 ELQNEETRVHLLTKLADIEYS----ISKGGNDQIQGSAVIGAI 327 >1SXJ-E nrPDB Length = 354 Score = 310 bits (794), Expect = 6e-85, Method: Composition-based stats. Identities = 93/349 (26%), Positives = 164/349 (46%), Gaps = 28/349 (8%) Query: 27 WVEKYRPKNLDEVTAQDHAVTVLKK-TLKSANLPHMLFYGPPGTGKTSTILALTKELYGP 85 WV+KYRPK+L+ ++ + LK + + +LPH+L YGP GTGK + +AL + ++GP Sbjct: 4 WVDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGP 63 Query: 86 DLMKSRI------------LELNA-SDERGISIVREKVKNFARLTVSKPSK--------- 123 + + +I LELN S + I + N R+ + + K Sbjct: 64 GVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVD 123 Query: 124 -HDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLAS 182 D ++ YK +I++EA+S+T DAQ+ALRRTME YS R ++C+ ++ II P+ S Sbjct: 124 FQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKS 183 Query: 183 RCSKFRFKALDASNAIDRLRFISEQENVKCD-DGVLERILDISAGDLRRGITLLQSASKG 241 +C R A S L + E ++ + +L+RI S G+LR + +L+S + Sbjct: 184 QCLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESMALN 243 Query: 242 AQYLGDGKNITSTQVEELAGVVPHDILIEIVEKVKSGDFDEIKKYVNTFMKSGWSAASVV 301 + +S ++ +V H + +IV++ E + + + A ++ Sbjct: 244 NEL---ALKSSSPIIKPDWIIVIHKLTRKIVKERSVNSLIECRAVLYDLLAHCIPANIIL 300 Query: 302 NQLHEYYITNDNFDTNFKNQISWLLFTTDSRLNNGTNEHIQLLNLLVKI 350 +L + + +T K+ I D RL+ G L + K+ Sbjct: 301 KELTFSLLDVETLNTTNKSSIIEYSSVFDERLSLGNKAIFHLEGFIAKV 349 >2CHG-A nrPDB Length = 226 Score = 290 bits (742), Expect = 6e-79, Method: Composition-based stats. Identities = 109/240 (45%), Positives = 148/240 (61%), Gaps = 17/240 (7%) Query: 24 QQPWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELY 83 + WVEKYRP+ LDEV QD + LK ++ N+PH+LF GPPGTGKT+T +AL ++L+ Sbjct: 4 FEIWVEKYRPRTLDEVVGQDEVIQRLKGYVERKNIPHLLFSGPPGTGKTATAIALARDLF 63 Query: 84 GPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEAD 143 G + + +E+NASDERGI +VR K+K FAR P+KII LDEAD Sbjct: 64 GEN-WRDNFIEMNASDERGIDVVRHKIKEFARTAPIGG----------APFKIIFLDEAD 112 Query: 144 SMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASNAIDRLRF 203 ++TADAQ+ALRRTME YS RF L CNYV+RII+P+ SRC+ FRFK + RL Sbjct: 113 ALTADAQAALRRTMEMYSKSCRFILSCNYVSRIIEPIQSRCAVFRFKPVPKEAMKKRLLE 172 Query: 204 ISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNITSTQVEELAGVV 263 I E+E VK + LE ++ IS GD R+ I LQ A+ G+ + + + ++ Sbjct: 173 ICEKEGVKITEDGLEALIYISGGDFRKAINALQGAAA------IGEVVDADTIYQITATA 226 >3GLF-B nrPDB Length = 395 Score = 262 bits (670), Expect = 1e-70, Method: Composition-based stats. Identities = 66/291 (22%), Positives = 128/291 (43%), Gaps = 14/291 (4%) Query: 22 LAQQPWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHM-LFYGPPGTGKTSTILALTK 80 ++ Q K+RP+ +V Q+H +T L L + H LF G G GKTS L K Sbjct: 23 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 82 Query: 81 EL---YGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPP---- 133 L G + + E+G + ++ +R V + ++ L+N P Sbjct: 83 GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKV-EDTRDLLDNVQYAPARGR 141 Query: 134 YKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKALD 193 +K+ ++DE ++ + +AL +T+E +F L ++ + SRC +F KALD Sbjct: 142 FKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALD 201 Query: 194 ASNAIDRLRFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNITS 253 +L I +E++ + L+ + + G LR ++L A GDG+ +++ Sbjct: 202 VEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIAS----GDGQ-VST 256 Query: 254 TQVEELAGVVPHDILIEIVEKVKSGDFDEIKKYVNTFMKSGWSAASVVNQL 304 V + G + D + +VE + + + + +N G +++ ++ Sbjct: 257 QAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEM 307 >1NJG-A nrPDB Length = 250 Score = 235 bits (599), Expect = 2e-62, Method: Composition-based stats. Identities = 62/250 (24%), Positives = 111/250 (44%), Gaps = 14/250 (5%) Query: 21 SLAQQPWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHM-LFYGPPGTGKTSTILALT 79 S++ Q K+RP+ +V Q+H +T L L + H LF G G GKTS L Sbjct: 7 SMSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLA 66 Query: 80 KEL---YGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPP--- 133 K L G + + E+G + ++ +R V + ++ L+N P Sbjct: 67 KGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKV-EDTRDLLDNVQYAPARG 125 Query: 134 -YKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKAL 192 +K+ ++DE ++ + +AL +T+E +F L ++ + SRC +F KAL Sbjct: 126 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL 185 Query: 193 DASNAIDRLRFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNIT 252 D +L I +E++ + L+ + + G LR ++L A GDG+ ++ Sbjct: 186 DVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIAS----GDGQ-VS 240 Query: 253 STQVEELAGV 262 + V + G Sbjct: 241 TQAVSAMLGT 250 >1SXJ-A nrPDB Length = 516 Score = 202 bits (513), Expect = 2e-52, Method: Composition-based stats. Identities = 79/289 (27%), Positives = 126/289 (43%), Gaps = 28/289 (9%) Query: 23 AQQPWVEKYRPKNLDEVTAQDHAVTVLKKTL------KSANLPHM-----------LFYG 65 + + W KY P NL +V +V LK L K + H + YG Sbjct: 25 SDKLWTVKYAPTNLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYG 84 Query: 66 PPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKN-FARLTVSKPSKH 124 PPG GKT+ + +EL G D ILE NASD R +++ VKN ++V KH Sbjct: 85 PPGIGKTTAAHLVAQEL-GYD-----ILEQNASDVRSKTLLNAGVKNALDNMSVVGYFKH 138 Query: 125 DLENYPC-PPYKIIILDEADSMTADAQSALRRTME-TYSGVTRFCLICNYVTRI-IDPLA 181 + E + +II+DE D M+ + + + + T LICN + P Sbjct: 139 NEEAQNLNGKHFVIIMDEVDGMSGGDRGGVGQLAQFCRKTSTPLILICNERNLPKMRPFD 198 Query: 182 SRCSKFRFKALDASNAIDRLRFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKG 241 C +F+ DA++ RL I+ +E K D V++R++ + GD+R+ I LL + S Sbjct: 199 RVCLDIQFRRPDANSIKSRLMTIAIREKFKLDPNVIDRLIQTTRGDIRQVINLLSTISTT 258 Query: 242 AQYLGDGK-NITSTQVEELAGVVPHDILIEIVEKVKSGDFDEIKKYVNT 289 + + N S E+ + P DI ++++ D +N Sbjct: 259 TKTINHENINEISKAWEKNIALKPFDIAHKMLDGQIYSDIGSRNFTLND 307 >3U5Z-B nrPDB Length = 324 Score = 199 bits (506), Expect = 1e-51, Method: Composition-based stats. Identities = 72/338 (21%), Positives = 128/338 (37%), Gaps = 42/338 (12%) Query: 24 QQPWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGP-PGTGKTSTILALTKEL 82 + +KYRP +DE K +PH++ + P PGTGKT+ AL ++ Sbjct: 13 EHILEQKYRPSTIDECILPAFDKETFKSITSKGKIPHIILHSPSPGTGKTTVAKALCHDV 72 Query: 83 YGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEA 142 + ++ +N SD + I VR + NFA K+I++DE Sbjct: 73 ------NADMMFVNGSDCK-IDFVRGPLTNFASAASFD-----------GRQKVIVIDEF 114 Query: 143 D-SMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASN----- 196 D S A++Q LR ME YS + N + II PL SRC F + Sbjct: 115 DRSGLAESQRHLRSFMEAYSSNCSIIITANNIDGIIKPLQSRCRVITFGQPTDEDKIEMM 174 Query: 197 --AIDRLRFISEQENVKCDD-GVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNITS 253 I RL I + E + D V+ ++ + D R+ I L S S ++ Sbjct: 175 KQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLDAGILSL-- 232 Query: 254 TQVEELAGVVPHDILIEIVEKVKSGDFDEIKKYVNTFMKSGWSAASVVNQLHEYYITNDN 313 V G + ++E +K+ D +++ + + + +T + Sbjct: 233 --VTNDRGAIDD-----VLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQS 285 Query: 314 FDTNFKNQISWLLFTTDSRLNNGTNEHIQLLNLLVKIS 351 ++ ++ + N + L L ++++ Sbjct: 286 I-----IRMYEIVGENNQYHGIAANTELHLAYLFIQLA 318 >3PVS-A nrPDB Length = 447 Score = 183 bits (463), Expect = 1e-46, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 97/251 (38%), Gaps = 32/251 (12%) Query: 23 AQQPWVEKYRPKNLDEVTAQDHAVTV---LKKTLKSANLPHMLFYGPPGTGKTSTILALT 79 QP + RP+NL + Q H + L + +++ +L M+ +GPPGTGKT+ + Sbjct: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIA 71 Query: 80 KELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIIL 139 + NA ER IS V VK + + + +N I+ + Sbjct: 72 R-------------YANADVER-ISAVTSGVKE-----IREAIERARQNRNAGRRTILFV 112 Query: 140 DEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASNA-- 197 DE Q A +E + N + L SR + K+L + Sbjct: 113 DEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQ 172 Query: 198 ------IDRLRFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNI 251 D+ R Q+ V D+ I ++ GD RR + L+ + A+ GK + Sbjct: 173 VLTQAMEDKTRGYGGQDIVLPDE-TRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRV 231 Query: 252 TSTQ-VEELAG 261 + + E+AG Sbjct: 232 LKPELLTEIAG 242 >1HQC-A nrPDB Length = 324 Score = 86.8 bits (213), Expect = 1e-17, Method: Composition-based stats. Identities = 50/242 (20%), Positives = 78/242 (32%), Gaps = 47/242 (19%) Query: 31 YRPKNLDEVTAQDHAVTVLKKTLKSAN-----LPHMLFYGPPGTGKTSTILALTKELYGP 85 RPK LDE Q+ L+ L++A L H+L +GPPG GKT+ + EL Sbjct: 6 LRPKTLDEYIGQERLKQKLRVYLEAAKARKEPLEHLLLFGPPGLGKTTLAHVIAHEL--- 62 Query: 86 DLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSM 145 +N G +I EK + A + + + D I+ +DE + Sbjct: 63 --------GVNLRVTSGPAI--EKPGDLAAILANSLEEGD----------ILFIDEIHRL 102 Query: 146 TADAQSALRRTMETYSGVT------------------RFCLICNYVTRIIDPLASRCSKF 187 + A+ L ME + I PL SR Sbjct: 103 SRQAEEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTLIGATTRPGLITAPLLSRFGIV 162 Query: 188 -RFKALDASNAIDRLRFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLG 246 + + + V+ + I S G +R L + AQ G Sbjct: 163 EHLEYYTPEELAQGVMRDARLLGVRITEEAALEIGRRSRGTMRVAKRLFRRVRDFAQVAG 222 Query: 247 DG 248 + Sbjct: 223 EE 224 >1IN6-A nrPDB Length = 334 Score = 83.3 bits (204), Expect = 2e-16, Method: Composition-based stats. Identities = 53/325 (16%), Positives = 105/325 (32%), Gaps = 52/325 (16%) Query: 13 ISKLAAEQSLAQQPWVEKYRPKNLDEVTAQDHAVTVLKKTLKSAN-----LPHMLFYGPP 67 +S+ + V+ RPK+LDE Q++ L L++A L H+L GPP Sbjct: 1 MSEFLTPERTVYDSGVQFLRPKSLDEFIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPP 60 Query: 68 GTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLE 127 G G+T+ + EL + S VK + + Sbjct: 61 GLGRTTLAHIIASELQTNIHVTSG---------------PVLVKQGDMAAILTSLERGD- 104 Query: 128 NYPCPPYKIIILDEADSMTADAQSALRRTMETY-----------SGVTRFCL-------I 169 ++ +DE + + L +E + + R + Sbjct: 105 --------VLFIDEIHRLNKAVEELLYSAIEDFQIDIMIGKGPSAKSIRIDIQPFTLVGA 156 Query: 170 CNYVTRIIDPLASRCSKFR-FKALDASNAIDRLRFISEQENVKCDDGVLERILDISAGDL 228 + PL SR + ++ + +V+ +D E I S G Sbjct: 157 TTRSGLLSSPLRSRFGIILELDFYTVKELKEIIKRAASLMDVEIEDAAAEMIAKRSRGTP 216 Query: 229 RRGITLLQSASKGAQYLGDGKNITSTQVEELAGVVPHDILIEIVEKVKSGDFDEIKK--- 285 R I L + + + T ++ + + D ++ ++ EI + Sbjct: 217 RIAIRLTKRVRDMLTVVKADRINTDIVLKTMEVLNIDDEGLDEFDRKILKTIIEIYRGGP 276 Query: 286 -YVNTFMKSGWSAASVVNQLHEYYI 309 +N S A +++++E Y+ Sbjct: 277 VGLNALAASLGVEADTLSEVYEPYL 301 >6BLB-A nrPDB Length = 355 Score = 62.1 bits (149), Expect = 3e-10, Method: Composition-based stats. Identities = 38/242 (15%), Positives = 76/242 (31%), Gaps = 48/242 (19%) Query: 32 RPKNLDEVTAQDHAVTVLKKTLKSAN-----LPHMLFYGPPGTGKTSTILALTKELYGPD 86 RP L + Q ++ + +A L H L +GPPG GKT+ + +E+ Sbjct: 28 RPLKLADYIGQPSVREQMELFIHAARGRQEALDHTLIFGPPGLGKTTLANIIAQEM---- 83 Query: 87 LMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMT 146 G+S +K+ + + +P ++ +DE ++ Sbjct: 84 ---------------GVS-----IKSTSGPVLERPGDLAALLTNLEAGDVLFVDEIHRLS 123 Query: 147 ADAQSALRRTMETY-----------SGVTRFCL-------ICNYVTRIIDPLASRCSKF- 187 + L ME + + + L + +PL R Sbjct: 124 PIVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQ 183 Query: 188 RFKALDASNAIDRLRFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGD 247 R + + + + + ++ + I + G R LL+ A+ G Sbjct: 184 RLEFYNVEDLATIVSRSAGILGLEIEPQGAAEIAKRARGTPRIANRLLRRVRDFAEVRGQ 243 Query: 248 GK 249 G Sbjct: 244 GD 245 >3PFI-A nrPDB Length = 338 Score = 61.0 bits (146), Expect = 7e-10, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 70/242 (28%), Gaps = 48/242 (19%) Query: 31 YRPKNLDEVTAQDHAVTVLKKTLKSAN-----LPHMLFYGPPGTGKTSTILALTKELYGP 85 RP N D Q+ L + +A L H+LF GP G GKT+ ++ E+ Sbjct: 23 LRPSNFDGYIGQESIKKNLNVFIAAAKKRNECLDHILFSGPAGLGKTTLANIISYEM--- 79 Query: 86 DLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSM 145 +K A + K I+ +DE + Sbjct: 80 ---------------------SANIKTTAAPMIEKSGDLAAILTNLSEGDILFIDEIHRL 118 Query: 146 TADAQSALRRTMETYSGVT------------------RFCLICNYVTRIIDPLASR-CSK 186 + + L ME Y + +PL R + Sbjct: 119 SPAIEEVLYPAMEDYRLDIIIGSGPAAQTIKIDLPKFTLIGATTRAGMLSNPLRDRFGMQ 178 Query: 187 FRFKALDASNAIDRLRFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLG 246 FR + S L+ + + N C++ I S R + LL+ A Sbjct: 179 FRLEFYKDSELALILQKAALKLNKTCEEKAALEIAKRSRSTPRIALRLLKRVRDFADVND 238 Query: 247 DG 248 + Sbjct: 239 EE 240 >4D81-A nrPDB Length = 283 Score = 59.8 bits (143), Expect = 2e-09, Method: Composition-based stats. Identities = 55/282 (19%), Positives = 103/282 (36%), Gaps = 48/282 (17%) Query: 28 VEKYRPK-NLDEVTAQDHAVTVLKKTL-KSANLPHM---------LFYGPPGTGKTSTIL 76 V K +PK L+E+ + LK+ + + P + L YGPPG GKT Sbjct: 4 VMKEKPKVTLNEIVGLEDVKEALKEAVVYPSKRPDLFPLGWPRGILLYGPPGCGKTMIAA 63 Query: 77 ALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKI 136 A+ EL S + ++A+ + + KN A++ + EN P I Sbjct: 64 AVANEL------DSEFIHVDAASIMSKWLGEAE-KNVAKIFKTARELSKKENKPA----I 112 Query: 137 IILDEADSMTAD----------AQSALRRTME-----TYSGVTRFCLICNYVTRIIDPLA 181 I +DE D++ A ++ + M+ N R+ +P Sbjct: 113 IFIDELDALLASYTSEVGGEARVRNQFLKEMDGLADKNEISKVYVIGATNKPWRLDEPFL 172 Query: 182 SRC-SKFRFKALDASNAIDRLRFISEQENVKCDDGV-LERILDISAG----DLRRGITLL 235 R + D ++ ++ L+ S VK D V LE + +++ G D+R + Sbjct: 173 RRFQKRIYITLPDKAHRLELLKHYSS--KVKLDPNVNLEELAELTDGYTASDIRDIVQSA 230 Query: 236 QSASKGAQYLGDGKN---ITSTQVEELAGVVPHDILIEIVEK 274 + + + I E+ V + ++++ Sbjct: 231 HMRVVKEMFEKNLQEPRAINMDDFREVLKVRKPSVNQDMLKA 272 >5EQT-A nrPDB Length = 257 Score = 57.5 bits (137), Expect = 9e-09, Method: Composition-based stats. Identities = 42/185 (22%), Positives = 64/185 (34%), Gaps = 37/185 (20%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDER--GISIVREKVKNFARLTV 118 +L YGPPG GKT AL E+ NA+ R G +VR+ + ARL V Sbjct: 42 VLLYGPPGCGKTLMAKALAHEV-------------NATFIRVVGSELVRKYIGEGARL-V 87 Query: 119 SKPSKHDLENYPCPPYKIIILDEADSM--------TADAQSALRRTMET--------YSG 162 + + E P II +DE D++ T + R M+ G Sbjct: 88 HELFELAKEKAP----TIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRG 143 Query: 163 VTRFCLICNYVTRIIDPLASRCSKFRFKALDASNAIDRLRFISEQ-ENVKCDDGVLERIL 221 + N + L R + + RL + +K L I Sbjct: 144 NVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKLKGVDLRAIA 203 Query: 222 DISAG 226 +++ G Sbjct: 204 EMTEG 208 >5VHP-E nrPDB Length = 262 Score = 56.8 bits (135), Expect = 2e-08, Method: Composition-based stats. Identities = 49/221 (22%), Positives = 79/221 (35%), Gaps = 38/221 (17%) Query: 62 LFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKP 121 L YGPPGTGKT A+ +L L++ +S SIV + + ARL + + Sbjct: 44 LLYGPPGTGKTLLARAVASQL------DCNFLKVVSS-----SIVDKYIGESARL-IREM 91 Query: 122 SKHDLENYPCPPYKIIILDEADSM--------TADAQSALRRTMETYSG--------VTR 165 + ++ PC II +DE D++ T+ + R ME + + Sbjct: 92 FNYARDHQPC----IIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVK 147 Query: 166 FCLICNYVTRIIDPLASRCSKFR--FKALDASNAIDRLRFISEQENVKCDDGVLERILDI 223 + N + L R L A + I K + E I+ + Sbjct: 148 MIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKL 207 Query: 224 SAG----DLRRGITLLQSASKGAQYLGDGKNITSTQVEELA 260 S G DLR T + A + + V ++A Sbjct: 208 SDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVA 248 >4LCB-A nrPDB Length = 367 Score = 55.6 bits (132), Expect = 4e-08, Method: Composition-based stats. Identities = 52/283 (18%), Positives = 99/283 (34%), Gaps = 49/283 (17%) Query: 27 WVEKYRPK-NLDEVTAQDHAVTVLKK-TLKSANLPHM---------LFYGPPGTGKTSTI 75 + K +PK + ++ D LK+ + + P + L YGPPG GKT Sbjct: 88 LIMKEKPKVSFSDIVGLDDVKEALKEAIIYPSKRPDLFPLGWPRGILLYGPPGNGKTMLA 147 Query: 76 LALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYK 135 A+ E+ S + ++A+ + + KN A++ + +N P Sbjct: 148 AAVANEI------DSYFIHVDAASIMSKWLGEAE-KNVAKIFNTAREYSKKDNKPA---- 196 Query: 136 IIILDEADSMTAD----------AQSALRRTM-------ETYSGVTRFCLICNYVTRIID 178 II +DE D++ ++ + M E Y N R+ + Sbjct: 197 IIFVDEIDALLGTYTSEVGGEVRVRNQFLKEMDGIMDKNENYM--VYVIGATNKPWRLDE 254 Query: 179 PLASRCSKFRFKALDASNAIDRLRFISEQENVKCDDGVLERILDISAG----DLRRGITL 234 P R K + L N L VK + L+ + ++ G D+R + Sbjct: 255 PFLRRFQKRIYVPLPDFNQRLALFKYYTS-KVKLGNVDLQELAKMTEGYSASDIRDIVQS 313 Query: 235 LQSASKGAQY---LGDGKNITSTQVEELAGVVPHDILIEIVEK 274 + L + + IT +E+ + + E+++ Sbjct: 314 AHMRVVKEMFEKNLSEPREITMDDFKEVLKIRKPSVNQELLKA 356 >6EF2-J nrPDB Length = 262 Score = 55.2 bits (131), Expect = 5e-08, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 66/186 (35%), Gaps = 38/186 (20%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 ++ YGPPGTGKT A+ + + ++ G +V++ + +R+ V + Sbjct: 42 VILYGPPGTGKTLLARAVAH------HTDCKFIRVS-----GAELVQKYIGEGSRM-VRE 89 Query: 121 PSKHDLENYPCPPYKIIILDEADSM-------TADAQSALRRTMETY---------SGVT 164 E+ P II +DE DS+ + S ++RTM S Sbjct: 90 LFVMAREHAPS----IIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSKNI 145 Query: 165 RFCLICNYVTRIIDPLASRCSK---FRFKALDASNAIDRLRFISEQENVKCDDGV-LERI 220 + + N + + L F + + LR + G+ L ++ Sbjct: 146 KIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARAEILR--IHSRKMNLTRGINLRKV 203 Query: 221 LDISAG 226 + G Sbjct: 204 AEKMNG 209 >6MSD-E nrPDB Length = 403 Score = 54.8 bits (130), Expect = 6e-08, Method: Composition-based stats. Identities = 49/221 (22%), Positives = 79/221 (35%), Gaps = 38/221 (17%) Query: 62 LFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKP 121 L YGPPGTGKT A+ +L L++ +S SIV + + ARL + + Sbjct: 185 LLYGPPGTGKTLLARAVASQL------DCNFLKVVSS-----SIVDKYIGESARL-IREM 232 Query: 122 SKHDLENYPCPPYKIIILDEADSM--------TADAQSALRRTMETYSG--------VTR 165 + ++ PC II +DE D++ T+ + R ME + + Sbjct: 233 FNYARDHQPC----IIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVK 288 Query: 166 FCLICNYVTRIIDPLASRCSKFR--FKALDASNAIDRLRFISEQENVKCDDGVLERILDI 223 + N + L R L A + I K + E I+ + Sbjct: 289 MIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKL 348 Query: 224 SAG----DLRRGITLLQSASKGAQYLGDGKNITSTQVEELA 260 S G DLR T + A + + V ++A Sbjct: 349 SDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVA 389 >4LGM-A nrPDB Length = 295 Score = 54.4 bits (129), Expect = 7e-08, Method: Composition-based stats. Identities = 51/292 (17%), Positives = 97/292 (33%), Gaps = 57/292 (19%) Query: 19 EQSLAQQPWVEKYRPKNLDEVTAQDHAVTVLKK-TLKSANLPHM---------LFYGPPG 68 E + ++P V + ++ D L++ + P + L YGPPG Sbjct: 14 EVVITEKPKV------SFKDIVGLDDVKEALREAIIYPTKRPDLFPLGWPRGILLYGPPG 67 Query: 69 TGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLEN 128 GKT A+ E+ S ++L+A+ + + KN A + + +N Sbjct: 68 CGKTMIAAAVANEI------DSIFMQLDAASVMSKWLGEAE-KNVANVFKMAREESKKQN 120 Query: 129 YPCPPYKIIILDEADSMTA-----------------DAQSALRRTMETYSGVTRFCLICN 171 P II +D+ D++ L E Y N Sbjct: 121 KPA----IIFIDQLDALLGVYSTEVGGEARVRNQFLKEMDGLLDKSENYK--VYVIGATN 174 Query: 172 YVTRIIDPLASRCSKFRFKALDASNAIDRLRFISEQENVKCDDGVLERILDISAG----D 227 R+ + R K + L L + + LE + ++ G D Sbjct: 175 KPWRLDEAFLRRFQKRIYVPLPDYEQRLSLFKYYTSKIKLDTEVSLEELAKLTEGYTASD 234 Query: 228 LRRG-----ITLLQSASKGAQYLGDGKNITSTQVEELAGVVPHDILIEIVEK 274 +R I +++ K LG+ + IT +++ V + E+++ Sbjct: 235 IRDIVQAAHIKVVKEMFKNN--LGEPRTITLQDFKDILKVRMPSVNPELIKA 284 >5VHP-C nrPDB Length = 266 Score = 53.7 bits (127), Expect = 1e-07, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 55/161 (34%), Gaps = 35/161 (21%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 +L YGPPGTGKT A+ + ++ S +V++ + AR+ V + Sbjct: 57 VLLYGPPGTGKTLLARAVAH------HTDCTFIRVSGS-----ELVQKFIGEGARM-VRE 104 Query: 121 PSKHDLENYPCPPYKIIILDEADSM--------TADAQSALRRTME--------TYSGVT 164 E+ P II +DE DS+ + R +E + Sbjct: 105 LFVMAREHAPS----IIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNI 160 Query: 165 RFCLICNYVTRIIDPLASRCSK---FRFKALDASNAIDRLR 202 + + N + + L F + +D L+ Sbjct: 161 KVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK 201 >5M32-h nrPDB Length = 355 Score = 53.7 bits (127), Expect = 1e-07, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 55/161 (34%), Gaps = 35/161 (21%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 +L YGPPGTGKT A+ + ++ S +V++ + AR+ V + Sbjct: 149 VLLYGPPGTGKTLLARAVAH------HTDCTFIRVSGS-----ELVQKFIGEGARM-VRE 196 Query: 121 PSKHDLENYPCPPYKIIILDEADSM--------TADAQSALRRTME--------TYSGVT 164 E+ P II +DE DS+ + R +E + Sbjct: 197 LFVMAREHAPS----IIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNI 252 Query: 165 RFCLICNYVTRIIDPLASRCSK---FRFKALDASNAIDRLR 202 + + N + + L F + +D L+ Sbjct: 253 KVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK 293 >3WHK-A nrPDB Length = 270 Score = 53.7 bits (127), Expect = 1e-07, Method: Composition-based stats. Identities = 46/247 (18%), Positives = 81/247 (32%), Gaps = 57/247 (23%) Query: 32 RPK-NLDEVTAQDHAVTVLKKTLKSANLPH--------------MLFYGPPGTGKTSTIL 76 RP +++ + L++ ++ L H +L YGPPG GKT Sbjct: 11 RPNVTYNDIGGLKKQLQELREAIEL-PLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAK 69 Query: 77 ALTKELYGPDLMKSRILELNASDER--GISIVREKVKNFARLTVSKPSKHDLENYPCPPY 134 A+ E+ NA+ R G +VR+ + ARL V + + E P Sbjct: 70 AIAHEV-------------NATFIRVVGSELVRKYIGEGARL-VHELFELAKEKAP---- 111 Query: 135 KIIILDEADSM--------TADAQSALRRTMET--------YSGVTRFCLICNYVTRIID 178 II +DE D++ T + R M+ G + N + Sbjct: 112 TIIFIDEIDAIGAKRLDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDP 171 Query: 179 PLASRCSKFRF--KALDASNAIDRLRFISEQENVKCDDGVLERILDIS---AGDLRRGIT 233 L R L + ++ I ++ DD + + + G + +T Sbjct: 172 ALLRPGRFDRLIEVPLPDEFSRAQILQIHSRKMTTDDDINWQELARSTDEFNGAQLKAVT 231 Query: 234 LLQSASK 240 + Sbjct: 232 VEAGMIA 238 >2CE7-A nrPDB Length = 476 Score = 53.7 bits (127), Expect = 1e-07, Method: Composition-based stats. Identities = 52/306 (16%), Positives = 90/306 (29%), Gaps = 56/306 (18%) Query: 31 YRPK-----NLDEVTAQDHAVTVLKKTLKSANLPH------------MLFYGPPGTGKTS 73 Y+P +V + A+ LK+ ++ P +L GPPGTGKT Sbjct: 5 YKPSGNKRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTL 64 Query: 74 TILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPP 133 A+ E ++ SD + + V + PC Sbjct: 65 LARAVAGE------ANVPFFHISGSDFVELFV------GVGAARVRDLFAQAKAHAPC-- 110 Query: 134 YKIIILDEADSMTADAQSALRRTMETY---------------SGVTRFCLICNYVTRIID 178 I+ +DE D++ + L + S + I+D Sbjct: 111 --IVFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFDSKEGIIVMAATNRPDILD 168 Query: 179 PLASRCSKFRFK---ALDASNAIDRLRFISEQENVKCDDGVLERILDISAG----DLRRG 231 P R +F K ++ I + +D LE I + G DL Sbjct: 169 PALLRPGRFDKKIVVDPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENL 228 Query: 232 ITLLQSASKGAQYLGDGKNITSTQVEE-LAGVVPHDILIEIVEKVKSGDFDEIKKYVNTF 290 + + ++ +AG +LI EK + V+T Sbjct: 229 VNEAALLAAREGRDKITMKDFEEAIDRVIAGPARKSLLISPAEKRIIAYHEAGHAVVSTV 288 Query: 291 MKSGWS 296 + +G Sbjct: 289 VPNGEP 294 >3JCO-J nrPDB Length = 405 Score = 53.3 bits (126), Expect = 2e-07, Method: Composition-based stats. Identities = 32/161 (19%), Positives = 58/161 (36%), Gaps = 35/161 (21%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 ++ YGPPGTGKT A+ + + ++ G +V++ + +R+ V + Sbjct: 185 VILYGPPGTGKTLLARAVAH------HTDCKFIRVS-----GAELVQKYIGEGSRM-VRE 232 Query: 121 PSKHDLENYPCPPYKIIILDEADSM-------TADAQSALRRTMETY---------SGVT 164 E+ P II +DE DS+ + S ++RTM S Sbjct: 233 LFVMAREHAPS----IIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSKNI 288 Query: 165 RFCLICNYVTRIIDPLASRCSK---FRFKALDASNAIDRLR 202 + + N + + L F + + LR Sbjct: 289 KIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARAEILR 329 >5GJQ-J nrPDB Length = 406 Score = 52.9 bits (125), Expect = 2e-07, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 55/161 (34%), Gaps = 35/161 (21%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 +L YGPPGTGKT A+ + ++ S +V++ + AR+ V + Sbjct: 186 VLLYGPPGTGKTLLARAVAH------HTDCTFIRVSGS-----ELVQKFIGEGARM-VRE 233 Query: 121 PSKHDLENYPCPPYKIIILDEADSM--------TADAQSALRRTME--------TYSGVT 164 E+ P II +DE DS+ + R +E + Sbjct: 234 LFVMAREHAPS----IIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNI 289 Query: 165 RFCLICNYVTRIIDPLASRCSK---FRFKALDASNAIDRLR 202 + + N + + L F + +D L+ Sbjct: 290 KVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK 330 >6EF1-K nrPDB Length = 276 Score = 52.9 bits (125), Expect = 2e-07, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 63/182 (34%), Gaps = 36/182 (19%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 +L YGPPGTGKT + A+ + K+ + +N S V + + R+ V Sbjct: 57 VLLYGPPGTGKTMLVKAVA------NSTKAAFIRVNGS-----EFVHKYLGEGPRM-VRD 104 Query: 121 PSKHDLENYPCPPYKIIILDEADSMTADAQSA--------------LRRTMETY--SGVT 164 + EN P II +DE DS+ A L M+ + S Sbjct: 105 VFRLARENAPS----IIFIDEVDSIATKRFDAQTGSDREVQRILIELLTQMDGFDQSTNV 160 Query: 165 RFCLICNYVTRIIDPLASRCSK---FRFKALDASNAIDRLRF-ISEQENVKCDDGVLERI 220 + + N + L F +L + I+ + ++ + + I Sbjct: 161 KVIMATNRADTLDPALLRPGRLDRKIEFPSLRDRRERRLIFGTIASKMSLAPEADLDSLI 220 Query: 221 LD 222 + Sbjct: 221 IR 222 >5WVI-K nrPDB Length = 428 Score = 51.7 bits (122), Expect = 5e-07, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 63/182 (34%), Gaps = 36/182 (19%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 +L YGPPGTGKT + A+ + K+ + +N S V + + R+ V Sbjct: 209 VLLYGPPGTGKTMLVKAVA------NSTKAAFIRVNGS-----EFVHKYLGEGPRM-VRD 256 Query: 121 PSKHDLENYPCPPYKIIILDEADSMTADAQSA--------------LRRTMETY--SGVT 164 + EN P II +DE DS+ A L M+ + S Sbjct: 257 VFRLARENAPS----IIFIDEVDSIATKRFDAQTGSDREVQRILIELLTQMDGFDQSTNV 312 Query: 165 RFCLICNYVTRIIDPLASRCSK---FRFKALDASNAIDRLRF-ISEQENVKCDDGVLERI 220 + + N + L F +L + I+ + ++ + + I Sbjct: 313 KVIMATNRADTLDPALLRPGRLDRKIEFPSLRDRRERRLIFGTIASKMSLAPEADLDSLI 372 Query: 221 LD 222 + Sbjct: 373 IR 374 >2XSZ-D nrPDB Length = 378 Score = 51.7 bits (122), Expect = 5e-07, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 61/188 (32%), Gaps = 24/188 (12%) Query: 65 GPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKH 124 GPPG T + E+ + L L + D I + +V+ V++ + Sbjct: 149 GPPGVVHTVS----LHEIDVINSRTQGFLALFSGDTGEI---KSEVREQINAKVAEWREE 201 Query: 125 DLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICN------------Y 172 ++ +DE + ++ S L R +E+ + N Sbjct: 202 GKAEIIPG---VLFIDEVHMLDIESFSFLNRALESDMAPV-LIMATNRGITRIRGTSYQS 257 Query: 173 VTRIIDPLASRCSKFRFKALDASNAIDRLRFISEQENVKCDDGVLERILDIS-AGDLRRG 231 I L R + LR E+E+V+ + + I LR Sbjct: 258 PHGIPIDLLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYA 317 Query: 232 ITLLQSAS 239 I L+ +AS Sbjct: 318 IQLITAAS 325 >1XXI-E nrPDB Length = 334 Score = 51.4 bits (121), Expect = 6e-07, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 84/251 (33%), Gaps = 18/251 (7%) Query: 47 TVLKKTLKSANLPHMLF-YGPPGTGKTSTILALTKELYGPDLMKSRILELNA-------- 97 L + ++ H L PG G + I AL++ L + Sbjct: 12 EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAG 71 Query: 98 SDERGISIVREKVKN-FARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRT 156 + ++ EK KN V + ++ E+ K++ + +A +T A +AL +T Sbjct: 72 THPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKT 131 Query: 157 METYSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASNAIDRLRFISEQENVKCDDGV 216 +E T F L R++ L SRC A+ L V Sbjct: 132 LEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLS-----REVTMSQDA 186 Query: 217 LERILDISAGDLRRGITLLQS---ASKGAQYLGDGKNITSTQVEELAGVVPHDILIEIVE 273 L L +SAG + L Q ++ ++ S L + H+ + Sbjct: 187 LLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQAPARLH 246 Query: 274 KVKSGDFDEIK 284 + + D +K Sbjct: 247 WLATLLMDALK 257 >2QBY-A nrPDB Length = 386 Score = 50.6 bits (119), Expect = 1e-06, Method: Composition-based stats. Identities = 53/324 (16%), Positives = 114/324 (35%), Gaps = 31/324 (9%) Query: 37 DEVTAQDHAVTVLKKTLKS----ANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRI 92 DE+ ++ + + L ++ YG GTGKT+ + + +L+ L K + Sbjct: 20 DELPHREDQIRKIASILAPLYREEKPNNIFIYGLTGTGKTAVVKFVLSKLHKKFLGKFKH 79 Query: 93 LELNASDERGISIVREKVKN-------FARLTVSKPSKHDLEN-YPCPPYKIIILDEADS 144 + +N V + F L++++ + ++ +I+LDE D+ Sbjct: 80 VYINTRQIDTPYRVLADLLESLDVKVPFTGLSIAELYRRLVKAVRDYGSQVVIVLDEIDA 139 Query: 145 MTADAQSALRRTM-----ETYSGVTRFCLICNYVTRIIDPLASRCS------KFRFKALD 193 + + E F I N V + +D L R + F + Sbjct: 140 FVKKYNDDILYKLSRINSEVNKSKISFIGITNDV-KFVDLLDPRVKSSLSEEEIIFPPYN 198 Query: 194 ASNAIDRLR---FISEQENVKCDD--GVLERILDISAGDLRRGITLLQSASKGAQYLGDG 248 A D L ++ + V D+ + + GD RR + LL+ + + A+ + D Sbjct: 199 AEELEDILTKRAQMAFKPGVLPDNVIKLCAALAAREHGDARRALDLLRVSGEIAERMKDT 258 Query: 249 KNITSTQVEELAGVVPHDILIEIVEKVKSGDFDEIKKYVNTFMKSG-WSAASVVNQLHEY 307 K + V + D + +I+ + + V+ + S V + + Sbjct: 259 K-VKEEYVYMAKEEIERDRVRDIILTLPFHSKLVLMAVVSISSEENVVSTTGAVYETYLN 317 Query: 308 YITNDNFDTNFKNQISWLLFTTDS 331 + + ++S ++ D Sbjct: 318 ICKKLGVEAVTQRRVSDIINELDM 341 >6B5D-A nrPDB Length = 309 Score = 49.8 bits (117), Expect = 2e-06, Method: Composition-based stats. Identities = 46/267 (17%), Positives = 83/267 (31%), Gaps = 46/267 (17%) Query: 35 NLDEVTAQDHAVTVLKKTLKSANL------------PHMLFYGPPGTGKTSTILALTKEL 82 +LD++ VL + + L M+ GPPGTGKT A+ E Sbjct: 28 SLDDIIGMHDVKQVLHEAVTLPLLVPEFFQGLRSPWKAMVLAGPPGTGKTLIARAIASES 87 Query: 83 YGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEA 142 S + + R K + E II +DE Sbjct: 88 SSTFFTVSS----------------TDLSSKWRGDSEKIVRLLFELARFYAPSIIFIDEI 131 Query: 143 DSM-----TADAQSALRRTMETY------------SGVTRFCLICNYVTRIIDPLASRCS 185 D++ + A RR + S N + + L R Sbjct: 132 DTLGGQRGNSGEHEASRRVKSEFLVQMDGSQNKFDSRRVFVLAATNIPWELDEALRRRFE 191 Query: 186 KFRFKALDASNAIDRLRFISEQENVKCDDGVLERILDISAG-DLRRGITLLQSASKGAQY 244 K F L +A +L S + K D+ + + + G ++L ++A+ Sbjct: 192 KRIFIPLPDIDARKKLIEKSMEGTPKSDEINYDDLAARTEGFSGADVVSLCRTAAINVLR 251 Query: 245 LGDGKNITSTQVEELAGVVPHDILIEI 271 D K++ ++ + +++ I Sbjct: 252 RYDTKSLRGGELTAAMESLKAELVRNI 278 >6EF0-L nrPDB Length = 273 Score = 49.8 bits (117), Expect = 2e-06, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 66/184 (35%), Gaps = 34/184 (18%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 +L YGPPGTGKT A+ + + + AS IV + + AR+ + + Sbjct: 55 VLLYGPPGTGKTLLAKAVAATI------GANFIFSPAS-----GIVDKYIGESARI-IRE 102 Query: 121 PSKHDLENYPCPPYKIIILDEADSM--------TADAQSALRRTMETYS--------GVT 164 + E+ PC II +DE D++ T+ + R ME + G T Sbjct: 103 MFAYAKEHEPC----IIFMDEVDAIGGRRFSEGTSADREIQRTLMELLTQMDGFDNLGQT 158 Query: 165 RFCLICNYVTRIIDPLASRCSKFRFK--ALDASNAIDRLRFISEQENVKCDDGVLERILD 222 + + N + L R L + I + K + E + Sbjct: 159 KIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVK 218 Query: 223 ISAG 226 +S G Sbjct: 219 MSDG 222 >2XSZ-A nrPDB Length = 367 Score = 49.4 bits (116), Expect = 2e-06, Method: Composition-based stats. Identities = 49/293 (16%), Positives = 92/293 (31%), Gaps = 73/293 (24%) Query: 39 VTAQDHAVTVLKKTLKSANLPHM-----LFYGPPGTGKTSTILALTKEL---------YG 84 + Q++A ++ M L GPPGTGKT+ LA+ +EL G Sbjct: 53 LVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVG 112 Query: 85 PDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPY---------- 134 ++ + I + E + ++K + + HDL+ P Sbjct: 113 SEVYSTEIKKTEVLMENFRRAIGLRIKEGPPGIIQDVTLHDLDVANARPQGGQDILSMMG 172 Query: 135 -----------------------------------KIIILDEADSMTADAQSALRRTMET 159 ++ +DE + + + L R +E+ Sbjct: 173 QLMKPKKTEITDKLRGEINKVVNKYIDQGIAELVPGVLFVDEVHMLDIECFTYLHRALES 232 Query: 160 -------YSGVTRFCLI-----CNYVTRIIDPLASRCSKFRFKALDASNAIDRLRFISEQ 207 ++ C+I I L R R ++ ++ Sbjct: 233 SIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMIIRTMLYTPQEMKQIIKIRAQT 292 Query: 208 ENVKCDDGVLERILDI-SAGDLRRGITLLQSASKGAQYLGDGKNITSTQVEEL 259 E + + L + +I + LR + LL A+ A+ G +I VEE+ Sbjct: 293 EGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKINGK-DSIEKEHVEEI 344 >3H4M-A nrPDB Length = 285 Score = 49.1 bits (115), Expect = 3e-06, Method: Composition-based stats. Identities = 42/186 (22%), Positives = 65/186 (34%), Gaps = 38/186 (20%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDER--GISIVREKVKNFARLTV 118 +L YGPPGTGKT A+ E NA+ R G +V++ + A L V Sbjct: 54 ILLYGPPGTGKTLLAKAVA-------------TETNATFIRVVGSELVKKFIGEGASL-V 99 Query: 119 SKPSKHDLENYPCPPYKIIILDEA--------DSMTADAQSALRRTMETYS--------G 162 K E P II +DE D++T + R M+ + G Sbjct: 100 KDIFKLAKEKAPS----IIFIDEIDAIAAKRTDALTGGDREVQRTLMQLLAEMDGFDARG 155 Query: 163 VTRFCLICNYVTRIIDPLASRCSKFRFKALDASNAIDRLRFISEQ-ENVKCDDGV-LERI 220 + N + + R + A + RL + + + V LE I Sbjct: 156 DVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEI 215 Query: 221 LDISAG 226 ++ G Sbjct: 216 AKMTEG 221 >5V8F-9 nrPDB Length = 513 Score = 49.1 bits (115), Expect = 3e-06, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 58/162 (35%), Gaps = 23/162 (14%) Query: 43 DHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERG 102 + + L K + + GPPGTGKT+ + + ++ + + L L+ S R Sbjct: 86 EQVMNFLAKAISEHRSDSLYITGPPGTGKTAQLDMIIRQKF-------QSLPLSLSTPRS 138 Query: 103 ISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQS----------- 151 ++R N L+ + LE+ I L E S+ Sbjct: 139 KDVLRHTNPNLQNLSWFELPDGRLESVAVTSINCISLGEPSSIFQKIFDSFQDLNGPTLQ 198 Query: 152 -----ALRRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFR 188 L++ +E Y T F ++ + + R++ S R Sbjct: 199 IKNMQHLQKFLEPYHKKTTFVVVLDEMDRLLHANTSETQSVR 240 >6AP1-A nrPDB Length = 519 Score = 49.1 bits (115), Expect = 3e-06, Method: Composition-based stats. Identities = 47/228 (20%), Positives = 79/228 (34%), Gaps = 48/228 (21%) Query: 3 EGFGPNKKRKISKLAAEQSLAQQPWVEKYRPKNLDEVTAQDHAVTVLKKTL-KSANLPHM 61 E G +K+ + L+++P V K+ ++V + A LK+ + PH+ Sbjct: 6 EDNGGEDNKKLRGALSSAILSEKPNV-KW-----EDVAGLEGAKEALKEAVILPVKFPHL 59 Query: 62 -----------LFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKV 110 L YGPPGTGK+ A+ E S +++SD +V + + Sbjct: 60 FKGNRKPTSGILLYGPPGTGKSYLAKAVATE------ANSTFFSVSSSD-----LVSKWM 108 Query: 111 KNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTA----DAQSALRRTMETY------ 160 + V + EN P II +DE D++T A RR Sbjct: 109 GE-SEKLVKQLFAMARENKPS----IIFIDEVDALTGTRGEGESEASRRIKTELLVQMNG 163 Query: 161 ----SGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASNAIDRLRFI 204 S N ++ + R + + L A + I Sbjct: 164 VGNDSQGVLVLGATNIPWQLDSAIRRRFERRIYIPLPDLAARTTMFEI 211 >6EMW-B nrPDB Length = 225 Score = 48.7 bits (114), Expect = 4e-06, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 48/129 (37%), Gaps = 12/129 (9%) Query: 39 VTAQDHAVTVLKKTLKSAN---------LPHMLFYGPPGTGKTSTILALTKELYGPDLMK 89 V Q AV + K ++ A + +F GP G GKT AL + ++G D Sbjct: 23 VIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDD--- 79 Query: 90 SRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADA 149 ++ ++ S+ V V E PY +I+ DE + D Sbjct: 80 DAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDV 139 Query: 150 QSALRRTME 158 + L + ++ Sbjct: 140 FNILLQVLD 148 >5UJM-A nrPDB Length = 522 Score = 48.3 bits (113), Expect = 5e-06, Method: Composition-based stats. Identities = 47/287 (16%), Positives = 99/287 (34%), Gaps = 36/287 (12%) Query: 43 DHAVTVLKKTLKSANLPH----MLFYGPPGTGKTSTIL----ALTKELYGPDLMKSRILE 94 + + ++S L H M G PGTGKT+T+ L + D+ + +E Sbjct: 169 EQEFQDIYNFVESKLLDHTGGCMYISGVPGTGKTATVHEVIRCLQQAAQANDVPPFQYIE 228 Query: 95 LNA---SDERGISIV----REKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTA 147 +N ++ + + K A +K ++++DE D + Sbjct: 229 VNGMKLTEPHQVYVQILQKLTGQKATANHAAELLAKQFCTRGSPQETTVLLVDELDILWT 288 Query: 148 DAQSALRRTMETYS-GVTRFCL--ICNYVTRIIDPLASRCS------KFRFKALDASNAI 198 Q + + + R + I N + + +R S + F+ S Sbjct: 289 HKQDIMYNLFDWPTHKEARLVVLAIANTMDLPERIMMNRVSSRLGLTRMCFQPYTYSQLQ 348 Query: 199 DRLRFISEQENVKCDDGVLERILDISA---GDLRRGITLLQSASKGAQYLGDGKNITSTQ 255 LR + +D ++ + A GD RR + + + A++ ++ + S Sbjct: 349 QILRSRLKHLK-AFEDDAIQLVARKVAALSGDARRCLDICRRATEICEF--SQQKPDSPG 405 Query: 256 VEELA---GVVPHDILIEIVEKVKSGDFDE---IKKYVNTFMKSGWS 296 + +A V + +K+ E ++ + F +SG Sbjct: 406 LVTIAHSMEAVDEMFSSSYITAIKNSSVLEQSFLRAILAEFRRSGLE 452 >5VQ9-D nrPDB Length = 432 Score = 48.3 bits (113), Expect = 5e-06, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 65/174 (37%), Gaps = 27/174 (15%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMK---SRILELNASDERGISIVREKVKNFARLT 117 +L +GPPGTGKTS AL ++L + +++E+N+ Sbjct: 175 VLLHGPPGTGKTSLCKALAQKLTIRLSSRYRYGQLIEINSHSLFSKWFSESG---KLVTK 231 Query: 118 VSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTME------------------T 159 + + + +++ + +++D+ +S+TA A++A R E Sbjct: 232 MFQKIQDLIDDKDALVF--VLIDQVESLTA-ARNACRAGTEPSDAIRVVNAVLTQIDQIK 288 Query: 160 YSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASNAIDRLRFISEQENVKCD 213 N +I R ++ ++ AI ++ +E +KC Sbjct: 289 RHSNVVILTTSNITEKIDVAFVDRADIKQYIGPPSAAAIFKIYLSCLEELMKCQ 342 >1XWI-A nrPDB Length = 322 Score = 48.3 bits (113), Expect = 5e-06, Method: Composition-based stats. Identities = 53/339 (15%), Positives = 105/339 (30%), Gaps = 42/339 (12%) Query: 32 RPKN-LDEVTAQDHAVTVLKKTL-KSANLPHM-----------LFYGPPGTGKTSTILAL 78 RP +V + A LK+ + PH+ L +GPPGTGK+ A+ Sbjct: 6 RPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV 65 Query: 79 TKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIII 138 E S +++SD +V + + + V + EN P II Sbjct: 66 ATE-----ANNSTFFSISSSD-----LVSKWLGE-SEKLVKNLFQLARENKPS----IIF 110 Query: 139 LDEADSM----TADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDA 194 +DE DS+ + + A RR + + + N ++ + Sbjct: 111 IDEIDSLCGSRSENESEAARRIKTEFLVQMQGVGVDNDGILVLGAT-------NIPWVLD 163 Query: 195 SNAIDRLRFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLG-DGKNITS 253 S R + + + G + +T G + G G +I+ Sbjct: 164 SAIRRRFEKRIY--IPLPEPHARAAMFKLHLGTTQNSLTEADFRELGRKTDGYSGADISI 221 Query: 254 TQVEELAGVVPHDILIEIVEKVKSGDFDEIKKYVNTFMKSGWSAASVVNQLHEYYITNDN 313 + L V +KV+ + V+ + ++ + D Sbjct: 222 IVRDALMQPVRKVQSATHFKKVRGPSRADPNHLVDDLLTPCSPGDPGAIEMTWMDVPGDK 281 Query: 314 FDTNFKNQISWLLFTTDSRLNNGTNEHIQLLNLLVKISQ 352 + L ++++ ++ ++L Q Sbjct: 282 LLEPVVSMSDMLRSLSNTKPTVNEHDLLKLKKFTEDFGQ 320 >5WC0-A nrPDB Length = 472 Score = 47.9 bits (112), Expect = 7e-06, Method: Composition-based stats. Identities = 45/267 (16%), Positives = 83/267 (31%), Gaps = 46/267 (17%) Query: 35 NLDEVTAQDHAVTVLKKTLKSANL------------PHMLFYGPPGTGKTSTILALTKEL 82 +LD++ VL + + L M+ GPPGTGKT A+ E Sbjct: 191 SLDDIIGMHDVKQVLHEAVTLPLLVPEFFQGLRSPWKAMVLAGPPGTGKTLIARAIASES 250 Query: 83 YGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEA 142 S + + R K + E II +D+ Sbjct: 251 SSTFFTVSS----------------TDLSSKWRGDSEKIVRLLFELARFYAPSIIFIDQI 294 Query: 143 DSM-----TADAQSALRRTMETY------------SGVTRFCLICNYVTRIIDPLASRCS 185 D++ + A RR + S N + + L R Sbjct: 295 DTLGGQRGNSGEHEASRRVKSEFLVQMDGSQNKFDSRRVFVLAATNIPWELDEALRRRFE 354 Query: 186 KFRFKALDASNAIDRLRFISEQENVKCDDGVLERILDISAG-DLRRGITLLQSASKGAQY 244 K F L +A +L S + K D+ + + + G ++L ++A+ Sbjct: 355 KRIFIPLPDIDARKKLIEKSMEGTPKSDEINYDDLAARTEGFSGADVVSLCRTAAINVLR 414 Query: 245 LGDGKNITSTQVEELAGVVPHDILIEI 271 D K++ ++ + +++ I Sbjct: 415 RYDTKSLRGGELTAAMESLKAELVRNI 441 >6FVU-L nrPDB Length = 388 Score = 47.5 bits (111), Expect = 8e-06, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 66/184 (35%), Gaps = 34/184 (18%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 +L YGPPGTGKT A+ + + + AS IV + + AR+ + + Sbjct: 170 VLLYGPPGTGKTLLAKAVAATI------GANFIFSPAS-----GIVDKYIGESARI-IRE 217 Query: 121 PSKHDLENYPCPPYKIIILDEADSM--------TADAQSALRRTMETYS--------GVT 164 + E+ PC II +DE D++ T+ + R ME + G T Sbjct: 218 MFAYAKEHEPC----IIFMDEVDAIGGRRFSEGTSADREIQRTLMELLTQMDGFDNLGQT 273 Query: 165 RFCLICNYVTRIIDPLASRCSKFRFK--ALDASNAIDRLRFISEQENVKCDDGVLERILD 222 + + N + L R L + I + K + E + Sbjct: 274 KIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVK 333 Query: 223 ISAG 226 +S G Sbjct: 334 MSDG 337 >5WVI-L nrPDB Length = 437 Score = 47.5 bits (111), Expect = 9e-06, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 66/184 (35%), Gaps = 34/184 (18%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 +L YGPPGTGKT A+ + + + AS IV + + AR+ + + Sbjct: 218 VLLYGPPGTGKTLLAKAVAATI------GANFIFSPAS-----GIVDKYIGESARI-IRE 265 Query: 121 PSKHDLENYPCPPYKIIILDEADSM--------TADAQSALRRTMETYS--------GVT 164 + E+ PC II +DE D++ T+ + R ME + G T Sbjct: 266 MFAYAKEHEPC----IIFMDEVDAIGGRRFSEGTSADREIQRTLMELLTQMDGFDNLGQT 321 Query: 165 RFCLICNYVTRIIDPLASRCSKFRFK--ALDASNAIDRLRFISEQENVKCDDGVLERILD 222 + + N + L R L + I + K + E + Sbjct: 322 KIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVK 381 Query: 223 ISAG 226 +S G Sbjct: 382 MSDG 385 >5VC7-A nrPDB Length = 564 Score = 47.5 bits (111), Expect = 9e-06, Method: Composition-based stats. Identities = 38/256 (14%), Positives = 79/256 (30%), Gaps = 39/256 (15%) Query: 62 LFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKP 121 L YGPPG GKT A+ E + + + +G ++ + V + + + Sbjct: 324 LLYGPPGVGKTLLAKAVATE------SNANFISI-----KGPEVLSKWVGE-SEKAIREI 371 Query: 122 SKHDLENYPCPPYKIIILDEADSM-----TADAQSALRRTMETYSGVTR--------FCL 168 K + P I+ LDE DS+ T R + + Sbjct: 372 FKKAKQVAPA----IVFLDEIDSIAPRRGTTSDSGVTERIVNQLLTSLDGIEVMNGVVVI 427 Query: 169 ICNYVTRIIDPLASRCSKF----RFKALDASNAIDRLRFISEQENVKCDDGVLERILDIS 224 I+DP R +F D + L+ ++ + D L I + Sbjct: 428 GATNRPDIMDPALLRAGRFDKLIYIPPPDKEARLSILKVHTKNMPLAPDVD-LNDIAQRT 486 Query: 225 AGDLRRGITLL--QSASKGAQYLGDGKNITSTQVEELAGVVPHDILIEIVE---KVKSGD 279 G + + L ++ + D +++ + + + E+++ + Sbjct: 487 EGYVGADLENLCREAGMNAYRENPDATSVSQKNFLDALKTIRPSVDEEVIKFYRTLSETM 546 Query: 280 FDEIKKYVNTFMKSGW 295 + + G Sbjct: 547 SKSVSERRKQLQDQGL 562 Score = 40.2 bits (92), Expect = 0.001, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 16/85 (18%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 ++ YGPPGTGKT A+ E + L +N + + K + + + Sbjct: 46 VILYGPPGTGKTLIARAVANE------SGANFLSINGPE------IMSKYYGQSEQKLRE 93 Query: 121 PSKHDLENYPCPPYKIIILDEADSM 145 E P II +DE DS+ Sbjct: 94 IFSKAEETAPS----IIFIDEIDSI 114 >6NYV-B nrPDB Length = 314 Score = 47.5 bits (111), Expect = 1e-05, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 56/186 (30%), Gaps = 39/186 (20%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 +L +GPPG GKT A+ E LN S + V Sbjct: 75 LLLFGPPGNGKTLLARAVATE--------CSATFLNIS-----------AASLTSKYVGD 115 Query: 121 PSKHDLENYPCPPY---KIIILDEAD----SMTADAQSALRRTMETY-------SGV--- 163 K + + II +DE D ++ A RR + G Sbjct: 116 GEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSSEHEASRRLKTEFLVEFDGLPGNPDG 175 Query: 164 --TRFCLICNYVTRIIDPLASRCSKFRFKALDASNAIDRLRF-ISEQENVKCDDGVLERI 220 N + + R +K + +L + L + +++ D L R+ Sbjct: 176 DRIVVLAATNRPQELDEAALRRFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRL 235 Query: 221 LDISAG 226 I+ G Sbjct: 236 AKITDG 241 >3EIH-A nrPDB Length = 340 Score = 46.7 bits (109), Expect = 1e-05, Method: Composition-based stats. Identities = 46/228 (20%), Positives = 79/228 (34%), Gaps = 48/228 (21%) Query: 3 EGFGPNKKRKISKLAAEQSLAQQPWVEKYRPKNLDEVTAQDHAVTVLKKTL-KSANLPHM 61 E G +K+ + L+++P V K+ ++V + A LK+ + PH+ Sbjct: 8 EDNGGEDNKKLRGALSSAILSEKPNV-KW-----EDVAGLEGAKEALKEAVILPVKFPHL 61 Query: 62 -----------LFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKV 110 L YGPPGTGK+ A+ E S +++SD +V + + Sbjct: 62 FKGNRKPTSGILLYGPPGTGKSYLAKAVATE------ANSTFFSVSSSD-----LVSKWM 110 Query: 111 KNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTA----DAQSALRRTMETY------ 160 + V + EN P II +D+ D++T A RR Sbjct: 111 GE-SEKLVKQLFAMARENKPS----IIFIDQVDALTGTRGEGESEASRRIKTELLVQMNG 165 Query: 161 ----SGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASNAIDRLRFI 204 S N ++ + R + + L A + I Sbjct: 166 VGNDSQGVLVLGATNIPWQLDSAIRRRFERRIYIPLPDLAARTTMFEI 213 >5UBV-A nrPDB Length = 246 Score = 46.7 bits (109), Expect = 1e-05, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 72/222 (32%), Gaps = 49/222 (22%) Query: 35 NLDEVTAQDHAVTVLKKTLK-----------SANLPH-MLFYGPPGTGKTSTILALTKEL 82 +V D A L++ ++ LP +L GPPGTGKT A+ E Sbjct: 4 RFSDVHGCDEAKEELQELVEFLRNPEKFSNLGGKLPKGVLLVGPPGTGKTLLARAVAGEA 63 Query: 83 YGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYK---IIIL 139 P S F + V +K E + K I+ + Sbjct: 64 GVPFFYMSG-------------------SEFDEIYVGVGAKRVRELFNAAKAKAPSIVFI 104 Query: 140 DEADSM-----TADAQ------SALRRTMETYSGVTRFCL--ICNYVTRIIDPLASRCSK 186 DE D++ + DA + L M+ ++ + + N+ + L Sbjct: 105 DELDAIGGRRNSRDATYVRQTLNQLLTEMDGFAQNSGVIILGATNFPESLDKALTRPGRF 164 Query: 187 FRFKALDASNAIDRLRFISEQ-ENVKCDDGV-LERILDISAG 226 R + + R+ + + +K V + I ++G Sbjct: 165 DRHVHVSLPDVRGRIAILKHHAKKIKIGSDVNIAAIAARTSG 206 >5C18-A nrPDB Length = 785 Score = 46.7 bits (109), Expect = 1e-05, Method: Composition-based stats. Identities = 51/273 (18%), Positives = 87/273 (31%), Gaps = 49/273 (17%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 +L YGPPGTGKT A+ E + +N + + K+ + + K Sbjct: 240 ILLYGPPGTGKTLIARAVANE------TGAFFFLINGPE------IMSKLAGESESNLRK 287 Query: 121 PSKHDLENYPCPPYKIIILDEADSMTADAQ-----------SALRRTME--TYSGVTRFC 167 + +N P II +DE D++ + S L M+ Sbjct: 288 AFEEAEKNAPA----IIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVM 343 Query: 168 LICNYVTRIIDPLASRCSKFRFKALDAS------NAIDRLRFISEQ-ENVKCDDGV-LER 219 N I L RF D +A RL + +N+K D V LE+ Sbjct: 344 AATNRPNSIDPALR------RFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQ 397 Query: 220 ILDISAGDLRRGI------TLLQSASKGAQYLGDGKNITSTQVEELAGVVPHDILIEIVE 273 + + + G + + LQ+ K + +V V D + + Sbjct: 398 VANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQ 457 Query: 274 KVKSGDFDEIKKYVNTFMKSGWSAASVVNQLHE 306 S + + + + V +L E Sbjct: 458 SNPSALRETVVEVPQVTWEDIGGLEDVKRELQE 490 Score = 43.7 bits (101), Expect = 1e-04, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 64/202 (31%), Gaps = 36/202 (17%) Query: 43 DHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERG 102 +H LK + + +LFYGPPG GKT A+ E + N +G Sbjct: 497 EHPDKFLKFGMTPSK--GVLFYGPPGCGKTLLAKAIANE-----------CQANFISIKG 543 Query: 103 ISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQ------------ 150 ++ + V + + PC ++ DE DS+ Sbjct: 544 PELLTMWFGE-SEANVREIFDKARQAAPC----VLFFDELDSIAKARGGNIGDGGGAADR 598 Query: 151 --SALRRTMETYS--GVTRFCLICNYVTRIIDPLAS--RCSKFRFKALDASNAIDRLRFI 204 + + M+ S N I + R + + L + + Sbjct: 599 VINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKA 658 Query: 205 SEQENVKCDDGVLERILDISAG 226 + +++ D LE + ++ G Sbjct: 659 NLRKSPVAKDVDLEFLAKMTNG 680 >4CIU-A nrPDB Length = 727 Score = 46.7 bits (109), Expect = 1e-05, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 83/250 (33%), Gaps = 27/250 (10%) Query: 39 VTAQDHAVTVLKKTLKSAN---------LPHMLFYGPPGTGKTSTILALTKELYGPDLMK 89 V Q+ AV + ++ + + LF GP G GKT AL ++ D Sbjct: 428 VIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEA- 486 Query: 90 SRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADA 149 ++ ++ S+ V V + + E PY +I+LD + D Sbjct: 487 --MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDAVEKAHPDV 544 Query: 150 QSALRRTME---TYSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASNAIDRLRFISE 206 + L + ++ G R N V + L S + RF LD ++ + + + Sbjct: 545 FNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVS 604 Query: 207 Q-----------ENVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNITSTQ 255 E V + I I+ L+R L+ + + S Sbjct: 605 HNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSEN 664 Query: 256 -VEELAGVVP 264 + + G P Sbjct: 665 GYDPVYGARP 674 Score = 39.4 bits (90), Expect = 0.003, Method: Composition-based stats. Identities = 40/253 (15%), Positives = 78/253 (30%), Gaps = 42/253 (16%) Query: 27 WVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPD 86 E+ LD V +D + + L+ + + G PG GKT+ + L + + Sbjct: 26 LTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRI---- 81 Query: 87 LMKSRILELNASDE---RGISIVREKVKNF-ARLTVSKPSKHDLENYPCPPYK-----II 137 +N +G ++ + A + L+ K I+ Sbjct: 82 --------INGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVIL 133 Query: 138 ILDEADSMTA--------DAQSALRRTMETYSGVTRFCLICNYVTRIID---PLASRCSK 186 +D +M DA + L+ + + + I+ L R K Sbjct: 134 FIDALHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQK 193 Query: 187 FRFKALDASNAIDRLRFISE----QENVKCDDGVLERILDISAGDLR------RGITLLQ 236 + I LR + E +V+ D + +S + + I L+ Sbjct: 194 VFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLID 253 Query: 237 SASKGAQYLGDGK 249 A+ + D K Sbjct: 254 EAASSIRMQIDSK 266 >5G4G-A nrPDB Length = 721 Score = 46.7 bits (109), Expect = 2e-05, Method: Composition-based stats. Identities = 37/231 (16%), Positives = 75/231 (32%), Gaps = 36/231 (15%) Query: 62 LFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKP 121 L YGPPG GKT A+ E + + + +G ++ + V + + + Sbjct: 500 LLYGPPGVGKTLLAKAVATE------SNANFISI-----KGPEVLSKWVGE-SEKAIREI 547 Query: 122 SKHDLENYPCPPYKIIILDEADSM-----TADAQSALRRTMETYSGVTR--------FCL 168 K + P I+ LDE DS+ T R + + Sbjct: 548 FKKAKQVAPA----IVFLDEIDSIAPRRGTTSDSGVTERIVNQLLTSLDGIEVMNGVVVI 603 Query: 169 ICNYVTRIIDPLASRCSKF----RFKALDASNAIDRLRFISEQENVKCDDGVLERILDIS 224 I+DP R +F D + L+ ++ + D L I + Sbjct: 604 GATNRPDIMDPALLRAGRFDKLIYIPPPDKEARLSILKVHTKNMPLAPDVD-LNDIAQRT 662 Query: 225 AGDLRRGITLL--QSASKGAQYLGDGKNITSTQVEELAGVVPHDILIEIVE 273 G + + L ++ + D +++ + + + E+++ Sbjct: 663 EGYVGADLENLCREAGMNAYRENPDATSVSQKNFLDALKTIRPSVDEEVIK 713 Score = 39.8 bits (91), Expect = 0.002, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 16/85 (18%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 ++ YGPPGTGKT A+ E + L +N + + K + + + Sbjct: 222 VILYGPPGTGKTLIARAVANE------SGANFLSINGPE------IMSKYYGQSEQKLRE 269 Query: 121 PSKHDLENYPCPPYKIIILDEADSM 145 E P II +DE DS+ Sbjct: 270 IFSKAEETAPS----IIFIDEIDSI 290 >6EM8-A nrPDB Length = 818 Score = 46.7 bits (109), Expect = 2e-05, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 48/129 (37%), Gaps = 12/129 (9%) Query: 39 VTAQDHAVTVLKKTLKSAN---------LPHMLFYGPPGTGKTSTILALTKELYGPDLMK 89 V Q AV + K ++ A + +F GP G GKT AL + ++G D Sbjct: 510 VIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDD--- 566 Query: 90 SRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADA 149 ++ ++ S+ V V E PY +I+ DE + D Sbjct: 567 DAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDV 626 Query: 150 QSALRRTME 158 + L + ++ Sbjct: 627 FNILLQVLD 635 Score = 46.4 bits (108), Expect = 2e-05, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 67/208 (32%), Gaps = 23/208 (11%) Query: 35 NLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILE 94 LD V +D +T + + L + + G PG GKT+ L + + + + Sbjct: 178 TLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIV------NNEVP 231 Query: 95 LNASDERGISIVREKV--KNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTA----- 147 D+R +S+ V R + K +E I+ +DE ++ Sbjct: 232 ETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGNVILFIDELHTLVGAGGAE 291 Query: 148 ---DAQSALRRTMETYSGVTRFCLICNYVTRIID---PLASRCSKFRFKALDASNAIDRL 201 DA + L+ + + + I+ L R + + + L Sbjct: 292 GAIDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAIL 351 Query: 202 RF----ISEQENVKCDDGVLERILDISA 225 + + D +E + +S Sbjct: 352 KGLRDRYEAHHRINISDEAIEAAVKLSN 379 >6B5C-A nrPDB Length = 307 Score = 46.7 bits (109), Expect = 2e-05, Method: Composition-based stats. Identities = 41/188 (21%), Positives = 60/188 (31%), Gaps = 39/188 (20%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 +L GPPGTGKT A+ E N S + + R K Sbjct: 61 VLMVGPPGTGKTMLAKAVATE--------CGTTFFNVSS--------STLTSKYRGESEK 104 Query: 121 PSKHDLENYPCPPYKIIILDEADSM-----TADAQSALRRTMET---------------- 159 + E I +D+ DS+ T+D A RR Sbjct: 105 LVRLLFEMARFYAPTTIFIDQIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDD 164 Query: 160 YSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASNAIDRLRFISEQENVKCDDGV-LE 218 S + N+ I + L R K + L + L I+ +E V+ D + LE Sbjct: 165 PSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKINLRE-VELDPDIQLE 223 Query: 219 RILDISAG 226 I + G Sbjct: 224 DIAEKIEG 231 >6ED3-A nrPDB Length = 848 Score = 46.7 bits (109), Expect = 2e-05, Method: Composition-based stats. Identities = 53/355 (14%), Positives = 110/355 (30%), Gaps = 48/355 (13%) Query: 27 WVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPD 86 + R LD V +D+ + + + L + + G PG GKT+ + L + + D Sbjct: 168 LTARAREGKLDPVIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGD 227 Query: 87 LMKSRILELNASDERGISIVREKVKNFA-----RLTVSKPSKHDLENY-PCPPYKIIILD 140 + R +IV + + R + K L++ I +D Sbjct: 228 VP---------ESLRDKTIVALDLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFID 278 Query: 141 EADSMTA---------DAQSALRRTMETYSGVTRFCLICNYVTRIID---PLASRCSKFR 188 E ++ DA + ++ + + + I+ L R + Sbjct: 279 ELHTIVGAGATGEGAMDAGNMIKPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVY 338 Query: 189 FKALDASNAIDRLRF----ISEQENVKCDDGVLERILDISAGDLR------RGITLLQSA 238 + I LR V+ D L +S + + I L+ A Sbjct: 339 VGEPSVEDTIGILRGLKDRYEVHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEA 398 Query: 239 SKGAQYLGDGKNITSTQVEELAGVVPHDILIEIVEKVKSGDFDEIKKYVNTFMKSGWSAA 298 + + D + + +VE L + + + + ++ + + K + A Sbjct: 399 ASRLRMEIDSRPVEIDEVERLVRRLEIEEM-ALSKEEDEASAERLAKLRSELADQKEKLA 457 Query: 299 SVVNQLHEYYITNDNFDTNFKNQISWLLFTTDSRLNNGTNEHIQLLNLLVKISQL 353 +T + +I L L G +E + L K ++L Sbjct: 458 ---------ELTTRWQNEKNAIEIVRDLKEQLEAL-RGESERAERDGDLAKAAEL 502 Score = 43.7 bits (101), Expect = 1e-04, Method: Composition-based stats. Identities = 42/270 (15%), Positives = 80/270 (29%), Gaps = 32/270 (11%) Query: 39 VTAQDHAVTVLKKTLKSAN---------LPHMLFYGPPGTGKTSTILALTKELYGPDLMK 89 V Q AVT + ++ + +F GP G GKT AL L+ + Sbjct: 572 VIGQKAAVTAVSDAVRRSRAGVSDPNRPTGAFMFLGPTGVGKTELAKALADFLFDDERA- 630 Query: 90 SRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADA 149 ++ ++ S+ V + + E PY +++ DE + D Sbjct: 631 --MVRIDMSEYGEKHTVARLIGAPPGYVGYEAGGQLTEAVRRRPYTVVLFDEIEKAHPDV 688 Query: 150 QSALRRTMETYS-----------GVTRFCLICNYVTRIIDPLASRCSKFRFKALDASNAI 198 L + ++ T L N + + FK I Sbjct: 689 FDVLLQVLDEGRLTDGHGRTVDFRNTILILTSNLGSGGSAEQVLAAVRATFKP----EFI 744 Query: 199 DRLRFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNITSTQ--- 255 +RL + E + ++ V + ++ R LQ + Sbjct: 745 NRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRRLQLQVSLPAKRWLAQRGFDPVYGA 804 Query: 256 --VEELAGVVPHDILIEIVEKVKSGDFDEI 283 + L D L +++ + D D + Sbjct: 805 RPLRRLVQQAIGDQLAKMLLAGQVHDGDTV 834 >3D8B-A nrPDB Length = 357 Score = 46.7 bits (109), Expect = 2e-05, Method: Composition-based stats. Identities = 41/282 (14%), Positives = 82/282 (29%), Gaps = 56/282 (19%) Query: 33 PKNLDEVTAQDHAVTVLKKTLK------------SANLPHMLFYGPPGTGKTSTILALTK 80 P N +++ + A +K+ + +L +GPPGTGKT + Sbjct: 80 PVNWEDIAGVEFAKATIKEIVVWPMLRPDIFTGLRGPPKGILLFGPPGTGKTLIGKCIAS 139 Query: 81 ELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILD 140 + + ++AS + + V P +I +D Sbjct: 140 Q------SGATFFSISASSLTSKWVGEGE------KMVRALFAVARCQQPA----VIFID 183 Query: 141 EADSMTADAQSALRRTMETYSGVTRFCL-----------------ICNYVTRIIDPLASR 183 E DS+ +Q + T F + N I + R Sbjct: 184 EIDSLL--SQRGDGEHESSRRIKTEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARRR 241 Query: 184 CSKFRFKALDASNAIDRL-RFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKGA 242 K + L ++A ++ + +E + +E+I+ S D G + Q + + Sbjct: 242 LVKRLYIPLPEASARKQIVINLMSKEQCCLSEEEIEQIVQQS--DAFSGADMTQLCREAS 299 Query: 243 QYLGDGKNITSTQVEELAGVVPHDILIEIVEKVKSGDFDEIK 284 + D + I F ++ Sbjct: 300 LGPIRSLQ------TADIATITPDQVRPIAYIDFENAFRTVR 335 >6MCK-A nrPDB Length = 606 Score = 46.4 bits (108), Expect = 2e-05, Method: Composition-based stats. Identities = 51/273 (18%), Positives = 88/273 (32%), Gaps = 49/273 (17%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 +L YGPPGTGKT A+ E + +N + + K+ + + K Sbjct: 33 ILLYGPPGTGKTLIARAVANE------TGAFFFLINGPE------IMSKLAGESESNLRK 80 Query: 121 PSKHDLENYPCPPYKIIILDEADSMTADAQ-----------SALRRTMETYSGVTRFCL- 168 + +N P II +DE D++ + S L M+ + Sbjct: 81 AFEEAEKNAPA----IIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVM 136 Query: 169 -ICNYVTRIIDPLASRCSKFRFKALDAS------NAIDRLRFISEQ-ENVKCDDGV-LER 219 N I L RF D +A RL + +N+K D V LE+ Sbjct: 137 AATNRPNSIDPALR------RFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQ 190 Query: 220 ILDISAGDLRRGI------TLLQSASKGAQYLGDGKNITSTQVEELAGVVPHDILIEIVE 273 + + + G + + LQ+ K + +V V D + + Sbjct: 191 VANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQ 250 Query: 274 KVKSGDFDEIKKYVNTFMKSGWSAASVVNQLHE 306 S + + + + V +L E Sbjct: 251 SNPSALRETVVEVPQVTWEDIGGLEDVKRELQE 283 Score = 43.3 bits (100), Expect = 2e-04, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 64/202 (31%), Gaps = 36/202 (17%) Query: 43 DHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERG 102 +H LK + + +LFYGPPG GKT A+ E + N +G Sbjct: 290 EHPDKFLKFGMTPSK--GVLFYGPPGCGKTLLAKAIANE-----------CQANFISIKG 336 Query: 103 ISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQ------------ 150 ++ + V + + PC ++ DE DS+ Sbjct: 337 PELLTMWFGE-SEANVREIFDKARQAAPC----VLFFDELDSIAKARGGNIGDGGGAADR 391 Query: 151 --SALRRTMETYS--GVTRFCLICNYVTRIIDPLAS--RCSKFRFKALDASNAIDRLRFI 204 + + M+ S N I + R + + L + + Sbjct: 392 VINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKA 451 Query: 205 SEQENVKCDDGVLERILDISAG 226 + +++ D LE + ++ G Sbjct: 452 NLRKSPVAKDVDLEFLAKMTNG 473 >5VHF-B nrPDB Length = 340 Score = 46.4 bits (108), Expect = 2e-05, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 82/229 (35%), Gaps = 51/229 (22%) Query: 28 VEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPH--------------MLFYGPPGTGKTS 73 VEK + ++ D+ + +K++++ L H ++ YGPPGTGKT Sbjct: 84 VEKAPQETYADIGGLDNQIQEIKESVEL-PLTHPEYYEEMGIKPPKGVILYGPPGTGKTL 142 Query: 74 TILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPP 133 A+ + + L + S ++++ + + +L V + + E+ P Sbjct: 143 LAKAVA------NQTSATFLRVVGS-----ELIQKYLGDGPKL-VRELFRVAEEHAPS-- 188 Query: 134 YKIIILDEADSM-------TADAQSALRRTMETY---------SGVTRFCLICNYVTRII 177 I+ +DE D++ + + ++RTM G + + N + + Sbjct: 189 --IVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLD 246 Query: 178 DPLASRCSK---FRFKALDASNAIDRLRFISEQENVKCDDGVLERILDI 223 L F L R+ I DD L+ ++ Sbjct: 247 PALIRPGRIDRKIEF-PLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMA 294 >5VHN-D nrPDB Length = 262 Score = 46.4 bits (108), Expect = 2e-05, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 56/181 (30%), Gaps = 35/181 (19%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 +L YGPPG GKT A+ + + + S V++ + R+ V Sbjct: 58 VLMYGPPGCGKTMLAKAVAH------HTTAAFIRVVGS-----EFVQKYLGEGPRM-VRD 105 Query: 121 PSKHDLENYPCPPYKIIILDEADSMTADAQSA--------------LRRTMETYSG--VT 164 + EN P II +DE D++ A L M+ + Sbjct: 106 VFRLAKENAPA----IIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNV 161 Query: 165 RFCLICNYVTRIIDPLASRCSK---FRFKALDASNAIDRLRFISEQENVKCDDGVLERIL 221 + + N + L F D I+ + N+ + + + + Sbjct: 162 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVA 221 Query: 222 D 222 Sbjct: 222 R 222 >6MSK-B nrPDB Length = 440 Score = 46.4 bits (108), Expect = 2e-05, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 82/229 (35%), Gaps = 51/229 (22%) Query: 28 VEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPH--------------MLFYGPPGTGKTS 73 VEK + ++ D+ + +K++++ L H ++ YGPPGTGKT Sbjct: 176 VEKAPQETYADIGGLDNQIQEIKESVEL-PLTHPEYYEEMGIKPPKGVILYGPPGTGKTL 234 Query: 74 TILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPP 133 A+ + + L + S ++++ + + +L V + + E+ P Sbjct: 235 LAKAVA------NQTSATFLRVVGS-----ELIQKYLGDGPKL-VRELFRVAEEHAPS-- 280 Query: 134 YKIIILDEADSM-------TADAQSALRRTMETY---------SGVTRFCLICNYVTRII 177 I+ +DE D++ + + ++RTM G + + N + + Sbjct: 281 --IVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLD 338 Query: 178 DPLASRCSK---FRFKALDASNAIDRLRFISEQENVKCDDGVLERILDI 223 L F L R+ I DD L+ ++ Sbjct: 339 PALIRPGRIDRKIEF-PLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMA 386 >6HE4-H nrPDB Length = 267 Score = 46.4 bits (108), Expect = 2e-05, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 65/184 (35%), Gaps = 34/184 (18%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 +L YGPPGTGKT A+ + ++ + + S V++ + ARL V + Sbjct: 56 VLLYGPPGTGKTLLAKAVA------NQTRATFIRVVGS-----EFVQKYIGEGARL-VRE 103 Query: 121 PSKHDLENYPCPPYKIIILDEADSM--------TADAQSALRRTMET--------YSGVT 164 + E P II +DE D++ T+ + R M+ G Sbjct: 104 VFQLAKEKAPS----IIFIDELDAIAARRTNSDTSGDREVQRTMMQLLAELDGFDPRGDV 159 Query: 165 RFCLICNYVTRIIDPLASRCSKFRFKALDASNAIDRLRFISEQ-ENVKCDDGV-LERILD 222 + N + + + R + R++ +K + V + + Sbjct: 160 KVIGATNRIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKELAR 219 Query: 223 ISAG 226 I+ G Sbjct: 220 ITEG 223 >5Z6Q-A nrPDB Length = 392 Score = 46.4 bits (108), Expect = 2e-05, Method: Composition-based stats. Identities = 46/281 (16%), Positives = 91/281 (32%), Gaps = 45/281 (16%) Query: 36 LDEVTAQDHAVTVLKKTLKSANLP------------HMLFYGPPGTGKTSTILALTKELY 83 D++ QD A L++ + +L +L +GPPG GKT A+ E Sbjct: 117 FDDIAGQDLAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAE-- 174 Query: 84 GPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEAD 143 + ++A+ + + V E P II +DE D Sbjct: 175 ----SNATFFNISAASLTSKYVGEGE------KLVRALFAVARELQPS----IIFIDEVD 220 Query: 144 SMT----ADAQSALRRTMETY---------SGVTRFCL--ICNYVTRIIDPLASRCSKFR 188 S+ A RR + +G R + N + + + R K Sbjct: 221 SLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFIKRV 280 Query: 189 FKALDASNAIDRLRFISE-QENVKCDDGVLERILDISAGDLRRGITLL-QSASKGAQYLG 246 + +L L ++ L ++ ++ G +T L + A+ G Sbjct: 281 YVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIREL 340 Query: 247 DGKNITSTQVEELAGVVPHDILIEIVEKVKSGDFDEIKKYV 287 + + + E+ + D + + +S ++ Y+ Sbjct: 341 KPEQVKNMSASEMRNIRLSDFTESLKKIKRSVSPQTLEAYI 381 >4YPL-A nrPDB Length = 555 Score = 46.0 bits (107), Expect = 2e-05, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 80/252 (31%), Gaps = 50/252 (19%) Query: 22 LAQQPWVEKYRPKNLD----------EVTAQDHAVTVLKKTLKSANL----------PHM 61 L + PW K P+ LD + + + L L P + Sbjct: 55 LTEVPW-SKADPEVLDINHTRQVLDEDHYGLKDVKERILEYLAVRQLTQGLDVRNKAPIL 113 Query: 62 LFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKP 121 + GPPG GKTS ++ + M + ++ R + +R + + K Sbjct: 114 VLVGPPGVGKTSLGRSIARS------MNRKFHRISLGGVRDEAEIRGHRRTYIGAMPGKL 167 Query: 122 SKHDLENYPCPPYKIIILDEADSMTADAQS----ALRRTMETYSGVT------------- 164 + P +I+LD+ D M++D + A+ ++ T Sbjct: 168 IHAMKQVGVINP--VILLDQIDKMSSDWRGDPASAMLEVLDPEQNNTFTDHYLDVPYDLS 225 Query: 165 --RFCLICNYVTRIIDPLASRCSKFRFKALDASNAIDRLRFISEQENVKCDDGVLERILD 222 F N + I PL R R + V+ + +E ++ Sbjct: 226 KVFFITTANTLQTIPRPLLDRMEVIEIPGYTNMEKQAIARQYLWPKQVR--ESGMEGRIE 283 Query: 223 ISAGDLRRGITL 234 ++ + R I+ Sbjct: 284 VTDAAILRVISE 295 >6QI9-D nrPDB Length = 463 Score = 46.0 bits (107), Expect = 2e-05, Method: Composition-based stats. Identities = 24/147 (16%), Positives = 48/147 (32%), Gaps = 17/147 (11%) Query: 106 VREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTR 165 ++ +V+ V++ + ++ +DE + ++ S L R +E+ Sbjct: 268 IKSEVREQINAKVAEWREEGKAEIIPG---VLFIDEVHMLDIESFSFLNRALESDMAPV- 323 Query: 166 FCLICN------------YVTRIIDPLASRCSKFRFKALDASNAIDRLRFISEQENVKCD 213 + N I L R + LR E+E+V+ Sbjct: 324 LIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMS 383 Query: 214 DGVLERILDIS-AGDLRRGITLLQSAS 239 + + I LR I L+ +AS Sbjct: 384 EDAYTVLTRIGLETSLRYAIQLITAAS 410 Score = 29.8 bits (65), Expect = 1.8, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPD 86 +L G PGTGKT+ + + + L GPD Sbjct: 73 VLIAGQPGTGKTAIAMGMAQAL-GPD 97 >6HE9-H nrPDB Length = 390 Score = 46.0 bits (107), Expect = 3e-05, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 65/184 (35%), Gaps = 34/184 (18%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 +L YGPPGTGKT A+ + ++ + + S V++ + ARL V + Sbjct: 170 VLLYGPPGTGKTLLAKAVA------NQTRATFIRVVGS-----EFVQKYIGEGARL-VRE 217 Query: 121 PSKHDLENYPCPPYKIIILDEADSM--------TADAQSALRRTMET--------YSGVT 164 + E P II +DE D++ T+ + R M+ G Sbjct: 218 VFQLAKEKAPS----IIFIDELDAIAARRTNSDTSGDREVQRTMMQLLAELDGFDPRGDV 273 Query: 165 RFCLICNYVTRIIDPLASRCSKFRFKALDASNAIDRLRFISEQ-ENVKCDDGV-LERILD 222 + N + + + R + R++ +K + V + + Sbjct: 274 KVIGATNRIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKELAR 333 Query: 223 ISAG 226 I+ G Sbjct: 334 ITEG 337 >5VHO-B nrPDB Length = 267 Score = 46.0 bits (107), Expect = 3e-05, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 82/229 (35%), Gaps = 51/229 (22%) Query: 28 VEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPH--------------MLFYGPPGTGKTS 73 VEK + ++ D+ + +K++++ L H ++ YGPPGTGKT Sbjct: 10 VEKAPQETYADIGGLDNQIQEIKESVEL-PLTHPEYYEEMGIKPPKGVILYGPPGTGKTL 68 Query: 74 TILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPP 133 A+ + + L + S ++++ + + +L V + + E+ P Sbjct: 69 LAKAVA------NQTSATFLRVVGS-----ELIQKYLGDGPKL-VRELFRVAEEHAPS-- 114 Query: 134 YKIIILDEADSM-------TADAQSALRRTMETY---------SGVTRFCLICNYVTRII 177 I+ +DE D++ + + ++RTM G + + N + + Sbjct: 115 --IVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLD 172 Query: 178 DPLASRCSK---FRFKALDASNAIDRLRFISEQENVKCDDGVLERILDI 223 L F L R+ I DD L+ ++ Sbjct: 173 PALIRPGRIDRKIEF-PLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMA 220 >5VFP-B nrPDB Length = 389 Score = 46.0 bits (107), Expect = 3e-05, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 82/229 (35%), Gaps = 51/229 (22%) Query: 28 VEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPH--------------MLFYGPPGTGKTS 73 VEK + ++ D+ + +K++++ L H ++ YGPPGTGKT Sbjct: 125 VEKAPQETYADIGGLDNQIQEIKESVEL-PLTHPEYYEEMGIKPPKGVILYGPPGTGKTL 183 Query: 74 TILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPP 133 A+ + + L + S ++++ + + +L V + + E+ P Sbjct: 184 LAKAVA------NQTSATFLRVVGS-----ELIQKYLGDGPKL-VRELFRVAEEHAPS-- 229 Query: 134 YKIIILDEADSM-------TADAQSALRRTMETY---------SGVTRFCLICNYVTRII 177 I+ +DE D++ + + ++RTM G + + N + + Sbjct: 230 --IVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLD 287 Query: 178 DPLASRCSK---FRFKALDASNAIDRLRFISEQENVKCDDGVLERILDI 223 L F L R+ I DD L+ ++ Sbjct: 288 PALIRPGRIDRKIEF-PLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMA 335 >5ZQM-A nrPDB Length = 309 Score = 46.0 bits (107), Expect = 3e-05, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 60/187 (32%), Gaps = 37/187 (19%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 +L GPPGTGKT A+ E + N S + + R K Sbjct: 65 VLMVGPPGTGKTLLAKAVATE--------CKTTFFNVSS--------STLTSKYRGESEK 108 Query: 121 PSKHDLENYPCPPYKIIILDEADSM-----TADAQSALRRTMET---------------- 159 + E I +DE DS+ T++ A RR Sbjct: 109 LVRLLFEMARFYSPATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDD 168 Query: 160 YSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASNAIDRLRFISEQENVKCDDGVLER 219 S + N+ I + L R K + L ++ + L IS +E DD L Sbjct: 169 PSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRISLRELELADDVDLAS 228 Query: 220 ILDISAG 226 I + G Sbjct: 229 IAENMEG 235 >5XMK-A nrPDB Length = 437 Score = 45.6 bits (106), Expect = 3e-05, Method: Composition-based stats. Identities = 46/228 (20%), Positives = 79/228 (34%), Gaps = 48/228 (21%) Query: 3 EGFGPNKKRKISKLAAEQSLAQQPWVEKYRPKNLDEVTAQDHAVTVLKKTL-KSANLPHM 61 E G +K+ + L+++P V K+ ++V + A LK+ + PH+ Sbjct: 105 EDNGGEDNKKLRGALSSAILSEKPNV-KW-----EDVAGLEGAKEALKEAVILPVKFPHL 158 Query: 62 -----------LFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKV 110 L YGPPGTGK+ A+ E S +++SD +V + + Sbjct: 159 FKGNRKPTSGILLYGPPGTGKSYLAKAVATE------ANSTFFSVSSSD-----LVSKWM 207 Query: 111 KNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTA----DAQSALRRTMETY------ 160 + V + EN P II +D+ D++T A RR Sbjct: 208 GE-SEKLVKQLFAMARENKPS----IIFIDQVDALTGTRGEGESEASRRIKTELLVQMNG 262 Query: 161 ----SGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASNAIDRLRFI 204 S N ++ + R + + L A + I Sbjct: 263 VGNDSQGVLVLGATNIPWQLDSAIRRRFERRIYIPLPDLAARTTMFEI 310 >6EF0-H nrPDB Length = 257 Score = 45.6 bits (106), Expect = 3e-05, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 54/174 (31%), Gaps = 32/174 (18%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 +L YGPPGTGKT A+ + + + + S +V++ V AR+ V + Sbjct: 46 ILLYGPPGTGKTLCARAVA------NRTDATFIRVIGS-----ELVQKYVGEGARM-VRE 93 Query: 121 PSKHDLENYPCPPYKIIILDEADSM-------TADAQSALRRTMET---------YSGVT 164 + C II DE D++ A + ++RTM G Sbjct: 94 LFEMARTKKAC----IIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNI 149 Query: 165 RFCLICNYVTRIIDPLASRCSKFRFKALDASNAIDRLRFISEQENVKCDDGVLE 218 + N + L R + R + + Sbjct: 150 KVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIFRIHSKSMSVERGIR 203 >3PXI-A nrPDB Length = 758 Score = 45.6 bits (106), Expect = 3e-05, Method: Composition-based stats. Identities = 29/198 (14%), Positives = 62/198 (31%), Gaps = 20/198 (10%) Query: 35 NLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILE 94 +LD V + + + + L + + G PG GKT+ L +++ ++ Sbjct: 178 SLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVP------ 231 Query: 95 LNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALR 154 R ++ + R K ++ I+ +D A DA + L+ Sbjct: 232 ---EILRDKRVMTLDMGTKYRGEFEDRLKKVMDEIRQAGNIILFIDAA----IDASNILK 284 Query: 155 RTMETYSGVTRFCLICNYVTRIID---PLASRCSKFRFKALDASNAIDRLRF----ISEQ 207 ++ + + I+ L R + +I L+ Sbjct: 285 PSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIQVDQPSVDESIQILQGLRDRYEAH 344 Query: 208 ENVKCDDGVLERILDISA 225 V D +E + +S Sbjct: 345 HRVSITDDAIEAAVKLSD 362 Score = 38.3 bits (87), Expect = 0.006, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 39/104 (37%), Gaps = 17/104 (16%) Query: 55 SANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFA 114 + +F GP G GKT AL + ++G + S++R + + Sbjct: 518 KRPIGSFIFLGPTGVGKTELARALAESIFGDEE----------------SMIRIDMSEYM 561 Query: 115 RLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTME 158 + + E PY +++LD + D + L + +E Sbjct: 562 EKHSTSGGQ-LTEKVRRKPYSVVLLDAIEKAHPDVFNILLQVLE 604 >3PXG-A nrPDB Length = 468 Score = 45.6 bits (106), Expect = 4e-05, Method: Composition-based stats. Identities = 29/198 (14%), Positives = 62/198 (31%), Gaps = 20/198 (10%) Query: 35 NLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILE 94 +LD V + + + + L + + G PG GKT+ L +++ ++ Sbjct: 178 SLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVP------ 231 Query: 95 LNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALR 154 R ++ + R K ++ I+ +D A DA + L+ Sbjct: 232 ---EILRDKRVMTLDMGTKYRGEFEDRLKKVMDEIRQAGNIILFIDAA----IDASNILK 284 Query: 155 RTMETYSGVTRFCLICNYVTRIID---PLASRCSKFRFKALDASNAIDRLRF----ISEQ 207 ++ + + I+ L R + +I L+ Sbjct: 285 PSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIQVDQPSVDESIQILQGLRDRYEAH 344 Query: 208 ENVKCDDGVLERILDISA 225 V D +E + +S Sbjct: 345 HRVSITDDAIEAAVKLSD 362 >3SC3-A nrPDB Length = 225 Score = 45.6 bits (106), Expect = 4e-05, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 74/231 (32%), Gaps = 36/231 (15%) Query: 41 AQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDE 100 D + LK + + +GP +G+T I A ++ LE Sbjct: 18 GNDELIGALKSAASGDGVQAIYLWGPVKSGRTHLIHAAC--------ARANELE------ 63 Query: 101 RGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADA------QSALR 154 R + + + + + + +I +D+ D++ Sbjct: 64 RRSFYIPLGIHASISTALLEGLEQ---------FDLICIDDVDAVAGHPLWEEAIFDLYN 114 Query: 155 RTMETYSGVTRFCLICNYVTR--IIDPLASRC---SKFRFKALDASNAIDRLRFISEQEN 209 R E G + + ++ L SR ++ + + + L+ + Sbjct: 115 RVAEQKRGSLIVSASASPMEAGFVLPDLVSRMHWGLTYQLQPMMDDEKLAALQRRAAMRG 174 Query: 210 VKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNITSTQVEELA 260 ++ + V +L+ A DLR +L K + + +T V+E+ Sbjct: 175 LQLPEDVGRFLLNRMARDLRTLFDVLDRLDKASMVH--QRKLTIPFVKEML 223 >5KWA-A nrPDB Length = 497 Score = 45.2 bits (105), Expect = 4e-05, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 53/171 (30%), Gaps = 28/171 (16%) Query: 61 MLFYGPPGTGKTSTILALTK-------ELYGPDLMKSRILELNASDERGISIVREKVKNF 113 +L YGPPG GKT A+ E+ G D +++ LN ++ + + Sbjct: 184 VLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVGETERH 243 Query: 114 ARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYS------------ 161 RL + + E P I+ DE DS+ + + +ET Sbjct: 244 IRLIFQRAREKASEGTPV----IVFFDEMDSIFRTRGTGVSSDVETTVVPQLLSEIDGVE 299 Query: 162 --GVTRFCLICNYVTRIIDPLASRCSK---FRFKALDASNAIDRLRFISEQ 207 N I + + + DA A D + Sbjct: 300 GLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQDIYSKYLTE 350 >2ZAO-A nrPDB Length = 444 Score = 45.2 bits (105), Expect = 5e-05, Method: Composition-based stats. Identities = 59/363 (16%), Positives = 115/363 (31%), Gaps = 48/363 (13%) Query: 7 PNKKRKISKLAAEQSLAQQPWVEKYRPKNLDEVTAQDHAVTVLKKTL-KSANLPHM---- 61 P KK+ ++L + ++P V K+ +V + A LK+ + PH+ Sbjct: 111 PEKKKLQNQLQGAI-VIERPNV-KW-----SDVAGLEGAKEALKEAVILPIKFPHLFTGK 163 Query: 62 -------LFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFA 114 L +GPPGTGK+ A+ E S +++SD +V + + + Sbjct: 164 RTPWRGILLFGPPGTGKSYLAKAVATE-----ANNSTFFSISSSD-----LVSKWLGE-S 212 Query: 115 RLTVSKPSKHDLENYPCPPYKIIILDEADSM----TADAQSALRRTMETYSGVTRFCLIC 170 V + EN P II +DE DS+ + + A RR + + + Sbjct: 213 EKLVKNLFQLARENKPS----IIFIDEIDSLCGSRSENESEAARRIKTEFLVQMQGVGVD 268 Query: 171 NYVTRIIDPLASRCSKFRFKALDASNAIDRLRFISEQENVKCDDGVLERILDISAGDLRR 230 N ++ + S R + + + G + Sbjct: 269 NDGILVLGAT-------NIPWVLDSAIRRRFEKRIY--IPLPEAHARAAMFRLHLGSTQN 319 Query: 231 GITLLQSASKGAQYLG-DGKNITSTQVEELAGVVPHDILIEIVEKVKSGDFDEIKKYVNT 289 +T G + G G +I+ + L V +KV+ + VN Sbjct: 320 SLTEADFQELGRKTDGYSGADISIIVRDALMQPVRKVQSATHFKKVRGPSRADPNCIVND 379 Query: 290 FMKSGWSAASVVNQLHEYYITNDNFDTNFKNQISWLLFTTDSRLNNGTNEHIQLLNLLVK 349 + ++ + D + L + ++ + ++L Sbjct: 380 LLTPCSPGDPGAIEMTWMDVPGDKLLEPVVSMWDMLRSLSSTKPTVNEQDLLKLKKFTED 439 Query: 350 ISQ 352 Q Sbjct: 440 FGQ 442 >6CHS-H nrPDB Length = 819 Score = 45.2 bits (105), Expect = 5e-05, Method: Composition-based stats. Identities = 48/232 (20%), Positives = 76/232 (32%), Gaps = 50/232 (21%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 +L YGPPGTGKT A+ E + +N + + K+ + + K Sbjct: 257 VLLYGPPGTGKTLMARAVANE------TGAFFFLINGPE------IMSKMAGESESNLRK 304 Query: 121 PSKHDLENYPCPPYKIIILDEADSMTADAQ-----------SALRRTME--TYSGVTRFC 167 + +N P II +DE DS+ + S L M+ Sbjct: 305 AFEEAEKNSPA----IIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGMKARSNVVVM 360 Query: 168 LICNYVTRIIDPLASRCSKFRFKALDAS------NAIDRLRFISEQ-ENVKCDDGV-LER 219 N I L RF D + RL + +N+K D V LE+ Sbjct: 361 AATNRPNSIDPALR------RFGRFDREVDIGIPDPTGRLEILQIHTKNMKLADDVDLEQ 414 Query: 220 ILDISAGDLRRGITLLQSASKGAQ-------YLGDGKNITSTQVEELAGVVP 264 I + G + + L S + Q D I + ++ L + Sbjct: 415 IAAETHGYVGSDLAALCSEAAMQQIREKMDLIDLDEDTIDAEVLDSLGVTMD 466 Score = 43.3 bits (100), Expect = 1e-04, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 83/279 (29%), Gaps = 42/279 (15%) Query: 43 DHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERG 102 DH LK L + +LFYGPPGTGKT A+ E N +G Sbjct: 515 DHPEKFLKFGLSPSR--GVLFYGPPGTGKTMLAKAVANE-----------CAANFISVKG 561 Query: 103 ISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTA-------DAQSALRR 155 ++ + + PC ++ LDE DS+ DA A R Sbjct: 562 PELLSMWFGE-SESNIRDIFDKARAAAPC----VVFLDELDSIAKARGGSIGDAGGASDR 616 Query: 156 TME---------TYSGVTRFCLICNYVTRIIDPLAS--RCSKFRFKALDASNAIDRLRFI 204 + T N ++ L R + + L + Sbjct: 617 VVNQLLTEMDGMTSKKNVFVIGATNRPEQLDPALCRPGRLDQLIYVPLPDEAGRLSILKA 676 Query: 205 SEQENVKCDDGVLERILDISAG-DLRRGITLLQSASKGAQYLGDGKNITSTQVEELAG-- 261 ++ D L I + G + Q A K A I + E AG Sbjct: 677 QLRKTPVSKDVDLAYIASKTHGFSGADLAFITQRAVKLAIKESIAAEIERQKAREAAGED 736 Query: 262 ---VVPHDILIEIVEKVKSGDFDEIKKYVNTFMKSGWSA 297 D + E+ ++ + ++ V+ + A Sbjct: 737 VNMEDDEDPVPELTKRHFEEAMRDARRSVSDVEIRRYEA 775 >6EF3-H nrPDB Length = 467 Score = 44.8 bits (104), Expect = 5e-05, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 54/174 (31%), Gaps = 32/174 (18%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 +L YGPPGTGKT A+ + + + + S +V++ V AR+ V + Sbjct: 246 ILLYGPPGTGKTLCARAVA------NRTDATFIRVIGS-----ELVQKYVGEGARM-VRE 293 Query: 121 PSKHDLENYPCPPYKIIILDEADSM-------TADAQSALRRTMET---------YSGVT 164 + C II DE D++ A + ++RTM G Sbjct: 294 LFEMARTKKAC----IIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNI 349 Query: 165 RFCLICNYVTRIIDPLASRCSKFRFKALDASNAIDRLRFISEQENVKCDDGVLE 218 + N + L R + R + + Sbjct: 350 KVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIFRIHSKSMSVERGIR 403 >5T0C-AD nrPDB Length = 418 Score = 44.8 bits (104), Expect = 5e-05, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 56/181 (30%), Gaps = 35/181 (19%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 +L YGPPG GKT A+ + + + S V++ + R+ V Sbjct: 202 VLMYGPPGCGKTMLAKAVAH------HTTAAFIRVVGS-----EFVQKYLGEGPRM-VRD 249 Query: 121 PSKHDLENYPCPPYKIIILDEADSMTADAQSA--------------LRRTMETYSG--VT 164 + EN P II +DE D++ A L M+ + Sbjct: 250 VFRLAKENAPA----IIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNV 305 Query: 165 RFCLICNYVTRIIDPLASRCSK---FRFKALDASNAIDRLRFISEQENVKCDDGVLERIL 221 + + N + L F D I+ + N+ + + + + Sbjct: 306 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVA 365 Query: 222 D 222 Sbjct: 366 R 366 >5W0T-A nrPDB Length = 304 Score = 44.4 bits (103), Expect = 7e-05, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 63/180 (35%), Gaps = 30/180 (16%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 +L YGPPG GKT AL KE G + + R+ S + +K + V Sbjct: 80 VLLYGPPGCGKTMLAKALAKE-SGANFISIRM-----------SSIMDKWYGESNKIVDA 127 Query: 121 PSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYS-------------GVTRFC 167 + PC II +DE DS + S T G Sbjct: 128 MFSLANKLQPC----IIFIDEIDSFLRERSSTDHEVTATLKAEFMTLWDGLLNNGRVMII 183 Query: 168 LICNYVTRIIDPLASRCSKFRFKALDASNAIDRLRFISEQE-NVKCDDGVLERILDISAG 226 N + I D R K +L S+ ++ + ++ + D+ L+ I D + G Sbjct: 184 GATNRINDIDDAFLRRLPKRFLVSLPGSDQRYKILSVLLKDTKLDEDEFDLQLIADNTKG 243 >5VHO-A nrPDB Length = 267 Score = 44.4 bits (103), Expect = 7e-05, Method: Composition-based stats. Identities = 33/193 (17%), Positives = 62/193 (32%), Gaps = 48/193 (24%) Query: 35 NLDEVTAQDHAVTVLKKTLKSANLP-------------HMLFYGPPGTGKTSTILALTKE 81 +V + L++ +++ L +L +GPPGTGKT A+ Sbjct: 16 TYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVA-- 73 Query: 82 LYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDE 141 + + + + S +V++ V AR+ V + + C +I DE Sbjct: 74 ----NRTDACFIRVIGS-----ELVQKYVGEGARM-VRELFEMARTKKAC----LIFFDE 119 Query: 142 ADSM-------TADAQSALRRTMET---------YSGVTRFCLICNYVTRIIDPLASRCS 185 D++ A + ++RTM G + + N + L Sbjct: 120 IDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGR 179 Query: 186 K---FRFKALDAS 195 F D Sbjct: 180 LDRKIEFSLPDLE 192 >4ZPX-A nrPDB Length = 413 Score = 44.4 bits (103), Expect = 8e-05, Method: Composition-based stats. Identities = 33/137 (24%), Positives = 56/137 (40%), Gaps = 7/137 (5%) Query: 3 EGFGPNKKRKISKLAAEQSLAQQPWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHML 62 E P + + +L E + ++ V + K +D+V Q+HAV V+K H+L Sbjct: 10 EALAPREYGESLELGIEFTTTEEIEVPE---KLIDQVIGQEHAVEVIKTAANQKR--HVL 64 Query: 63 FYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPS 122 G PGTGK+ A+ EL + ++ ++ N DE I R V K Sbjct: 65 LIGEPGTGKSMLGQAMA-ELLPTETLEDILVFPNPEDENMPRIKTVPACQ-GRRIVEKYR 122 Query: 123 KHDLENYPCPPYKIIIL 139 + Y ++ + Sbjct: 123 EKAKSQESVKSYILLFV 139 >5VFU-A nrPDB Length = 361 Score = 44.4 bits (103), Expect = 8e-05, Method: Composition-based stats. Identities = 33/193 (17%), Positives = 62/193 (32%), Gaps = 48/193 (24%) Query: 35 NLDEVTAQDHAVTVLKKTLKSANLP-------------HMLFYGPPGTGKTSTILALTKE 81 +V + L++ +++ L +L +GPPGTGKT A+ Sbjct: 101 TYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVA-- 158 Query: 82 LYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDE 141 + + + + S +V++ V AR+ V + + C +I DE Sbjct: 159 ----NRTDACFIRVIGS-----ELVQKYVGEGARM-VRELFEMARTKKAC----LIFFDE 204 Query: 142 ADSM-------TADAQSALRRTMET---------YSGVTRFCLICNYVTRIIDPLASRCS 185 D++ A + ++RTM G + + N + L Sbjct: 205 IDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGR 264 Query: 186 K---FRFKALDAS 195 F D Sbjct: 265 LDRKIEFSLPDLE 277 >3J3U-A nrPDB Length = 810 Score = 44.0 bits (102), Expect = 1e-04, Method: Composition-based stats. Identities = 31/208 (14%), Positives = 69/208 (33%), Gaps = 23/208 (11%) Query: 35 NLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILE 94 +LD V + + + + L + + G PG GKT+ L +++ + + + E Sbjct: 178 SLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQI-----INNEVPE 232 Query: 95 LNASDERGISIVREKV--KNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTA----- 147 + D+R +++ V R K ++ I+ +D ++ Sbjct: 233 ILR-DKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDALHTLIGAGGAE 291 Query: 148 ---DAQSALRRTMETYSGVTRFCLICNYVTRIID---PLASRCSKFRFKALDASNAIDRL 201 DA + L+ ++ + + I+ L R + +I L Sbjct: 292 GAIDASNILKPSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIQVDQPSVDESIQIL 351 Query: 202 RF----ISEQENVKCDDGVLERILDISA 225 + V D +E + +S Sbjct: 352 QGLRDRYEAHHRVSITDDAIEAAVKLSD 379 Score = 38.7 bits (88), Expect = 0.004, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 39/104 (37%), Gaps = 3/104 (2%) Query: 55 SANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFA 114 + +F GP G GKT AL + ++G + ++ ++ S+ V + Sbjct: 535 KRPIGSFIFLGPTGVGKTELARALAESIFGD---EESMIRIDMSEYMEKHSTSRLVGSPP 591 Query: 115 RLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTME 158 E PY +++LD + D + L + +E Sbjct: 592 GYVGYDEGGQLTEKVRRKPYSVVLLDAIEKAHPDVFNILLQVLE 635 >3CF0-A nrPDB Length = 301 Score = 43.7 bits (101), Expect = 1e-04, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 64/202 (31%), Gaps = 36/202 (17%) Query: 43 DHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERG 102 +H LK + + +LFYGPPG GKT A+ E + N +G Sbjct: 36 EHPDKFLKFGMTPSK--GVLFYGPPGCGKTLLAKAIANE-----------CQANFISIKG 82 Query: 103 ISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQ------------ 150 ++ + V + + PC ++ DE DS+ Sbjct: 83 PELLTMWFGE-SEANVREIFDKARQAAPC----VLFFDELDSIAKARGGNIGDGGGAADR 137 Query: 151 --SALRRTMETYS--GVTRFCLICNYVTRIIDPLAS--RCSKFRFKALDASNAIDRLRFI 204 + + M+ S N I + R + + L + + Sbjct: 138 VINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKA 197 Query: 205 SEQENVKCDDGVLERILDISAG 226 + +++ D LE + ++ G Sbjct: 198 NLRKSPVAKDVDLEFLAKMTNG 219 >3HU1-A nrPDB Length = 489 Score = 43.3 bits (100), Expect = 2e-04, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 84/259 (32%), Gaps = 49/259 (18%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 +L YGPPGTGKT A+ E + +N + + K+ + + K Sbjct: 241 ILLYGPPGTGKTLIARAVANE------TGAFFFLINGPE------IMSKLAGESESNLRK 288 Query: 121 PSKHDLENYPCPPYKIIILDEADSMTADAQ-----------SALRRTMETYSGVTRFCL- 168 + +N P II +DE D++ + S L M+ + Sbjct: 289 AFEEAEKNAPA----IIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVM 344 Query: 169 -ICNYVTRIIDPLASRCSKFRFKALDAS------NAIDRLRFISEQ-ENVKCDDGV-LER 219 N I L RF D +A RL + +N+K D V LE+ Sbjct: 345 AATNRPNSIDPALR------RFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQ 398 Query: 220 ILDISAGDLRRGI------TLLQSASKGAQYLGDGKNITSTQVEELAGVVPHDILIEIVE 273 + + + G + + LQ+ K + +V V D + + Sbjct: 399 VANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQ 458 Query: 274 KVKSGDFDEIKKYVNTFMK 292 S + + + + Sbjct: 459 SNPSALRETVVEVPQVTWE 477 >6EMW-E nrPDB Length = 181 Score = 43.3 bits (100), Expect = 2e-04, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 10/123 (8%) Query: 35 NLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILE 94 LD V +D +T + + L + + G PG GKT+ L + + + + Sbjct: 17 TLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIV------NNEVP 70 Query: 95 LNASDERGISIVREKV--KNFARLTVSKPSKHDLENYPCPPYKIIILDEADSM--TADAQ 150 D+R +S+ V R + K +E I+ +DE ++ A+ Sbjct: 71 ETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGNVILFIDELHTLVGAGGAE 130 Query: 151 SAL 153 A+ Sbjct: 131 GAI 133 >4YPN-A nrPDB Length = 293 Score = 42.9 bits (99), Expect = 2e-04, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 65/208 (31%), Gaps = 48/208 (23%) Query: 22 LAQQPWVEKYRPKNLD----------EVTAQDHAVTVLKKTLKSANL----------PHM 61 L + PW K P+ LD + + + L L P + Sbjct: 88 LTEVPW-SKADPEVLDINHTRQVLDEDHYGLKDVKERILEYLAVRQLTQGLDVRNKAPIL 146 Query: 62 LFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKP 121 + GPPG GKTS ++ + M + ++ R + +R + + K Sbjct: 147 VLVGPPGVGKTSLGRSIARS------MNRKFHRISLGGVRDEAEIRGHRRTYIGAMPGKL 200 Query: 122 SKHDLENYPCPPYKIIILDEADSMTADAQS----ALRRTMETYSGVT------------- 164 + P +I+LDE D M++D + A+ ++ T Sbjct: 201 IHAMKQVGVINP--VILLDEIDKMSSDWRGDPASAMLEVLDPEQNNTFTDHYLDVPYDLS 258 Query: 165 --RFCLICNYVTRIIDPLASRCSKFRFK 190 F N + I PL R Sbjct: 259 KVFFITTANTLQTIPRPLLDRMEVIEIP 286 >6EPC-H nrPDB Length = 433 Score = 42.9 bits (99), Expect = 2e-04, Method: Composition-based stats. Identities = 33/193 (17%), Positives = 62/193 (32%), Gaps = 48/193 (24%) Query: 35 NLDEVTAQDHAVTVLKKTLKSANLP-------------HMLFYGPPGTGKTSTILALTKE 81 +V + L++ +++ L +L +GPPGTGKT A+ Sbjct: 173 TYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVA-- 230 Query: 82 LYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDE 141 + + + + S +V++ V AR+ V + + C +I DE Sbjct: 231 ----NRTDACFIPVIGS-----ELVQKYVGEGARM-VRELFEMARTKKAC----LIFFDE 276 Query: 142 ADSM-------TADAQSALRRTMET---------YSGVTRFCLICNYVTRIIDPLASRCS 185 D++ A + ++RTM G + + N + L Sbjct: 277 IDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGR 336 Query: 186 K---FRFKALDAS 195 F D Sbjct: 337 LDRKIEFSLPDLE 349 >3K1J-A nrPDB Length = 604 Score = 42.9 bits (99), Expect = 2e-04, Method: Composition-based stats. Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 6/98 (6%) Query: 3 EGFGPNKKRKISKLAAEQSLAQQPWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHML 62 E P + + +L E + ++ V + K +D+V Q+HAV V+K H+L Sbjct: 10 EALAPREYGESLELGIEFTTTEEIEVPE---KLIDQVIGQEHAVEVIKTAANQKR--HVL 64 Query: 63 FYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDE 100 G PGTGK+ A+ EL + ++ ++ N DE Sbjct: 65 LIGEPGTGKSMLGQAMA-ELLPTETLEDILVFPNPEDE 101 >2Z4R-A nrPDB Length = 440 Score = 42.9 bits (99), Expect = 2e-04, Method: Composition-based stats. Identities = 42/240 (17%), Positives = 80/240 (33%), Gaps = 23/240 (9%) Query: 2 FEGFGPNKKRKISKLAAEQSLAQQPWVEKYRPKNLDEVTAQDHAV-TVLKKTLKSANLPH 60 +E F P+ L ++++ P Y +N A L+ Sbjct: 74 YEAFEPHSSYS-EPLVKKRAVLLTPLNPDYTFENFVVGPGNSFAYHAALEVAKHPGRYNP 132 Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 + YG G GKT + ++ + N D R + I EK N ++ + Sbjct: 133 LFIYGGVGLGKTHLLQSI-----------GNYVVQNEPDLRVMYITSEKFLNDLVDSMKE 181 Query: 121 PSKHDLENYPCPPYKIIILDEADSMTA--DAQSALRRTMETYSGVTRFCLICNYV----- 173 ++ I+++D+ + Q+ L T + +IC+ Sbjct: 182 GKLNEFREKYRKKVDILLIDDVQFLIGKTGVQTELFHTFNELHDSGKQIVICSDREPQKL 241 Query: 174 TRIIDPLASR---CSKFRFKALDASNAIDRLRFISEQENVKCDDGVLERILDISAGDLRR 230 + D L SR + + D R + E E+ + + VL + + +LRR Sbjct: 242 SEFQDRLVSRFQMGLVAKLEPPDEETRKSIARKMLEIEHGELPEEVLNFVAENVDDNLRR 301 >6MDP-A nrPDB Length = 768 Score = 42.9 bits (99), Expect = 2e-04, Method: Composition-based stats. Identities = 45/302 (14%), Positives = 87/302 (28%), Gaps = 39/302 (12%) Query: 56 ANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFAR 115 ++ +L YGPPG GKT + K L + E+ ++ + + R Sbjct: 275 KHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEI-------LNKYVGESEANIR 327 Query: 116 LTVSKPSKHDLENYPCPPYKIIILDEADSMTADA-------------QSALRRTME--TY 160 + + III DE D++ + L ++ Sbjct: 328 KLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQ 387 Query: 161 SGVTRFCLICNYVTRIIDPLAS--RCSKFRFKALDASNAIDRLRFI-----SEQENVKCD 213 + N I + L R L ++ I + + D Sbjct: 388 LNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSAD 447 Query: 214 DGVLERILDI---SAGDLRRGITLLQSASKGAQYLGDGKNITSTQVEELAGVVPHDILIE 270 + E ++ S +L + QS + + K + E V D L Sbjct: 448 VDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIIASTKVEVDMEKAESLQVTRGDFLAS 507 Query: 271 IVEKVK----SGDFDEIKKYVNTFMKSGWSAASVVNQLHEYYITNDNFDTNFKNQISWLL 326 + +K + D +N +K G V L + + + + + +L Sbjct: 508 LENDIKPAFGTNQEDYASYIMNGIIKWGDP---VTRVLDDGELLVQQTKNSDRTPLVSVL 564 Query: 327 FT 328 Sbjct: 565 LE 566 Score = 29.4 bits (64), Expect = 2.7, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 34/88 (38%), Gaps = 15/88 (17%) Query: 58 LPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLT 117 L +L GPP +GKT+ + +E +++ + D K+ F+ Sbjct: 560 LVSVLLEGPPHSGKTALAAKIAEE------SNFPFIKICSPD---------KMIGFSETA 604 Query: 118 VSKPSKHDLENYPCPPYKIIILDEADSM 145 + K ++ +++D+ + + Sbjct: 605 KCQAMKKIFDDAYKSQLSCVVVDDIERL 632 >2QBY-B nrPDB Length = 384 Score = 42.9 bits (99), Expect = 2e-04, Method: Composition-based stats. Identities = 53/250 (21%), Positives = 88/250 (35%), Gaps = 26/250 (10%) Query: 62 LFYGPPGTGKTSTILALTKELYGPDLMKS----------RILELNASDERGISIVREKVK 111 LF G GTGKT + E+ E+ + + +S + K+ Sbjct: 49 LFLGLTGTGKTFVSKYIFNEIEEVKKEDEEYKDVKQAYVNCREVGGTPQAVLSSLAGKLT 108 Query: 112 NFA---RLTVSKPSKHDLENYPCPPYKIIILDEADSMTAD-AQSALRRTMETYSGVTRFC 167 F+ ++N II LDE D++ + + Sbjct: 109 GFSVPKHGINLGEYIDKIKNGTRNIRAIIYLDEVDTLVKRRGGDIVLYQLLRSDANISVI 168 Query: 168 LICNYVT--RIIDP--LASRCSKFRFKALDASNAIDRLRFISEQENVK--CDDGVLERIL 221 +I N + ++P L+S FK DA L +E +K DD +L I Sbjct: 169 MISNDINVRDYMEPRVLSSLGPSVIFKPYDAEQLKFILSKYAEYGLIKGTYDDEILSYIA 228 Query: 222 DISA---GDLRRGITLLQSASKGAQYLGDGKNITSTQVEELAGVVPHDILIEIVEKVKSG 278 ISA GD R+ + LL A++ A G I V++ + LIE V+ + Sbjct: 229 AISAKEHGDARKAVNLLFRAAQLASGGGI---IRKEHVDKAIVDYEQERLIEAVKALPFH 285 Query: 279 DFDEIKKYVN 288 ++ + Sbjct: 286 YKLALRSLIE 295 >3M6A-A nrPDB Length = 543 Score = 42.5 bits (98), Expect = 3e-04, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 83/246 (33%), Gaps = 50/246 (20%) Query: 8 NKKRKISKLAAEQSLAQ--------QPWVE--------KYRPKNLDE-VTAQDHAVTVLK 50 N+ KI +AE S+ + PW + K + LDE + + Sbjct: 35 NRYEKIPSSSAESSVIRNYIDWLVALPWTDETDDKLDLKEAGRLLDEEHHGLEKVKERIL 94 Query: 51 KTLKSANL------PHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGIS 104 + L L P + GPPG GKTS ++ K L + + ++ R S Sbjct: 95 EYLAVQKLTKSLKGPILCLAGPPGVGKTSLAKSIAKSL------GRKFVRISLGGVRDES 148 Query: 105 IVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQS----ALRRTME-- 158 +R + + + + + P + +LDE D M++D + A+ ++ Sbjct: 149 EIRGHRRTYVGAMPGRIIQGMKKAGKLNP--VFLLDEIDKMSSDFRGDPSSAMLEVLDPE 206 Query: 159 ---TYSGV----------TRFCLICNYVTRIIDPLASRCSKFRFKALDASNAIDRLRFIS 205 ++S F N + I PL R ++ ++ Sbjct: 207 QNSSFSDHYIEETFDLSKVLFIATANNLATIPGPLRDRMEIINIAGYTEIEKLEIVKDHL 266 Query: 206 EQENVK 211 + +K Sbjct: 267 LPKQIK 272 >1LV7-A nrPDB Length = 257 Score = 42.1 bits (97), Expect = 4e-04, Method: Composition-based stats. Identities = 28/133 (21%), Positives = 46/133 (34%), Gaps = 28/133 (21%) Query: 34 KNLDEVTAQDHAVTVLKKTLK-----------SANLPH-MLFYGPPGTGKTSTILALTKE 81 +V D A + + ++ +P +L GPPGTGKT A+ E Sbjct: 9 TTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGE 68 Query: 82 LYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDE 141 K ++ SD + + V V + + PC II +DE Sbjct: 69 ------AKVPFFTISGSDFVEMFV---GVGA---SRVRDMFEQAKKAAPC----IIFIDE 112 Query: 142 ADSMTADAQSALR 154 D++ + L Sbjct: 113 IDAVGRQRGAGLG 125 >5D4W-A nrPDB Length = 926 Score = 42.1 bits (97), Expect = 4e-04, Method: Composition-based stats. Identities = 32/196 (16%), Positives = 63/196 (32%), Gaps = 21/196 (10%) Query: 32 RPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSR 91 R +D V ++ + + + L + + G PG GKT+ + L + + D+ Sbjct: 190 REGKIDPVIGREEEIRRVIRILSRRTKNNPVLIGEPGVGKTTIVEGLAQRIVNADVPD-- 247 Query: 92 ILELNASDERGISIVREKVKNFA--RLTVSKPSKHDLENYPCPPYKII-ILDEADSMTA- 147 N + + +S+ + + R + K L+ II +D + Sbjct: 248 ----NLAACKLLSLDVGALVAGSKYRGEFEERMKGVLKEIQESKETIILFVDAIHLLMGA 303 Query: 148 --------DAQSALRRTMETYSGVTRFCLICNYVTRIID---PLASRCSKFRFKALDASN 196 DA + L+ + + I+ R + K S Sbjct: 304 GSSGEGGMDAANLLKPMLARGQLHCIGATTLAEYRKYIEKDAAFERRFQQVLVKEPSISE 363 Query: 197 AIDRLRFISEQENVKC 212 I LR + E+ V Sbjct: 364 TISILRGLKEKYEVHH 379 Score = 42.1 bits (97), Expect = 4e-04, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 44/128 (34%), Gaps = 11/128 (8%) Query: 39 VTAQDHAVTVLKKTLK--------SANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKS 90 V Q AV + ++ P LF GP GTGKT AL + L+ Sbjct: 600 VVGQKEAVQSVSNAIRLQRSGLSNPNQPPSFLFCGPSGTGKTLLTKALAEFLFDD---PK 656 Query: 91 RILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQ 150 ++ + S+ + + + E P+ I++ D + + Sbjct: 657 SMIRFDMSEYQERHSLSRMIGAPPGYVGHDAGGQLTEALRRRPFSILLFDAVEKAAKEVL 716 Query: 151 SALRRTME 158 + L + M+ Sbjct: 717 TVLLQLMD 724 >6E11-1 nrPDB Length = 906 Score = 41.7 bits (96), Expect = 4e-04, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 44/128 (34%), Gaps = 12/128 (9%) Query: 39 VTAQDHAVTVLKKTLKSAN---------LPHMLFYGPPGTGKTSTILALTKELYGPDLMK 89 + + + L + A + LF GP G GKT L EL+ K Sbjct: 603 IIGNEDIIKSLSDAVVKAATGMKDPEKPIGTFLFLGPTGVGKTELAKTLAIELFN---SK 659 Query: 90 SRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADA 149 ++ +N S+ V + + S E P+ +++ DE + AD Sbjct: 660 DNLIRVNMSEFTEAHSVSKITGSPPGYVGFSDSGQLTEAVREKPHSVVLFDELEKAHADV 719 Query: 150 QSALRRTM 157 L + + Sbjct: 720 FKVLLQIL 727 Score = 40.2 bits (92), Expect = 0.001, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 79/245 (32%), Gaps = 30/245 (12%) Query: 29 EKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLM 88 EK R L + +D + + ++L N + G PGTGKT+ + L + D+ Sbjct: 199 EKVRNGKLQGIYGRDEEIRAIIESLLRYNKNSPVLVGNPGTGKTTIVEGLVYRIEKGDVP 258 Query: 89 KSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKII-ILDEADSMTA 147 K EL ++ + R K+ ++ KII +DE + Sbjct: 259 K----ELQGYTVISLNFRKFTSGTSYRGEFETRMKNIIKELKNKKNKIILFVDEIHLLLG 314 Query: 148 --------DAQSALRRTMETYSGVTRFCLICN--YVTRIID---PLASRCSKFRFKALDA 194 DA + L+ + G + + I+ R K + Sbjct: 315 AGKAEGGTDAANLLKPVLS--KGEIKLIGATTIAEYRKFIESCSAFERRFEKILVEPPSV 372 Query: 195 SNAIDRLRFISEQ----ENVKCDDGVLERILDISAGDLR------RGITLLQSASKGAQY 244 + LR + + + D L IS ++ + I LL A Q Sbjct: 373 DMTVKILRSLKSKYENFYGINITDKALVAAAKISDRFIKDRYLPDKAIDLLNKACSFLQV 432 Query: 245 LGDGK 249 GK Sbjct: 433 QLSGK 437 >6GEJ-U nrPDB Length = 471 Score = 41.7 bits (96), Expect = 4e-04, Method: Composition-based stats. Identities = 26/182 (14%), Positives = 53/182 (29%), Gaps = 22/182 (12%) Query: 71 KTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYP 130 KT E+ + L L D I R +V++ V++ + Sbjct: 233 KTVVHTVSLHEIDVINSRTQGFLALFTGDTGEI---RSEVRDQINTKVAEWKEEGKAEIV 289 Query: 131 CPPYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNY-------------VTRII 177 ++ +DE + + S + R +E ++ + Sbjct: 290 PG---VLFIDEVHMLDIECFSFINRALE--DEFAPIVMMATNRGVSKTRGTNYKSPHGLP 344 Query: 178 DPLASRCSKFRFKALDASNAIDRLRFISEQENVKCDDGVLERILDI-SAGDLRRGITLLQ 236 L R K+ + L +++E V+ L+ + LR L+ Sbjct: 345 LDLLDRSIIITTKSYNEQEIKTILSIRAQEEEVELSSDALDLLTKTGVETSLRYSSNLIS 404 Query: 237 SA 238 A Sbjct: 405 VA 406 Score = 29.8 bits (65), Expect = 1.9, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 34/80 (42%), Gaps = 10/80 (12%) Query: 11 RKISKLAAEQSLAQQPWVEKYRPKNLDE-VTAQDH-------AVTVLKKTLKSANLPHML 62 + +S +AA + E +P+ E + Q + +++ + +L Sbjct: 15 KSLSLIAAHSHITGLGLDENLQPRPTSEGMVGQLQARRAAGVILKMVQNGTIAGRA--VL 72 Query: 63 FYGPPGTGKTSTILALTKEL 82 GPP TGKT+ + +++ L Sbjct: 73 VAGPPSTGKTALAMGVSQSL 92 >6GEJ-T nrPDB Length = 463 Score = 41.7 bits (96), Expect = 4e-04, Method: Composition-based stats. Identities = 25/183 (13%), Positives = 57/183 (31%), Gaps = 18/183 (9%) Query: 106 VREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTR 165 + EK++ V+K + ++ +DE + + + + L + +E+ Sbjct: 280 ITEKLRQEVNKVVAKYIDQGVAELIPG---VLFIDEVNMLDIEIFTYLNKALESNIAPV- 335 Query: 166 FCLICN-------------YVTRIIDPLASRCSKFRFKALDASNAIDRLRFISEQENVKC 212 L N + L R R D + + E ++ Sbjct: 336 VVLASNRGMTTVRGTEDVISPHGVPPDLIDRLLIVRTLPYDKDEIRTIIERRATVERLQV 395 Query: 213 DDGVLERILDI-SAGDLRRGITLLQSASKGAQYLGDGKNITSTQVEELAGVVPHDILIEI 271 + L+ + + + LR + LL AQ + + + E + +I Sbjct: 396 ESSALDLLATMGTETSLRYALQLLAPCGILAQTSNRKEIVVNDVNEAKLLFLDAKRSTKI 455 Query: 272 VEK 274 +E Sbjct: 456 LET 458 >4LJ8-A nrPDB Length = 339 Score = 41.7 bits (96), Expect = 4e-04, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 47/129 (36%), Gaps = 12/129 (9%) Query: 39 VTAQDHAVTVLKKTLKSAN---------LPHMLFYGPPGTGKTSTILALTKELYGPDLMK 89 V QD A+ + ++ A + LF GP G GKT L L+ + Sbjct: 45 VVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLF---DTE 101 Query: 90 SRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADA 149 +++++ ++ V + + E PY +I+ DE + D Sbjct: 102 EAMIQIDMTEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDV 161 Query: 150 QSALRRTME 158 + L + ++ Sbjct: 162 FNILLQILD 170 >2X8A-A nrPDB Length = 274 Score = 41.3 bits (95), Expect = 7e-04, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 64/185 (34%), Gaps = 34/185 (18%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 +L GPPG GKT A+ E LN +G ++ V R V + Sbjct: 47 VLLAGPPGCGKTLLAKAVANE-----------SGLNFISVKGPELLNMYVGESER-AVRQ 94 Query: 121 PSKHDLENYPCPPYKIIILDEADSM--------TADAQSALRRTMETYSG----VTRFCL 168 + + PC +I DE D++ T + + + + G F + Sbjct: 95 VFQRAKNSAPC----VIFFDEVDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIM 150 Query: 169 ICNYVTRIIDPLASRCSKFR----FKALDASNAIDRLRFISEQENVKCDDGVLERILDIS 224 IIDP R + ++ + L+ I++ K + L+ Sbjct: 151 AATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKN-GTKPPLDA-DVNLEAI 208 Query: 225 AGDLR 229 AGDLR Sbjct: 209 AGDLR 213 >6MAT-A nrPDB Length = 813 Score = 41.0 bits (94), Expect = 8e-04, Method: Composition-based stats. Identities = 37/280 (13%), Positives = 82/280 (29%), Gaps = 46/280 (16%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 +L +GPPG GKT A+ E K+ + + +G ++ + V R V + Sbjct: 538 ILLWGPPGCGKTLVAKAVANE------SKANFISI-----KGPELLNKYVGESER-AVRQ 585 Query: 121 PSKHDLENYPCPPYKIIILDEADSM-------TADAQSALRRTMETY------SGVTRFC 167 + PC I+ D+ D++ +DA + + T+ T Sbjct: 586 LFSRAKSSAPC----ILFFDQMDALVPRRDDSLSDASARVVNTLLTELDGVGDRSGIYVI 641 Query: 168 LICNYVTRIIDPLASRCSK---FRFKALDASNAIDRLRFISEQENVKCDDGVLERILDIS 224 N I + + A + + L+ + Sbjct: 642 GATNRPDMIDEAIRRPGRLGTSIYVGLPSAEDRVKILKTLYRNTVKAPKKR--------- 692 Query: 225 AGDLRRGITLLQSASKGAQYLGDGKNITSTQVEELAGVVPHDILIEIVEKVKSGDFDEIK 284 G + + +A++ ++ ++ L +++ + + Sbjct: 693 EGTNGEDVDMTDAAAEQQHQGTTDADLEKVALDLRCTGFSGADLGNLMQAAAQACLERVY 752 Query: 285 KYVNTFMKSGWSAA-----SVVNQLHEYYITNDNFDTNFK 319 K G S A V + ++ + + K Sbjct: 753 TQRQQKRKEGGSVAEEEEIEPVITMEDWEKALNEVKPSVK 792 Score = 40.6 bits (93), Expect = 0.001, Method: Composition-based stats. Identities = 26/173 (15%), Positives = 55/173 (31%), Gaps = 13/173 (7%) Query: 61 MLFYGPPGTGKTSTILALTKEL---YGPDLMKSRILELNASDERGISIVREKVKNFARLT 117 +L +GP G GKT+ A+ + + P S I + E+ I V ++ A Sbjct: 239 VLLHGPSGCGKTTLAHAIAGSIGVAFIPVSAPSVIGGTSGESEKNIRDVFDEAIRLAPCL 298 Query: 118 VS----KPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYV 173 + E+ I+ + + M Q+ N Sbjct: 299 IFLDQIDAIAGRRESANKGMESRIVAEIMNGMDRIRQNTPL------GKNVVVLAATNRP 352 Query: 174 TRIIDPLASRCSKFRFKALDASNAIDRLRFISEQENVKCDDGVLERILDISAG 226 + + R S + + A +++ ++ DD + + ++ G Sbjct: 353 EFLDPAIRRRFSVEIDMGMPSERAREQILRSLTRDLSLADDINFKELAKMTPG 405 >1R6B-X nrPDB Length = 758 Score = 40.6 bits (93), Expect = 0.001, Method: Composition-based stats. Identities = 43/283 (15%), Positives = 89/283 (31%), Gaps = 38/283 (13%) Query: 36 LDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILEL 95 +D + ++ + + L + L G G GKT+ L + ++ + E+ Sbjct: 185 IDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRI-----VQGDVPEV 239 Query: 96 NAS-DERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTA------- 147 A + I R K K L+ I+ +DE ++ Sbjct: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 Query: 148 --DAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKALD-ASNAIDRLRFI 204 DA + ++ + SG R Y R RF+ +D +I+ I Sbjct: 300 QVDAANLIKPLLS--SGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQI 357 Query: 205 SE--------QENVKCDDGVLERILDISAGDLR------RGITLLQSASKGAQYLGDGKN 250 +V+ + ++++ + + I ++ A A+ + K Sbjct: 358 INGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKR 417 Query: 251 ITSTQVEELAGVV------PHDILIEIVEKVKSGDFDEIKKYV 287 + V ++ VV P + + D +K V Sbjct: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLV 460 Score = 39.8 bits (91), Expect = 0.002, Method: Composition-based stats. Identities = 33/129 (25%), Positives = 52/129 (40%), Gaps = 15/129 (11%) Query: 39 VTAQDHAVTVLKKTLKSAN--LPH-------MLFYGPPGTGKTSTILALTKELYGPDLMK 89 V QD A+ L + +K A L H LF GP G GKT + L+K L G +L++ Sbjct: 460 VFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL-GIELLR 518 Query: 90 SRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADA 149 + E ER V + + P+ +++LDE + D Sbjct: 519 FDMSEY---MERH--TVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDV 573 Query: 150 QSALRRTME 158 + L + M+ Sbjct: 574 FNILLQVMD 582 >1IY1-A nrPDB Length = 254 Score = 40.6 bits (93), Expect = 0.001, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 62/184 (33%), Gaps = 34/184 (18%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 +L GPPG GKT A+ E +R+ + AS G V V A V Sbjct: 52 VLLVGPPGVGKTHLARAVAGE--------ARVPFITAS---GSDFVEMFVGVGA-ARVRD 99 Query: 121 PSKHDLENYPCPPYKIIILDEADSMTA--------------DAQSALRRTMETYSGVTRF 166 + + PC I+ +DE D++ + L M+ + T Sbjct: 100 LFETAKRHAPC----IVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGFEKDTAI 155 Query: 167 CL--ICNYVTRIIDPLASRCSKFRFKALDASNAI--DRLRFISEQENVKCDDGVLERILD 222 + N + L R A+DA + +++ I + +D L + Sbjct: 156 VVMAATNRPDILDPALLRPGRFDRQIAIDAPDVKGREQILRIHARGKPLAEDVDLALLAK 215 Query: 223 ISAG 226 + G Sbjct: 216 RTPG 219 >6QI8-A nrPDB Length = 456 Score = 40.6 bits (93), Expect = 0.001, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 11/86 (12%) Query: 39 VTAQDHAVTVLKKTLKSANLPHM-----LFYGPPGTGKTSTILALTKELYGPDLMKSRIL 93 + Q++A ++ M L GPPGTGKT+ LA+ +EL K Sbjct: 39 LVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQEL----GSKVPFC 94 Query: 94 ELNASDERGISIVREKV--KNFARLT 117 + S+ I + +V +NF R Sbjct: 95 PMVGSEVYSTEIKKTEVLMENFRRAI 120 Score = 36.0 bits (81), Expect = 0.028, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 59/167 (35%), Gaps = 17/167 (10%) Query: 106 VREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMET------ 159 + +K++ V+K + ++ +DE + + + L R +E+ Sbjct: 271 ITDKLRGEINKVVNKYIDQGIAELVPG---VLFVDEVHMLDIECFTYLHRALESSIAPIV 327 Query: 160 -YSGVTRFCLI-----CNYVTRIIDPLASRCSKFRFKALDASNAIDRLRFISEQENVKCD 213 ++ C+I I L R R ++ ++ E + Sbjct: 328 IFASNRGNCVIRGTEDITSPHGIPLDLLDRVMIIRTMLYTPQEMKQIIKIRAQTEGINIS 387 Query: 214 DGVLERILDI-SAGDLRRGITLLQSASKGAQYLGDGKNITSTQVEEL 259 + L + +I + LR + LL A+ A+ G +I VEE+ Sbjct: 388 EEALNHLGEIGTKTTLRYSVQLLTPANLLAKINGK-DSIEKEHVEEI 433 >2R65-A nrPDB Length = 268 Score = 39.8 bits (91), Expect = 0.002, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 82/256 (32%), Gaps = 48/256 (18%) Query: 35 NLDEVTAQDHAVTVLKKTLKSANLPH------------MLFYGPPGTGKTSTILALTKEL 82 ++ + A + + + P +L GPPGTGKT A+ E Sbjct: 9 RFKDMAGNEEAKEEVVEIVDFLKYPERYANLGAKIPKGVLLVGPPGTGKTLLAKAVAGEA 68 Query: 83 YGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEA 142 + P + S + + V + + P II +DE Sbjct: 69 HVP------FFSMGGSSFIEMFV------GLGASRVRDLFETAKKQAPS----IIFIDEI 112 Query: 143 DSMTADAQSA---------------LRRTMETY-SGVTRFC-LICNYVTRIIDPLASRCS 185 D++ + L M+ + S L I+DP R Sbjct: 113 DAIGKSRAAGGVVSGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALMRPG 172 Query: 186 KFRFKAL-DASNAIDRLRFISEQ-ENVKCDDGV-LERILDISAGDLRRGITLLQSASKGA 242 +F + L D + R+ + + VK + V L+ + ++AG + + + + Sbjct: 173 RFDRQVLVDKPDFNGRVEILKVHIKGVKLANDVNLQEVAKLTAGLAGADLANIINEAALL 232 Query: 243 QYLGDGKNITSTQVEE 258 + K + ++E Sbjct: 233 AGRNNQKEVRQQHLKE 248 >5FM7-A nrPDB Length = 464 Score = 39.8 bits (91), Expect = 0.002, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 52/167 (31%), Gaps = 18/167 (10%) Query: 106 VREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTR 165 + +K++ V K + ++ +DEA + + + L + +E+ Sbjct: 274 ITDKLRMEINKVVQKYINQGVAELIPG---VLFIDEAHMLDIECFTYLNKALESPIAPI- 329 Query: 166 FCLICN-------------YVTRIIDPLASRCSKFRFKALDASNAIDRLRFISEQENVKC 212 L N I R + +R ++ E V+ Sbjct: 330 VVLASNRGIATIRGADDLKAAHGIPPDFLQRLLIIPTHPYEPDEIRRIVRIRAQTEGVQL 389 Query: 213 DDGVLERILD-ISAGDLRRGITLLQSASKGAQYLGDGKNITSTQVEE 258 D ++R+ + LR + LL AS A+ G + E Sbjct: 390 TDAAVDRVAEHGVRISLRYCLQLLAPASILARVNGRTQVDVQDIAEA 436 Score = 34.4 bits (77), Expect = 0.080, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 6/59 (10%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKV--KNFARLT 117 +L G PGTGKT+ LA+++EL K + S+ + + +V +NF R Sbjct: 69 VLLAGGPGTGKTALALAISQEL----GTKIPFCPITGSEIYSTEVKKTEVLMENFRRAI 123 >2DHR-A nrPDB Length = 499 Score = 39.4 bits (90), Expect = 0.002, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 62/184 (33%), Gaps = 34/184 (18%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 +L GPPG GKT A+ E +R+ + AS G V V A V Sbjct: 67 VLLVGPPGVGKTHLARAVAGE--------ARVPFITAS---GSDFVEMFVGVGA-ARVRD 114 Query: 121 PSKHDLENYPCPPYKIIILDEADSMTA--------------DAQSALRRTMETYSGVTRF 166 + + PC I+ +DE D++ + L M+ + T Sbjct: 115 LFETAKRHAPC----IVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGFEKDTAI 170 Query: 167 CL--ICNYVTRIIDPLASRCSKFRFKALDASNAI--DRLRFISEQENVKCDDGVLERILD 222 + N + L R A+DA + +++ I + +D L + Sbjct: 171 VVMAATNRPDILDPALLRPGRFDRQIAIDAPDVKGREQILRIHARGKPLAEDVDLALLAK 230 Query: 223 ISAG 226 + G Sbjct: 231 RTPG 234 >1FNN-A nrPDB Length = 389 Score = 39.4 bits (90), Expect = 0.002, Method: Composition-based stats. Identities = 48/227 (21%), Positives = 78/227 (34%), Gaps = 48/227 (21%) Query: 57 NLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKV------ 110 + P G PGTGKT T+ L ELY D +R + +N R + + ++ Sbjct: 43 HYPRATLLGRPGTGKTVTLRKLW-ELY-KDKTTARFVYINGFIYRNFTAIIGEIARSLNI 100 Query: 111 ---------KNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYS 161 F L V + DL Y ++LD+A ++ D S R + Sbjct: 101 PFPRRGLSRDEFLALLVEHLRERDL-------YMFLVLDDAFNLAPDILSTFIRLGQEAD 153 Query: 162 GVTRFCLI----------CNYVTRIIDPLASRCSKFRFKALDASNAIDRLRFISE---QE 208 + F + N + + + RF D L ++ E Sbjct: 154 KLGAFRIALVIVGHNDAVLNNLDPSTRGIMGK-YVIRFSPYTKDQIFDILLDRAKAGLAE 212 Query: 209 NVKCDDGVLERILDIS---------AGDLRRGITLLQSASKGAQYLG 246 + +L+ I DI+ GD R I +L ++ AQ G Sbjct: 213 G-SYSEDILQMIADITGAQTPLDTNRGDARLAIDILYRSAYAAQQNG 258 >1QVR-A nrPDB Length = 854 Score = 39.4 bits (90), Expect = 0.002, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 46/129 (35%), Gaps = 12/129 (9%) Query: 39 VTAQDHAVTVLKKTLKSAN---------LPHMLFYGPPGTGKTSTILALTKELYGPDLMK 89 V QD A+ + ++ A + LF GP G GKT L L+ + Sbjct: 560 VVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLF---DTE 616 Query: 90 SRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADA 149 ++ ++ ++ V + + E PY +I+ DE + D Sbjct: 617 EAMIRIDMTEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDV 676 Query: 150 QSALRRTME 158 + L + ++ Sbjct: 677 FNILLQILD 685 Score = 34.4 bits (77), Expect = 0.069, Method: Composition-based stats. Identities = 41/321 (12%), Positives = 97/321 (30%), Gaps = 46/321 (14%) Query: 36 LDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILEL 95 LD V +D + + + L + + G PG GKT+ + L + + D+ + Sbjct: 169 LDPVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGL---- 224 Query: 96 NASDERGISIVREKVKN-FARLTVSKPSKHDLEN-----YPCPPYKIIILDEADSMTADA 149 +G IV ++ + A + L+ I+ +DE ++ Sbjct: 225 -----KGKRIVSLQMGSLLAGAKYRGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAG 279 Query: 150 QSALRRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASNAIDRLRFISEQEN 209 ++ ++ P +R A + + + + Sbjct: 280 KAE----------------GAVDAGNMLKPALARGELRLIGATTLDEYREIEKDPALERR 323 Query: 210 VKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNITSTQVEELAGVVPHDILI 269 + + + + I++L+ + + G I+ + + A + I Sbjct: 324 FQP--------VYVDEPTVEETISILRGLKEKYEVH-HGVRISDSAIIAAATLSHRYITE 374 Query: 270 EIVEKVKSGDFDEIKKYVNTFMKSGWSAASVVNQLHEYYITNDNFDTNFKNQISWLLFTT 329 + DE + ++ SA ++ L + + K + Sbjct: 375 RRLPDKAIDLIDEAAARLRMALE---SAPEEIDALERKKLQLEIEREALKK---EKDPDS 428 Query: 330 DSRLNNGTNEHIQLLNLLVKI 350 RL E +L + K+ Sbjct: 429 QERLKAIEAEIAKLTEEIAKL 449 >6AZ0-A nrPDB Length = 439 Score = 39.4 bits (90), Expect = 0.002, Method: Composition-based stats. Identities = 37/213 (17%), Positives = 65/213 (30%), Gaps = 44/213 (20%) Query: 36 LDEVTAQDHAVTVLKKTLK-----------SANLPH-MLFYGPPGTGKTSTILALTKELY 83 D+V D A L++ + LP +L GPPGTGKT A E Sbjct: 2 FDDVCGCDEARAELEEIVDFLKDPTKYESLGGKLPKGVLLTGPPGTGKTLLARATAGE-- 59 Query: 84 GPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEAD 143 ++ S+ V V + P II +D+ D Sbjct: 60 ----AGVDFFFMSGSE---FDEVYVGVGA---KRIRDLFAQARSRAPA----IIFIDQLD 105 Query: 144 SM-----------TADAQSALRRTMETYSGVTRFCLI--CNYVTRIIDPLASRCSKFRFK 190 ++ + L ++ +S + +I N+ + L + Sbjct: 106 AIGGKRNPKDQAYAKQTLNQLLVELDGFSQTSGIIIIGATNFPEALDKALTRPGRFDKVV 165 Query: 191 ALDASNAIDRLRFISEQ--ENVKCDDGVLERIL 221 +D + R I + + + D V I+ Sbjct: 166 NVDLPDVRGR-ADILKHHMKKITLADNVDPTII 197 >4WW4-B nrPDB Length = 513 Score = 39.4 bits (90), Expect = 0.003, Method: Composition-based stats. Identities = 17/147 (11%), Positives = 44/147 (29%), Gaps = 19/147 (12%) Query: 106 VREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTR 165 +R ++++ V++ + ++ +DE + + S + R +E S + Sbjct: 292 IRSEIRDQINTKVAEWKEEGKAEIVPG---VLFIDEVHMLDIECFSYINRALE--SDLAP 346 Query: 166 FCLICNY-------------VTRIIDPLASRCSKFRFKALDASNAIDRLRFISEQENVKC 212 ++ + + R L +++E V Sbjct: 347 IVIMASNRGVSRIRGTDYKSPHGLPLDFLDRVVIINTHPYTPDELRQILSIRAQEEEVDL 406 Query: 213 DDGVLERILDI-SAGDLRRGITLLQSA 238 L + I LR L+ ++ Sbjct: 407 TPDALALLTKIGQEAGLRYASNLITTS 433 Score = 33.6 bits (75), Expect = 0.14, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 6/56 (10%) Query: 32 RPKNLDEVTAQDHAVTVLKKTLK---SANL--PHMLFYGPPGTGKTSTILALTKEL 82 RP + + Q+ A L+ + +L GPP TGKT+ + + + L Sbjct: 65 RPSS-QGLVGQEKARKAAAVVLEMIKQGKIAGRAVLIAGPPSTGKTAIAMGMAQSL 119 >5OFO-C nrPDB Length = 871 Score = 39.4 bits (90), Expect = 0.003, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 48/129 (37%), Gaps = 12/129 (9%) Query: 39 VTAQDHAVTVLKKTLKSAN---------LPHMLFYGPPGTGKTSTILALTKELYGPDLMK 89 V Q+ AV + ++ + + LF GP G GKT AL ++ D Sbjct: 574 VIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEA- 632 Query: 90 SRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADA 149 ++ ++ S+ V V + + E PY +I+LD + D Sbjct: 633 --MVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDAVEKAHPDV 690 Query: 150 QSALRRTME 158 + L + ++ Sbjct: 691 FNILLQVLD 699 Score = 39.0 bits (89), Expect = 0.003, Method: Composition-based stats. Identities = 40/253 (15%), Positives = 78/253 (30%), Gaps = 42/253 (16%) Query: 27 WVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPD 86 E+ LD V +D + + L+ + + G PG GKT+ + L + + Sbjct: 172 LTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRI---- 227 Query: 87 LMKSRILELNASDE---RGISIVREKVKNF-ARLTVSKPSKHDLENYPCPPYK-----II 137 +N +G ++ + A + L+ K I+ Sbjct: 228 --------INGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVIL 279 Query: 138 ILDEADSMTA--------DAQSALRRTMETYSGVTRFCLICNYVTRIID---PLASRCSK 186 +D +M DA + L+ + + + I+ L R K Sbjct: 280 FIDALHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQK 339 Query: 187 FRFKALDASNAIDRLRFISE----QENVKCDDGVLERILDISAGDLR------RGITLLQ 236 + I LR + E +V+ D + +S + + I L+ Sbjct: 340 VFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLID 399 Query: 237 SASKGAQYLGDGK 249 A+ + D K Sbjct: 400 EAASSIRMQIDSK 412 >6EF0-M nrPDB Length = 258 Score = 39.0 bits (89), Expect = 0.003, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 68/204 (33%), Gaps = 43/204 (21%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 L YGPPGTGKT A + + L+L A ++ + + Sbjct: 43 ALMYGPPGTGKTLLARACAAQ------TNATFLKLAAP-------------QLVQMYIGE 83 Query: 121 PSKHDLENYPCPPYK---IIILDEADSMTADAQSA--------------LRRTMETYSGV 163 +K + + K II +DE D++ + L ++ +S Sbjct: 84 GAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEKSGDREVQRTMLELLNQLDGFSSD 143 Query: 164 TRF-CLICNYVTRIIDPLASRCSKFRFK---ALDASNAIDRLRFISEQENVKCDDGVLER 219 R L ++DP R + K L + ++ ++ I ++ DD + Sbjct: 144 DRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRAQILQIHSRKMTTDDDINWQE 203 Query: 220 ILDIS---AGDLRRGITLLQSASK 240 + + G + +T+ Sbjct: 204 LARSTDEFNGAQLKAVTVEAGMIA 227 >5VHO-F nrPDB Length = 267 Score = 39.0 bits (89), Expect = 0.003, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 51/166 (30%), Gaps = 42/166 (25%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 +L YGPPGTGKT A + K+ L+L ++ + Sbjct: 58 VLMYGPPGTGKTLLARACAAQ------TKATFLKLAGP-------------QLVQMFIGD 98 Query: 121 PSKHDLENYPCPPYK---IIILDEADSM--------TADAQSALRRTMET--------YS 161 +K + + K II +DE D++ A + R +E + Sbjct: 99 GAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPN 158 Query: 162 GVTRFCLICNYVTRIIDPLASRCSK---FRFKALDASNAIDRLRFI 204 + N V + L F + A R+ I Sbjct: 159 TQVKVIAATNRVDILDPALLRSGRLDRKIEF-PMPNEEARARIMQI 203 >3SYK-A nrPDB Length = 309 Score = 38.7 bits (88), Expect = 0.004, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 67/207 (32%), Gaps = 30/207 (14%) Query: 30 KYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMK 89 K R + + + A L ++ L HM F G PGTGKT+ L + L+ ++ Sbjct: 40 KDRIRETAALLLVERARQKLGLAHETPTL-HMSFTGNPGTGKTTVALKMAGLLHRLGYVR 98 Query: 90 SRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTA-- 147 L +S+ R+ + + +K L+ ++ +DEA + Sbjct: 99 KGHL---------VSVTRDDLVGQYIGHTAPKTKEVLKRAMGG---VLFIDEAYYLYRPD 146 Query: 148 -------DAQSALRRTMETYSGVTRFCLICNYVTRIIDPLAS----RCSK---FRFKALD 193 +A L + ME L Y R+ + S R F Sbjct: 147 NERDYGQEAIEILLQVMENNRDDLVVILA-GYADRMENFFQSNPGFRSRIAHHIEFPDYS 205 Query: 194 ASNAIDRLRFISEQENVKCDDGVLERI 220 + + + +N + + Sbjct: 206 DEELFEIAGHMLDDQNYQMTPEAETAL 232 >5BQ5-A nrPDB Length = 189 Score = 38.7 bits (88), Expect = 0.004, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 39/119 (32%), Gaps = 16/119 (13%) Query: 59 PHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTV 118 ++LF GPPG GKT +++ E + I + N R Sbjct: 40 ENILFLGPPGIGKTHLAISIGMEAIARGY-------------KTYFITAHDLVNQLRRAD 86 Query: 119 SKPSKHDLENYPCPPYKIIILDEADSMTADAQSA--LRRTMETYSGVTRFCLICNYVTR 175 + K + + ++I+DE + D SA L + + L N Sbjct: 87 QEG-KLEKKLRVFVKPTVLIIDEMGYLKLDPNSAHYLFQVIARRYEHAPIILTSNKSFG 144 >4XGU-A nrPDB Length = 424 Score = 38.7 bits (88), Expect = 0.004, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 8/88 (9%) Query: 61 MLFYGPPGTGKTSTILALTKEL---YGPDLMKSRILELNASDERGISIVREKVKNFARLT 117 +L GPPGTGKTS L + L KS +LE+N+ Sbjct: 175 ILLTGPPGTGKTSLCKGLAQHLSIRMNDKYSKSVMLEINSHSLFSKWFSESG---KLVQK 231 Query: 118 VSKPSKHDLENYPCPPYKIIILDEADSM 145 + E+ C + +++DE +S+ Sbjct: 232 MFDQIDELAEDEKCMVF--VLIDEVESL 257 >5VFP-F nrPDB Length = 396 Score = 38.3 bits (87), Expect = 0.005, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 51/166 (30%), Gaps = 42/166 (25%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 +L YGPPGTGKT A + K+ L+L ++ + Sbjct: 180 VLMYGPPGTGKTLLARACAAQ------TKATFLKLAGP-------------QLVQMFIGD 220 Query: 121 PSKHDLENYPCPPYK---IIILDEADSM--------TADAQSALRRTMET--------YS 161 +K + + K II +DE D++ A + R +E + Sbjct: 221 GAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPN 280 Query: 162 GVTRFCLICNYVTRIIDPLASRCSK---FRFKALDASNAIDRLRFI 204 + N V + L F + A R+ I Sbjct: 281 TQVKVIAATNRVDILDPALLRSGRLDRKIEF-PMPNEEARARIMQI 325 >1JBK-A nrPDB Length = 195 Score = 38.3 bits (87), Expect = 0.006, Method: Composition-based stats. Identities = 32/196 (16%), Positives = 60/196 (30%), Gaps = 32/196 (16%) Query: 27 WVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPD 86 E+ LD V +D + + L+ + + G PG GKT+ + L + + Sbjct: 12 LTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRI---- 67 Query: 87 LMKSRILELNASDE---RGISIVREKVKNF-ARLTVSKPSKHDLENYPCPPYK-----II 137 +N +G ++ + A + L+ K I+ Sbjct: 68 --------INGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVIL 119 Query: 138 ILDEADSMTA--------DAQSALRRTMETYSGVTRFCLICNYVTRIID---PLASRCSK 186 +DE +M DA + L+ + + + I+ L R K Sbjct: 120 FIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQK 179 Query: 187 FRFKALDASNAIDRLR 202 + I LR Sbjct: 180 VFVAEPSVEDTIAILR 195 >6EPD-M nrPDB Length = 442 Score = 38.3 bits (87), Expect = 0.006, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 51/166 (30%), Gaps = 42/166 (25%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 +L YGPPGTGKT A + K+ L+L ++ + Sbjct: 226 VLMYGPPGTGKTLLARACAAQ------TKATFLKLAGP-------------QLVQMFIGD 266 Query: 121 PSKHDLENYPCPPYK---IIILDEADSM--------TADAQSALRRTMET--------YS 161 +K + + K II +DE D++ A + R +E + Sbjct: 267 GAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPN 326 Query: 162 GVTRFCLICNYVTRIIDPLASRCSK---FRFKALDASNAIDRLRFI 204 + N V + L F + A R+ I Sbjct: 327 TQVKVIAATNRVDILDPALLRSGRLDRKIEF-PMPNEEARARIMQI 371 >6QEL-G nrPDB Length = 245 Score = 38.3 bits (87), Expect = 0.006, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Query: 38 EVTAQDHAVTVLKKTLK--SANLPHMLFYGPPGTGKTSTILALTKELY 83 E Q +A++ ++ ++ N+ +F G PGTGK A+ EL Sbjct: 77 ECEGQMNALSKARQYVEEFDGNIASFIFSGKPGTGKNHLAAAICNELL 124 >5E7P-A nrPDB Length = 745 Score = 38.3 bits (87), Expect = 0.006, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 54/163 (33%), Gaps = 33/163 (20%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 +L YGPPG GKT + AL L+ +G ++ + V + + V + Sbjct: 522 VLLYGPPGCGKTFVVRALASS-----------GRLSVHAVKGSELMDKWVGS-SEKAVRE 569 Query: 121 PSKHDLENYPCPPYKIIILDEADSM------------TADAQSALRRTME--TYSGVTRF 166 ++ P ++ LDE D++ T ++L ++ Sbjct: 570 LFARARDSAPS----LVFLDEIDALAPRRGQNFDSGVTDKVVASLLTELDGIEPLRDVVV 625 Query: 167 CLICNYVTRIIDPLASRCSKFRF---KALDASNAIDRLRFISE 206 N I L R + DA+ D LR + Sbjct: 626 LGATNRPDLIDPALLRPGRLERLVFVEPPDAAARRDILRTAGK 668 Score = 34.8 bits (78), Expect = 0.061, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 35/93 (37%), Gaps = 7/93 (7%) Query: 56 ANLPHM--LFYGPPGTGKTSTILALTK-----ELYGPDLMKSRILELNASDERGISIVRE 108 PH+ L GP G GK + + A+ EL GP++ ++ E S ++ V E Sbjct: 259 GATPHLGVLVSGPAGVGKATMVRAVCASRRVVELDGPEVGALQVDERLRSVTSAVAAVTE 318 Query: 109 KVKNFARLTVSKPSKHDLENYPCPPYKIIILDE 141 V E P P +IL E Sbjct: 319 SGGVLFIADVDALLPAGNEMRPPEPVATLILAE 351 >2R44-A nrPDB Length = 331 Score = 37.9 bits (86), Expect = 0.007, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 70/209 (33%), Gaps = 31/209 (14%) Query: 15 KLAAEQSLAQQPWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTST 74 K A E+SL + +++ + V Q + + L + + H+L G PG KT + Sbjct: 5 KSAEEKSLYYRNKIKEVIDEVGKVVVGQKYMINRLLIGICTGG--HILLEGVPGLAKTLS 62 Query: 75 ILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPY 134 + L K + +L SD G I + NF Sbjct: 63 VNTLAKTMDLDFHRIQFTPDLLPSDLIGTMIYNQHKGNFEVKK------------GPVFS 110 Query: 135 KIIILDEADSMTADAQSALRRTME---------TYSGVTRFCLICNY-------VTRIID 178 I+ DE + A QSAL M+ TY F ++ + + Sbjct: 111 NFILADEVNRSPAKVQSALLECMQEKQVTIGDTTYPLDNPFLVLATQNPVEQEGTYPLPE 170 Query: 179 P-LASRCSKFRFKALDASNAIDRLRFISE 206 + K LD + ++ +R +S Sbjct: 171 AQVDRFMMKIHLTYLDKESELEVMRRVSN 199 >6D00-1 nrPDB Length = 883 Score = 37.9 bits (86), Expect = 0.007, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 39/116 (33%), Gaps = 6/116 (5%) Query: 36 LDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILEL 95 LD V +D ++ + + L + G PG GKT+ L + +K I Sbjct: 177 LDPVIGRDEIISRVIRVLSRRTKNNPCLVGEPGVGKTAIAEGLANRI-----VKGDIPSS 231 Query: 96 NASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQS 151 + I R + K L+ I+ +DE ++ +S Sbjct: 232 LQKKVYSLDIGSLLAGAKYRGEFEERLKAVLKELKEAQ-AIVFIDEIHTVLGAGKS 286 Score = 36.3 bits (82), Expect = 0.021, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 47/131 (35%), Gaps = 12/131 (9%) Query: 37 DEVTAQDHAVTVL-------KKTLKSANLP--HMLFYGPPGTGKTSTILALTKELYGPDL 87 V QD A+ + + L++ N P LF GP G GKT + L L+ Sbjct: 570 QHVVGQDEAIKAICDAIRLSRTGLQNRNRPLASFLFLGPTGCGKTLCVKELAAFLFND-- 627 Query: 88 MKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTA 147 I+ ++ S+ V V E PY +++ DE + Sbjct: 628 -PGAIVRIDMSEYMEKHAVSRLVGAPPGYIGHDEGGQLTEAVRRRPYTVVLFDEMEKAHK 686 Query: 148 DAQSALRRTME 158 D + L + ++ Sbjct: 687 DVSNLLLQILD 697 >5A5B-M nrPDB Length = 434 Score = 37.5 bits (85), Expect = 0.008, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 68/204 (33%), Gaps = 43/204 (21%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 L YGPPGTGKT A + + L+L A ++ + + Sbjct: 218 ALMYGPPGTGKTLLARACAAQ------TNATFLKLAAP-------------QLVQMYIGE 258 Query: 121 PSKHDLENYPCPPYK---IIILDEADSMTADAQSA--------------LRRTMETYSGV 163 +K + + K II +DE D++ + L ++ +S Sbjct: 259 GAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEKSGDREVQRTMLELLNQLDGFSSD 318 Query: 164 TRF-CLICNYVTRIIDPLASRCSKFRFK---ALDASNAIDRLRFISEQENVKCDDGVLER 219 R L ++DP R + K L + ++ ++ I ++ DD + Sbjct: 319 DRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRAQILQIHSRKMTTDDDINWQE 378 Query: 220 ILDIS---AGDLRRGITLLQSASK 240 + + G + +T+ Sbjct: 379 LARSTDEFNGAQLKAVTVEAGMIA 402 >2V1U-A nrPDB Length = 387 Score = 37.5 bits (85), Expect = 0.009, Method: Composition-based stats. Identities = 58/306 (18%), Positives = 96/306 (31%), Gaps = 42/306 (13%) Query: 19 EQSLAQQPWV--EKYRPKNLDEVTAQ-DHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTI 75 E + ++ WV Y P L A+ VL L+ + L YG GTGKT+ Sbjct: 2 ESKIFRKRWVLLPDYVPDVLPHREAELRRLAEVLAPALRGEKPSNALLYGLTGTGKTAVA 61 Query: 76 LALTKELYGPDLMKSRI---LELNASDERGISIVREKVKN-------FARLTVSKPSKHD 125 + + L + + +NA V + F L+V + + Sbjct: 62 RLVLRRLEARASSLGVLVKPIYVNARHRETPYRVASAIAEAVGVRVPFTGLSVGEVYERL 121 Query: 126 LENYPCPP-YKIIILDEADSMTA--DAQSALRRTM----ETYSGVTRFCLICNYVTRIID 178 ++ II+LDE D + Q L R E V + ++ Sbjct: 122 VKRLSRLRGIYIIVLDEIDFLPKRPGGQDLLYRITRINQELGDRVWVSLVGITNSLGFVE 181 Query: 179 PLASRCS------KFRFKALDASNAIDRLRFISEQ--ENVKCDDGVL---ERILDISAGD 227 L R + F A D L +E+ D V+ + GD Sbjct: 182 NLEPRVKSSLGEVELVFPPYTAPQLRDILETRAEEAFNPGVLDPDVVPLCAALAAREHGD 241 Query: 228 LRRGITLLQSASKGA-----------QYLGDGKNITSTQVEELAGVVPHDILIEIVEKVK 276 RR + LL+ A + A I +V E+ +P + ++ + Sbjct: 242 ARRALDLLRVAGEIAERRREERVRREHVYSARAEIERDRVSEVVRTLPLHAKLVLLSIMM 301 Query: 277 SGDFDE 282 D Sbjct: 302 LEDGGR 307 >4XGC-D nrPDB Length = 459 Score = 37.1 bits (84), Expect = 0.012, Method: Composition-based stats. Identities = 26/122 (21%), Positives = 48/122 (39%), Gaps = 16/122 (13%) Query: 49 LKKTLKSANLPHMLFYGPPGTGKTSTILALTKEL-----YGPDLMKSRILELNASDER-- 101 L++T + +L GP G+GKT+ I ++ +L +G + + + +D+R Sbjct: 40 LQRTAEMGESNSLLLLGPRGSGKTTLINSVLADLLPNKSFGENTLIVHLDGNLHTDDRVA 99 Query: 102 -GISIVREKVKNFARLTVSKPSKHDLENYP-----CPPYK---IIILDEADSMTADAQSA 152 V+ +++N A V +L + I IL+E D A Sbjct: 100 LKSITVQMQLENAADGKVFGSFAENLAFLLQCLKAGGKHSKSVIFILEEFDLFCAHHNQT 159 Query: 153 LR 154 L Sbjct: 160 LL 161 >4I5O-A nrPDB Length = 363 Score = 37.1 bits (84), Expect = 0.013, Method: Composition-based stats. Identities = 28/152 (18%), Positives = 45/152 (29%), Gaps = 41/152 (26%) Query: 37 DEVTAQDHAVTVLK----------------KTLKSANLPHMLFYGPPGTGKTSTILALTK 80 D V Q+ A VL ++ ++L GP G+GKT L + Sbjct: 15 DYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGK-SNILLIGPTGSGKTLLAETLAR 73 Query: 81 ELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILD 140 L P M A V + K + + I+ +D Sbjct: 74 LLDVPFTMADATTLTEA----------GYVGEDVENIIQKLLQKCDYDVQKAQRGIVYID 123 Query: 141 EADSMTADA--------------QSALRRTME 158 E D ++ + Q AL + +E Sbjct: 124 EIDKISRKSDNPSITRDVSGEGVQQALLKLIE 155 >3UPU-A nrPDB Length = 459 Score = 36.7 bits (83), Expect = 0.015, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 51/156 (32%), Gaps = 16/156 (10%) Query: 35 NLDEVT-AQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELY---------- 83 D++T Q +A ++ K +K H+ GP GTG T+ + + L Sbjct: 22 TFDDLTEGQKNAFNIVMKAIKEKK-HHVTINGPAGTGATTLTKFIIEALISTGETGIILA 80 Query: 84 GPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEAD 143 P +IL + E S + +K E +++I DE Sbjct: 81 APTHAAKKILSKLSGKE--ASTIHSILKINPVTYEENVLFEQKEVPDLAKCRVLICDEVS 138 Query: 144 SMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDP 179 L T+ T + N R +DP Sbjct: 139 MYDRKLFKILLSTI--PPWCTIIGIGDNKQIRPVDP 172 >4XRP-A nrPDB Length = 312 Score = 36.7 bits (83), Expect = 0.016, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 57/171 (33%), Gaps = 18/171 (10%) Query: 55 SANLPH----MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKV 110 N H ++ G PG+GK++ + + + +N D R + + Sbjct: 4 KNNTHHFPKLLILVGAPGSGKSTFARYFIR-------TEDNWVRVNRDDFRLMQFGDSLM 56 Query: 111 KNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLIC 170 F ++K + + +II D +S Q + E F + Sbjct: 57 SPFYEERITKMVEASVIALLKNRTNVII-DATNSSLRSLQDMVHTYTEY--ADISFKVFD 113 Query: 171 NYVTRIIDPLASRCSKFRFKALDASNAID---RLRFISEQENVKCDDGVLE 218 V ++ RC + K + S +L++ E+ + K L+ Sbjct: 114 LPVEELVKRCDKRCEQ-TGKFIPKSAIEKHVTQLQYTKEKFDFKPIPRALK 163 >4Z8X-A nrPDB Length = 497 Score = 36.3 bits (82), Expect = 0.022, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 61/186 (32%), Gaps = 37/186 (19%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 +L YG PG GKT A+ E + P + ++ SD + + V V Sbjct: 54 VLLYGEPGVGKTLLAKAIAGEAHVP------FISVSGSDFVEMFV---GVGA---ARVRD 101 Query: 121 PSKHDLENYPCPPYKIIILDEADSMTAD---------------AQSALRRTMETYSGVTR 165 + ++ PC +I +DE D++ + L M+ + Sbjct: 102 LFETAKKHAPC----MIFIDEIDAVGRARGAIPVGGGHDEREQTLNQLLVEMDGFDTSDG 157 Query: 166 FC-LICNYVTRIIDPLASRC----SKFRFKALDASNAIDRLRFISEQENVKCDDGVLERI 220 + I+DP R + D + L+ + + + D LE + Sbjct: 158 IIVIAATNRPDILDPALLRPGRFDRQIFIPKPDVRGRYEILKVHARNKKLAKDVD-LEFV 216 Query: 221 LDISAG 226 + G Sbjct: 217 ARATPG 222 >3JCP-I nrPDB Length = 437 Score = 36.3 bits (82), Expect = 0.022, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 57/160 (35%), Gaps = 35/160 (21%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 ++ YG PGTGKT A+ + + L + S ++++ + + RL + Sbjct: 219 VILYGAPGTGKTLLAKAVA------NQTSATFLRIVGS-----ELIQKYLGDGPRLC-RQ 266 Query: 121 PSKHDLENYPCPPYKIIILDEADSM-------TADAQSALRRTMETY---------SGVT 164 K EN P I+ +DE D++ + + ++RTM G Sbjct: 267 IFKVAGENAPS----IVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDDRGDV 322 Query: 165 RFCLICNYVTRIIDPLASRCSK---FRFKALDASNAIDRL 201 + + N + + L F+ D S L Sbjct: 323 KVIMATNKIETLDPALIRPGRIDRKILFENPDLSTKKKIL 362 >3EXA-A nrPDB Length = 322 Score = 36.0 bits (81), Expect = 0.029, Method: Composition-based stats. Identities = 45/273 (16%), Positives = 86/273 (31%), Gaps = 37/273 (13%) Query: 65 GPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKH 124 GP GKT T + L K L G + + RG+ I K+ Sbjct: 10 GPTAVGKTKTSVMLAKRLNGEVISGDSM-----QVYRGMDIGTAKIT------------- 51 Query: 125 DLENYPCPPYKIIILDEADSMT-ADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASR 183 E P + I I D ++S + AD Q + R + ++ + + Sbjct: 52 AEEMDGVPHHLIDIKDPSESFSVADFQDLATPLITEIHERGRLPFLVGGTGLYVNAVIHQ 111 Query: 184 CSKFRFKALDASNAIDRLRFISEQENVKCDDGVL-----ERILDISAGDLRRGITLLQ-- 236 + +A + L V+ L + I + RR I L+ Sbjct: 112 FNLGDIRA--DEDYRHELEAFVNSYGVQALHDKLSKIDPKAAAAIHPNNYRRVIRALEII 169 Query: 237 --------SASKGAQYLGDGKNITSTQVEELAGVVPHDILIEIVEKVKSGDFDEIKKYVN 288 ++ + N+ + V+ I + + V+ G DE KK + Sbjct: 170 KLTGKTVTEQARHEEETPSPYNLVMIGLTMERDVLYDRINRRVDQMVEEGLIDEAKKLYD 229 Query: 289 TFMKSGWSAASV-VNQLHEYYITNDNFDTNFKN 320 ++ S ++ ++++Y N + Sbjct: 230 RGIRDCQSVQAIGYKEMYDYLDGNVTLEEAIDT 262 >6FVU-I nrPDB Length = 384 Score = 36.0 bits (81), Expect = 0.029, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 57/160 (35%), Gaps = 35/160 (21%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 ++ YG PGTGKT A+ + + L + S ++++ + + RL + Sbjct: 166 VILYGAPGTGKTLLAKAVA------NQTSATFLRIVGS-----ELIQKYLGDGPRLC-RQ 213 Query: 121 PSKHDLENYPCPPYKIIILDEADSM-------TADAQSALRRTMETY---------SGVT 164 K EN P I+ +DE D++ + + ++RTM G Sbjct: 214 IFKVAGENAPS----IVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDDRGDV 269 Query: 165 RFCLICNYVTRIIDPLASRCSK---FRFKALDASNAIDRL 201 + + N + + L F+ D S L Sbjct: 270 KVIMATNKIETLDPALIRPGRIDRKILFENPDLSTKKKIL 309 >3GP8-A nrPDB Length = 574 Score = 35.6 bits (80), Expect = 0.031, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 2/86 (2%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKN-FARLTVS 119 ++ G PGTGK++T A+ +L ++ + R + V + + RL Sbjct: 207 VVLTGGPGTGKSTTTKAVA-DLAESLGLEVGLCAPTGKAARRLGEVTGRTASTVHRLLGY 265 Query: 120 KPSKHDLENYPCPPYKIIILDEADSM 145 P + PY ++I+DE M Sbjct: 266 GPQGFRHNHLEPAPYDLLIVDEVSMM 291 >6EF1-I nrPDB Length = 271 Score = 35.6 bits (80), Expect = 0.038, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 57/160 (35%), Gaps = 35/160 (21%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 ++ YG PGTGKT A+ + + L + S ++++ + + RL + Sbjct: 53 VILYGAPGTGKTLLAKAVA------NQTSATFLRIVGS-----ELIQKYLGDGPRLC-RQ 100 Query: 121 PSKHDLENYPCPPYKIIILDEADSM-------TADAQSALRRTMETY---------SGVT 164 K EN P I+ +DE D++ + + ++RTM G Sbjct: 101 IFKVAGENAPS----IVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDDRGDV 156 Query: 165 RFCLICNYVTRIIDPLASRCSK---FRFKALDASNAIDRL 201 + + N + + L F+ D S L Sbjct: 157 KVIMATNKIETLDPALIRPGRIDRKILFENPDLSTKKKIL 196 >4L16-A nrPDB Length = 334 Score = 35.2 bits (79), Expect = 0.039, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 73/233 (31%), Gaps = 46/233 (19%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 +L +GPPGTGKT + + K+ ++AS V + Sbjct: 92 VLLFGPPGTGKTMIGRCVASQ------CKATFFNISASS-------------LTSKWVGE 132 Query: 121 PSKHDLENYPCPPYK---IIILDEADSMTADAQSA---------------LRRTMETYSG 162 K + K +I +DE DS+ + + L Sbjct: 133 GEKLVRALFSVARLKLPSVIFIDEIDSLLSSRSESEHESSRRIKTEFLVQLDGVNTAPDE 192 Query: 163 VTRFCLICNYVTRIIDPLASRCSKFRFKALDASNAIDRL-RFISEQENVKCDDGVLERIL 221 N + + R K + AL + ++ + + + LERI Sbjct: 193 RLLVLGATNRPQELDEAARRRFQKRLYIALPEPESRTQIVQNLLVGTRHDITNHNLERIR 252 Query: 222 DISAG----DLRRGITLLQSASKGAQYLGDGKNITSTQVEELAGVVPHDILIE 270 +++ G D+R+ L + + G +I + +++ V D Sbjct: 253 ELTDGYSGADMRQ----LCTEAAMGPIRDIGDDIETIDKDDIRAVTVMDFAEA 301 >5VY8-A nrPDB Length = 908 Score = 35.2 bits (79), Expect = 0.045, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 67/213 (31%), Gaps = 12/213 (5%) Query: 28 VEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDL 87 E+ R LD V ++ + + L + G PG GKT+ I + + + D+ Sbjct: 175 TEQARQGKLDPVIGREEEIRSTIRVLARRIKSNPCLIGEPGIGKTAIIEGVAQRIIDDDV 234 Query: 88 MKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKII-ILDEADSMT 146 L + + + + + K L+ I+ +DE + Sbjct: 235 PTI----LQGAKLFSLDLAALTAGAKYKGDFEERFKGVLKEIEESKTLIVLFIDEIHMLM 290 Query: 147 A----DAQSALRRTMETYSGVTRFCLICNYVTRIID---PLASRCSKFRFKALDASNAID 199 DA + L+ + N I++ R K + Sbjct: 291 GNGKDDAANILKPALSRGQLKVIGATTNNEYRSIVEKDGAFERRFQKIEVAEPSVRQTVA 350 Query: 200 RLRFISEQENVKCDDGVLERILDISAGDLRRGI 232 LR + + + +L+ L +A +R + Sbjct: 351 ILRGLQPKYEIHHGVRILDSALVTAAQLAKRYL 383 Score = 30.6 bits (67), Expect = 0.97, Method: Composition-based stats. Identities = 46/322 (14%), Positives = 100/322 (31%), Gaps = 33/322 (10%) Query: 37 DEVTAQDHAVTVLKKTLK--------SANLPHMLFYGPPGTGKTSTILALTKELYGPDLM 88 EV Q A+ + ++ LF G G+GKT + L+ Sbjct: 578 SEVVGQMDAIKAVSNAVRLSRSGLANPRQPASFLFLGLSGSGKTELAKKVAGFLFND--- 634 Query: 89 KSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTAD 148 + ++ ++ S+ V + + A PY +++ DE + D Sbjct: 635 EDMMIRVDCSELSEKYAVSKLLGTTAGYVGYDEGGFLTNQLQYKPYSVLLFDEVEKAHPD 694 Query: 149 AQSALRRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASNAIDRLRFISEQE 208 + + + ++ I + + ID S C L A FI+ Q+ Sbjct: 695 VLTVMLQMLDDGR-------ITSGQGKTID--CSNCIVIMTSNLGAE-------FINSQQ 738 Query: 209 NVKCDDGVLERILDISAGDLR-RGITLLQSASKGAQYLGDG-KNITSTQVEELAGVVPHD 266 K + ++ R + + S + I +++E+ + Sbjct: 739 GSKIQESTKNLVMGAVRQHFRPEFLNRISSIVIFNKLSRKAIHKIVDIRLKEIEERFEQN 798 Query: 267 ILIEIVEKVKSG-DFDEIKKYVNTFMKSGWS---AASVVNQLHEYYITNDNFDTNFKNQI 322 + + DF Y + + ++N+L + N+ D N + Sbjct: 799 DKHYKLNLTQEAKDFLAKYGYSDDMGARPLNRLIQNEILNKLALRILKNEIKDKETVNVV 858 Query: 323 SWLLFTTDSRLNNGTNEHIQLL 344 + D + E +++L Sbjct: 859 LKKGKSRDENVPEEAEECLEVL 880 >4M4W-J nrPDB Length = 317 Score = 35.2 bits (79), Expect = 0.049, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 33/85 (38%), Gaps = 15/85 (17%) Query: 10 KRKISKLAAEQSLAQQPWVEK------------YRPKNLDEVTAQDHAVTVLKKTLKSAN 57 KRK+ + +QSL + ++++ P L H LK ++ Sbjct: 104 KRKLDQQKKQQSLMKSMYIQQDLLGATFQQVDISDPSRLAMF---QHVTDFLKSYNETGK 160 Query: 58 LPHMLFYGPPGTGKTSTILALTKEL 82 + YG G GKT + A+ EL Sbjct: 161 GKGLYLYGKFGVGKTFMLAAIANEL 185 >2NZJ-A nrPDB Length = 175 Score = 34.8 bits (78), Expect = 0.058, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 22/137 (16%) Query: 58 LPHMLFYGPPGTGKTSTILALT-------KELYGPDLMKSRILELNASDERGISIVREKV 110 L ++ G PG GKTS E G D+ + R L ++ D + + + Sbjct: 4 LYRVVLLGDPGVGKTSLASLFAGKQERDLHEQLGEDVYE-RTLTVDGEDTTLVVVDTWEA 62 Query: 111 KNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMET--YSGVTRFCL 168 + + + +I+ AD + ++ S LR + + L Sbjct: 63 EKLDKSWSQESC------LQGGSAYVIVYSIADRGSFESASELRIQLRRTHQADHVPIIL 116 Query: 169 ICNYVTRIIDPLASRCS 185 + N +RC Sbjct: 117 VGNKAD------LARCR 127 >5WWP-B nrPDB Length = 600 Score = 34.4 bits (77), Expect = 0.067, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 53/165 (32%), Gaps = 26/165 (15%) Query: 39 VTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPD----------LM 88 +T + + + KS ++ GPPGTGK+ + L +Y P Sbjct: 258 ITVPEEFASHVANFQKSGYSKYVTVQGPPGTGKSHFAIGLA--IYYPTARVVYTACSHAA 315 Query: 89 KSRILE-----LNASDERGISIVREKVKNFARLTVSKPSKHDL----ENYPCPPYKIIIL 139 + E LN + I + +V+ + R V++ + L P I+++ Sbjct: 316 VDALCEKAFKYLNIAKCSRIIPAKARVECYDRFKVNETNSQYLFSTINALPETSADILVV 375 Query: 140 DEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRI-IDPLASR 183 DE T + + + L +R Sbjct: 376 DEVSMCTNYD----LSIINARIKAKHIVYVGDPAQLPAPRTLLTR 416 >2QZ4-A nrPDB Length = 262 Score = 34.4 bits (77), Expect = 0.067, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 28/87 (32%), Gaps = 16/87 (18%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 L GPPG GKT A+ E P L + + + V Sbjct: 42 ALLLGPPGCGKTLLAKAVATEAQVPFLAMAGAEFVEV------------IGGLGAARVRS 89 Query: 121 PSKHDLENYPCPPYKIIILDEADSMTA 147 K PC I+ +DE D++ Sbjct: 90 LFKEARARAPC----IVYIDEIDAVGK 112 >2P65-A nrPDB Length = 187 Score = 34.4 bits (77), Expect = 0.080, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 41/118 (34%), Gaps = 5/118 (4%) Query: 32 RPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSR 91 R LD V +D + + L + + G PG GKT+ + L ++ D+ S Sbjct: 17 RAGKLDPVIGRDTEIRRAIQILSRRTKNNPILLGDPGVGKTAIVEGLAIKIVQGDVPDS- 75 Query: 92 ILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKII-ILDEADSMTAD 148 L + + R + K L+ +++ +DE ++ Sbjct: 76 ---LKGRKLVSLDLSSLIAGAKYRGDFEERLKSILKEVQDAEGQVVMFIDEIHTVVGA 130 >5UJ7-C nrPDB Length = 436 Score = 34.4 bits (77), Expect = 0.085, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 44/130 (33%), Gaps = 19/130 (14%) Query: 43 DHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERG 102 H +LK+T +L GP G+GKT I KEL + + +L+++ + Sbjct: 45 KHLSELLKRTALHGESNSVLIIGPRGSGKTMLINHALKELMEIEEVSENVLQVHLNGLLQ 104 Query: 103 ISIVREKVKNFARL---------TVSKPSKHDLENYPCPPYK---------IIILDEADS 144 I+ + +K R V +L K I ILDE D Sbjct: 105 IN-DKIALKEITRQLNLENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDL 163 Query: 145 MTADAQSALR 154 L Sbjct: 164 FAHHKNQTLL 173 >5UJ7-A nrPDB Length = 391 Score = 34.0 bits (76), Expect = 0.093, Method: Composition-based stats. Identities = 47/287 (16%), Positives = 99/287 (34%), Gaps = 36/287 (12%) Query: 43 DHAVTVLKKTLKSANLPH----MLFYGPPGTGKTSTIL----ALTKELYGPDLMKSRILE 94 + + ++S L H M G PGTGKT+T+ L + D+ + +E Sbjct: 38 EQEFQDIYNFVESKLLDHTGGCMYISGVPGTGKTATVHEVIRCLQQAAQANDVPPFQYIE 97 Query: 95 LNA---SDERGISIV----REKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTA 147 +N ++ + + K A +K ++++DE D + Sbjct: 98 VNGMKLTEPHQVYVQILQKLTGQKATANHAAELLAKQFCTRGSPQETTVLLVDELDLLWT 157 Query: 148 DAQSALRRTMETYS-GVTRFCL--ICNYVTRIIDPLASRCS------KFRFKALDASNAI 198 Q + + + R + I N + + +R S + F+ S Sbjct: 158 HKQDIMYNLFDWPTHKEARLVVLAIANTMDLPERIMMNRVSSRLGLTRMCFQPYTYSQLQ 217 Query: 199 DRLRFISEQENVKCDDGVLERILDISA---GDLRRGITLLQSASKGAQYLGDGKNITSTQ 255 LR + +D ++ + A GD RR + + + A++ ++ + S Sbjct: 218 QILRSRLKHLK-AFEDDAIQLVARKVAALSGDARRCLDICRRATEICEF--SQQKPDSPG 274 Query: 256 VEELA---GVVPHDILIEIVEKVKSGDFDE---IKKYVNTFMKSGWS 296 + +A V + +K+ E ++ + F +SG Sbjct: 275 LVTIAHSMEAVDEMFSSSYITAIKNSSVLEQSFLRAILAEFRRSGLE 321 >4XGC-A nrPDB Length = 393 Score = 34.0 bits (76), Expect = 0.094, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 90/259 (34%), Gaps = 25/259 (9%) Query: 7 PNKKRKISKLAAEQSLAQQPWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGP 66 P K S+L + V K P E ++ L+ ++ M G Sbjct: 12 PAKDSSKSELQLAREQLHVSVVPKSLPCREREF---ENIYAFLEGKIQDQCGGCMYVSGV 68 Query: 67 PGTGKTSTI---------LALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLT 117 PGTGKT+T+ +A EL + ++ + L + + I ++ Sbjct: 69 PGTGKTATVTGVIRTLQRMAKQNELPAFEYLEINGMRLTEPRQAYVQIYKQLTGKTVSWE 128 Query: 118 VSKPSKHDLENYPCPPY--KIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTR 175 + P P ++++DE D + Q + ++ + ++ Sbjct: 129 QAHALLEKRFTTPAPRRVTTVLLVDELDILCNRRQDVVYNLLDWPTKSAAKLVVVTIANT 188 Query: 176 IIDP-------LASR--CSKFRFKALDASNAIDRLR-FISEQENVKCDD-GVLERILDIS 224 + P + SR ++ F+ + + + E K + ++ R + Sbjct: 189 MDLPERLLMGKVTSRLGLTRLTFQPYSHKQLQEIVTARLGGSETFKGEAVQLVARKVAAV 248 Query: 225 AGDLRRGITLLQSASKGAQ 243 +GD RR + + + A++ A Sbjct: 249 SGDARRALDICRRATEIAD 267 >6J5T-G nrPDB Length = 852 Score = 34.0 bits (76), Expect = 0.10, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 41/111 (36%), Gaps = 6/111 (5%) Query: 38 EVTAQDHAVTVLKKTLKSANLPHML---FYGPPGTGKTSTILALTKELYGPDLMKSRILE 94 +V + +K+ L +N +L F G G GKT+ + + + RI Sbjct: 159 QVVGLEGDKRKIKEWLFRSNDSQLLIMAFVGMGGLGKTTIAQEVFNDKEIEHRFERRIWV 218 Query: 95 LNASDERGISIVREKVKNFARLTVSKPSKHDL---ENYPCPPYKIIILDEA 142 + I+R ++N +V L + Y +I++D+ Sbjct: 219 SVSQTFTEEQIMRSILRNLGDASVGDDIGTLLRKIQQYLLGKRYLIVMDDV 269 >2I3B-A nrPDB Length = 189 Score = 34.0 bits (76), Expect = 0.11, Method: Composition-based stats. Identities = 9/17 (52%), Positives = 11/17 (64%) Query: 60 HMLFYGPPGTGKTSTIL 76 H+ GPPG GKT+ I Sbjct: 3 HVFLTGPPGVGKTTLIH 19 >2YVU-A nrPDB Length = 186 Score = 33.6 bits (75), Expect = 0.12, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 35/97 (36%), Gaps = 5/97 (5%) Query: 63 FYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPS 122 G PG+GKT+ L +L + + +L+ + + V E + Sbjct: 18 LTGLPGSGKTTIATRLA-DLLQKEGYRVEVLD----GDWARTTVSEGAGFTREERLRHLK 72 Query: 123 KHDLENYPCPPYKIIILDEADSMTADAQSALRRTMET 159 + +I++ S A++ +RR +E Sbjct: 73 RIAWIARLLARNGVIVICSFVSPYKQARNMVRRIVEE 109 >1G8P-A nrPDB Length = 350 Score = 33.3 bits (74), Expect = 0.15, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 1/52 (1%) Query: 29 EKYRPK-NLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALT 79 K RP + Q+ L T + +L +G GTGK++ + AL Sbjct: 15 AKTRPVFPFSAIVGQEDMKLALLLTAVDPGIGGVLVFGDRGTGKSTAVRALA 66 >1UM8-A nrPDB Length = 376 Score = 33.3 bits (74), Expect = 0.16, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 32/91 (35%), Gaps = 10/91 (10%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 +L GP G+GKT L K L P + A V +++ Sbjct: 75 ILLIGPTGSGKTLMAQTLAKHLDIPIAISDATSLTEA----------GYVGEDVENILTR 124 Query: 121 PSKHDLENYPCPPYKIIILDEADSMTADAQS 151 + N I+ +DE D ++ +++ Sbjct: 125 LLQASDWNVQKAQKGIVFIDEIDKISRLSEN 155 >5V8F-A nrPDB Length = 913 Score = 32.9 bits (73), Expect = 0.21, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 42/113 (37%), Gaps = 12/113 (10%) Query: 51 KTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKS----RILELNA------SDE 100 ++S + + G PG GKT T+ + KEL + +E+N +D Sbjct: 465 SAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDC 524 Query: 101 RGISIVREKVKNFARLTVSKPSKHDLENYPCPPYK--IIILDEADSMTADAQS 151 + + + + + P K +++LDE D+M +Q Sbjct: 525 YETLWNKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKSQD 577 >6AMN-A nrPDB Length = 349 Score = 32.9 bits (73), Expect = 0.22, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 42/125 (33%), Gaps = 5/125 (4%) Query: 28 VEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDL 87 E+ R LD V ++ + + L + G PG GKT+ I + + + D+ Sbjct: 172 TEQARQGKLDPVIGREEEIRSTIRVLARRIKSNPCLIGEPGIGKTAIIEGVAQRIIDDDV 231 Query: 88 MKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKII-ILDEADSMT 146 L + + + + + K L+ I+ +DE + Sbjct: 232 PTI----LQGAKLFSLDLAALTAGAKYKGDFEERFKGVLKEIEESKTLIVLFIDEIHMLM 287 Query: 147 ADAQS 151 + + Sbjct: 288 GNGKD 292 >5J40-A nrPDB Length = 372 Score = 32.9 bits (73), Expect = 0.23, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 63/179 (35%), Gaps = 20/179 (11%) Query: 19 EQSLAQQPWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILAL 78 EQ +A W+ P+ + + ++ K + LF GP +GKT+ AL Sbjct: 130 EQYMAGVAWIHCLLPQM--DTVIYEFLKCIVLNIPKKR---YWLFKGPIDSGKTTLAAAL 184 Query: 79 TKELYGPDLMKSRILE-LNASDERGIS---IVREKVKNFARLTVSKPSKHDLENYPCPPY 134 G L + LE LN GI +V E VK + PS H + N C Sbjct: 185 LDLCGGKSLNVNMPLERLNFELGVGIDQFMVVFEDVKGTGAESRDLPSGHGISNLDCLR- 243 Query: 135 KIIILDEADSMTADAQSAL-RRTMETYSGVTRFCLICNYVTRIIDPLASR-CSKFRFKA 191 D + + L R+ + V ++ + L +R + F+ Sbjct: 244 --------DYLDGSVKVNLERKHQNKRTQVFPPGIVTMNEYSVPRTLQARFVRQIDFRP 294 >1Y63-A nrPDB Length = 184 Score = 32.9 bits (73), Expect = 0.24, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 27/74 (36%), Gaps = 2/74 (2%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRIL--ELNASDERGISIVREKVKNFARLTV 118 +L G PGTGKTS + EL G ++ L E + E + ++ + Sbjct: 13 ILITGTPGTGKTSMAEMIAAELDGFQHLEVGKLVKENHFYTEYDTELDTHIIEEKDEDRL 72 Query: 119 SKPSKHDLENYPCP 132 + + + Sbjct: 73 LDFMEPIMVSRGNH 86 >5JZV-A nrPDB Length = 206 Score = 32.9 bits (73), Expect = 0.24, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 13/23 (56%) Query: 58 LPHMLFYGPPGTGKTSTILALTK 80 LP++L G PG GKT+ L Sbjct: 37 LPNILLTGTPGVGKTTLGKELAS 59 >3IIK-A nrPDB Length = 180 Score = 32.5 bits (72), Expect = 0.27, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 13/23 (56%) Query: 58 LPHMLFYGPPGTGKTSTILALTK 80 LP++L G PG GKT+ L Sbjct: 11 LPNILLTGTPGVGKTTLGKELAS 33 >1V43-A nrPDB Length = 372 Score = 32.5 bits (72), Expect = 0.27, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 2/46 (4%) Query: 34 KNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALT 79 +NL + AV L T+K ++ GP G GKT+T+ + Sbjct: 15 ENLTKRFGNFTAVNKLNLTIKDGEF--LVLLGPSGCGKTTTLRMIA 58 >4YMS-J nrPDB Length = 240 Score = 32.5 bits (72), Expect = 0.29, Method: Composition-based stats. Identities = 41/263 (15%), Positives = 94/263 (35%), Gaps = 33/263 (12%) Query: 36 LDEVTAQDHAVTVLKK-TLKSANLPHMLFYGPPGTGKTSTILA--LTKELYGPDLMKSRI 92 +++V ++ VLK TLK ++ GP G+GK++ + L +E ++ + Sbjct: 4 VNDVYKNFGSLEVLKGVTLKVNKGEVVVIIGPSGSGKSTLLRCINLLEEPTKGEVFIDGV 63 Query: 93 LELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILD--EADSMTAD-- 148 N I+ VR+KV + P +EN P K+ ++ EA+ + D Sbjct: 64 KINNGKV--NINKVRQKVGMVFQHFNLFPHLTAIENITLAPVKVKKMNKKEAEELAVDLL 121 Query: 149 AQSALRRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASNAIDRLRFISEQE 208 A+ L + Y + I LA + F + Sbjct: 122 AKVGLLDKKDQYP--IKLSGGQKQRLAIARALAMQPEVMLFDEPTS-------------- 165 Query: 209 NVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNITSTQVEELAGVVPHDIL 268 D +++ +L++ +++ + +G + + + GV+ + Sbjct: 166 --ALDPEMVKEVLNV----MKQLANEGMTMVVVTHEMGFAREVGDRVIFMDDGVIVEEGT 219 Query: 269 IEIVEKVKSGDFDEIKKYVNTFM 291 E + + +++++ + Sbjct: 220 PEEIFYRAKN--ERTREFLSKIL 240 >4HSE-A nrPDB Length = 397 Score = 32.5 bits (72), Expect = 0.33, Method: Composition-based stats. Identities = 41/321 (12%), Positives = 97/321 (30%), Gaps = 46/321 (14%) Query: 36 LDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILEL 95 LD V +D + + + L + + G PG GKT+ + L + + D+ + Sbjct: 32 LDPVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGL---- 87 Query: 96 NASDERGISIVREKVKN-FARLTVSKPSKHDLEN-----YPCPPYKIIILDEADSMTADA 149 +G IV ++ + A + L+ I+ +DE ++ Sbjct: 88 -----KGKRIVSLQMGSLLAGAKYRGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAG 142 Query: 150 QSALRRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASNAIDRLRFISEQEN 209 ++ ++ P +R A + + + + Sbjct: 143 KAE----------------GAVDAGNMLKPALARGELRLIGATTLDEYREIEKDPALERR 186 Query: 210 VKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNITSTQVEELAGVVPHDILI 269 + + + + I++L+ + + G I+ + + A + I Sbjct: 187 FQP--------VYVDEPTVEETISILRGLKEKYEVH-HGVRISDSAIIAAATLSHRYITE 237 Query: 270 EIVEKVKSGDFDEIKKYVNTFMKSGWSAASVVNQLHEYYITNDNFDTNFKNQISWLLFTT 329 + DE + ++ SA ++ L + + K + Sbjct: 238 RRLPDKAIDLIDEAAARLRMALE---SAPEEIDALERKKLQLEIEREALKK---EKDPDS 291 Query: 330 DSRLNNGTNEHIQLLNLLVKI 350 RL E +L + K+ Sbjct: 292 QERLKAIEAEIAKLTEEIAKL 312 >3JC7-2 nrPDB Length = 868 Score = 32.1 bits (71), Expect = 0.33, Method: Composition-based stats. Identities = 34/234 (14%), Positives = 69/234 (29%), Gaps = 42/234 (17%) Query: 136 IIILDEADSMTADAQSALRRTMETYSGV-------------TRFCLICNYVTR------- 175 + ++DE D M ++++ ME S N Sbjct: 603 VCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLQARCSIIAAANPNGGRYNSTLP 662 Query: 176 ------IIDPLASR----CSKFRFKALDASNAIDRLRFISEQENVK-CDDGVLERILDIS 224 + +P+ SR C + L A +RL +V+ + +R + Sbjct: 663 LAQNVSLTEPILSRFDILCVV---RDLVDEEADERLATFVVDSHVRSHPENDEDREGEEL 719 Query: 225 AGDLRRGI--------TLLQSASKGAQYLGDGKNITSTQVEELAGVVPHDILIEIVEKVK 276 + I L + + Q + S +EL H +I K+ Sbjct: 720 KNNGESAIEQGEDEINEQLNARQRRLQRQRKKEEEISPIPQELLMKYIHYARTKIYPKLH 779 Query: 277 SGDFDEIKKYVNTFMKSGWSAASVVNQLHEYYITNDNFDTNFKNQISWLLFTTD 330 D D++ + + S S + ++ K ++S + + D Sbjct: 780 QMDMDKVSRVYADLRRESISTGSFPITVRHLESILRIAESFAKMRLSEFVSSYD 833 >5X06-E nrPDB Length = 253 Score = 32.1 bits (71), Expect = 0.39, Method: Composition-based stats. Identities = 33/228 (14%), Positives = 77/228 (33%), Gaps = 32/228 (14%) Query: 42 QDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDER 101 + L+ L+ + ++ + G G++ + A EL + D+R Sbjct: 47 NSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACAELSQRGDAVGYVPL----DKR 102 Query: 102 GISI--VREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMET 159 + V + +++ + + + + I DE M R +E Sbjct: 103 TWFVPEVLDGMEHLSLVCIDNI-------------ECIAGDELWEM--AIFDLYNRILE- 146 Query: 160 YSGVTRFCLICNYV----TRIIDPLASRC---SKFRFKALDASNAIDRLRFISEQENVKC 212 SG TR + + + LASR ++ + L + + L+ + + Sbjct: 147 -SGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFEL 205 Query: 213 DDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNITSTQVEELA 260 + V +L ++R L + + + + +T V+E+ Sbjct: 206 PEDVGRFLLKRLDREMRTLFMTLDQLDRAS--ITAQRKLTIPFVKEIL 251 >3J15-B nrPDB Length = 593 Score = 31.7 bits (70), Expect = 0.45, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 31/81 (38%), Gaps = 14/81 (17%) Query: 33 PKNLDE-VTA----QDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDL 87 P+ LDE + L +K + ++ GP GTGKT+ + L +L Sbjct: 76 PEQLDEDCVHRYGVNAFVLYRLP-IVKDGMVVGIV--GPNGTGKTTAVKILAGQLI---- 128 Query: 88 MKSRILELNASDERGISIVRE 108 + E N S + I R Sbjct: 129 --PNLCEDNDSWDNVIRAFRG 147 >1J8M-F nrPDB Length = 297 Score = 31.7 bits (70), Expect = 0.53, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 44/121 (36%), Gaps = 12/121 (9%) Query: 55 SANLPH-MLFYGPPGTGKTSTILALTK---------ELYGPDLMKSRILELNASDERGIS 104 +P+ ++ G GTGKT+T L L G D+ + LE + I Sbjct: 94 PDKIPYVIMLVGVQGTGKTTTAGKLAYFYKKKGFKVGLVGADVYRPAALEQLQQLGQQIG 153 Query: 105 IVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVT 164 + V +K +E + +III+D A ++AL M+ Sbjct: 154 VPVYG--EPGEKDVVGIAKRGVEKFLSEKMEIIIVDTAGRHGYGEEAALLEEMKNIYEAI 211 Query: 165 R 165 + Sbjct: 212 K 212 >4YER-A nrPDB Length = 328 Score = 31.3 bits (69), Expect = 0.61, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 6/77 (7%) Query: 34 KNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPD----LMK 89 +NL + AV + ++K + F GP G GKT+TI LT L + Sbjct: 9 ENLVKKFGDFEAVKGVSFSVKKGEI--FAFLGPNGAGKTTTIHMLTTLLKPTSGKAWVAG 66 Query: 90 SRILELNASDERGISIV 106 +L+ R I IV Sbjct: 67 HDVLKEPREVRRKIGIV 83 >2WJV-A nrPDB Length = 800 Score = 31.3 bits (69), Expect = 0.61, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 41/129 (31%), Gaps = 38/129 (29%) Query: 59 PHMLFYGPPGTGKT----STILALTKELYGPDL------------------MKSRILELN 96 P L GPPGTGKT + + L ++ GP L +++ L Sbjct: 372 PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLC 431 Query: 97 ASDERGIS------IVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQ 150 A I + +++N + + + + E S Sbjct: 432 AKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETG----------ELSSADEKRY 481 Query: 151 SALRRTMET 159 AL+RT E Sbjct: 482 RALKRTAER 490 >6MHU-A nrPDB Length = 251 Score = 31.3 bits (69), Expect = 0.65, Method: Composition-based stats. Identities = 38/168 (22%), Positives = 62/168 (36%), Gaps = 24/168 (14%) Query: 34 KNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALT------KELYGPDL 87 KNL + V + T+ S + +L GP G GKT+T + D Sbjct: 17 KNLAKAYKGRRVVEDVSLTVNSGEIVGLL--GPNGAGKTTTFYMVVGIVPRDAGNIIIDD 74 Query: 88 MKSRILELNASDERGISIVREKVKNFARLTVSKP------SKHDLENYPCPPYKIIILDE 141 +L L+A RGI + ++ F RL+V + DL +++E Sbjct: 75 DDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEE 134 Query: 142 A------DSMTADAQSALRRTME---TYSGVTRFCLICNYVTRIIDPL 180 DSM RR +E + +F L+ + +DP+ Sbjct: 135 FHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILL-DEPFAGVDPI 181 >1P4S-A nrPDB Length = 181 Score = 31.3 bits (69), Expect = 0.65, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 31/73 (42%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSK 120 +L GPPG GK + + L ++L P + + N + + + ++ + L S Sbjct: 3 VLLLGPPGAGKGTQAVKLAEKLGIPQISTGELFRRNIEEGTKLGVEAKRYLDAGDLVPSD 62 Query: 121 PSKHDLENYPCPP 133 + +++ P Sbjct: 63 LTNELVDDRLNNP 75 >5M7N-A nrPDB Length = 454 Score = 30.9 bits (68), Expect = 0.73, Method: Composition-based stats. Identities = 39/260 (15%), Positives = 85/260 (32%), Gaps = 48/260 (18%) Query: 38 EVTAQDHAVTVLKKTLK--SANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILEL 95 E+ A+ L++T++ + ++ GP G GK A+ + + + Sbjct: 142 ELVGTSLAMNQLRQTIERVAPTNSRIMITGPSGAGKELVARAIHAQ---SSRANGPFVTV 198 Query: 96 NASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRR 155 NA+ +I E+++ T + + I+ LDE M + Q+ + R Sbjct: 199 NAA-----TITPERMEIELFGTEMDGGERKVGALEEAHGGILYLDEVADMPRETQNKILR 253 Query: 156 TM-----ETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASNAIDRLR-------- 202 + E G R + ++ L ++ F+ + RL Sbjct: 254 VLVDQQFERVGGTKRVKVDVRIISSTAQNLEGMIAEGTFR----EDLFHRLSVVPVQVPA 309 Query: 203 -----------------FISEQENVKCDDGVLERILDISA----GDLRRGITLLQSASKG 241 I+EQ +K + + + A G+LR+ ++ Sbjct: 310 LAARREDIPSLVEFFMKQIAEQAGIKPRKIGPDAMAVLQAHSWPGNLRQLRNNVERLMIL 369 Query: 242 AQYLGDGKNITSTQVEELAG 261 + + +T+ + G Sbjct: 370 TRGDDPDELVTADLLPAEIG 389 >4OI0-A nrPDB Length = 431 Score = 30.9 bits (68), Expect = 0.76, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 39/106 (36%), Gaps = 10/106 (9%) Query: 55 SANLPHMLFYGPPGTGKTSTILALT----KELYGPDLMKSRILELNASDERGISIVREK- 109 A P +L GP GKT+ L ++ P ++ + + + S ++ V + Sbjct: 114 KAKGPRLLLVGPTDVGKTTVSRILCNYSVRQGRTPIFVELDVGQNSVSVPGTVAAVLVQK 173 Query: 110 ----VKNFAR-LTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQ 150 + F R + H + Y+ + + A ++ A Q Sbjct: 174 TADVIDGFERNQPIVFNFGHTSPSANLSLYEALFKEMATTLNAQIQ 219 >1SGW-A nrPDB Length = 214 Score = 30.9 bits (68), Expect = 0.80, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 43/103 (41%), Gaps = 8/103 (7%) Query: 45 AVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALT---KELYGPDLMKSRILELNASDER 101 + + T++ N+ + F+GP G GKT+ + ++ K L G + + + Sbjct: 24 VLERITMTIEKGNV--VNFHGPNGIGKTTLLKTISTYLKPLKGEIIYNGVPI---TKVKG 78 Query: 102 GISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADS 144 I + E++ +++V K Y K I+D +S Sbjct: 79 KIFFLPEEIIVPRKISVEDYLKAVASLYGVKVNKNEIMDALES 121 >1YE8-A nrPDB Length = 178 Score = 30.9 bits (68), Expect = 0.83, Method: Composition-based stats. Identities = 20/149 (13%), Positives = 43/149 (28%), Gaps = 27/149 (18%) Query: 61 MLFYGPPGTGKTSTILALTKEL--YGPDLMKSRILELNASDERGISIVREKVKN------ 112 ++ G PG GKT+ + + + L + + G I+ + K Sbjct: 3 IIITGEPGVGKTTLVKKIVERLGKRAIGFWTEEVRDPETKKRTGFRIITTEGKKKIFSSK 62 Query: 113 -FARLTVSKP---------------SKHDLENYPCPPYKIIILDEADSM---TADAQSAL 153 F + + K+II+DE M + + + Sbjct: 63 FFTSKKLVGSYGVNVQYFEELAIPILERAYREAKKDRRKVIIIDEIGKMELFSKKFRDLV 122 Query: 154 RRTMETYSGVTRFCLICNYVTRIIDPLAS 182 R+ M + + V ++ + Sbjct: 123 RQIMHDPNVNVVATIPIRDVHPLVKEIRR 151 >6EJ5-A nrPDB Length = 637 Score = 30.9 bits (68), Expect = 0.85, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 41/129 (31%), Gaps = 38/129 (29%) Query: 59 PHMLFYGPPGTGKT----STILALTKELYGPDL------------------MKSRILELN 96 P L GPPGTGKT + + L ++ GP L +++ L Sbjct: 209 PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLC 268 Query: 97 ASDERGIS------IVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQ 150 A I + +++N + + + + E S Sbjct: 269 AKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETG----------ELSSADEKRY 318 Query: 151 SALRRTMET 159 AL+RT E Sbjct: 319 RALKRTAER 327 >4U00-A nrPDB Length = 244 Score = 30.9 bits (68), Expect = 0.94, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 43/105 (40%), Gaps = 3/105 (2%) Query: 32 RPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSR 91 R +NL + H + + + ++ GP G+GK++ I + + L + Sbjct: 6 RIRNLHKWFGPLHVLKGIHLEVAPG--EKLVIIGPSGSGKSTLIRTINR-LEDFQEGEVV 62 Query: 92 ILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKI 136 + L+ D+R + +R +V + P LEN P ++ Sbjct: 63 VDGLSVKDDRALREIRREVGMVFQQFNLFPHMTVLENVTLAPMRV 107 >3NXS-A nrPDB Length = 329 Score = 30.9 bits (68), Expect = 0.95, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 54 KSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNF 113 ++ + H+ G PG GK++TI AL L + +L ++ S R + Sbjct: 53 EAGSAMHVGITGVPGVGKSTTIEALGMHLI-EAGHRVAVLAVDPSSTRTGGSILGDKTRM 111 Query: 114 ARLTV 118 ARL V Sbjct: 112 ARLAV 116 >3TK1-A nrPDB Length = 330 Score = 30.6 bits (67), Expect = 0.98, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 1/70 (1%) Query: 49 LKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVRE 108 L+ + H+ G PG GK+++I AL L + +L ++ S R + Sbjct: 47 LELMPDAGRAMHVGITGVPGVGKSTSIEALGMHLI-EQGHRVAVLAVDPSSVRSGGSILG 105 Query: 109 KVKNFARLTV 118 ARL V Sbjct: 106 DKTRMARLAV 115 >2FZ4-A nrPDB Length = 237 Score = 30.6 bits (67), Expect = 0.99, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 47/122 (38%), Gaps = 12/122 (9%) Query: 37 DEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELN 96 E++ +D+ L++ L +L P G+GKT +A EL P L+ L L Sbjct: 90 AEISLRDYQEKALERWLVDKRGCIVL---PTGSGKTHVAMAAINELSTPTLIVVPTLALA 146 Query: 97 AS--------DERGISIVREKVKNFARLTVSKPSKHDLENYPCP-PYKIIILDEADSMTA 147 E + ++K LTVS + + ++I DE + A Sbjct: 147 EQWKERLGIFGEEYVGEFSGRIKELKPLTVSTYDSAYVNAEKLGNRFMLLIFDEVHHLPA 206 Query: 148 DA 149 ++ Sbjct: 207 ES 208 >1G29-1 nrPDB Length = 372 Score = 30.6 bits (67), Expect = 1.0, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Query: 44 HAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILE-LNASDERG 102 V + +L+ + M+ GP G GKT+T+ + L P + I + L A E+G Sbjct: 15 EVTAVREMSLEVKDGEFMILLGPSGCGKTTTLRMIA-GLEEPSRGQIYIGDKLVADPEKG 73 Query: 103 ISIVREK 109 I + + Sbjct: 74 IFVPPKD 80 >4B3F-X nrPDB Length = 646 Score = 30.6 bits (67), Expect = 1.1, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 2/46 (4%) Query: 33 PKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILAL 78 P + L L + +GPPGTGKT+T++ + Sbjct: 182 PLTFFNTCLDTSQKEAVLFALSQKEL--AIIHGPPGTGKTTTVVEI 225 >3CM0-A nrPDB Length = 186 Score = 30.6 bits (67), Expect = 1.1, Method: Composition-based stats. Identities = 13/33 (39%), Positives = 17/33 (51%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRIL 93 ++F GPPG GK + L +EL L IL Sbjct: 7 VIFLGPPGAGKGTQASRLAQELGFKKLSTGDIL 39 >1VPL-A nrPDB Length = 256 Score = 30.6 bits (67), Expect = 1.1, Method: Composition-based stats. Identities = 13/94 (13%), Positives = 38/94 (40%), Gaps = 6/94 (6%) Query: 34 KNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGP----DLMK 89 K+L + + + + ++ + ++ GP G GKT+T+ ++ + + Sbjct: 19 KDLRKRIGKKEILKGISFEIEEGEIFGLI--GPNGAGKTTTLRIISTLIKPSSGIVTVFG 76 Query: 90 SRILELNASDERGISIVREKVKNFARLTVSKPSK 123 ++E + IS + E+ + + + + Sbjct: 77 KNVVEEPHEVRKLISYLPEEAGAYRNMQGIEYLR 110 >1OFI-A nrPDB Length = 310 Score = 30.2 bits (66), Expect = 1.3, Method: Composition-based stats. Identities = 31/187 (16%), Positives = 56/187 (29%), Gaps = 39/187 (20%) Query: 44 HAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGI 103 L+ + N+ L GP G GKT L K L + +++ A+ + Sbjct: 39 QLQEPLRHEVTPKNI---LMIGPTGVGKTEIARRLAK------LANAPFIKVEATKFTEV 89 Query: 104 SIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTA------------DAQS 151 V ++V + R I+ +DE D + Q Sbjct: 90 GYVGKEVDSIIRDLTDSAGGAIDAVEQNG---IVFIDEIDKICKKGEYSGADVSREGVQR 146 Query: 152 ALRRTMETYSGVTRFCLICNY--------------VTRIIDPLASRC-SKFRFKALDASN 196 L +E + T+ ++ + +I L R + AL A++ Sbjct: 147 DLLPLVEGSTVSTKHGMVKTDHILFIASGAFQVARPSDLIPELQGRLPIRVELTALSAAD 206 Query: 197 AIDRLRF 203 L Sbjct: 207 FERILTE 213 >4A2W-A nrPDB Length = 936 Score = 30.2 bits (66), Expect = 1.4, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 49/139 (35%), Gaps = 17/139 (12%) Query: 99 DERGISIVREKVKNFAR-LTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTM 157 D + IS VRE ++ R + + ++ P+ II + AL RT+ Sbjct: 440 DIQAISTVRENIQELQRFMNKPEIDVRLVKRRIHNPFAAIISN-----LMSETEALMRTI 494 Query: 158 ---ETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASNAIDRLRFISEQE------ 208 +T S ++ I +C + + + + I R FI + Sbjct: 495 AYVDTLSQNSKKDFGTQNYEHWIVVTQRKCRLLQLEDKEEESRICRALFICTEHLRKYND 554 Query: 209 --NVKCDDGVLERILDISA 225 + D +++ + ++ Sbjct: 555 ALIISEDARIIDALSYLTE 573 >4CVN-A nrPDB Length = 191 Score = 30.2 bits (66), Expect = 1.5, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 52/158 (32%), Gaps = 6/158 (3%) Query: 63 FYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGIS-IVREKVKNFARLTVSKP 121 G PG GKT+ L ++L G + + R L R + V ++ A V K Sbjct: 16 ITGTPGVGKTTIAKLLAEKL-GYEYVNLRDFALEKGCGREVDGEVEVEIDELA-YFVEKE 73 Query: 122 SKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLA 181 K ++ +D + A + R E G ++ + N ++D + Sbjct: 74 LKDRNVVLDGHLSHLMPVDLVVVLRAHPRIIGERLRER--GYSKEKIGENVEAELVDAIL 131 Query: 182 SRCSKFRFKALDASNAIDRLRFISEQENVKCDDGVLER 219 ++ I E E + ++R Sbjct: 132 IEAIDEHENVIEVDTTNKTPEEIVE-EIIGLIKSGVKR 168 >3FFY-A nrPDB Length = 115 Score = 29.8 bits (65), Expect = 1.7, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 19/112 (16%) Query: 2 FEGFGPNKKRKISKLAAEQSLAQQPWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHM 61 FEGF P KK +++KL + V+++R E + + L + + Sbjct: 22 FEGFLPQKKGRMTKL--------KSLVDEHRTMVFYE--SPHRLLKTLTQFAE------- 64 Query: 62 LFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERG-ISIVREKVKN 112 ++GP S ++ E + I A+D RG I IV + + Sbjct: 65 -YFGPERQVSVSREISKIHEETVRGTLSELIEHFTATDPRGEIVIVLAGIDD 115 >5DXT-A nrPDB Length = 962 Score = 29.8 bits (65), Expect = 1.7, Method: Composition-based stats. Identities = 22/159 (13%), Positives = 55/159 (34%), Gaps = 14/159 (8%) Query: 84 GPDLMKSRILELNASDERGISIVREKVKNFA-RLTVSKPSKHDLENYPCPPYKIIILDEA 142 G + + A D +E++K + R +S+ ++ + + + + + E Sbjct: 399 GFSYSHAGLSNRLARDNELRENDKEQLKAISTRDPLSEITEQEKDFLWSHRHYCVTIPEI 458 Query: 143 --DSMTADAQSALRRTMETY----------SGVTRFCLICNYVTRIIDPLASRCSKFRFK 190 + + ++ + Y L CNY ++ A RC + Sbjct: 459 LPKLLLSVKWNSRDEVAQMYCLVKDWPPIKPEQAMELLDCNYPDPMVRGFAVRCLEKYLT 518 Query: 191 ALDASNAIDRLRFISEQENVKCDDGVLERILDISAGDLR 229 S + +L + + E D+ ++ +L + + R Sbjct: 519 DDKLSQYLIQLVQVLKYEQY-LDNLLVRFLLKKALTNQR 556 >2FWR-A nrPDB Length = 472 Score = 29.8 bits (65), Expect = 1.7, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 74/214 (34%), Gaps = 22/214 (10%) Query: 37 DEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELN 96 E++ +D+ L++ L +L P G+GKT +A EL P L+ L L Sbjct: 90 AEISLRDYQEKALERWLVDKRGCIVL---PTGSGKTHVAMAAINELSTPTLIVVPTLALA 146 Query: 97 AS--------DERGISIVREKVKNFARLTVSKPSKHDLENYPCP-PYKIIILDEADSMTA 147 E + ++K LTVS + + ++I DE + A Sbjct: 147 EQWKERLGIFGEEYVGEFSGRIKELKPLTVSTYDSAYVNAEKLGNRFMLLIFDEVHHLPA 206 Query: 148 DA--QSALRRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFRF------KALDASNAID 199 ++ Q A G+T + I+ + F K L Sbjct: 207 ESYVQIAQMSIAPFRLGLTATFEREDGRHEILKEVVGGKVFELFPDSLAGKHLAKYTIKR 266 Query: 200 RLRFISEQENVKCD--DGVLERILDISAGDLRRG 231 ++E E V+ + + V ++ L LRR Sbjct: 267 IFVPLAEDERVEYEKREKVYKQFLRARGITLRRA 300 >4A2Q-A nrPDB Length = 797 Score = 29.8 bits (65), Expect = 1.8, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 49/139 (35%), Gaps = 17/139 (12%) Query: 99 DERGISIVREKVKNFAR-LTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTM 157 D + IS VRE ++ R + + ++ P+ II + AL RT+ Sbjct: 440 DIQAISTVRENIQELQRFMNKPEIDVRLVKRRIHNPFAAIISN-----LMSETEALMRTI 494 Query: 158 ---ETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASNAIDRLRFISEQE------ 208 +T S ++ I +C + + + + I R FI + Sbjct: 495 YSVDTLSQNSKKDFGTQNYEHWIVVTQRKCRLLQLEDKEEESRICRALFICTEHLRKYND 554 Query: 209 --NVKCDDGVLERILDISA 225 + D +++ + ++ Sbjct: 555 ALIISEDARIIDALSYLTE 573 >4A36-A nrPDB Length = 556 Score = 29.8 bits (65), Expect = 2.0, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 49/139 (35%), Gaps = 17/139 (12%) Query: 99 DERGISIVREKVKNFAR-LTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTM 157 D + IS VRE ++ R + + ++ P+ II + AL RT+ Sbjct: 199 DIQAISTVRENIQELQRFMNKPEIDVRLVKRRIHNPFAAIISN-----LMSETEALMRTI 253 Query: 158 ---ETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASNAIDRLRFISEQE------ 208 +T S ++ I +C + + + + I R FI + Sbjct: 254 YSVDTLSQNSKKDFGTQNYEHWIVVTQRKCRLLQLEDKEEESRICRALFICTEHLRKYND 313 Query: 209 --NVKCDDGVLERILDISA 225 + D +++ + ++ Sbjct: 314 ALIISEDARIIDALSYLTE 332 >4U4P-B nrPDB Length = 247 Score = 29.4 bits (64), Expect = 2.2, Method: Composition-based stats. Identities = 31/232 (13%), Positives = 70/232 (30%), Gaps = 14/232 (6%) Query: 67 PGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKN---------FARLT 117 PGT + + +L +L+ L +N S + + + ++ K+ L Sbjct: 2 PGTQEETNFKSLVHDLFQKVEEAKSSLAMNRSRGKVLDAIIQEKKSGRIPGIYGRLGDLG 61 Query: 118 VSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRT---METYSGVTRFCLICNYVT 174 + C I++D D + + + L+R + T+ G+ + + +T Sbjct: 62 AIDEKYDVAISSCCHALDYIVVDSID-IAQECVNFLKRQNIGVATFIGLDKMAVWAKKMT 120 Query: 175 RIIDPLASRCSKFRFKALDASNAIDRLRFISEQENVKCDDGVLERILDISAGDLRRGITL 234 I P + F + F V + R+ R Sbjct: 121 EIQTP-ENTPRLFDLVKVKDEKIRQAFYFALRDTLVADNLDQATRVAYQKDRRWRVVTLQ 179 Query: 235 LQSASKGAQYLGDGKNITSTQVEELAGVVPHDILIEIVEKVKSGDFDEIKKY 286 Q + G G + ++ + + + +E D + + Sbjct: 180 GQIIEQSGTMTGGGSKVMKGRMGSSLVIEISEEEVNKMESQLQNDSKKAMQI 231 >1D2N-A nrPDB Length = 272 Score = 29.4 bits (64), Expect = 2.5, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 34/88 (38%), Gaps = 15/88 (17%) Query: 58 LPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLT 117 L +L GPP +GKT+ + +E +++ + D K+ F+ Sbjct: 64 LVSVLLEGPPHSGKTALAAKIAEE------SNFPFIKICSPD---------KMIGFSETA 108 Query: 118 VSKPSKHDLENYPCPPYKIIILDEADSM 145 + K ++ +++D+ + + Sbjct: 109 KCQAMKKIFDDAYKSQLSCVVVDDIERL 136 >3EC2-A nrPDB Length = 180 Score = 29.4 bits (64), Expect = 2.5, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 29/69 (42%), Gaps = 7/69 (10%) Query: 29 EKYRPKNLDEVTAQDHAVTVLKKTL---KSANLPHMLFYGPPGTGKTSTILALTKELYGP 85 + Y PKN +Q+ A+ ++ + + F G PG GKT +A K +Y Sbjct: 10 DTYHPKN----VSQNRALLTIRVFVHNFNPEEGKGLTFVGSPGVGKTHLAVATLKAIYEK 65 Query: 86 DLMKSRILE 94 ++ + Sbjct: 66 KGIRGYFFD 74 >2IUU-A nrPDB Length = 491 Score = 29.4 bits (64), Expect = 2.7, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 6/77 (7%) Query: 7 PNKKRKISKLAAEQSLAQQPWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGP 66 PN+ R++ + + S + + P L +T L A +PH+L G Sbjct: 169 PNEDRQMVRFSEVLSSPEYDEHKSTVPLALGHDIGGRPIITDL------AKMPHLLVAGT 222 Query: 67 PGTGKTSTILALTKELY 83 G+GK+ + A+ + Sbjct: 223 TGSGKSVGVNAMLLSIL 239 >2IUT-A nrPDB Length = 574 Score = 29.0 bits (63), Expect = 2.8, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 6/77 (7%) Query: 7 PNKKRKISKLAAEQSLAQQPWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGP 66 PN+ R++ + + S + + P L +T L A +PH+L G Sbjct: 169 PNEDRQMVRFSEVLSSPEYDEHKSTVPLALGHDIGGRPIITDL------AKMPHLLVAGT 222 Query: 67 PGTGKTSTILALTKELY 83 G+GK+ + A+ + Sbjct: 223 TGSGKSVGVNAMLLSIL 239 >4EUN-A nrPDB Length = 200 Score = 29.0 bits (63), Expect = 2.9, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 4/53 (7%) Query: 60 HMLFYGPPGTGKTSTILALTKELYGPDLMKSRIL---ELNASDERGISIVREK 109 H++ G G+GKT+ + E G + ++ E A+ +RGI + E Sbjct: 31 HVVVMGVSGSGKTTIAHGVADE-TGLEFAEADAFHSPENIATMQRGIPLTDED 82 >5FV0-A nrPDB Length = 517 Score = 29.0 bits (63), Expect = 2.9, Method: Composition-based stats. Identities = 27/149 (18%), Positives = 50/149 (33%), Gaps = 26/149 (17%) Query: 59 PHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTV 118 PH L G GKT+ + + + L + +L+ GI N +T Sbjct: 316 PHCLIVGQSRKGKTNVVKVILESLLVQEPESIGLLD-------GIDRGLAGYANRDDITY 368 Query: 119 SKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIID 178 + + + L+EAD++ Q R ++ + L V ++D Sbjct: 369 IEAKERLAQ----------WLNEADAVL---QQREREYIQAVNENRATTLAWPPVVFVVD 415 Query: 179 PLASRCSKFRFKALDASNAIDRLRFISEQ 207 L R + S R+ + +Q Sbjct: 416 SLL------RLQQETDSIMQGRIANMMKQ 438 >3MD0-A nrPDB Length = 355 Score = 29.0 bits (63), Expect = 2.9, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 1/65 (1%) Query: 54 KSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNF 113 S N + G PG GK++ I AL L + +L ++ S R + Sbjct: 75 DSGNAHRVGITGVPGVGKSTAIEALGMHLIERG-HRVAVLAVDPSSTRTGGSILGDKTRM 133 Query: 114 ARLTV 118 ARL V Sbjct: 134 ARLAV 138 >2XZL-A nrPDB Length = 802 Score = 29.0 bits (63), Expect = 2.9, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 3/69 (4%) Query: 59 PHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTV 118 P L GPPGTGKT T + L + K RIL + A + + K+++ V Sbjct: 376 PLSLIQGPPGTGKTVTSATIVYHL--SKIHKDRIL-VCAPSNVAVDHLAAKLRDLGLKVV 432 Query: 119 SKPSKHDLE 127 +K + Sbjct: 433 RLTAKSRED 441 >2AKY-A nrPDB Length = 220 Score = 29.0 bits (63), Expect = 3.1, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 61/173 (35%), Gaps = 19/173 (10%) Query: 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKN----FARL 116 M+ GPPG GK + L + + L +L + + + +K+ + + Sbjct: 7 MVLIGPPGAGKGTQAPNLQERFHAAHLATGDMLRSQIAKGTQLGLEAKKIMDQGGLVSDD 66 Query: 117 TVSKPSKHDLENYPCP---------PYKIIILDEADSMTADAQSALRRTMETYSGVTRFC 167 + K +L N P P I ++ D M + + L + +E V Sbjct: 67 IMVNMIKDELTNNPACKNGFILDGFPRTIPQAEKLDQMLKEQGTPLEKAIEL--KVDDEL 124 Query: 168 LICNYVTRIIDPLASRCSKFRFKALDASNAIDRLRFISEQENVKCDDGVLERI 220 L+ R+I P + R F + D ++ + V+ D + + Sbjct: 125 LVARITGRLIHPASGRSYHKIFNPP-KEDMKD---DVTGEALVQRSDDNADAL 173 >3SR0-A nrPDB Length = 206 Score = 29.0 bits (63), Expect = 3.1, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 13/21 (61%) Query: 61 MLFYGPPGTGKTSTILALTKE 81 ++F GPPG GK + L KE Sbjct: 3 LVFLGPPGAGKGTQAKRLAKE 23 >5D0U-A nrPDB Length = 714 Score = 29.0 bits (63), Expect = 3.1, Method: Composition-based stats. Identities = 47/299 (15%), Positives = 92/299 (30%), Gaps = 64/299 (21%) Query: 34 KNLDEVTAQDHAVTVLKKTLKSANLP------------H----MLFYGPPGTGKTSTI-- 75 +++ T Q H+ K LP H ++F G G+GKT+ I Sbjct: 14 SDINPWTGQRHSERYFKILKARRKLPVNKQRQEFLDLYHNNQILVFVGETGSGKTTQIPQ 73 Query: 76 LALTKEL----------YGPDLMKSRILELNASDERGISI-------VREKVKNFARLTV 118 L EL P + + + +DE + + +R + K ++ + Sbjct: 74 YVLYDELPHQTGKLIACTQPRRVAAMSVAQRVADELDVKLGEEVGYSIRFENKTSSKTLL 133 Query: 119 S-----KPSKHDLENYPCPPYKIIILDEAD--SMTADAQSALRRTMETYSGVTRFCLICN 171 + + + + Y IILDEA ++ D AL + + + ++ Sbjct: 134 KYMTDGQLLREAMHDRDMSRYSCIILDEAHERTLATDILMALLKQLSERRKDLKIIVMSA 193 Query: 172 -------YVTRIIDPLASRCSKFR----FKALDASN--AIDRLRFISEQENVKCDDGVLE 218 PL + + F +A +R + + + + +L Sbjct: 194 TLDAQKFQSYFFNAPLLAVPGRTHPVEIFYTPEAERDYVEAAIRTVLQIHACEPEGDILL 253 Query: 219 RIL--DISAGDLRRGITLLQSASKGAQYLGDGKNITSTQVEELAGVVPHDILIEIVEKV 275 + + RR + + + V L G +P I EK Sbjct: 254 FLTGEEEIEDACRRISLEVDEMIRESDAGPMS-------VYPLYGTLPPHQQQRIFEKA 305 >3OZX-A nrPDB Length = 538 Score = 29.0 bits (63), Expect = 3.3, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 29/98 (29%), Gaps = 11/98 (11%) Query: 65 GPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKH 124 G G GKT+ + L E+ N D E +K F + K Sbjct: 32 GKNGVGKTTVLKILAGEIIP-----------NFGDPNSKVGKDEVLKRFRGKEIYNYFKE 80 Query: 125 DLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSG 162 N +KI ++ A + + ++ Sbjct: 81 LYSNELKIVHKIQYVEYASKFLKGTVNEILTKIDERGK 118 Score = 28.3 bits (61), Expect = 4.8, Method: Composition-based stats. Identities = 8/20 (40%), Positives = 10/20 (50%) Query: 65 GPPGTGKTSTILALTKELYG 84 GP G GKT+ L E+ Sbjct: 301 GPNGIGKTTFARILVGEITA 320 >2YYZ-A nrPDB Length = 359 Score = 29.0 bits (63), Expect = 3.4, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 3/68 (4%) Query: 32 RPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSR 91 R NL + + AV + +K +L GP G GKT+T+L L +Y P + Sbjct: 5 RVVNLKKYFGKVKAVDGVSFEVKDGEFVALL--GPSGCGKTTTLLMLA-GIYKPTSGEIY 61 Query: 92 ILELNASD 99 ++ +D Sbjct: 62 FDDVLVND 69 >2BBW-A nrPDB Length = 246 Score = 29.0 bits (63), Expect = 3.5, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 2/50 (4%) Query: 55 SANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELN--ASDERG 102 ++ L + GPPG+GK + + + L L N AS E G Sbjct: 24 ASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKASTEVG 73 >4Y0A-A nrPDB Length = 179 Score = 28.6 bits (62), Expect = 4.1, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%) Query: 58 LPHMLFYGPPGTGKTSTILALTKELYGPDLMKSR 91 LP++ GP G GKT+ L EL G + + S Sbjct: 8 LPNIYLVGPMGAGKTTVGRHLA-ELLGREFLDSD 40 >2BDT-A nrPDB Length = 189 Score = 28.6 bits (62), Expect = 4.2, Method: Composition-based stats. Identities = 9/32 (28%), Positives = 16/32 (50%) Query: 62 LFYGPPGTGKTSTILALTKELYGPDLMKSRIL 93 + GP G GK++T L +L ++ I+ Sbjct: 6 IITGPAGVGKSTTCKRLAAQLDNSAYIEGDII 37 >5L3S-B nrPDB Length = 296 Score = 28.3 bits (61), Expect = 4.8, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Query: 34 KNLDEVTAQDHAVTVLKKTLKSANLPH-MLFYGPPGTGKTSTI 75 K++ E+ ++ +++K S P ++F+G G GKT+TI Sbjct: 76 KSITEILTKNQKTDLIEKIRSSGKKPFVIIFFGVNGVGKTTTI 118 >1U0J-A nrPDB Length = 267 Score = 28.3 bits (61), Expect = 5.2, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 37/101 (36%), Gaps = 8/101 (7%) Query: 9 KKRKISKLAAEQSLAQQPWVEK-----YRPKNLDEVTAQDHAVTVLKKTLKS-ANLPHML 62 K ++K A + + QQP + Y+ L+ Q A L K + Sbjct: 49 KIMSLTKTAPDYLVGQQPVEDISSNRIYKILELNGYDPQYAASVFLGWATKKFGKRNTIW 108 Query: 63 FYGPPGTGKTSTILALTKEL--YGPDLMKSRILELNASDER 101 +GP TGKT+ A+ + YG + N ++ Sbjct: 109 LFGPATTGKTNIAEAIAHTVPFYGCVNWTNENFPFNDCVDK 149 >3BIL-A nrPDB Length = 348 Score = 27.9 bits (60), Expect = 6.5, Method: Composition-based stats. Identities = 20/155 (12%), Positives = 53/155 (34%), Gaps = 7/155 (4%) Query: 172 YVTRIIDPLASRCSKFRFKALDASN-AIDRLRFISEQENVKCDDGVLERILDIS----AG 226 Y++ +D R FKA A++ ++L F+ E +G + + + AG Sbjct: 189 YLSGPMDTSTGRERLEDFKAACANSKIGEQLVFLGGYEQSVGFEGATKLLDQGAKTLFAG 248 Query: 227 DLRRGITLLQSASKGAQYLGDGKNITSTQVEELAGVVPHDILIEIVEKVKSGDFDEIKKY 286 D I ++++ K +G ++ L + PH + ++++ Sbjct: 249 DSMMTIGVIEACHKAGLVIGKDVSVIGFDTHPLFALQPHPLT--VIDQNVEQLAQRAVSI 306 Query: 287 VNTFMKSGWSAASVVNQLHEYYITNDNFDTNFKNQ 321 + + + + ++ + + Sbjct: 307 LTELIAGTVPSVTKTTIPTALIHRESIINSTLRKE 341 >2D62-A nrPDB Length = 375 Score = 27.9 bits (60), Expect = 6.7, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 4/70 (5%) Query: 41 AQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASD- 99 AV L +K ++ GP G GKT+T+ + L P + I + +D Sbjct: 17 GDVTAVKDLSLEIKDGEF--LVLLGPSGCGKTTTLRMIA-GLEEPTRGQIYIEDNLVADP 73 Query: 100 ERGISIVREK 109 E+G+ + ++ Sbjct: 74 EKGVFVPPKE 83 >3IBY-A nrPDB Length = 256 Score = 27.9 bits (60), Expect = 7.2, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 14/37 (37%) Query: 58 LPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILE 94 + H L G P GKT+ ALT +E Sbjct: 1 MTHALLIGNPNCGKTTLFNALTNANQRVGNWPGVTVE 37 >5A9K-A nrPDB Length = 305 Score = 27.9 bits (60), Expect = 7.5, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%) Query: 46 VTVLKKTLKSANLPHML-FYGPPGTGKTSTILALTKELYGPDL 87 + LK LK + L F GPP TGK+ +L L G L Sbjct: 113 INALKLWLKGIPKKNCLAFIGPPNTGKSMLCNSLIHFLGGSVL 155 >2GXA-A nrPDB Length = 274 Score = 27.9 bits (60), Expect = 7.5, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%) Query: 46 VTVLKKTLKSANLPHML-FYGPPGTGKTSTILALTKELYGPDL 87 + LK LK + L F GPP TGK+ +L L G L Sbjct: 110 INALKLWLKGIPKKNCLAFIGPPNTGKSMLCNSLIHFLGGSVL 152 >5NKM-B nrPDB Length = 317 Score = 27.5 bits (59), Expect = 8.1, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 65/184 (35%), Gaps = 28/184 (15%) Query: 65 GPPGTGKTSTILALT----KELYGPDLMKSRILELN-----ASDERGISIVREKVKNFAR 115 GP G GK++ + L +++Y + + E N + + I IV ++ + Sbjct: 35 GPQGAGKSTLLSMLAGNNSRQMYREYVFRPVSREANEQSRHQTIQIDIYIVNHQIFLDCQ 94 Query: 116 LTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTM-ETYSGVTRFCLICNYVT 174 S L + D++ +M+ LR T Y T + + Sbjct: 95 PMYSFSIMEGLPKVRGGRF-----DDSTAMS----DTLRLTAFLLYVSHTVLVVSETHYD 145 Query: 175 RIIDPLASRCSKFR-----FKALDASNAIDRLRFISEQ-ENVKCDDGVL---ERILDISA 225 ++I + R F+ A + L FI + ++ V+ E +L +S Sbjct: 146 KVIIDTLRVAEQIRPYLAIFRPKLAIDRKTNLVFIKTKASSIDLAPTVIREREELLRLSF 205 Query: 226 GDLR 229 D R Sbjct: 206 QDSR 209 >6HS3-A nrPDB Length = 260 Score = 27.5 bits (59), Expect = 8.2, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 6/65 (9%) Query: 34 KNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRIL 93 +NL + V + +KS + +L GP G GKT++ + G + + + Sbjct: 21 RNLKKRYGSRTVVKDVSLDVKSGEVVGLL--GPNGAGKTTSFYMIV----GLVPLDAGDI 74 Query: 94 ELNAS 98 LN S Sbjct: 75 SLNGS 79 >1G6H-A nrPDB Length = 257 Score = 27.5 bits (59), Expect = 8.2, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 26/51 (50%), Gaps = 2/51 (3%) Query: 29 EKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALT 79 E R +N+ + + A+ + ++ ++ L GP G+GK++ I +T Sbjct: 6 EILRTENIVKYFGEFKALDGVSISVNKGDV--TLIIGPNGSGKSTLINVIT 54 >2GA8-A nrPDB Length = 359 Score = 27.5 bits (59), Expect = 8.3, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 18/38 (47%) Query: 43 DHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTK 80 D + +L ++ ++ G PG+GK++ L + Sbjct: 9 DDVLQLLDNRIEDNYRVCVILVGSPGSGKSTIAEELCQ 46 >5C3C-A nrPDB Length = 281 Score = 27.5 bits (59), Expect = 9.1, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 61/180 (33%), Gaps = 14/180 (7%) Query: 55 SANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGI-----SIVREK 109 A +P M+ GP G GK+ + + +L P + + ++ ASD G R + Sbjct: 45 EARIP-MMLKGPTGCGKSRFVEHMAWKLNRPLITIACNEDMTASDLVGRYLLDKDGTRWQ 103 Query: 110 VKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQS-ALRRTMETYSGVTRF-- 166 + E I+++ +T + L + E F Sbjct: 104 DGPLTVAARIGAICYLDEIVEARQDTIVVI---HPLTDHRRVLPLEKKGELVEAHPDFQI 160 Query: 167 CLICNYVTRIIDPLASRCSKFRFKALD-ASNAIDRLRFISEQENVKCDDGVLERILDISA 225 + N + + + +K RF ALD D I E D E+++ I+ Sbjct: 161 VISYNPGYQSLMKDLKQSTKQRFGALDFDYPKPDIEAEIVSHEA-GVDKDTAEKLVQIAQ 219 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.310 0.121 0.283 Lambda K H 0.267 0.0371 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 10,340,399 Number of Sequences: 36641 Number of extensions: 369790 Number of successful extensions: 2144 Number of sequences better than 10.0: 232 Number of HSP's better than 10.0 without gapping: 211 Number of HSP's successfully gapped in prelim test: 119 Number of HSP's that attempted gapping in prelim test: 1781 Number of HSP's gapped (non-prelim): 382 length of query: 353 length of database: 10,336,785 effective HSP length: 98 effective length of query: 255 effective length of database: 6,745,967 effective search space: 1720221585 effective search space used: 1720221585 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 59 (27.5 bits)