BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P40339 (323 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1SXJ-B nrPDB 664 0.0 1IQP-A nrPDB 273 5e-74 2CHV-A nrPDB 260 5e-70 2CHG-A nrPDB 231 2e-61 1SXJ-C nrPDB 202 1e-52 1SXJ-D nrPDB 186 2e-47 3U5Z-B nrPDB 94 1e-19 1SXJ-E nrPDB 92 2e-19 1SXJ-A nrPDB 80 1e-15 3GLF-B nrPDB 60 1e-09 1NJG-A nrPDB 60 1e-09 3PVS-A nrPDB 52 4e-07 1HQC-A nrPDB 42 5e-04 1IN6-A nrPDB 37 0.017 3MD0-A nrPDB 36 0.027 2R44-A nrPDB 35 0.030 3TK1-A nrPDB 35 0.043 3NXS-A nrPDB 34 0.081 2I3B-A nrPDB 33 0.16 5OFO-C nrPDB 32 0.32 4CIU-A nrPDB 32 0.32 5D4W-A nrPDB 32 0.32 1QVR-A nrPDB 32 0.32 4HSE-A nrPDB 32 0.35 4CVN-A nrPDB 32 0.40 6BLB-A nrPDB 32 0.46 1JBK-A nrPDB 31 0.55 6QEL-G nrPDB 31 0.63 2D4E-A nrPDB 31 0.91 4PPM-A nrPDB 31 0.93 1UHG-A nrPDB 30 1.4 4JDL-A nrPDB 30 1.4 5UJ7-A nrPDB 30 1.6 5V8F-A nrPDB 30 1.6 5UJM-A nrPDB 30 1.6 3IBH-A nrPDB 30 1.6 5L3S-B nrPDB 29 2.2 3IIK-A nrPDB 29 2.2 6ED3-A nrPDB 29 2.5 4JYC-A nrPDB 29 2.9 3M6A-A nrPDB 29 3.1 5JZV-A nrPDB 29 3.5 1V43-A nrPDB 28 3.8 5ZKS-A nrPDB 28 4.0 5O5O-A nrPDB 28 4.2 3PFI-A nrPDB 28 4.2 5WI9-A nrPDB 28 4.4 2HLC-A nrPDB 28 4.6 5VAQ-A nrPDB 28 5.0 3V9R-A nrPDB 28 6.2 3PXG-A nrPDB 28 6.9 3PXI-A nrPDB 28 7.7 2IUT-A nrPDB 28 7.9 2IUU-A nrPDB 27 8.0 3J3U-A nrPDB 27 8.8 6I3U-A nrPDB 27 9.1 6E11-1 nrPDB 27 9.7 >1SXJ-B nrPDB Length = 323 Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust. Identities = 322/323 (99%), Positives = 323/323 (100%) Query: 1 MSKTLSLQLPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVH 60 MSKTLSLQLPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVH Sbjct: 1 MSKTLSLQLPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVH 60 Query: 61 CLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMT 120 CLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMT Sbjct: 61 CLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMT 120 Query: 121 AGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSRCAILRYSKLSDEDVLKRLLQIIK 180 AGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQS+CAILRYSKLSDEDVLKRLLQIIK Sbjct: 121 AGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSQCAILRYSKLSDEDVLKRLLQIIK 180 Query: 181 LEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAGHGLVNADNVFKIVDSPHPLIVKKML 240 LEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAGHGLVNADNVFKIVDSPHPLIVKKML Sbjct: 181 LEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAGHGLVNADNVFKIVDSPHPLIVKKML 240 Query: 241 LASNLEDSIQILRTDLWKKGYSSIDIVTTSFRVTKNLAQVKESVRLEMIKEIGLTHMRIL 300 LASNLEDSIQILRTDLWKKGYSSIDIVTTSFRVTKNLAQVKESVRLEMIKEIGLTHMRIL Sbjct: 241 LASNLEDSIQILRTDLWKKGYSSIDIVTTSFRVTKNLAQVKESVRLEMIKEIGLTHMRIL 300 Query: 301 EGVGTYLQLASMLAKIHKLNNKA 323 EGVGTYLQLASMLAKIHKLNNKA Sbjct: 301 EGVGTYLQLASMLAKIHKLNNKA 323 >1IQP-A nrPDB Length = 327 Score = 273 bits (699), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 141/321 (43%), Positives = 208/321 (64%), Gaps = 9/321 (2%) Query: 7 LQLPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHEL 66 L+ PWVEKYRPQ L DIVG + + RL+ K G+MPH++ +G PG+GKTT+ LA EL Sbjct: 11 LEKPWVEKYRPQRLDDIVGQEHIVKRLKHYVKTGSMPHLLFAGPPGVGKTTAALALAREL 70 Query: 67 LGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPG--KHKIVILDEADSMTAGAQ 124 G ++ LELNASD+RGI+V+R ++K FA+ K P G KI+ LDEAD++T AQ Sbjct: 71 FGENWRHNFLELNASDERGINVIREKVKEFARTK---PIGGASFKIIFLDEADALTQDAQ 127 Query: 125 QALRRTMELYSNSTRFAFACNQSNKIIEPLQSRCAILRYSKLSDEDVLKRLLQIIKLEDV 184 QALRRTME++S++ RF +CN S+KIIEP+QSRCAI R+ L DED+ KRL I + E + Sbjct: 128 QALRRTMEMFSSNVRFILSCNYSSKIIEPIQSRCAIFRFRPLRDEDIAKRLRYIAENEGL 187 Query: 185 KYTNDGLEAIIFTAEGDMRQAINNLQSTVAGHGLVNADNVFKIVDSPHPLIVKKMLLAS- 243 + T +GL+AI++ AEGDMR+AIN LQ+ A + +NVF + P +++M+L + Sbjct: 188 ELTEEGLQAILYIAEGDMRRAINILQAAAALDKKITDENVFMVASRARPEDIREMMLLAL 247 Query: 244 --NLEDSIQILRTDLWKKGYSSIDIVTTSFRVTKNLAQVKESVRLEMIKEIGLTHMRILE 301 N + + LR L K+G S D++ + NL ++E ++ + +IG + R++E Sbjct: 248 KGNFLKAREKLREILLKQGLSGEDVLVQMHKEVFNLP-IEEPKKVLLADKIGEYNFRLVE 306 Query: 302 GVGTYLQLASMLAKIHKLNNK 322 G +QL ++LA+ + K Sbjct: 307 GANEIIQLEALLAQFTLIGKK 327 >2CHV-A nrPDB Length = 319 Score = 260 bits (665), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 133/315 (42%), Positives = 201/315 (63%), Gaps = 5/315 (1%) Query: 11 WVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRS 70 WVEKYRP+ L ++VG E I RL+ + N+PH++ SG PG GKT + LA +L G + Sbjct: 7 WVEKYRPRTLDEVVGQDEVIQRLKGYVERKNIPHLLFSGPPGTGKTATAIALARDLFGEN 66 Query: 71 YADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRT 130 + D +E+NASD+RGIDVVR++IK FA + + KI+ LDEAD++TA AQ ALRRT Sbjct: 67 WRDNFIEMNASDERGIDVVRHKIKEFA-RTAPIGGAPFKIIFLDEADALTADAQAALRRT 125 Query: 131 MELYSNSTRFAFACNQSNKIIEPLQSRCAILRYSKLSDEDVLKRLLQIIKLEDVKYTNDG 190 ME+YS S RF +CN ++IIEP+QSRCA+ R+ + E + KRLL+I + E VK T DG Sbjct: 126 MEMYSKSCRFILSCNYVSRIIEPIQSRCAVFRFKPVPKEAMKKRLLEICEKEGVKITEDG 185 Query: 191 LEAIIFTAEGDMRQAINNLQSTVAGHGLVNADNVFKIVDSPHPLIVKKML---LASNLED 247 LEA+I+ + GD R+AIN LQ A +V+AD +++I + P + +++ L N + Sbjct: 186 LEALIYISGGDFRKAINALQGAAAIGEVVDADTIYQITATARPEEMTELIQTALKGNFME 245 Query: 248 SIQILRTDLWKKGYSSIDIVTTSFRVTKNLAQVKESVRLEMIKEIGLTHMRILEGVGTYL 307 + ++L + + G S DIV FR ++ +K+S+++++I ++G R+ EG + Sbjct: 246 ARELLDRLMVEYGMSGEDIVAQLFREIISMP-IKDSLKVQLIDKLGEVDFRLTEGANERI 304 Query: 308 QLASMLAKIHKLNNK 322 QL + LA + L K Sbjct: 305 QLDAYLAYLSTLAKK 319 >2CHG-A nrPDB Length = 226 Score = 231 bits (590), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 109/217 (50%), Positives = 151/217 (69%), Gaps = 1/217 (0%) Query: 11 WVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRS 70 WVEKYRP+ L ++VG E I RL+ + N+PH++ SG PG GKT + LA +L G + Sbjct: 7 WVEKYRPRTLDEVVGQDEVIQRLKGYVERKNIPHLLFSGPPGTGKTATAIALARDLFGEN 66 Query: 71 YADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRT 130 + D +E+NASD+RGIDVVR++IK FA + + KI+ LDEAD++TA AQ ALRRT Sbjct: 67 WRDNFIEMNASDERGIDVVRHKIKEFA-RTAPIGGAPFKIIFLDEADALTADAQAALRRT 125 Query: 131 MELYSNSTRFAFACNQSNKIIEPLQSRCAILRYSKLSDEDVLKRLLQIIKLEDVKYTNDG 190 ME+YS S RF +CN ++IIEP+QSRCA+ R+ + E + KRLL+I + E VK T DG Sbjct: 126 MEMYSKSCRFILSCNYVSRIIEPIQSRCAVFRFKPVPKEAMKKRLLEICEKEGVKITEDG 185 Query: 191 LEAIIFTAEGDMRQAINNLQSTVAGHGLVNADNVFKI 227 LEA+I+ + GD R+AIN LQ A +V+AD +++I Sbjct: 186 LEALIYISGGDFRKAINALQGAAAIGEVVDADTIYQI 222 >1SXJ-C nrPDB Length = 340 Score = 202 bits (515), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 113/317 (35%), Positives = 182/317 (57%), Gaps = 11/317 (3%) Query: 9 LPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLG 68 LPWVEKYRP+ L ++ G E I +++ +G +PH++ G PG GKT+++ LA E+ G Sbjct: 13 LPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYG 72 Query: 69 RSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALR 128 ++Y++ VLELNASDDRGIDVVRNQIK FA + G K++ILDEAD+MT AQ ALR Sbjct: 73 KNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKG-FKLIILDEADAMTNAAQNALR 131 Query: 129 RTMELYSNSTRFAFACNQSNKIIEPLQSRCAILRYSKLSDEDVLKRLLQIIKLEDVKYTN 188 R +E Y+ +TRF N ++K+ L S+C R+ L E + +R+ ++ E +K + Sbjct: 132 RVIERYTKNTRFCVLANYAHKLTPALLSQCTRFRFQPLPQEAIERRIANVLVHEKLKLSP 191 Query: 189 DGLEAIIFTAEGDMRQAINNLQSTVA-----GHGLVNADNVFKIVDSPHPLIVKKMLLAS 243 + +A+I + GDMR+ +N LQS A ++ D +++ +P P + K +L S Sbjct: 192 NAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYECCGAPRPSDL-KAVLKS 250 Query: 244 NLEDSIQILRTDLWK----KGYSSIDIVTTSFRVTKNLAQVKESVRLEMIKEIGLTHMRI 299 LED L K KG + ID++ ++ ++ E R+ ++ ++ I Sbjct: 251 ILEDDWGTAHYTLNKVRSAKGLALIDLIEGIVKILEDYELQNEETRVHLLTKLADIEYSI 310 Query: 300 LEGVGTYLQLASMLAKI 316 +G +Q ++++ I Sbjct: 311 SKGGNDQIQGSAVIGAI 327 >1SXJ-D nrPDB Length = 353 Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 117/332 (35%), Positives = 180/332 (54%), Gaps = 22/332 (6%) Query: 8 QLPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELL 67 Q PWVEKYRP+ L ++ + L++ K N+PHM+ G PG GKT+++ L EL Sbjct: 24 QQPWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELY 83 Query: 68 GRSYADG-VLELNASDDRGIDVVRNQIKHFAQKKL---------HLPPGKHKIVILDEAD 117 G +LELNASD+RGI +VR ++K+FA+ + + P +KI+ILDEAD Sbjct: 84 GPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEAD 143 Query: 118 SMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSRCAILRYSKLSDEDVLKRLLQ 177 SMTA AQ ALRRTME YS TRF CN +II+PL S+C+ R+ L + + RL Sbjct: 144 SMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASQCSKFRFKALDASNAIDRLRF 203 Query: 178 IIKLEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAG-HGLVNADNVFKI-VDS----- 230 I + E+VK + LE I+ + GD+R+ I LQS G L + N+ V+ Sbjct: 204 ISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNITSTQVEELAGVV 263 Query: 231 PHPLIVKKM-LLASNLEDSIQILRTDLWKKGYSSIDIVTT--SFRVTKNLAQVKESVRLE 287 PH ++++ + + S D I+ K G+S+ +V + +T + + + + Sbjct: 264 PHDILIEIVEKVKSGDFDEIKKYVNTFMKSGWSAASVVNQLHEYYITND--NFDTNFKNQ 321 Query: 288 MIKEIGLTHMRILEGVGTYLQLASMLAKIHKL 319 + + T R+ G ++QL ++L KI +L Sbjct: 322 ISWLLFTTDSRLNNGTNEHIQLLNLLVKISQL 353 >3U5Z-B nrPDB Length = 324 Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 68/219 (31%), Positives = 115/219 (52%), Gaps = 19/219 (8%) Query: 13 EKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMII-SGMPGIGKTTSVHCLAHELLGRSY 71 +KYRP + + + + + I G +PH+I+ S PG GKTT L H++ Sbjct: 18 QKYRPSTIDECILPAFDKETFKSITSKGKIPHIILHSPSPGTGKTTVAKALCHDV----N 73 Query: 72 ADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEAD-SMTAGAQQALRRT 130 AD ++ +N SD + ID VR + +FA G+ K++++DE D S A +Q+ LR Sbjct: 74 AD-MMFVNGSDCK-IDFVRGPLTNFASAASF--DGRQKVIVIDEFDRSGLAESQRHLRSF 129 Query: 131 MELYSNSTRFAFACNQSNKIIEPLQSRCAILRYSKLSDED-------VLKRLLQIIKLED 183 ME YS++ N + II+PLQSRC ++ + + +DED +++RL +I K E Sbjct: 130 MEAYSSNCSIIITANNIDGIIKPLQSRCRVITFGQPTDEDKIEMMKQMIRRLTEICKHEG 189 Query: 184 VKYTN-DGLEAIIFTAEGDMRQAINNLQSTVAGHGLVNA 221 + + + A++ D R+ I L S + G+++A Sbjct: 190 IAIADMKVVAALVKKNFPDFRKTIGELDS-YSSKGVLDA 227 >1SXJ-E nrPDB Length = 354 Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 69/243 (28%), Positives = 120/243 (49%), Gaps = 35/243 (14%) Query: 11 WVEKYRPQVLSDIVGNKETIDRLQQIA-KDGNMPHMIISGMPGIGKTTSVHCLAHELLG- 68 WV+KYRP+ L+ + N+E + L+ ++ + ++PH+++ G G GK T L + G Sbjct: 4 WVDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGP 63 Query: 69 ---------RSYADGV--------------LELNASDDRGID--VVRNQIKHFAQ-KKLH 102 R + LE+ SD D V++ +K AQ +++ Sbjct: 64 GVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVD 123 Query: 103 LPPGK------HKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQS 156 K +K VI++EA+S+T AQ ALRRTME YS + R C+ + II P++S Sbjct: 124 FQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKS 183 Query: 157 RCAILRYSKLSDEDVLKRLLQIIKLEDVKY-TNDGLEAIIFTAEGDMRQAINNLQSTVAG 215 +C ++R SD ++ L ++ E ++ T D L+ I + G++R ++ L+S Sbjct: 184 QCLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESMALN 243 Query: 216 HGL 218 + L Sbjct: 244 NEL 246 >1SXJ-A nrPDB Length = 516 Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 66/247 (26%), Positives = 109/247 (44%), Gaps = 35/247 (14%) Query: 11 WVEKYRPQVLSDIVGNKETIDRLQ---------------QIAKDGN--MPHMIISGMPGI 53 W KY P L + GNK ++ +L+ KDG+ ++ G PGI Sbjct: 29 WTVKYAPTNLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGI 88 Query: 54 GKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIK----------HFAQ-KKLH 102 GKTT+ H +A EL +LE NASD R ++ +K +F ++ Sbjct: 89 GKTTAAHLVAQEL-----GYDILEQNASDVRSKTLLNAGVKNALDNMSVVGYFKHNEEAQ 143 Query: 103 LPPGKHKIVILDEADSMTAGAQQALRRTMELY-SNSTRFAFACNQSN-KIIEPLQSRCAI 160 GKH ++I+DE D M+ G + + + + ST CN+ N + P C Sbjct: 144 NLNGKHFVIIMDEVDGMSGGDRGGVGQLAQFCRKTSTPLILICNERNLPKMRPFDRVCLD 203 Query: 161 LRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAGHGLVN 220 +++ + + RL+ I E K + ++ +I T GD+RQ IN L + +N Sbjct: 204 IQFRRPDANSIKSRLMTIAIREKFKLDPNVIDRLIQTTRGDIRQVINLLSTISTTTKTIN 263 Query: 221 ADNVFKI 227 +N+ +I Sbjct: 264 HENINEI 270 >3GLF-B nrPDB Length = 395 Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 54/235 (22%), Positives = 102/235 (43%), Gaps = 30/235 (12%) Query: 14 KYRPQVLSDIVGNKETIDRLQQIAKDGNMPH-MIISGMPGIGKTTSVHCLA--------- 63 K+RPQ +D+VG + + L G + H + SG G+GKT+ LA Sbjct: 31 KWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGI 90 Query: 64 -----------HELLGRSYADGVLELNASDDRGIDVVRNQIKH--FAQKKLHLPPGKHKI 110 E+ + D ++E++A+ ++ R+ + + +A + G+ K+ Sbjct: 91 TATPCGVCDNCREIEQGRFVD-LIEIDAASRTKVEDTRDLLDNVQYAPAR-----GRFKV 144 Query: 111 VILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSRCAILRYSKLSDED 170 ++DE ++ + AL +T+E +F A K+ + SRC L E Sbjct: 145 YLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQ 204 Query: 171 VLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQAIN-NLQSTVAGHGLVNADNV 224 + +L I+ E + + L+ + AEG +R A++ Q+ +G G V+ V Sbjct: 205 IRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAV 259 >1NJG-A nrPDB Length = 250 Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 59/249 (23%), Positives = 109/249 (43%), Gaps = 33/249 (13%) Query: 1 MSKTLSLQLPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPH-MIISGMPGIGKTTSV 59 M ++S Q+ K+RPQ +D+VG + + L G + H + SG G+GKT+ Sbjct: 4 MGGSMSYQV-LARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIA 62 Query: 60 HCLAHEL---------------------LGRSYADGVLELNASDDRGIDVVRNQIKH--F 96 LA L GR + D ++E++A+ ++ R+ + + + Sbjct: 63 RLLAKGLNCETGITATPCGVCDNCREIEQGR-FVD-LIEIDAASRTKVEDTRDLLDNVQY 120 Query: 97 AQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQS 156 A + G+ K+ ++DE ++ + AL +T+E +F A K+ + S Sbjct: 121 APAR-----GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILS 175 Query: 157 RCAILRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQAIN-NLQSTVAG 215 RC L E + +L I+ E + + L+ + AEG +R A++ Q+ +G Sbjct: 176 RCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASG 235 Query: 216 HGLVNADNV 224 G V+ V Sbjct: 236 DGQVSTQAV 244 >3PVS-A nrPDB Length = 447 Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 19/211 (9%) Query: 10 PWVEKYRPQVLSDIVGNKETI---DRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHEL 66 P + RP+ L+ +G + + L + + G++ MI+ G PG GKTT +A Sbjct: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIAR-- 72 Query: 67 LGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQQA 126 YA+ +E ++ G+ +R I+ Q + G+ I+ +DE Q A Sbjct: 73 ----YANADVERISAVTSGVKEIREAIERARQNRNA---GRRTILFVDEVHRFNKSQQDA 125 Query: 127 LRRTMELYSNSTRFAFACNQSNKIIEPLQSRCAILRYSKLSDEDVLKRLLQIIK------ 180 +E + + A N S ++ L SR + LS ED+ + L Q ++ Sbjct: 126 FLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGY 185 Query: 181 -LEDVKYTNDGLEAIIFTAEGDMRQAINNLQ 210 +D+ ++ AI GD R+A+N L+ Sbjct: 186 GGQDIVLPDETRRAIAELVNGDARRALNTLE 216 >1HQC-A nrPDB Length = 324 Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 25/208 (12%) Query: 16 RPQVLSDIVGNKETIDRLQ---QIAKDGNMP--HMIISGMPGIGKTTSVHCLAHELLG-- 68 RP+ L + +G + +L+ + AK P H+++ G PG+GKTT H +AHE LG Sbjct: 7 RPKTLDEYIGQERLKQKLRVYLEAAKARKEPLEHLLLFGPPGLGKTTLAHVIAHE-LGVN 65 Query: 69 -RSYADGVLE--------LNASDDRGIDVVRNQIKHFA-QKKLHLPPGKHKIVILDEADS 118 R + +E L S + G + ++I + Q + HL P V+ D Sbjct: 66 LRVTSGPAIEKPGDLAAILANSLEEGDILFIDEIHRLSRQAEEHLYPAMEDFVM----DI 121 Query: 119 MTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSRCAILRY-SKLSDEDVLKRLLQ 177 + A RT+ L A + I PL SR I+ + + E++ + +++ Sbjct: 122 VIGQGPAA--RTIRLELPRFTLIGATTRPGLITAPLLSRFGIVEHLEYYTPEELAQGVMR 179 Query: 178 IIKLEDVKYTNDGLEAIIFTAEGDMRQA 205 +L V+ T + I + G MR A Sbjct: 180 DARLLGVRITEEAALEIGRRSRGTMRVA 207 >1IN6-A nrPDB Length = 334 Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust. Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 5/60 (8%) Query: 12 VEKYRPQVLSDIVGNKETIDRLQQIAKDGNM-----PHMIISGMPGIGKTTSVHCLAHEL 66 V+ RP+ L + +G + +L + M H++++G PG+G+TT H +A EL Sbjct: 16 VQFLRPKSLDEFIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGRTTLAHIIASEL 75 >3MD0-A nrPDB Length = 355 Score = 35.8 bits (81), Expect = 0.027, Method: Compositional matrix adjust. Identities = 16/45 (35%), Positives = 27/45 (60%) Query: 40 GNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDR 84 GN + I+G+PG+GK+T++ L L+ R + VL ++ S R Sbjct: 77 GNAHRVGITGVPGVGKSTAIEALGMHLIERGHRVAVLAVDPSSTR 121 >2R44-A nrPDB Length = 331 Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 8/112 (7%) Query: 23 IVGNKETIDRLQ-QIAKDGNMPHMIISGMPGIGKTTSVHCLAHEL-LGRSYADGVLELNA 80 +VG K I+RL I G H+++ G+PG+ KT SV+ LA + L +L Sbjct: 29 VVGQKYMINRLLIGICTGG---HILLEGVPGLAKTLSVNTLAKTMDLDFHRIQFTPDLLP 85 Query: 81 SDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTME 132 SD G + +F KK P ++ DE + A Q AL M+ Sbjct: 86 SDLIGTMIYNQHKGNFEVKK---GPVFSNFILADEVNRSPAKVQSALLECMQ 134 >3TK1-A nrPDB Length = 330 Score = 35.0 bits (79), Expect = 0.043, Method: Compositional matrix adjust. Identities = 17/52 (32%), Positives = 30/52 (57%) Query: 33 LQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDR 84 L+ + G H+ I+G+PG+GK+TS+ L L+ + + VL ++ S R Sbjct: 47 LELMPDAGRAMHVGITGVPGVGKSTSIEALGMHLIEQGHRVAVLAVDPSSVR 98 >3NXS-A nrPDB Length = 329 Score = 34.3 bits (77), Expect = 0.081, Method: Compositional matrix adjust. Identities = 15/45 (33%), Positives = 27/45 (60%) Query: 40 GNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDR 84 G+ H+ I+G+PG+GK+T++ L L+ + VL ++ S R Sbjct: 55 GSAMHVGITGVPGVGKSTTIEALGMHLIEAGHRVAVLAVDPSSTR 99 >2I3B-A nrPDB Length = 189 Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust. Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 8/91 (8%) Query: 44 HMIISGMPGIGKTTSVHCLAHELLGRS--YADGVL--ELNASDDR-GIDVV--RNQIKHF 96 H+ ++G PG+GKTT +H A E+L S DG E+ R G DVV Sbjct: 3 HVFLTGPPGVGKTTLIH-KASEVLKSSGVPVDGFYTEEVRQGGRRIGFDVVTLSGTRGPL 61 Query: 97 AQKKLHLPPGKHKIVILDEADSMTAGAQQAL 127 ++ L PPGK + + +T+ Q AL Sbjct: 62 SRVGLEPPPGKRECRVGQYVVDLTSFEQLAL 92 >5OFO-C nrPDB Length = 871 Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust. Identities = 16/56 (28%), Positives = 28/56 (50%) Query: 20 LSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGV 75 L ++G E I R Q+ + + ++ G PG+GKT V LA ++ +G+ Sbjct: 181 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGL 236 >4CIU-A nrPDB Length = 727 Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust. Identities = 16/56 (28%), Positives = 28/56 (50%) Query: 20 LSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGV 75 L ++G E I R Q+ + + ++ G PG+GKT V LA ++ +G+ Sbjct: 35 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGL 90 >5D4W-A nrPDB Length = 926 Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust. Identities = 16/53 (30%), Positives = 28/53 (52%) Query: 23 IVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGV 75 ++G +E I R+ +I + ++ G PG+GKTT V LA ++ D + Sbjct: 197 VIGREEEIRRVIRILSRRTKNNPVLIGEPGVGKTTIVEGLAQRIVNADVPDNL 249 >1QVR-A nrPDB Length = 854 Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 4/58 (6%) Query: 20 LSDIVGNKETIDRLQQI--AKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGV 75 L ++G E I R+ QI + N P +I G PG+GKT V LA ++ +G+ Sbjct: 169 LDPVIGRDEEIRRVIQILLRRTKNNPVLI--GEPGVGKTAIVEGLAQRIVKGDVPEGL 224 >4HSE-A nrPDB Length = 397 Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 4/58 (6%) Query: 20 LSDIVGNKETIDRLQQI--AKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGV 75 L ++G E I R+ QI + N P +I G PG+GKT V LA ++ +G+ Sbjct: 32 LDPVIGRDEEIRRVIQILLRRTKNNPVLI--GEPGVGKTAIVEGLAQRIVKGDVPEGL 87 >4CVN-A nrPDB Length = 191 Score = 32.0 bits (71), Expect = 0.40, Method: Compositional matrix adjust. Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 11/73 (15%) Query: 47 ISGMPGIGKTTSVHCLAHELLGRSYA---DGVLELNASD--DRGIDVVRNQIKHFAQKKL 101 I+G PG+GKTT LA E LG Y D LE D ++V +++ +F +K+L Sbjct: 16 ITGTPGVGKTTIAKLLA-EKLGYEYVNLRDFALEKGCGREVDGEVEVEIDELAYFVEKEL 74 Query: 102 HLPPGKHKIVILD 114 K + V+LD Sbjct: 75 -----KDRNVVLD 82 >6BLB-A nrPDB Length = 355 Score = 31.6 bits (70), Expect = 0.46, Method: Compositional matrix adjust. Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 5/56 (8%) Query: 16 RPQVLSDIVGNKETIDRLQQI-----AKDGNMPHMIISGMPGIGKTTSVHCLAHEL 66 RP L+D +G ++++ + + H +I G PG+GKTT + +A E+ Sbjct: 28 RPLKLADYIGQPSVREQMELFIHAARGRQEALDHTLIFGPPGLGKTTLANIIAQEM 83 >1JBK-A nrPDB Length = 195 Score = 31.2 bits (69), Expect = 0.55, Method: Compositional matrix adjust. Identities = 16/56 (28%), Positives = 28/56 (50%) Query: 20 LSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGV 75 L ++G E I R Q+ + + ++ G PG+GKT V LA ++ +G+ Sbjct: 21 LDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGL 76 >6QEL-G nrPDB Length = 245 Score = 31.2 bits (69), Expect = 0.63, Method: Compositional matrix adjust. Identities = 14/31 (45%), Positives = 17/31 (54%) Query: 39 DGNMPHMIISGMPGIGKTTSVHCLAHELLGR 69 DGN+ I SG PG GK + +ELL R Sbjct: 96 DGNIASFIFSGKPGTGKNHLAAAICNELLLR 126 >2D4E-A nrPDB Length = 515 Score = 30.8 bits (68), Expect = 0.91, Method: Compositional matrix adjust. Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 7/89 (7%) Query: 29 TIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDV 88 T +L +I K+ ++P + + + G G+ +AH L+ +L L + G V Sbjct: 204 TATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLV------PLLTLTGETETGKIV 257 Query: 89 VRNQIKHFAQKKLHLPPGKHKIVILDEAD 117 +RN H + L GK ++ +AD Sbjct: 258 MRNAADHLKRLSPEL-GGKSPALVFADAD 285 >4PPM-A nrPDB Length = 861 Score = 30.8 bits (68), Expect = 0.93, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 5/64 (7%) Query: 231 PHPLIVKKMLLASNLEDSIQILRTDLWKKGYSSID--IVTTSFRVTKNLAQVKESVRLEM 288 P L++ K L + + R DLW+K Y + D +V +S NLA V V L Sbjct: 638 PDVLMLSKSLSGGLIPIGATLCRADLWQKAYGTADRFLVHSSTYGGGNLASV---VALSA 694 Query: 289 IKEI 292 ++EI Sbjct: 695 LREI 698 >1UHG-A nrPDB Length = 385 Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust. Identities = 36/140 (25%), Positives = 59/140 (42%), Gaps = 30/140 (21%) Query: 171 VLKRLLQIIKLEDVKYTNDGLEAIIF-TAEGDMRQAINNLQSTVAGHGLVNADNVFKIVD 229 +L LQ +K + GLE I F TA R+ IN+ + + + + V Sbjct: 113 ILPEYLQCVK----ELYRGGLEPINFQTAADQARELINSWVES-------QTNGIIRNVL 161 Query: 230 SPHPLIVKKMLLASNLEDSIQILRTDLWKKGYSSIDIVTTSFRVTKNLAQVKESVRLEMI 289 P + + ++ N I+ LW+K + D FRVT+ +ES ++M+ Sbjct: 162 QPSSVDSQTAMVLVN-----AIVFKGLWEKAFKDEDTQAMPFRVTE-----QESKPVQMM 211 Query: 290 KEIGLTH--------MRILE 301 +IGL M+ILE Sbjct: 212 YQIGLFRVASMASEKMKILE 231 >4JDL-A nrPDB Length = 223 Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust. Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 18/97 (18%) Query: 45 MIISGMPGIGKTTSV-------HCLAHELLGRSY----ADGVLELNASDDRGIDVVRNQI 93 M++SG+P + T + H ++ ++G + V L+ASDD G VV + I Sbjct: 130 MVVSGLPAVSSTERLEILDEERHVISFSVVGGDHRLKNYRSVTTLHASDDEGTVVVESYI 189 Query: 94 KHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRT 130 + +PPG + L D++ Q+L R+ Sbjct: 190 -------VDVPPGNTEEETLSFVDTIVRCNLQSLARS 219 >5UJ7-A nrPDB Length = 391 Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust. Identities = 11/16 (68%), Positives = 13/16 (81%) Query: 45 MIISGMPGIGKTTSVH 60 M ISG+PG GKT +VH Sbjct: 60 MYISGVPGTGKTATVH 75 >5V8F-A nrPDB Length = 913 Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust. Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 22/102 (21%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVR---------NQIK- 94 + ++G PG+GKT +V + ELL S + + + G+ +V+ N++ Sbjct: 475 IYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNKVSG 534 Query: 95 ------------HFAQKKLHLPPGKHKIVILDEADSMTAGAQ 124 F K++ K +V+LDE D+M +Q Sbjct: 535 ERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKSQ 576 >5UJM-A nrPDB Length = 522 Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust. Identities = 11/16 (68%), Positives = 13/16 (81%) Query: 45 MIISGMPGIGKTTSVH 60 M ISG+PG GKT +VH Sbjct: 191 MYISGVPGTGKTATVH 206 >3IBH-A nrPDB Length = 233 Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust. Identities = 23/102 (22%), Positives = 47/102 (46%), Gaps = 4/102 (3%) Query: 224 VFKIVDSPHPLIVKKMLLASNLEDSIQILRTDLWKKGYSSIDIVTTSFRVTKNLAQVKES 283 ++ P+P V+ L N+ S+Q +R +LWK + + + ++ T + ++ + Sbjct: 21 IYDTPAGPYPARVRIALAEKNMLSSVQFVRINLWKGEHKKPEFLAKNYSGTVPVLELDDG 80 Query: 284 VRLEMIKEIGLTHMRILEGVGTYLQLASMLAK--IHKLNNKA 323 + I ++ L+G T L + L K IH +N +A Sbjct: 81 TLIAECTAI-TEYIDALDGTPT-LTGKTPLEKGVIHMMNKRA 120 >5L3S-B nrPDB Length = 296 Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust. Identities = 14/48 (29%), Positives = 29/48 (60%), Gaps = 1/48 (2%) Query: 20 LSDIVGNKETIDRLQQIAKDGNMPHMIIS-GMPGIGKTTSVHCLAHEL 66 +++I+ + D +++I G P +II G+ G+GKTT++ + + L Sbjct: 78 ITEILTKNQKTDLIEKIRSSGKKPFVIIFFGVNGVGKTTTIAKVVNML 125 >3IIK-A nrPDB Length = 180 Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 7/41 (17%) Query: 42 MPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASD 82 +P+++++G PG+GKTT L EL +S G+ +N D Sbjct: 11 LPNILLTGTPGVGKTT----LGKELASKS---GLKYINVGD 44 >6ED3-A nrPDB Length = 848 Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust. Identities = 15/54 (27%), Positives = 26/54 (48%) Query: 14 KYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELL 67 + R L ++G I R+ Q+ + ++ G PG+GKT V LA ++ Sbjct: 171 RAREGKLDPVIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIV 224 >4JYC-A nrPDB Length = 337 Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust. Identities = 13/38 (34%), Positives = 22/38 (57%) Query: 47 ISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDR 84 I+G+PG+GK+T++ L L + VL ++ S R Sbjct: 60 ITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPSSTR 97 >3M6A-A nrPDB Length = 543 Score = 28.9 bits (63), Expect = 3.1, Method: Compositional matrix adjust. Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 16/98 (16%) Query: 33 LQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYA----DGVLELNASDDRG--- 85 +Q++ K P + ++G PG+GKT+ +A LGR + GV + S+ RG Sbjct: 99 VQKLTKSLKGPILCLAGPPGVGKTSLAKSIAKS-LGRKFVRISLGGV--RDESEIRGHRR 155 Query: 86 --IDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTA 121 + + +I +K L P + +LDE D M++ Sbjct: 156 TYVGAMPGRIIQGMKKAGKLNP----VFLLDEIDKMSS 189 >5JZV-A nrPDB Length = 206 Score = 28.9 bits (63), Expect = 3.5, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 10/51 (19%) Query: 34 QQIAKDGNM--PHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASD 82 QQ+ + G+M P+++++G PG+GKTT L EL +S G+ +N D Sbjct: 28 QQMGR-GSMLLPNILLTGTPGVGKTT----LGKELASKS---GLKYINVGD 70 >1V43-A nrPDB Length = 372 Score = 28.5 bits (62), Expect = 3.8, Method: Compositional matrix adjust. Identities = 47/197 (23%), Positives = 80/197 (40%), Gaps = 29/197 (14%) Query: 20 LSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLA---HELLGRSY-ADGV 75 L+ GN +++L KDG +++ G G GKTT++ +A GR Y D Sbjct: 17 LTKRFGNFTAVNKLNLTIKDGEF--LVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGDRD 74 Query: 76 LELNASDDRGIDVVRNQIKHFAQKKLH---LPPGKHKIVILDEADSMTAGAQQALRRTME 132 + DR I +V + ++ P K K DE D A + L+ +E Sbjct: 75 VTYLPPKDRNISMVFQSYAVWPHMTVYENIAFPLKIKKFPKDEIDKRVRWAAELLQ--IE 132 Query: 133 LYSNSTRFAFACNQSNKII---------------EPLQSRCAILRYSKLSDEDVLKRLLQ 177 N + Q ++ EPL + A LR + ++ +K+L Q Sbjct: 133 ELLNRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAE---IKKLQQ 189 Query: 178 IIKLEDVKYTNDGLEAI 194 +K+ + T+D +EA+ Sbjct: 190 KLKVTTIYVTHDQVEAM 206 >5ZKS-A nrPDB Length = 445 Score = 28.5 bits (62), Expect = 4.0, Method: Compositional matrix adjust. Identities = 12/50 (24%), Positives = 28/50 (56%) Query: 180 KLEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAGHGLVNADNVFKIVD 229 ++ V+++N ++ + FTA+G R N + G + +A++ F++ D Sbjct: 134 RISSVEFSNFCIDGLHFTADGSGRHPENTYANGKTGIHVASANDSFRVTD 183 >5O5O-A nrPDB Length = 284 Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 17/132 (12%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASD------DRGIDV-----VRNQI 93 MI+SG G GK+ ++ L E +G D + + D DR I VRN Sbjct: 4 MIVSGRSGSGKSVALRAL--EDMGFYCVDNLPVVLLPDLARTLADREISAAVSIDVRNMP 61 Query: 94 KH---FAQKKLHLPPGKHKIVILDEADSMTAGAQQA-LRRTMELYSNSTRFAFACNQSNK 149 + F Q +LP ++ +AD T + + RR L S + A ++ + Sbjct: 62 ESPEIFEQAMSNLPDAFSPQLLFLDADRNTLIRRYSDTRRLHPLSSKNLSLESAIDKESD 121 Query: 150 IIEPLQSRCAIL 161 ++EPL+SR ++ Sbjct: 122 LLEPLRSRADLI 133 >3PFI-A nrPDB Length = 338 Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust. Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 5/56 (8%) Query: 16 RPQVLSDIVGN---KETIDRLQQIAKDGN--MPHMIISGMPGIGKTTSVHCLAHEL 66 RP +G K+ ++ AK N + H++ SG G+GKTT + +++E+ Sbjct: 24 RPSNFDGYIGQESIKKNLNVFIAAAKKRNECLDHILFSGPAGLGKTTLANIISYEM 79 >5WI9-A nrPDB Length = 470 Score = 28.5 bits (62), Expect = 4.4, Method: Compositional matrix adjust. Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%) Query: 268 TTSFRVTKN-LAQVKESVRLEMIKEIGLTHMRILEGV 303 TT+ + KN L+QV +++RL+ I+ G T +L+G Sbjct: 379 TTAIYMMKNFLSQVLQAIRLDEIRVFGYTAWSLLDGF 415 >2HLC-A nrPDB Length = 230 Score = 28.5 bits (62), Expect = 4.6, Method: Compositional matrix adjust. Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 2/65 (3%) Query: 160 ILRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAGHGLV 219 I+ +S + + L + +IK+ V+YT D ++ I + ++ N+ +TV+G G Sbjct: 74 IISHSMFNPDTYLNDV-ALIKIPHVEYT-DNIQPIRLPSGEELNNKFENIWATVSGWGQS 131 Query: 220 NADNV 224 N D V Sbjct: 132 NTDTV 136 >5VAQ-A nrPDB Length = 954 Score = 28.1 bits (61), Expect = 5.0, Method: Compositional matrix adjust. Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%) Query: 268 TTSFRVTKN-LAQVKESVRLEMIKEIGLTHMRILEGV 303 TT+ + KN L+QV +++RL+ I+ G T +L+G Sbjct: 401 TTAIYMMKNFLSQVLQAIRLDEIRVFGYTAWSLLDGF 437 >3V9R-A nrPDB Length = 90 Score = 27.7 bits (60), Expect = 6.2, Method: Compositional matrix adjust. Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 2/57 (3%) Query: 171 VLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTV--AGHGLVNADNVF 225 V +RL Q++ ED+KYT + +++ A + + ++LQ+ AG G+VN ++ Sbjct: 18 VEERLQQVLSSEDIKYTPRFINSLLELAYLQLGEMGSDLQAFARHAGRGVVNKSDLM 74 >3PXG-A nrPDB Length = 468 Score = 27.7 bits (60), Expect = 6.9, Method: Compositional matrix adjust. Identities = 12/48 (25%), Positives = 25/48 (52%) Query: 20 LSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELL 67 L ++G + I R+ ++ + ++ G PG+GKT LA +++ Sbjct: 179 LDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQII 226 >3PXI-A nrPDB Length = 758 Score = 27.7 bits (60), Expect = 7.7, Method: Compositional matrix adjust. Identities = 12/48 (25%), Positives = 25/48 (52%) Query: 20 LSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELL 67 L ++G + I R+ ++ + ++ G PG+GKT LA +++ Sbjct: 179 LDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQII 226 >2IUT-A nrPDB Length = 574 Score = 27.7 bits (60), Expect = 7.9, Method: Compositional matrix adjust. Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 6/54 (11%) Query: 17 PQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRS 70 P L +G + I L + MPH++++G G GK+ V+ + +L +S Sbjct: 195 PLALGHDIGGRPIITDLAK------MPHLLVAGTTGSGKSVGVNAMLLSILFKS 242 >2IUU-A nrPDB Length = 491 Score = 27.3 bits (59), Expect = 8.0, Method: Compositional matrix adjust. Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 6/54 (11%) Query: 17 PQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRS 70 P L +G + I L + MPH++++G G GK+ V+ + +L +S Sbjct: 195 PLALGHDIGGRPIITDLAK------MPHLLVAGTTGSGKSVGVNAMLLSILFKS 242 >3J3U-A nrPDB Length = 810 Score = 27.3 bits (59), Expect = 8.8, Method: Compositional matrix adjust. Identities = 12/48 (25%), Positives = 25/48 (52%) Query: 20 LSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELL 67 L ++G + I R+ ++ + ++ G PG+GKT LA +++ Sbjct: 179 LDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQII 226 >6I3U-A nrPDB Length = 615 Score = 27.3 bits (59), Expect = 9.1, Method: Compositional matrix adjust. Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%) Query: 147 SNKIIEPLQSRCAILRYSKLSDEDVLKRLLQII---KLEDVKYTNDGLE 192 S+ P R A+ R + DED+L LLQ++ K E+ +GLE Sbjct: 103 SSHYTNPTVRRYAVARLRQADDEDLLMYLLQLVQALKYENFDDIKNGLE 151 >6E11-1 nrPDB Length = 906 Score = 27.3 bits (59), Expect = 9.7, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 24/54 (44%) Query: 13 EKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHEL 66 EK R L I G E I + + N ++ G PG GKTT V L + + Sbjct: 199 EKVRNGKLQGIYGRDEEIRAIIESLLRYNKNSPVLVGNPGTGKTTIVEGLVYRI 252 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1SXJ-B nrPDB 436 e-123 2CHV-A nrPDB 398 e-111 1IQP-A nrPDB 388 e-108 1SXJ-C nrPDB 359 1e-99 1SXJ-D nrPDB 342 1e-94 2CHG-A nrPDB 306 8e-84 1NJG-A nrPDB 218 3e-57 3GLF-B nrPDB 209 1e-54 1SXJ-A nrPDB 203 7e-53 1SXJ-E nrPDB 203 8e-53 3U5Z-B nrPDB 198 3e-51 3PVS-A nrPDB 188 2e-48 1HQC-A nrPDB 147 7e-36 Sequences not found previously or not previously below threshold: 1IN6-A nrPDB 103 8e-23 6BLB-A nrPDB 90 1e-18 3PFI-A nrPDB 88 8e-18 4D81-A nrPDB 64 1e-10 2CE7-A nrPDB 59 2e-09 5Z6Q-A nrPDB 59 4e-09 4LCB-A nrPDB 57 7e-09 6NYV-B nrPDB 56 3e-08 6B5D-A nrPDB 56 3e-08 6AP1-A nrPDB 56 3e-08 5EQT-A nrPDB 55 5e-08 4LGM-A nrPDB 54 6e-08 6EF2-J nrPDB 54 7e-08 6MSK-B nrPDB 54 8e-08 3WHK-A nrPDB 54 8e-08 5VHF-B nrPDB 54 8e-08 3D8B-A nrPDB 54 1e-07 5WC0-A nrPDB 54 1e-07 5VFP-B nrPDB 54 1e-07 5VHO-B nrPDB 53 1e-07 3EIH-A nrPDB 53 1e-07 3JCO-J nrPDB 53 2e-07 5XMK-A nrPDB 52 3e-07 5VHP-E nrPDB 52 4e-07 3H4M-A nrPDB 51 6e-07 5M32-h nrPDB 51 6e-07 2XSZ-D nrPDB 51 7e-07 5VHP-C nrPDB 51 7e-07 5GJQ-J nrPDB 51 8e-07 6CHS-H nrPDB 50 1e-06 6MSD-E nrPDB 50 1e-06 6EF1-K nrPDB 50 1e-06 3J3U-A nrPDB 50 1e-06 1LV7-A nrPDB 50 1e-06 6EF0-L nrPDB 49 2e-06 6E11-1 nrPDB 49 2e-06 4L16-A nrPDB 49 3e-06 6EM8-A nrPDB 49 3e-06 5WVI-K nrPDB 49 3e-06 5UBV-A nrPDB 48 4e-06 1XWI-A nrPDB 48 5e-06 4ZPX-A nrPDB 48 6e-06 3PXI-A nrPDB 48 6e-06 6AZ0-A nrPDB 48 7e-06 3PXG-A nrPDB 48 7e-06 6FVU-L nrPDB 47 7e-06 5WVI-L nrPDB 47 8e-06 2ZAO-A nrPDB 47 8e-06 3K1J-A nrPDB 47 9e-06 4YPL-A nrPDB 47 1e-05 2R65-A nrPDB 47 1e-05 6HE4-H nrPDB 47 1e-05 5W0T-A nrPDB 47 1e-05 6D00-1 nrPDB 47 1e-05 6HE9-H nrPDB 47 1e-05 5VHN-D nrPDB 46 2e-05 5C18-A nrPDB 46 2e-05 6ED3-A nrPDB 46 2e-05 6MCK-A nrPDB 46 3e-05 3HU1-A nrPDB 46 3e-05 6EF0-H nrPDB 46 3e-05 4YPN-A nrPDB 46 3e-05 6QI9-D nrPDB 45 4e-05 5VHO-F nrPDB 45 5e-05 6EMW-B nrPDB 45 5e-05 5T0C-AD nrPDB 45 5e-05 5VC7-A nrPDB 45 5e-05 3SC3-A nrPDB 45 5e-05 5VHO-A nrPDB 45 6e-05 5VFU-A nrPDB 45 6e-05 6EF3-H nrPDB 45 6e-05 6B5C-A nrPDB 45 6e-05 5G4G-A nrPDB 44 8e-05 5D4W-A nrPDB 44 8e-05 5VFP-F nrPDB 44 8e-05 3CF0-A nrPDB 44 8e-05 2XSZ-A nrPDB 44 8e-05 5ZQM-A nrPDB 44 9e-05 6EPD-M nrPDB 44 1e-04 2R44-A nrPDB 44 1e-04 6EPC-H nrPDB 43 2e-04 1R6B-X nrPDB 43 2e-04 3M6A-A nrPDB 43 2e-04 2Z4R-A nrPDB 43 2e-04 5VQ9-D nrPDB 43 2e-04 5E7P-A nrPDB 43 2e-04 5KWA-A nrPDB 43 2e-04 6QEL-G nrPDB 43 2e-04 1XXI-E nrPDB 42 2e-04 3SYK-A nrPDB 42 3e-04 4CIU-A nrPDB 42 3e-04 6MAT-A nrPDB 42 3e-04 1JBK-A nrPDB 42 3e-04 3EXA-A nrPDB 42 3e-04 5OFO-C nrPDB 42 4e-04 5UJM-A nrPDB 42 4e-04 2QBY-B nrPDB 41 5e-04 5V8F-9 nrPDB 41 5e-04 4LJ8-A nrPDB 41 6e-04 1QVR-A nrPDB 41 6e-04 5VY8-A nrPDB 41 6e-04 1IY1-A nrPDB 41 6e-04 6EF0-M nrPDB 41 7e-04 4I5O-A nrPDB 41 7e-04 2QBY-A nrPDB 41 8e-04 6MDP-A nrPDB 41 9e-04 6QI8-A nrPDB 41 9e-04 5FM7-A nrPDB 41 0.001 6EMW-E nrPDB 40 0.001 4WW4-B nrPDB 40 0.001 2DHR-A nrPDB 40 0.001 4XGC-A nrPDB 40 0.001 5A5B-M nrPDB 40 0.002 2X8A-A nrPDB 40 0.002 2V1U-A nrPDB 40 0.002 4HSE-A nrPDB 39 0.002 6AMN-A nrPDB 39 0.002 2P65-A nrPDB 39 0.002 4XGU-A nrPDB 39 0.002 2NZJ-A nrPDB 39 0.003 5BQ5-A nrPDB 39 0.003 1OFI-A nrPDB 39 0.004 6GEJ-U nrPDB 38 0.005 5X06-E nrPDB 38 0.006 4Z8X-A nrPDB 38 0.006 3JCP-I nrPDB 37 0.008 1UM8-A nrPDB 37 0.009 4M4W-J nrPDB 37 0.010 3JC7-2 nrPDB 37 0.010 6FVU-I nrPDB 37 0.010 2D4E-A nrPDB 37 0.011 6EF1-I nrPDB 36 0.016 1FNN-A nrPDB 36 0.019 2QZ4-A nrPDB 36 0.023 3UPU-A nrPDB 36 0.027 3MD0-A nrPDB 36 0.033 1ZAK-A nrPDB 35 0.037 1Z47-A nrPDB 35 0.039 3GEH-A nrPDB 35 0.044 3TK1-A nrPDB 35 0.048 3NXS-A nrPDB 35 0.054 4XRP-A nrPDB 34 0.069 4XGC-D nrPDB 34 0.086 2I3B-A nrPDB 34 0.086 2YVU-A nrPDB 34 0.091 1G8P-A nrPDB 34 0.10 1V43-A nrPDB 34 0.12 4Y0A-A nrPDB 34 0.13 5JZV-A nrPDB 33 0.14 6IF2-B nrPDB 33 0.14 3IIK-A nrPDB 33 0.15 1Y63-A nrPDB 33 0.16 2WWW-A nrPDB 33 0.20 5UJ7-C nrPDB 32 0.26 2BDT-A nrPDB 32 0.27 3J15-B nrPDB 32 0.33 5L3S-B nrPDB 32 0.35 4CVN-A nrPDB 32 0.37 2YYZ-A nrPDB 32 0.40 6J5T-G nrPDB 32 0.42 5C1S-A nrPDB 31 0.56 4R7Y-A nrPDB 31 0.60 3GP8-A nrPDB 31 0.60 3F9V-A nrPDB 31 0.63 5M7N-A nrPDB 31 0.64 5GQ1-A nrPDB 31 0.74 3CM0-A nrPDB 31 0.80 4FDG-B nrPDB 31 0.85 4F4J-A nrPDB 31 0.87 5UJ7-A nrPDB 31 0.89 4YER-A nrPDB 30 1.00 2XZL-A nrPDB 30 1.0 4EUN-A nrPDB 30 1.1 4BS1-B nrPDB 30 1.1 3N70-A nrPDB 30 1.1 3BE4-A nrPDB 30 1.1 5G3Y-A nrPDB 30 1.2 5EG1-A nrPDB 30 1.2 4LZZ-A nrPDB 30 1.4 4JYC-A nrPDB 30 1.5 1EGV-G nrPDB 30 1.6 5V8F-A nrPDB 30 1.6 1NY5-A nrPDB 30 1.7 5DXT-A nrPDB 30 1.8 2GA8-A nrPDB 30 1.8 3SR0-A nrPDB 30 1.9 5WWP-B nrPDB 30 1.9 4L4U-A nrPDB 29 2.0 3H1T-A nrPDB 29 2.0 1U0J-A nrPDB 29 2.1 3CRQ-A nrPDB 29 2.1 4UJC-AB nrPDB 29 2.1 1Z6G-A nrPDB 29 2.3 1P4S-A nrPDB 29 2.3 4OI0-A nrPDB 29 2.4 5BK4-5 nrPDB 29 2.5 1G29-1 nrPDB 29 2.7 2PJZ-A nrPDB 29 2.8 4B3F-X nrPDB 29 3.1 1YE8-A nrPDB 29 3.2 2V3C-C nrPDB 29 3.2 2IYT-A nrPDB 29 3.6 1VPL-A nrPDB 29 3.6 1NI3-A nrPDB 29 4.0 1IM2-A nrPDB 28 4.5 3R8F-A nrPDB 28 4.7 1IHU-A nrPDB 28 4.7 4U00-A nrPDB 28 5.0 5JXR-A nrPDB 28 5.2 3R20-A nrPDB 28 5.4 3A4L-A nrPDB 28 5.4 4G1U-C nrPDB 28 5.6 3JC6-4 nrPDB 28 5.8 3EC2-A nrPDB 28 6.0 2IUU-A nrPDB 28 6.5 2IUT-A nrPDB 28 6.7 5U8S-7 nrPDB 28 6.8 1VIA-A nrPDB 28 6.8 1PZN-A nrPDB 28 7.2 3OZX-A nrPDB 28 7.4 >1SXJ-B nrPDB Length = 323 Score = 436 bits (1122), Expect = e-123, Method: Composition-based stats. Identities = 322/323 (99%), Positives = 323/323 (100%) Query: 1 MSKTLSLQLPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVH 60 MSKTLSLQLPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVH Sbjct: 1 MSKTLSLQLPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVH 60 Query: 61 CLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMT 120 CLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMT Sbjct: 61 CLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMT 120 Query: 121 AGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSRCAILRYSKLSDEDVLKRLLQIIK 180 AGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQS+CAILRYSKLSDEDVLKRLLQIIK Sbjct: 121 AGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSQCAILRYSKLSDEDVLKRLLQIIK 180 Query: 181 LEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAGHGLVNADNVFKIVDSPHPLIVKKML 240 LEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAGHGLVNADNVFKIVDSPHPLIVKKML Sbjct: 181 LEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAGHGLVNADNVFKIVDSPHPLIVKKML 240 Query: 241 LASNLEDSIQILRTDLWKKGYSSIDIVTTSFRVTKNLAQVKESVRLEMIKEIGLTHMRIL 300 LASNLEDSIQILRTDLWKKGYSSIDIVTTSFRVTKNLAQVKESVRLEMIKEIGLTHMRIL Sbjct: 241 LASNLEDSIQILRTDLWKKGYSSIDIVTTSFRVTKNLAQVKESVRLEMIKEIGLTHMRIL 300 Query: 301 EGVGTYLQLASMLAKIHKLNNKA 323 EGVGTYLQLASMLAKIHKLNNKA Sbjct: 301 EGVGTYLQLASMLAKIHKLNNKA 323 >2CHV-A nrPDB Length = 319 Score = 398 bits (1022), Expect = e-111, Method: Composition-based stats. Identities = 133/315 (42%), Positives = 201/315 (63%), Gaps = 5/315 (1%) Query: 11 WVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRS 70 WVEKYRP+ L ++VG E I RL+ + N+PH++ SG PG GKT + LA +L G + Sbjct: 7 WVEKYRPRTLDEVVGQDEVIQRLKGYVERKNIPHLLFSGPPGTGKTATAIALARDLFGEN 66 Query: 71 YADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRT 130 + D +E+NASD+RGIDVVR++IK FA+ + KI+ LDEAD++TA AQ ALRRT Sbjct: 67 WRDNFIEMNASDERGIDVVRHKIKEFAR-TAPIGGAPFKIIFLDEADALTADAQAALRRT 125 Query: 131 MELYSNSTRFAFACNQSNKIIEPLQSRCAILRYSKLSDEDVLKRLLQIIKLEDVKYTNDG 190 ME+YS S RF +CN ++IIEP+QSRCA+ R+ + E + KRLL+I + E VK T DG Sbjct: 126 MEMYSKSCRFILSCNYVSRIIEPIQSRCAVFRFKPVPKEAMKKRLLEICEKEGVKITEDG 185 Query: 191 LEAIIFTAEGDMRQAINNLQSTVAGHGLVNADNVFKIVDSPHPLIVKKML---LASNLED 247 LEA+I+ + GD R+AIN LQ A +V+AD +++I + P + +++ L N + Sbjct: 186 LEALIYISGGDFRKAINALQGAAAIGEVVDADTIYQITATARPEEMTELIQTALKGNFME 245 Query: 248 SIQILRTDLWKKGYSSIDIVTTSFRVTKNLAQVKESVRLEMIKEIGLTHMRILEGVGTYL 307 + ++L + + G S DIV FR ++ +K+S+++++I ++G R+ EG + Sbjct: 246 ARELLDRLMVEYGMSGEDIVAQLFREIISMP-IKDSLKVQLIDKLGEVDFRLTEGANERI 304 Query: 308 QLASMLAKIHKLNNK 322 QL + LA + L K Sbjct: 305 QLDAYLAYLSTLAKK 319 >1IQP-A nrPDB Length = 327 Score = 388 bits (997), Expect = e-108, Method: Composition-based stats. Identities = 139/319 (43%), Positives = 206/319 (64%), Gaps = 5/319 (1%) Query: 7 LQLPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHEL 66 L+ PWVEKYRPQ L DIVG + + RL+ K G+MPH++ +G PG+GKTT+ LA EL Sbjct: 11 LEKPWVEKYRPQRLDDIVGQEHIVKRLKHYVKTGSMPHLLFAGPPGVGKTTAALALAREL 70 Query: 67 LGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQQA 126 G ++ LELNASD+RGI+V+R ++K FA+ K + KI+ LDEAD++T AQQA Sbjct: 71 FGENWRHNFLELNASDERGINVIREKVKEFARTK-PIGGASFKIIFLDEADALTQDAQQA 129 Query: 127 LRRTMELYSNSTRFAFACNQSNKIIEPLQSRCAILRYSKLSDEDVLKRLLQIIKLEDVKY 186 LRRTME++S++ RF +CN S+KIIEP+QSRCAI R+ L DED+ KRL I + E ++ Sbjct: 130 LRRTMEMFSSNVRFILSCNYSSKIIEPIQSRCAIFRFRPLRDEDIAKRLRYIAENEGLEL 189 Query: 187 TNDGLEAIIFTAEGDMRQAINNLQSTVAGHGLVNADNVFKIVDSPHPLIVKKML---LAS 243 T +GL+AI++ AEGDMR+AIN LQ+ A + +NVF + P +++M+ L Sbjct: 190 TEEGLQAILYIAEGDMRRAINILQAAAALDKKITDENVFMVASRARPEDIREMMLLALKG 249 Query: 244 NLEDSIQILRTDLWKKGYSSIDIVTTSFRVTKNLAQVKESVRLEMIKEIGLTHMRILEGV 303 N + + LR L K+G S D++ + NL ++E ++ + +IG + R++EG Sbjct: 250 NFLKAREKLREILLKQGLSGEDVLVQMHKEVFNLP-IEEPKKVLLADKIGEYNFRLVEGA 308 Query: 304 GTYLQLASMLAKIHKLNNK 322 +QL ++LA+ + K Sbjct: 309 NEIIQLEALLAQFTLIGKK 327 >1SXJ-C nrPDB Length = 340 Score = 359 bits (920), Expect = 1e-99, Method: Composition-based stats. Identities = 113/317 (35%), Positives = 182/317 (57%), Gaps = 11/317 (3%) Query: 9 LPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLG 68 LPWVEKYRP+ L ++ G E I +++ +G +PH++ G PG GKT+++ LA E+ G Sbjct: 13 LPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYG 72 Query: 69 RSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALR 128 ++Y++ VLELNASDDRGIDVVRNQIK FA + G K++ILDEAD+MT AQ ALR Sbjct: 73 KNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKG-FKLIILDEADAMTNAAQNALR 131 Query: 129 RTMELYSNSTRFAFACNQSNKIIEPLQSRCAILRYSKLSDEDVLKRLLQIIKLEDVKYTN 188 R +E Y+ +TRF N ++K+ L S+C R+ L E + +R+ ++ E +K + Sbjct: 132 RVIERYTKNTRFCVLANYAHKLTPALLSQCTRFRFQPLPQEAIERRIANVLVHEKLKLSP 191 Query: 189 DGLEAIIFTAEGDMRQAINNLQSTVAG-----HGLVNADNVFKIVDSPHPLIVKKMLLAS 243 + +A+I + GDMR+ +N LQS A ++ D +++ +P P + K +L S Sbjct: 192 NAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYECCGAPRPSDL-KAVLKS 250 Query: 244 NLEDSIQILRTDLWK----KGYSSIDIVTTSFRVTKNLAQVKESVRLEMIKEIGLTHMRI 299 LED L K KG + ID++ ++ ++ E R+ ++ ++ I Sbjct: 251 ILEDDWGTAHYTLNKVRSAKGLALIDLIEGIVKILEDYELQNEETRVHLLTKLADIEYSI 310 Query: 300 LEGVGTYLQLASMLAKI 316 +G +Q ++++ I Sbjct: 311 SKGGNDQIQGSAVIGAI 327 >1SXJ-D nrPDB Length = 353 Score = 342 bits (878), Expect = 1e-94, Method: Composition-based stats. Identities = 115/330 (34%), Positives = 173/330 (52%), Gaps = 18/330 (5%) Query: 8 QLPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELL 67 Q PWVEKYRP+ L ++ + L++ K N+PHM+ G PG GKT+++ L EL Sbjct: 24 QQPWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELY 83 Query: 68 GRSYADG-VLELNASDDRGIDVVRNQIKHFAQKK---------LHLPPGKHKIVILDEAD 117 G +LELNASD+RGI +VR ++K+FA+ + P +KI+ILDEAD Sbjct: 84 GPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEAD 143 Query: 118 SMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSRCAILRYSKLSDEDVLKRLLQ 177 SMTA AQ ALRRTME YS TRF CN +II+PL S+C+ R+ L + + RL Sbjct: 144 SMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASQCSKFRFKALDASNAIDRLRF 203 Query: 178 IIKLEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAG-HGLVNADNVFKIVDS------ 230 I + E+VK + LE I+ + GD+R+ I LQS G L + N+ Sbjct: 204 ISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNITSTQVEELAGVV 263 Query: 231 PHPLIVKKM-LLASNLEDSIQILRTDLWKKGYSSIDIVTTSFRVTKNLAQVKESVRLEMI 289 PH ++++ + + S D I+ K G+S+ +V + + ++ Sbjct: 264 PHDILIEIVEKVKSGDFDEIKKYVNTFMKSGWSAASVVNQLHEYYITNDNFDTNFKNQIS 323 Query: 290 KEIGLTHMRILEGVGTYLQLASMLAKIHKL 319 + T R+ G ++QL ++L KI +L Sbjct: 324 WLLFTTDSRLNNGTNEHIQLLNLLVKISQL 353 >2CHG-A nrPDB Length = 226 Score = 306 bits (784), Expect = 8e-84, Method: Composition-based stats. Identities = 109/221 (49%), Positives = 152/221 (68%), Gaps = 1/221 (0%) Query: 11 WVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRS 70 WVEKYRP+ L ++VG E I RL+ + N+PH++ SG PG GKT + LA +L G + Sbjct: 7 WVEKYRPRTLDEVVGQDEVIQRLKGYVERKNIPHLLFSGPPGTGKTATAIALARDLFGEN 66 Query: 71 YADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRT 130 + D +E+NASD+RGIDVVR++IK FA+ + KI+ LDEAD++TA AQ ALRRT Sbjct: 67 WRDNFIEMNASDERGIDVVRHKIKEFAR-TAPIGGAPFKIIFLDEADALTADAQAALRRT 125 Query: 131 MELYSNSTRFAFACNQSNKIIEPLQSRCAILRYSKLSDEDVLKRLLQIIKLEDVKYTNDG 190 ME+YS S RF +CN ++IIEP+QSRCA+ R+ + E + KRLL+I + E VK T DG Sbjct: 126 MEMYSKSCRFILSCNYVSRIIEPIQSRCAVFRFKPVPKEAMKKRLLEICEKEGVKITEDG 185 Query: 191 LEAIIFTAEGDMRQAINNLQSTVAGHGLVNADNVFKIVDSP 231 LEA+I+ + GD R+AIN LQ A +V+AD +++I + Sbjct: 186 LEALIYISGGDFRKAINALQGAAAIGEVVDADTIYQITATA 226 >1NJG-A nrPDB Length = 250 Score = 218 bits (554), Expect = 3e-57, Method: Composition-based stats. Identities = 57/254 (22%), Positives = 111/254 (43%), Gaps = 31/254 (12%) Query: 1 MSKTLSLQLPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPH-MIISGMPGIGKTTSV 59 M ++S Q+ K+RPQ +D+VG + + L G + H + SG G+GKT+ Sbjct: 4 MGGSMSYQV-LARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIA 62 Query: 60 HCLA--------------------HELLGRSYADGVLELNASDDRGIDVVRNQIKH--FA 97 LA E+ + D ++E++A+ ++ R+ + + +A Sbjct: 63 RLLAKGLNCETGITATPCGVCDNCREIEQGRFVD-LIEIDAASRTKVEDTRDLLDNVQYA 121 Query: 98 QKKLHLPPGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSR 157 + G+ K+ ++DE ++ + AL +T+E +F A K+ + SR Sbjct: 122 PAR-----GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSR 176 Query: 158 CAILRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQAIN-NLQSTVAGH 216 C L E + +L I+ E + + L+ + AEG +R A++ Q+ +G Sbjct: 177 CLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGD 236 Query: 217 GLVNADNVFKIVDS 230 G V+ V ++ + Sbjct: 237 GQVSTQAVSAMLGT 250 >3GLF-B nrPDB Length = 395 Score = 209 bits (531), Expect = 1e-54, Method: Composition-based stats. Identities = 66/327 (20%), Positives = 137/327 (41%), Gaps = 36/327 (11%) Query: 2 SKTLSLQLPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPH-MIISGMPGIGKTTSVH 60 +S Q+ K+RPQ +D+VG + + L G + H + SG G+GKT+ Sbjct: 20 GPHMSYQV-LARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIAR 78 Query: 61 CLA--------------------HELLGRSYADGVLELNASDDRGIDVVRNQIKH--FAQ 98 LA E+ + D ++E++A+ ++ R+ + + +A Sbjct: 79 LLAKGLNCETGITATPCGVCDNCREIEQGRFVD-LIEIDAASRTKVEDTRDLLDNVQYAP 137 Query: 99 KKLHLPPGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSRC 158 + G+ K+ ++DE ++ + AL +T+E +F A K+ + SRC Sbjct: 138 AR-----GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRC 192 Query: 159 AILRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQAIN-NLQSTVAGHG 217 L E + +L I+ E + + L+ + AEG +R A++ Q+ +G G Sbjct: 193 LQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDG 252 Query: 218 LVNADNVFKIVDSPHP---LIVKKMLLASNLEDSIQILRTDLWKKGYSSIDIVTTSFRVT 274 V+ V ++ + L + + ++ +N E + L + +G ++ + Sbjct: 253 QVSTQAVSAMLGTLDDDQALSLVEAMVEANGER-VMALINEAAARGIEWEALLVEMLGLL 311 Query: 275 KNLAQVKESVRLEMIKEIGLTHMRILE 301 +A V+ S + ++ +R+ E Sbjct: 312 HRIAMVQLS-PAALGNDMAAIELRMRE 337 >1SXJ-A nrPDB Length = 516 Score = 203 bits (517), Expect = 7e-53, Method: Composition-based stats. Identities = 71/294 (24%), Positives = 120/294 (40%), Gaps = 41/294 (13%) Query: 2 SKTLSLQLPWVEKYRPQVLSDIVGNKETIDRLQ---------------QIAKDGN--MPH 44 ++ W KY P L + GNK ++ +L+ KDG+ Sbjct: 20 GPHMASDKLWTVKYAPTNLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRA 79 Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKH--------- 95 ++ G PGIGKTT+ H +A EL +LE NASD R ++ +K+ Sbjct: 80 AMLYGPPGIGKTTAAHLVAQEL-----GYDILEQNASDVRSKTLLNAGVKNALDNMSVVG 134 Query: 96 -FAQ-KKLHLPPGKHKIVILDEADSMTAGAQQALRRTMELY-SNSTRFAFACNQSN-KII 151 F ++ GKH ++I+DE D M+ G + + + + ST CN+ N + Sbjct: 135 YFKHNEEAQNLNGKHFVIIMDEVDGMSGGDRGGVGQLAQFCRKTSTPLILICNERNLPKM 194 Query: 152 EPLQSRCAILRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQAINNLQS 211 P C +++ + + RL+ I E K + ++ +I T GD+RQ IN L + Sbjct: 195 RPFDRVCLDIQFRRPDANSIKSRLMTIAIREKFKLDPNVIDRLIQTTRGDIRQVINLLST 254 Query: 212 TVAGHGLVNADNVFKIVD------SPHPLIVKKMLLASNLEDSIQILRTDLWKK 259 +N +N+ +I + P + +L + I L K Sbjct: 255 ISTTTKTINHENINEISKAWEKNIALKPFDIAHKMLDGQIYSDIGSRNFTLNDK 308 >1SXJ-E nrPDB Length = 354 Score = 203 bits (516), Expect = 8e-53, Method: Composition-based stats. Identities = 80/349 (22%), Positives = 154/349 (44%), Gaps = 46/349 (13%) Query: 11 WVEKYRPQVLSDIVGNKETIDRLQQIA-KDGNMPHMIISGMPGIGKTTSVHCLAHELLG- 68 WV+KYRP+ L+ + N+E + L+ ++ + ++PH+++ G G GK T L + G Sbjct: 4 WVDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGP 63 Query: 69 ---------RSYADGV--------------LELNASDDRGID--VVRNQIKHFAQ-KKLH 102 R + LE+ SD D V++ +K AQ +++ Sbjct: 64 GVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVD 123 Query: 103 LPPG------KHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQS 156 ++K VI++EA+S+T AQ ALRRTME YS + R C+ + II P++S Sbjct: 124 FQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKS 183 Query: 157 RCAILRYSKLSDEDVLKRLLQIIKLEDVKY-TNDGLEAIIFTAEGDMRQAINNLQSTVAG 215 +C ++R SD ++ L ++ E ++ T D L+ I + G++R ++ L+S Sbjct: 184 QCLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESMALN 243 Query: 216 HGL--------VNADNVFKIVDSPHPLIVKKMLLASNLEDSIQILRTDLWKKGYSSIDIV 267 + L + D + I ++ ++ + N + + DL + I+ Sbjct: 244 NELALKSSSPIIKPDWIIVIHKLTRKIVKERSV---NSLIECRAVLYDLLAHCIPANIIL 300 Query: 268 TTSFRVTKNLAQVKESVRLEMIKEIGLTHMRILEGVGTYLQLASMLAKI 316 ++ + + + +I+ + R+ G L +AK+ Sbjct: 301 KELTFSLLDVETLNTTNKSSIIEYSSVFDERLSLGNKAIFHLEGFIAKV 349 >3U5Z-B nrPDB Length = 324 Score = 198 bits (503), Expect = 3e-51, Method: Composition-based stats. Identities = 78/315 (24%), Positives = 141/315 (44%), Gaps = 24/315 (7%) Query: 13 EKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGM-PGIGKTTSVHCLAHELLGRSY 71 +KYRP + + + + + I G +PH+I+ PG GKTT L H++ Sbjct: 18 QKYRPSTIDECILPAFDKETFKSITSKGKIPHIILHSPSPGTGKTTVAKALCHDVNA--- 74 Query: 72 ADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEAD-SMTAGAQQALRRT 130 ++ +N SD + ID VR + +FA G+ K++++DE D S A +Q+ LR Sbjct: 75 --DMMFVNGSDCK-IDFVRGPLTNFASAASF--DGRQKVIVIDEFDRSGLAESQRHLRSF 129 Query: 131 MELYSNSTRFAFACNQSNKIIEPLQSRCAILRYSKLSDED-------VLKRLLQIIKLED 183 ME YS++ N + II+PLQSRC ++ + + +DED +++RL +I K E Sbjct: 130 MEAYSSNCSIIITANNIDGIIKPLQSRCRVITFGQPTDEDKIEMMKQMIRRLTEICKHEG 189 Query: 184 VKYTN-DGLEAIIFTAEGDMRQAINNLQSTVAGHGLVNADNVFKIVDSPHPLIVKKMLLA 242 + + + A++ D R+ I L S + G+++A + + + + +L Sbjct: 190 IAIADMKVVAALVKKNFPDFRKTIGELDS-YSSKGVLDAGILSLVTNDRGAID---DVLE 245 Query: 243 SNLEDSIQILRTDLWKKGYSSIDIVTTSFRVTKNLAQVKESVRLEMIKEIGLTHMRILEG 302 S ++ LR K V ++V + M + +G + Sbjct: 246 SLKNKDVKQLRALAPKYAADYSWFVGKLAEEI--YSRVTPQSIIRMYEIVGENNQYHGIA 303 Query: 303 VGTYLQLASMLAKIH 317 T L LA + ++ Sbjct: 304 ANTELHLAYLFIQLA 318 >3PVS-A nrPDB Length = 447 Score = 188 bits (478), Expect = 2e-48, Method: Composition-based stats. Identities = 54/239 (22%), Positives = 100/239 (41%), Gaps = 26/239 (10%) Query: 9 LPWVEKYRPQVLSDIVGNKETI---DRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHE 65 P + RP+ L+ +G + + L + + G++ MI+ G PG GKTT +A Sbjct: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIAR- 72 Query: 66 LLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQQ 125 YA+ +E ++ G+ +R I+ Q + G+ I+ +DE Q Sbjct: 73 -----YANADVERISAVTSGVKEIREAIERARQNRNA---GRRTILFVDEVHRFNKSQQD 124 Query: 126 ALRRTMELYSNSTRFAFACNQSNKIIEPLQSRCAILRYSKLSDEDVLKRLLQIIK----- 180 A +E + + A N S ++ L SR + LS ED+ + L Q ++ Sbjct: 125 AFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRG 184 Query: 181 --LEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTV-------AGHGLVNADNVFKIVDS 230 +D+ ++ AI GD R+A+N L+ +G ++ + + +I Sbjct: 185 YGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGE 243 >1HQC-A nrPDB Length = 324 Score = 147 bits (370), Expect = 7e-36, Method: Composition-based stats. Identities = 53/207 (25%), Positives = 89/207 (42%), Gaps = 23/207 (11%) Query: 16 RPQVLSDIVGNKETIDRLQ---QIAKDGNMP--HMIISGMPGIGKTTSVHCLAHEL--LG 68 RP+ L + +G + +L+ + AK P H+++ G PG+GKTT H +AHEL Sbjct: 7 RPKTLDEYIGQERLKQKLRVYLEAAKARKEPLEHLLLFGPPGLGKTTLAHVIAHELGVNL 66 Query: 69 RSYADGVLE--------LNASDDRGIDVVRNQIKHFA-QKKLHLPPGKHKIVILDEADSM 119 R + +E L S + G + ++I + Q + HL P V+ D + Sbjct: 67 RVTSGPAIEKPGDLAAILANSLEEGDILFIDEIHRLSRQAEEHLYPAMEDFVM----DIV 122 Query: 120 TAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSRCAIL-RYSKLSDEDVLKRLLQI 178 A RT+ L A + I PL SR I+ + E++ + +++ Sbjct: 123 IGQGPAA--RTIRLELPRFTLIGATTRPGLITAPLLSRFGIVEHLEYYTPEELAQGVMRD 180 Query: 179 IKLEDVKYTNDGLEAIIFTAEGDMRQA 205 +L V+ T + I + G MR A Sbjct: 181 ARLLGVRITEEAALEIGRRSRGTMRVA 207 >1IN6-A nrPDB Length = 334 Score = 103 bits (257), Expect = 8e-23, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 103/262 (39%), Gaps = 26/262 (9%) Query: 12 VEKYRPQVLSDIVGNKETIDRLQQIAKDGNMP-----HMIISGMPGIGKTTSVHCLAHEL 66 V+ RP+ L + +G + +L + M H++++G PG+G+TT H +A EL Sbjct: 16 VQFLRPKSLDEFIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGRTTLAHIIASEL 75 Query: 67 LGRSYA---------DGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEAD 117 + + + S +RG + ++I + L + + + D Sbjct: 76 QTNIHVTSGPVLVKQGDMAAILTSLERGDVLFIDEIHRLNKAVEELL---YSAIEDFQID 132 Query: 118 SMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSRCAIL-RYSKLSDEDVLKRLL 176 M A +++ + A +S + PL+SR I+ + +++ + + Sbjct: 133 IMIGKGPSA--KSIRIDIQPFTLVGATTRSGLLSSPLRSRFGIILELDFYTVKELKEIIK 190 Query: 177 QIIKLEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAGHGLVNADNVFKIVDSPHPLIV 236 + L DV+ + E I + G R AI + +V AD + +++ Sbjct: 191 RAASLMDVEIEDAAAEMIAKRSRGTPRIAIRLTKRVRDMLTVVKADRINT------DIVL 244 Query: 237 KKMLLASNLEDSIQILRTDLWK 258 K M + + ++ + + K Sbjct: 245 KTMEVLNIDDEGLDEFDRKILK 266 >6BLB-A nrPDB Length = 355 Score = 90.2 bits (222), Expect = 1e-18, Method: Composition-based stats. Identities = 45/210 (21%), Positives = 82/210 (39%), Gaps = 22/210 (10%) Query: 16 RPQVLSDIVGNKETIDRLQQIAKDGN-----MPHMIISGMPGIGKTTSVHCLAHE--LLG 68 RP L+D +G ++++ + H +I G PG+GKTT + +A E + Sbjct: 28 RPLKLADYIGQPSVREQMELFIHAARGRQEALDHTLIFGPPGLGKTTLANIIAQEMGVSI 87 Query: 69 RSYADGVLE-------LNASDDRGIDVVRNQIKHFAQ-KKLHLPPGKHKIVILDEADSMT 120 +S + VLE L + + G + ++I + + L P + D M Sbjct: 88 KSTSGPVLERPGDLAALLTNLEAGDVLFVDEIHRLSPIVEEVLYPAMEDF----QLDIMI 143 Query: 121 AGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSRCAIL-RYSKLSDEDVLKRLLQII 179 A R+++L A ++ + PL+ R I+ R + ED+ + + Sbjct: 144 GEGPAA--RSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQRLEFYNVEDLATIVSRSA 201 Query: 180 KLEDVKYTNDGLEAIIFTAEGDMRQAINNL 209 + ++ G I A G R A L Sbjct: 202 GILGLEIEPQGAAEIAKRARGTPRIANRLL 231 >3PFI-A nrPDB Length = 338 Score = 87.5 bits (215), Expect = 8e-18, Method: Composition-based stats. Identities = 33/227 (14%), Positives = 76/227 (33%), Gaps = 22/227 (9%) Query: 16 RPQVLSDIVGNKETIDRLQQIAKDGN-----MPHMIISGMPGIGKTTSVHCLAHELLG-- 68 RP +G + L + H++ SG G+GKTT + +++E+ Sbjct: 24 RPSNFDGYIGQESIKKNLNVFIAAAKKRNECLDHILFSGPAGLGKTTLANIISYEMSANI 83 Query: 69 RSYADGVLELNA-------SDDRGIDVVRNQIKHFAQK-KLHLPPGKHKIVILDEADSMT 120 ++ A ++E + + G + ++I + + L P D + Sbjct: 84 KTTAAPMIEKSGDLAAILTNLSEGDILFIDEIHRLSPAIEEVLYPAMEDY----RLDIII 139 Query: 121 AGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSRCA-ILRYSKLSDEDVLKRLLQII 179 A +T+++ A ++ + PL+ R R D ++ L + Sbjct: 140 GSGPAA--QTIKIDLPKFTLIGATTRAGMLSNPLRDRFGMQFRLEFYKDSELALILQKAA 197 Query: 180 KLEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAGHGLVNADNVFK 226 + I + R A+ L+ + + + + + Sbjct: 198 LKLNKTCEEKAALEIAKRSRSTPRIALRLLKRVRDFADVNDEEIITE 244 >4D81-A nrPDB Length = 283 Score = 63.6 bits (153), Expect = 1e-10, Method: Composition-based stats. Identities = 57/280 (20%), Positives = 103/280 (36%), Gaps = 60/280 (21%) Query: 12 VEKYRPQ-VLSDIVGNKETIDRLQQIA----------KDGNMPHMIISGMPGIGKTTSVH 60 V K +P+ L++IVG ++ + L++ G +++ G PG GKT Sbjct: 4 VMKEKPKVTLNEIVGLEDVKEALKEAVVYPSKRPDLFPLGWPRGILLYGPPGCGKTMIAA 63 Query: 61 CLAHELLGRSYADGVLELNASDDRGI---DVVRNQIKHFAQKKL-HLPPGKHKIVILDEA 116 +A+EL + ++A+ + +N K F + K I+ +DE Sbjct: 64 AVANELDSE-----FIHVDAASIMSKWLGEAEKNVAKIFKTARELSKKENKPAIIFIDEL 118 Query: 117 DSMTAG----------AQQALRRTME-----LYSNSTRFAFACNQSNKIIEPLQSRCAIL 161 D++ A + + M+ + A N+ ++ EP R Sbjct: 119 DALLASYTSEVGGEARVRNQFLKEMDGLADKNEISKVYVIGATNKPWRLDEPFLRRFQKR 178 Query: 162 RYSKLSDEDVLKRLLQIIKL--EDVKYTNDG-LEAIIFTAEGDMRQAINNLQSTVAGHGL 218 Y L D+ RL +++K VK + LE + +G Sbjct: 179 IYITLPDK--AHRL-ELLKHYSSKVKLDPNVNLEELAELTDG------------------ 217 Query: 219 VNADNVFKIVDSPHPLIVKKMLLASNLEDSIQILRTDLWK 258 A ++ IV S H +VK+M NL++ I D + Sbjct: 218 YTASDIRDIVQSAHMRVVKEMFEK-NLQEPRAINMDDFRE 256 >2CE7-A nrPDB Length = 476 Score = 59.4 bits (142), Expect = 2e-09, Method: Composition-based stats. Identities = 56/288 (19%), Positives = 94/288 (32%), Gaps = 61/288 (21%) Query: 15 YRPQ-----VLSDIVGNKETIDRLQQIAKDGNMPH------------MIISGMPGIGKTT 57 Y+P D+ G +E I+ L+++ + P +++ G PG GKT Sbjct: 5 YKPSGNKRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTL 64 Query: 58 SVHCLAHE-------LLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKI 110 +A E + G + + + + A+ R + FAQ K H P I Sbjct: 65 LARAVAGEANVPFFHISGSDFVELFVGVGAARVRDL---------FAQAKAHAPC----I 111 Query: 111 VILDEADSMTAGAQQALR-------RTME--------LYSNSTRFAFACNQSNKIIEPLQ 155 V +DE D++ L +T+ S A I++P Sbjct: 112 VFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFDSKEGIIVMAATNRPDILDPAL 171 Query: 156 SRCAILRYS---KLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEG----DMRQAINN 208 R D K++L+I + LE I G D+ +N Sbjct: 172 LRPGRFDKKIVVDPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNE 231 Query: 209 --LQSTVAGHGLVNADNVFKIVDSPHPLIVKKMLLASNLEDSIQILRT 254 L + G + + + +D +K LL S E I Sbjct: 232 AALLAAREGRDKITMKDFEEAIDRVIAGPARKSLLISPAEKRIIAYHE 279 >5Z6Q-A nrPDB Length = 392 Score = 58.6 bits (140), Expect = 4e-09, Method: Composition-based stats. Identities = 42/210 (20%), Positives = 68/210 (32%), Gaps = 36/210 (17%) Query: 20 LSDIVGNKETIDRLQQIAKDGNMP------------HMIISGMPGIGKTTSVHCLAHELL 67 DI G LQ+I ++ +++ G PG GKT +A E Sbjct: 117 FDDIAGQDLAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESN 176 Query: 68 GRSYADGVLELNAS-DDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMT----AG 122 + L + G +VR FA + P I+ +DE DS+ G Sbjct: 177 ATFFNISAASLTSKYVGEGEKLVRAL---FAVARELQPS----IIFIDEVDSLLCERREG 229 Query: 123 AQQALRRTMELYSNSTRFA-----------FACNQSNKIIEPLQSRCAILRYSKLSDEDV 171 A RR + A N+ ++ E + R Y L +E+ Sbjct: 230 EHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFIKRVYVSLPNEET 289 Query: 172 LKRLLQIIK-LEDVKYTNDGLEAIIFTAEG 200 LL+ + + T L + +G Sbjct: 290 RLLLLKNLLCKQGSPLTQKELAQLARMTDG 319 >4LCB-A nrPDB Length = 367 Score = 57.5 bits (137), Expect = 7e-09, Method: Composition-based stats. Identities = 54/278 (19%), Positives = 98/278 (35%), Gaps = 55/278 (19%) Query: 11 WVEKYRPQ-VLSDIVGNKETIDRLQQIA----------KDGNMPHMIISGMPGIGKTTSV 59 + K +P+ SDIVG + + L++ G +++ G PG GKT Sbjct: 88 LIMKEKPKVSFSDIVGLDDVKEALKEAIIYPSKRPDLFPLGWPRGILLYGPPGNGKTMLA 147 Query: 60 HCLAHELLGRSYADGVLELNASDDRGI---DVVRNQIKHFAQKKLHL-PPGKHKIVILDE 115 +A+E+ + ++A+ + +N K F + + K I+ +DE Sbjct: 148 AAVANEIDSY-----FIHVDAASIMSKWLGEAEKNVAKIFNTAREYSKKDNKPAIIFVDE 202 Query: 116 ADSMTAG----------AQQALRRTME-----LYSNSTRFAFACNQSNKIIEPLQSRCAI 160 D++ + + M+ + A N+ ++ EP R Sbjct: 203 IDALLGTYTSEVGGEVRVRNQFLKEMDGIMDKNENYMVYVIGATNKPWRLDEPFLRRFQK 262 Query: 161 LRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAGHGLVN 220 Y L D + L + VK N L+ + EG + Sbjct: 263 RIYVPLPDFNQRLALFKYYTS-KVKLGNVDLQELAKMTEG------------------YS 303 Query: 221 ADNVFKIVDSPHPLIVKKMLLASNLEDSIQILRTDLWK 258 A ++ IV S H +VK+M NL + +I D + Sbjct: 304 ASDIRDIVQSAHMRVVKEMFEK-NLSEPREITMDDFKE 340 >6NYV-B nrPDB Length = 314 Score = 55.9 bits (133), Expect = 3e-08, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 69/209 (33%), Gaps = 37/209 (17%) Query: 22 DIVGNKETIDRLQQIAKDGNMP------------HMIISGMPGIGKTTSVHCLAHELLGR 69 DI G LQ++ ++ +++ G PG GKT +A E Sbjct: 40 DIAGQDVAKQALQEMVILPSVRPELFTGLRAPAKGLLLFGPPGNGKTLLARAVATECSAT 99 Query: 70 SYADGVLELNASDDR-GIDVVRNQIKHFAQKKLHLPPGKHKIVILDEAD----SMTAGAQ 124 L + G +VR FA + P I+ +DE D ++ Sbjct: 100 FLNISAASLTSKYVGDGEKLVRAL---FAVARHMQPS----IIFIDEVDSLLSERSSSEH 152 Query: 125 QALRRTMELYS------------NSTRFAFACNQSNKIIEPLQSRCAILRYSKLSDEDVL 172 +A RR + + A N+ ++ E R Y L DE Sbjct: 153 EASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDEQTR 212 Query: 173 KRLL-QIIKLEDVKYTNDGLEAIIFTAEG 200 + LL ++++ + + L + +G Sbjct: 213 ELLLNRLLQKQGSPLDTEALRRLAKITDG 241 >6B5D-A nrPDB Length = 309 Score = 55.5 bits (132), Expect = 3e-08, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 70/211 (33%), Gaps = 35/211 (16%) Query: 19 VLSDIVGNKETIDRLQQIAKDGNM------------PHMIISGMPGIGKTTSVHCLAHEL 66 L DI+G + L + + M+++G PG GKT +A E Sbjct: 28 SLDDIIGMHDVKQVLHEAVTLPLLVPEFFQGLRSPWKAMVLAGPPGTGKTLIARAIASES 87 Query: 67 LGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSM-----TA 121 + +L++ + + + A+ I+ +DE D++ + Sbjct: 88 SSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAP------SIIFIDEIDTLGGQRGNS 141 Query: 122 GAQQALRRTMELY------------SNSTRFAFACNQSNKIIEPLQSRCAILRYSKLSDE 169 G +A RR + S A N ++ E L+ R + L D Sbjct: 142 GEHEASRRVKSEFLVQMDGSQNKFDSRRVFVLAATNIPWELDEALRRRFEKRIFIPLPDI 201 Query: 170 DVLKRLLQIIKLEDVKYTNDGLEAIIFTAEG 200 D K+L++ K + + EG Sbjct: 202 DARKKLIEKSMEGTPKSDEINYDDLAARTEG 232 >6AP1-A nrPDB Length = 519 Score = 55.5 bits (132), Expect = 3e-08, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 70/207 (33%), Gaps = 33/207 (15%) Query: 21 SDIVGNKETIDRLQQIA-KDGNMPHM-----------IISGMPGIGKTTSVHCLAHELLG 68 D+ G + + L++ PH+ ++ G PG GK+ +A E Sbjct: 34 EDVAGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGTGKSYLAKAVATEANS 93 Query: 69 RSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTA----GAQ 124 ++ +L + + + Q+ FA + + P I+ +DE D++T G Sbjct: 94 TFFSVSSSDLVSKWMGESEKLVKQL--FAMARENKPS----IIFIDEVDALTGTRGEGES 147 Query: 125 QALRRTMELY----------SNSTRFAFACNQSNKIIEPLQSRCAILRYSKLSDEDVLKR 174 +A RR S A N ++ ++ R Y L D Sbjct: 148 EASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQLDSAIRRRFERRIYIPLPDLAARTT 207 Query: 175 LLQIIKLED-VKYTNDGLEAIIFTAEG 200 + +I + T + + EG Sbjct: 208 MFEINVGDTPCVLTKEDYRTLGAMTEG 234 >5EQT-A nrPDB Length = 257 Score = 54.8 bits (130), Expect = 5e-08, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 62/173 (35%), Gaps = 23/173 (13%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLP 104 +++ G PG GKT LAHE+ EL + +++ A++K Sbjct: 42 VLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAP-- 99 Query: 105 PGKHKIVILDEADSM--------TAGAQQALRRTMEL--------YSNSTRFAFACNQSN 148 I+ +DE D++ T G ++ R M+L + + A N+ + Sbjct: 100 ----TIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPD 155 Query: 149 KIIEPLQSRCAILRYSKLSDEDVLKRLLQIIKL-EDVKYTNDGLEAIIFTAEG 200 + L R ++ D RL + +K L AI EG Sbjct: 156 ILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKLKGVDLRAIAEMTEG 208 >4LGM-A nrPDB Length = 295 Score = 54.4 bits (129), Expect = 6e-08, Method: Composition-based stats. Identities = 49/273 (17%), Positives = 94/273 (34%), Gaps = 58/273 (21%) Query: 16 RPQ-VLSDIVGNKETIDRLQQIA----------KDGNMPHMIISGMPGIGKTTSVHCLAH 64 +P+ DIVG + + L++ G +++ G PG GKT +A+ Sbjct: 20 KPKVSFKDIVGLDDVKEALREAIIYPTKRPDLFPLGWPRGILLYGPPGCGKTMIAAAVAN 79 Query: 65 ELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQ-----KKLHLPPGKHKIVILDEADSM 119 E+ ++L+A+ + K+ A ++ K I+ +D+ D++ Sbjct: 80 EIDS-----IFMQLDAASVMS-KWLGEAEKNVANVFKMAREESKKQNKPAIIFIDQLDAL 133 Query: 120 TA----------GAQQALRRTME---LYSNSTR--FAFACNQSNKIIEPLQSRCAILRYS 164 + + M+ S + + A N+ ++ E R Y Sbjct: 134 LGVYSTEVGGEARVRNQFLKEMDGLLDKSENYKVYVIGATNKPWRLDEAFLRRFQKRIYV 193 Query: 165 KLSDEDVLKRLLQIIKLEDVKYTNDG-LEAIIFTAEGDMRQAINNLQSTVAGHGLVNADN 223 L D + L + +K + LE + EG A + Sbjct: 194 PLPDYEQRLSLFKYYTS-KIKLDTEVSLEELAKLTEG------------------YTASD 234 Query: 224 VFKIVDSPHPLIVKKMLLASNLEDSIQILRTDL 256 + IV + H +VK+M +NL + I D Sbjct: 235 IRDIVQAAHIKVVKEM-FKNNLGEPRTITLQDF 266 >6EF2-J nrPDB Length = 262 Score = 54.4 bits (129), Expect = 7e-08, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 59/177 (33%), Gaps = 30/177 (16%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNAS-DDRGIDVVRNQIKHFAQKKLHL 103 +I+ G PG GKT +AH + EL G +VR F + H Sbjct: 42 VILYGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVREL---FVMAREHA 98 Query: 104 PPGKHKIVILDEADSM-------TAGAQQALRRTME---------LYSNSTRFAFACNQS 147 P I+ +DE DS+ + G ++RTM S + + A N+ Sbjct: 99 PS----IIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRL 154 Query: 148 NKIIEPLQSRCAI---LRYSKLSDEDVLKRLLQIIKLEDVKYTNDG-LEAIIFTAEG 200 + + L I + + S + L I + T L + G Sbjct: 155 DILDPALLRPGRIDRKIEFPPPSVAARAEILR--IHSRKMNLTRGINLRKVAEKMNG 209 >6MSK-B nrPDB Length = 440 Score = 54.0 bits (128), Expect = 8e-08, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 97/283 (34%), Gaps = 63/283 (22%) Query: 12 VEKYRPQVLSDIVGNKETIDRLQQIAKDGNMP-------------HMIISGMPGIGKTTS 58 VEK + +DI G I +++ + +I+ G PG GKT Sbjct: 176 VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLL 235 Query: 59 VHCLAHE---LLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDE 115 +A++ R +++ D G +VR F + H P IV +DE Sbjct: 236 AKAVANQTSATFLRVVGSELIQKYLGD--GPKLVREL---FRVAEEHAPS----IVFIDE 286 Query: 116 ADSM-------TAGAQQALRRTMELYSNS---------TRFAFACNQSNKIIEPLQSRCA 159 D++ +G ++ ++RTM N + A N+ + L Sbjct: 287 IDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGR 346 Query: 160 I---LRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAGH 216 I + + L DE KR+ QI T+ + + +A Sbjct: 347 IDRKIEF-PLPDEKTKKRIFQI-----------------HTSRMTLADDVTLDDLIMAKD 388 Query: 217 GLVNADNVFKIVDSPHPLIVKKMLLASNLEDSIQILRTDLWKK 259 L AD + I + +++ + ED + L+KK Sbjct: 389 DLSGAD-IKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKK 430 >3WHK-A nrPDB Length = 270 Score = 54.0 bits (128), Expect = 8e-08, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 77/215 (35%), Gaps = 38/215 (17%) Query: 16 RPQ-VLSDIVGNKETIDRLQQIAK-DGNMPHM------------IISGMPGIGKTTSVHC 61 RP +DI G K+ + L++ + P + ++ G PG GKT Sbjct: 11 RPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKA 70 Query: 62 LAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSM-- 119 +AHE+ EL + +++ A++K I+ +DE D++ Sbjct: 71 IAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAP------TIIFIDEIDAIGA 124 Query: 120 ------TAGAQQALRRTMEL--------YSNSTRFAFACNQSNKIIEPLQS--RCAILRY 163 T G ++ R M+L + + A N+ + + L R L Sbjct: 125 KRLDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIE 184 Query: 164 SKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTA 198 L DE ++LQI + + + + + Sbjct: 185 VPLPDEFSRAQILQIHSRKMTTDDDINWQELARST 219 >5VHF-B nrPDB Length = 340 Score = 54.0 bits (128), Expect = 8e-08, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 97/283 (34%), Gaps = 63/283 (22%) Query: 12 VEKYRPQVLSDIVGNKETIDRLQQIAKDGNMP-------------HMIISGMPGIGKTTS 58 VEK + +DI G I +++ + +I+ G PG GKT Sbjct: 84 VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLL 143 Query: 59 VHCLAHE---LLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDE 115 +A++ R +++ D G +VR F + H P IV +DE Sbjct: 144 AKAVANQTSATFLRVVGSELIQKYLGD--GPKLVREL---FRVAEEHAPS----IVFIDE 194 Query: 116 ADSM-------TAGAQQALRRTMELYSNS---------TRFAFACNQSNKIIEPLQSRCA 159 D++ +G ++ ++RTM N + A N+ + L Sbjct: 195 IDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGR 254 Query: 160 I---LRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAGH 216 I + + L DE KR+ QI T+ + + +A Sbjct: 255 IDRKIEF-PLPDEKTKKRIFQI-----------------HTSRMTLADDVTLDDLIMAKD 296 Query: 217 GLVNADNVFKIVDSPHPLIVKKMLLASNLEDSIQILRTDLWKK 259 L AD + I + +++ + ED + L+KK Sbjct: 297 DLSGAD-IKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKK 338 >3D8B-A nrPDB Length = 357 Score = 53.6 bits (127), Expect = 1e-07, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 73/211 (34%), Gaps = 36/211 (17%) Query: 17 PQVLSDIVGNKETIDRLQQIAK------------DGNMPHMIISGMPGIGKTTSVHCLAH 64 P DI G + +++I G +++ G PG GKT C+A Sbjct: 80 PVNWEDIAGVEFAKATIKEIVVWPMLRPDIFTGLRGPPKGILLFGPPGTGKTLIGKCIAS 139 Query: 65 ELLGRSYADGVLELNAS-DDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMT--- 120 + ++ L + G +VR FA + P ++ +DE DS+ Sbjct: 140 QSGATFFSISASSLTSKWVGEGEKMVRAL---FAVARCQQPA----VIFIDEIDSLLSQR 192 Query: 121 AGAQQALRRTMELY------------SNSTRFAFACNQSNKIIEPLQSRCAILRYSKLSD 168 + R ++ + A N+ +I E + R Y L + Sbjct: 193 GDGEHESSRRIKTEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARRRLVKRLYIPLPE 252 Query: 169 EDVLKRL-LQIIKLEDVKYTNDGLEAIIFTA 198 K++ + ++ E + + +E I+ + Sbjct: 253 ASARKQIVINLMSKEQCCLSEEEIEQIVQQS 283 >5WC0-A nrPDB Length = 472 Score = 53.6 bits (127), Expect = 1e-07, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 70/211 (33%), Gaps = 35/211 (16%) Query: 19 VLSDIVGNKETIDRLQQIAKDGNM------------PHMIISGMPGIGKTTSVHCLAHEL 66 L DI+G + L + + M+++G PG GKT +A E Sbjct: 191 SLDDIIGMHDVKQVLHEAVTLPLLVPEFFQGLRSPWKAMVLAGPPGTGKTLIARAIASES 250 Query: 67 LGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSM-----TA 121 + +L++ + + + A+ I+ +D+ D++ + Sbjct: 251 SSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAP------SIIFIDQIDTLGGQRGNS 304 Query: 122 GAQQALRRTMELY------------SNSTRFAFACNQSNKIIEPLQSRCAILRYSKLSDE 169 G +A RR + S A N ++ E L+ R + L D Sbjct: 305 GEHEASRRVKSEFLVQMDGSQNKFDSRRVFVLAATNIPWELDEALRRRFEKRIFIPLPDI 364 Query: 170 DVLKRLLQIIKLEDVKYTNDGLEAIIFTAEG 200 D K+L++ K + + EG Sbjct: 365 DARKKLIEKSMEGTPKSDEINYDDLAARTEG 395 >5VFP-B nrPDB Length = 389 Score = 53.6 bits (127), Expect = 1e-07, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 97/283 (34%), Gaps = 63/283 (22%) Query: 12 VEKYRPQVLSDIVGNKETIDRLQQIAKDGNMP-------------HMIISGMPGIGKTTS 58 VEK + +DI G I +++ + +I+ G PG GKT Sbjct: 125 VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLL 184 Query: 59 VHCLAHE---LLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDE 115 +A++ R +++ D G +VR F + H P IV +DE Sbjct: 185 AKAVANQTSATFLRVVGSELIQKYLGD--GPKLVREL---FRVAEEHAPS----IVFIDE 235 Query: 116 ADSM-------TAGAQQALRRTMELYSNS---------TRFAFACNQSNKIIEPLQSRCA 159 D++ +G ++ ++RTM N + A N+ + L Sbjct: 236 IDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGR 295 Query: 160 I---LRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAGH 216 I + + L DE KR+ QI T+ + + +A Sbjct: 296 IDRKIEF-PLPDEKTKKRIFQI-----------------HTSRMTLADDVTLDDLIMAKD 337 Query: 217 GLVNADNVFKIVDSPHPLIVKKMLLASNLEDSIQILRTDLWKK 259 L AD + I + +++ + ED + L+KK Sbjct: 338 DLSGAD-IKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKK 379 >5VHO-B nrPDB Length = 267 Score = 53.2 bits (126), Expect = 1e-07, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 97/283 (34%), Gaps = 63/283 (22%) Query: 12 VEKYRPQVLSDIVGNKETIDRLQQIAKDGNMP-------------HMIISGMPGIGKTTS 58 VEK + +DI G I +++ + +I+ G PG GKT Sbjct: 10 VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLL 69 Query: 59 VHCLAHE---LLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDE 115 +A++ R +++ D G +VR F + H P IV +DE Sbjct: 70 AKAVANQTSATFLRVVGSELIQKYLGD--GPKLVREL---FRVAEEHAPS----IVFIDE 120 Query: 116 ADSM-------TAGAQQALRRTMELYSNS---------TRFAFACNQSNKIIEPLQSRCA 159 D++ +G ++ ++RTM N + A N+ + L Sbjct: 121 IDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGR 180 Query: 160 I---LRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAGH 216 I + + L DE KR+ QI T+ + + +A Sbjct: 181 IDRKIEF-PLPDEKTKKRIFQI-----------------HTSRMTLADDVTLDDLIMAKD 222 Query: 217 GLVNADNVFKIVDSPHPLIVKKMLLASNLEDSIQILRTDLWKK 259 L AD + I + +++ + ED + L+KK Sbjct: 223 DLSGAD-IKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKK 264 >3EIH-A nrPDB Length = 340 Score = 53.2 bits (126), Expect = 1e-07, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 70/207 (33%), Gaps = 33/207 (15%) Query: 21 SDIVGNKETIDRLQQIA-KDGNMPHM-----------IISGMPGIGKTTSVHCLAHELLG 68 D+ G + + L++ PH+ ++ G PG GK+ +A E Sbjct: 36 EDVAGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGTGKSYLAKAVATEANS 95 Query: 69 RSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTA----GAQ 124 ++ +L + + + Q+ FA + + P I+ +D+ D++T G Sbjct: 96 TFFSVSSSDLVSKWMGESEKLVKQL--FAMARENKPS----IIFIDQVDALTGTRGEGES 149 Query: 125 QALRRTMELY----------SNSTRFAFACNQSNKIIEPLQSRCAILRYSKLSDEDVLKR 174 +A RR S A N ++ ++ R Y L D Sbjct: 150 EASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQLDSAIRRRFERRIYIPLPDLAARTT 209 Query: 175 LLQIIKLED-VKYTNDGLEAIIFTAEG 200 + +I + T + + EG Sbjct: 210 MFEINVGDTPCVLTKEDYRTLGAMTEG 236 >3JCO-J nrPDB Length = 405 Score = 53.2 bits (126), Expect = 2e-07, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 59/177 (33%), Gaps = 30/177 (16%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNAS-DDRGIDVVRNQIKHFAQKKLHL 103 +I+ G PG GKT +AH + EL G +VR F + H Sbjct: 185 VILYGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVREL---FVMAREHA 241 Query: 104 PPGKHKIVILDEADSM-------TAGAQQALRRTME---------LYSNSTRFAFACNQS 147 P I+ +DE DS+ + G ++RTM S + + A N+ Sbjct: 242 PS----IIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRL 297 Query: 148 NKIIEPLQSRCAI---LRYSKLSDEDVLKRLLQIIKLEDVKYTNDG-LEAIIFTAEG 200 + + L I + + S + L I + T L + G Sbjct: 298 DILDPALLRPGRIDRKIEFPPPSVAARAEILR--IHSRKMNLTRGINLRKVAEKMNG 352 >5XMK-A nrPDB Length = 437 Score = 52.4 bits (124), Expect = 3e-07, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 71/207 (34%), Gaps = 33/207 (15%) Query: 21 SDIVGNKETIDRLQQIA-KDGNMPHM-----------IISGMPGIGKTTSVHCLAHELLG 68 D+ G + + L++ PH+ ++ G PG GK+ +A E Sbjct: 133 EDVAGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGTGKSYLAKAVATEANS 192 Query: 69 RSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMT-----AGA 123 ++ +L + + + Q+ FA + + P I+ +D+ D++T + Sbjct: 193 TFFSVSSSDLVSKWMGESEKLVKQL--FAMARENKPS----IIFIDQVDALTGTRGEGES 246 Query: 124 QQALRRTMELY---------SNSTRFAFACNQSNKIIEPLQSRCAILRYSKLSDEDVLKR 174 + + R EL S A N ++ ++ R Y L D Sbjct: 247 EASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQLDSAIRRRFERRIYIPLPDLAARTT 306 Query: 175 LLQIIKLED-VKYTNDGLEAIIFTAEG 200 + +I + T + + EG Sbjct: 307 MFEINVGDTPCVLTKEDYRTLGAMTEG 333 >5VHP-E nrPDB Length = 262 Score = 51.7 bits (122), Expect = 4e-07, Method: Composition-based stats. Identities = 40/185 (21%), Positives = 72/185 (38%), Gaps = 34/185 (18%) Query: 46 IISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASD--DRGIDVVRNQIKH-FAQKKLH 102 ++ G PG GKT +A +L L++ +S D+ I I+ F + H Sbjct: 44 LLYGPPGTGKTLLARAVASQLDC-----NFLKVVSSSIVDKYIGESARLIREMFNYARDH 98 Query: 103 LPPGKHKIVILDEADSM--------TAGAQQALRRTMELYSN--------STRFAFACNQ 146 P I+ +DE D++ T+ ++ R MEL + + A N+ Sbjct: 99 QPC----IIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNR 154 Query: 147 SNKIIEPLQSRCAILR--YSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEG---- 200 + + L + R + L +E +L+I K+ EAI+ ++G Sbjct: 155 PDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGA 214 Query: 201 DMRQA 205 D+R Sbjct: 215 DLRNV 219 >3H4M-A nrPDB Length = 285 Score = 51.3 bits (121), Expect = 6e-07, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 61/181 (33%), Gaps = 38/181 (20%) Query: 45 MIISGMPGIGKTTSVHCLAHE-------LLGRSYADGVLELNASDDRGIDVVRNQIKHFA 97 +++ G PG GKT +A E ++G + AS + I F Sbjct: 54 ILLYGPPGTGKTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDI---------FK 104 Query: 98 QKKLHLPPGKHKIVILDEA--------DSMTAGAQQALRRTMELYSN--------STRFA 141 K P I+ +DE D++T G ++ R M+L + + Sbjct: 105 LAKEKAPS----IIFIDEIDAIAAKRTDALTGGDREVQRTLMQLLAEMDGFDARGDVKII 160 Query: 142 FACNQSNKIIEPLQSRCAILRYSKLSDEDVLKRLLQIIKL-EDVKYTNDG-LEAIIFTAE 199 A N+ + + + R ++ D RL + + D LE I E Sbjct: 161 GATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTE 220 Query: 200 G 200 G Sbjct: 221 G 221 >5M32-h nrPDB Length = 355 Score = 51.3 bits (121), Expect = 6e-07, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 54/151 (35%), Gaps = 27/151 (17%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDD-RGIDVVRNQIKHFAQKKLHL 103 +++ G PG GKT +AH EL G +VR F + H Sbjct: 149 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVREL---FVMAREHA 205 Query: 104 PPGKHKIVILDEADSM--------TAGAQQALRRTMEL--------YSNSTRFAFACNQS 147 P I+ +DE DS+ + G + R +EL + + + A N+ Sbjct: 206 PS----IIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRI 261 Query: 148 NKIIEPLQSRCAI---LRYSKLSDEDVLKRL 175 + + L I + + ++E L L Sbjct: 262 DILDSALLRPGRIDRKIEFPPPNEEARLDIL 292 >2XSZ-D nrPDB Length = 378 Score = 50.9 bits (120), Expect = 7e-07, Method: Composition-based stats. Identities = 41/183 (22%), Positives = 69/183 (37%), Gaps = 24/183 (13%) Query: 49 GMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGID-VVRNQIKHFAQKKLHLPPGK 107 G PG+ T S+H + +++ G L L + D I VR QI A+ GK Sbjct: 149 GPPGVVHTVSLHEI--DVINSRT-QGFLALFSGDTGEIKSEVREQIN--AKVAEWREEGK 203 Query: 108 HKIV----ILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQ------------SNKII 151 +I+ +DE + + L R +E A N+ + I Sbjct: 204 AEIIPGVLFIDEVHMLDIESFSFLNRALESDMAPV-LIMATNRGITRIRGTSYQSPHGIP 262 Query: 152 EPLQSRCAILRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTA-EGDMRQAINNLQ 210 L R I+ + S++D + L + EDV+ + D + E +R AI + Sbjct: 263 IDLLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLIT 322 Query: 211 STV 213 + Sbjct: 323 AAS 325 >5VHP-C nrPDB Length = 266 Score = 50.9 bits (120), Expect = 7e-07, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 54/151 (35%), Gaps = 27/151 (17%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDD-RGIDVVRNQIKHFAQKKLHL 103 +++ G PG GKT +AH EL G +VR F + H Sbjct: 57 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVREL---FVMAREHA 113 Query: 104 PPGKHKIVILDEADSM--------TAGAQQALRRTMEL--------YSNSTRFAFACNQS 147 P I+ +DE DS+ + G + R +EL + + + A N+ Sbjct: 114 PS----IIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRI 169 Query: 148 NKIIEPLQSRCAI---LRYSKLSDEDVLKRL 175 + + L I + + ++E L L Sbjct: 170 DILDSALLRPGRIDRKIEFPPPNEEARLDIL 200 >5GJQ-J nrPDB Length = 406 Score = 50.9 bits (120), Expect = 8e-07, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 54/151 (35%), Gaps = 27/151 (17%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDD-RGIDVVRNQIKHFAQKKLHL 103 +++ G PG GKT +AH EL G +VR F + H Sbjct: 186 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVREL---FVMAREHA 242 Query: 104 PPGKHKIVILDEADSM--------TAGAQQALRRTMEL--------YSNSTRFAFACNQS 147 P I+ +DE DS+ + G + R +EL + + + A N+ Sbjct: 243 PS----IIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRI 298 Query: 148 NKIIEPLQSRCAI---LRYSKLSDEDVLKRL 175 + + L I + + ++E L L Sbjct: 299 DILDSALLRPGRIDRKIEFPPPNEEARLDIL 329 >6CHS-H nrPDB Length = 819 Score = 50.1 bits (118), Expect = 1e-06, Method: Composition-based stats. Identities = 39/222 (17%), Positives = 69/222 (31%), Gaps = 40/222 (18%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLP 104 +++ G PG GKT +A+E L + + + + Sbjct: 257 VLLYGPPGTGKTLMARAVANE------TGAFFFLINGPEIMSKMAGESESNLRKAFEEAE 310 Query: 105 PGKHKIVILDEADSMTAGAQ-----------QALRRTME--LYSNSTRFAFACNQSNKII 151 I+ +DE DS+ + L M+ ++ A N+ N I Sbjct: 311 KNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSI- 369 Query: 152 EPLQSRCAILRYSKLSDEDVLKRLLQIIKLEDVKY-TNDGLEAIIFTAEGDMRQA--INN 208 +P R + D+ G I+ +M+ A ++ Sbjct: 370 DPALRRFGRFD-----------------REVDIGIPDPTGRLEILQIHTKNMKLADDVDL 412 Query: 209 LQSTVAGHGLVNADNVFKIVDSPHPLIVKKMLLASNLEDSIQ 250 Q HG V +D ++ I +KM L ED+I Sbjct: 413 EQIAAETHGYVGSDLAALCSEAAMQQIREKMDLIDLDEDTID 454 Score = 46.3 bits (108), Expect = 2e-05, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 50/166 (30%), Gaps = 34/166 (20%) Query: 27 KETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNA----SD 82 L+ ++ G PG GKT +A+E + EL + Sbjct: 515 DHPEKFLKFGLSPSR--GVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGES 572 Query: 83 DRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSM-------TAGAQQALRRTME--- 132 + I + F + + P +V LDE DS+ A A R + Sbjct: 573 ESNIRDI------FDKARAAAPC----VVFLDELDSIAKARGGSIGDAGGASDRVVNQLL 622 Query: 133 ------LYSNSTRFAFACNQSNKIIEPLQS--RCAILRYSKLSDED 170 + A N+ ++ L R L Y L DE Sbjct: 623 TEMDGMTSKKNVFVIGATNRPEQLDPALCRPGRLDQLIYVPLPDEA 668 >6MSD-E nrPDB Length = 403 Score = 50.1 bits (118), Expect = 1e-06, Method: Composition-based stats. Identities = 40/185 (21%), Positives = 72/185 (38%), Gaps = 34/185 (18%) Query: 46 IISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASD--DRGIDVVRNQIKH-FAQKKLH 102 ++ G PG GKT +A +L L++ +S D+ I I+ F + H Sbjct: 185 LLYGPPGTGKTLLARAVASQLDC-----NFLKVVSSSIVDKYIGESARLIREMFNYARDH 239 Query: 103 LPPGKHKIVILDEADSM--------TAGAQQALRRTMELYSN--------STRFAFACNQ 146 P I+ +DE D++ T+ ++ R MEL + + A N+ Sbjct: 240 QPC----IIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNR 295 Query: 147 SNKIIEPLQSRCAILR--YSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEG---- 200 + + L + R + L +E +L+I K+ EAI+ ++G Sbjct: 296 PDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGA 355 Query: 201 DMRQA 205 D+R Sbjct: 356 DLRNV 360 >6EF1-K nrPDB Length = 276 Score = 50.1 bits (118), Expect = 1e-06, Method: Composition-based stats. Identities = 42/239 (17%), Positives = 85/239 (35%), Gaps = 58/239 (24%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASD------DRGIDVVRNQIKHFAQ 98 +++ G PG GKT V +A S + +N S+ G +VR+ F Sbjct: 57 VLLYGPPGTGKTMLVKAVA-----NSTKAAFIRVNGSEFVHKYLGEGPRMVRDV---FRL 108 Query: 99 KKLHLPPGKHKIVILDEADSM--------TAGAQQALRRTMEL--------YSNSTRFAF 142 + + P I+ +DE DS+ T ++ R +EL S + + Sbjct: 109 ARENAPS----IIFIDEVDSIATKRFDAQTGSDREVQRILIELLTQMDGFDQSTNVKVIM 164 Query: 143 ACNQSNKIIEPLQSRCAI---LRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAE 199 A N+++ + L + + + L D +RL+ + + Sbjct: 165 ATNRADTLDPALLRPGRLDRKIEFPSLRDRR-ERRLIFGTIASKMSLAPEA--------- 214 Query: 200 GDMRQAINNLQSTVAGHGLVNADNVFKIVDSPHPLIVKK---MLLASNLEDSIQILRTD 255 +L S + + ++ + I+ V+K ++L S+LE++ Sbjct: 215 --------DLDSLIIRNDSLSGAVIAAIMQEAGLRAVRKNRYVILQSDLEEAYATQVKT 265 >3J3U-A nrPDB Length = 810 Score = 50.1 bits (118), Expect = 1e-06, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 104/307 (33%), Gaps = 38/307 (12%) Query: 6 SLQLPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHE 65 SL + L ++G + I R+ ++ + ++ G PG+GKT LA + Sbjct: 165 SLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQ 224 Query: 66 LLG-------RSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADS 118 ++ R L++ + G + + + I+ +D + Sbjct: 225 IINNEVPEILRDKRVMTLDM-GTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDALHT 283 Query: 119 MTA--------GAQQALRRTMELYSNSTRFAFACNQSNKIIE---PLQSRCAILRYSKLS 167 + A L+ ++ A ++ K IE L+ R ++ + S Sbjct: 284 LIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIQVDQPS 343 Query: 168 DEDVLKRLL----QIIKLEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAGHGLVNADN 223 ++ ++ L + V T+D +EA + L + Sbjct: 344 VDESIQILQGLRDRYEAHHRVSITDDAIEAAVK------------LSDRYISDRFLPDKA 391 Query: 224 VFKIVDSPHPLIVKKMLLASNLEDSIQILRTDLWKKGYSSIDIVTTSFRVTKNLAQVKES 283 + I ++ + ++ NL++ Q L +K + + + F +L ++ Sbjct: 392 IDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAA---VQSQEFEKAASLRDTEQR 448 Query: 284 VRLEMIK 290 +R ++ Sbjct: 449 LREQVED 455 Score = 37.0 bits (84), Expect = 0.010, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 33/105 (31%), Gaps = 11/105 (10%) Query: 39 DGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQI----- 93 + I G G+GKT LA + G + ++ ++ S+ + Sbjct: 535 KRPIGSFIFLGPTGVGKTELARALAESIFGDE--ESMIRIDMSEYMEKHSTSRLVGSPPG 592 Query: 94 ----KHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTMELY 134 Q + + +V+LD + L + +E Sbjct: 593 YVGYDEGGQLTEKVRRKPYSVVLLDAIEKAHPDVFNILLQVLEDG 637 >1LV7-A nrPDB Length = 257 Score = 50.1 bits (118), Expect = 1e-06, Method: Composition-based stats. Identities = 37/223 (16%), Positives = 68/223 (30%), Gaps = 53/223 (23%) Query: 18 QVLSDIVGNKETIDRLQQIAK-----------DGNMPH-MIISGMPGIGKTTSVHCLAHE 65 +D+ G E + + ++ + G +P +++ G PG GKT +A E Sbjct: 9 TTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGE 68 Query: 66 -------LLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADS 118 + G + + + + AS R F Q K P I+ +DE D+ Sbjct: 69 AKVPFFTISGSDFVEMFVGVGASRVR---------DMFEQAKKAAPC----IIFIDEIDA 115 Query: 119 MTAGAQQALR-------RTME---------LYSNSTRFAFACNQSNKIIEPLQS--RC-A 159 + L +T+ + A N+ + + L R Sbjct: 116 VGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDR 175 Query: 160 ILRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDM 202 + + L + + V D AII Sbjct: 176 QVVVGLPDVRGREQILK--VHMRRVPLAPDIDAAIIARGTPGF 216 >6EF0-L nrPDB Length = 273 Score = 49.4 bits (116), Expect = 2e-06, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 49/129 (37%), Gaps = 24/129 (18%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGR-SYADGVLELNASDDRGIDVVRNQIKHFAQKKLHL 103 +++ G PG GKT +A + ++ ++ ++R FA K H Sbjct: 55 VLLYGPPGTGKTLLAKAVAATIGANFIFSPASGIVDKYIGESARIIREM---FAYAKEHE 111 Query: 104 PPGKHKIVILDEADSM--------TAGAQQALRRTMELYS--------NSTRFAFACNQS 147 P I+ +DE D++ T+ ++ R MEL + T+ A N+ Sbjct: 112 PC----IIFMDEVDAIGGRRFSEGTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRP 167 Query: 148 NKIIEPLQS 156 + + L Sbjct: 168 DTLDPALLR 176 >6E11-1 nrPDB Length = 906 Score = 49.4 bits (116), Expect = 2e-06, Method: Composition-based stats. Identities = 48/254 (18%), Positives = 82/254 (32%), Gaps = 35/254 (13%) Query: 13 EKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSY- 71 EK R L I G E I + + N ++ G PG GKTT V L + + Sbjct: 199 EKVRNGKLQGIYGRDEEIRAIIESLLRYNKNSPVLVGNPGTGKTTIVEGLVYRIEKGDVP 258 Query: 72 ----ADGVLELN------ASDDRGIDVVR--NQIKHFAQKKLHLPPGKHKIVILDEADSM 119 V+ LN + RG R N IK KK + I+ +DE + Sbjct: 259 KELQGYTVISLNFRKFTSGTSYRGEFETRMKNIIKELKNKKNKI------ILFVDEIHLL 312 Query: 120 TA--------GAQQALRRTMELYSNSTRFAFACNQSNKIIE---PLQSRCAILRYSKLSD 168 A L+ + A + K IE + R + S Sbjct: 313 LGAGKAEGGTDAANLLKPVLSKGEIKLIGATTIAEYRKFIESCSAFERRFEKILVEPPSV 372 Query: 169 EDVLKRLLQIIKL----EDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAGHGLVNADNV 224 + +K L + + T+ L A ++ ++ ++ + + V Sbjct: 373 DMTVKILRSLKSKYENFYGINITDKALVAAAKISDRFIKDRYLPDKAIDLLNKACSFLQV 432 Query: 225 FKIVDSPHPLIVKK 238 ++ P + V + Sbjct: 433 -QLSGKPRIIDVTE 445 Score = 38.6 bits (88), Expect = 0.004, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 44/127 (34%), Gaps = 20/127 (15%) Query: 23 IVGNKETIDRLQQIA---------KDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYAD 73 I+GN++ I L + + + G G+GKT LA EL + D Sbjct: 603 IIGNEDIIKSLSDAVVKAATGMKDPEKPIGTFLFLGPTGVGKTELAKTLAIELF--NSKD 660 Query: 74 GVLELNASDDRGIDVVRN---------QIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQ 124 ++ +N S+ V Q + H +V+ DE + A Sbjct: 661 NLIRVNMSEFTEAHSVSKITGSPPGYVGFSDSGQLTEAVREKPHSVVLFDELEKAHADVF 720 Query: 125 QALRRTM 131 + L + + Sbjct: 721 KVLLQIL 727 >4L16-A nrPDB Length = 334 Score = 49.0 bits (115), Expect = 3e-06, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 74/210 (35%), Gaps = 33/210 (15%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNAS-DDRGIDVVRNQIKHFAQKKLHL 103 +++ G PG GKT C+A + + L + G +VR F+ +L L Sbjct: 92 VLLFGPPGTGKTMIGRCVASQCKATFFNISASSLTSKWVGEGEKLVRAL---FSVARLKL 148 Query: 104 PPGKHKIVILDEADSMTAGAQQA---------------LRRTMELYSNSTRFAFACNQSN 148 P ++ +DE DS+ + ++ L A N+ Sbjct: 149 PS----VIFIDEIDSLLSSRSESEHESSRRIKTEFLVQLDGVNTAPDERLLVLGATNRPQ 204 Query: 149 KIIEPLQSRCAILRYSKLS-DEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEG----DMR 203 ++ E + R Y L E + + ++ TN LE I +G DMR Sbjct: 205 ELDEAARRRFQKRLYIALPEPESRTQIVQNLLVGTRHDITNHNLERIRELTDGYSGADMR 264 Query: 204 Q-----AINNLQSTVAGHGLVNADNVFKIV 228 Q A+ ++ ++ D++ + Sbjct: 265 QLCTEAAMGPIRDIGDDIETIDKDDIRAVT 294 >6EM8-A nrPDB Length = 818 Score = 49.0 bits (115), Expect = 3e-06, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 74/202 (36%), Gaps = 21/202 (10%) Query: 19 VLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADG---- 74 L ++G + I R+ ++ + ++ G PG+GKT LA ++ + Sbjct: 178 TLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDK 237 Query: 75 -VLELN-ASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTA--------GAQ 124 V+ L+ + G + + + + I+ +DE ++ A Sbjct: 238 RVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGNVILFIDELHTLVGAGGAEGAIDAS 297 Query: 125 QALRRTMELYSNSTRFAFACNQSNKIIE---PLQSRCAILRYSKLSDED---VLKRLLQI 178 L+ + A ++ K IE L+ R ++ + S D +LK L Sbjct: 298 NILKPALARGELQCIGATTLDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDR 357 Query: 179 IK-LEDVKYTNDGLEAIIFTAE 199 + + +++ +EA + + Sbjct: 358 YEAHHRINISDEAIEAAVKLSN 379 Score = 42.8 bits (99), Expect = 2e-04, Method: Composition-based stats. Identities = 18/130 (13%), Positives = 44/130 (33%), Gaps = 20/130 (15%) Query: 23 IVGNKETIDRLQQIAKDGN---------MPHMIISGMPGIGKTTSVHCLAHELLGRSYAD 73 ++G K+ ++ + + + + I G G+GKT LA + G D Sbjct: 510 VIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDD--D 567 Query: 74 GVLELNASDDRGIDVVRNQI---------KHFAQKKLHLPPGKHKIVILDEADSMTAGAQ 124 ++ ++ S+ V + Q + + +++ DE + Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627 Query: 125 QALRRTMELY 134 L + ++ Sbjct: 628 NILLQVLDDG 637 >5WVI-K nrPDB Length = 428 Score = 49.0 bits (115), Expect = 3e-06, Method: Composition-based stats. Identities = 42/239 (17%), Positives = 85/239 (35%), Gaps = 58/239 (24%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASD------DRGIDVVRNQIKHFAQ 98 +++ G PG GKT V +A S + +N S+ G +VR+ F Sbjct: 209 VLLYGPPGTGKTMLVKAVA-----NSTKAAFIRVNGSEFVHKYLGEGPRMVRDV---FRL 260 Query: 99 KKLHLPPGKHKIVILDEADSM--------TAGAQQALRRTMEL--------YSNSTRFAF 142 + + P I+ +DE DS+ T ++ R +EL S + + Sbjct: 261 ARENAPS----IIFIDEVDSIATKRFDAQTGSDREVQRILIELLTQMDGFDQSTNVKVIM 316 Query: 143 ACNQSNKIIEPLQSRCAI---LRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAE 199 A N+++ + L + + + L D +RL+ + + Sbjct: 317 ATNRADTLDPALLRPGRLDRKIEFPSLRDRR-ERRLIFGTIASKMSLAPEA--------- 366 Query: 200 GDMRQAINNLQSTVAGHGLVNADNVFKIVDSPHPLIVKK---MLLASNLEDSIQILRTD 255 +L S + + ++ + I+ V+K ++L S+LE++ Sbjct: 367 --------DLDSLIIRNDSLSGAVIAAIMQEAGLRAVRKNRYVILQSDLEEAYATQVKT 417 >5UBV-A nrPDB Length = 246 Score = 48.2 bits (113), Expect = 4e-06, Method: Composition-based stats. Identities = 44/210 (20%), Positives = 75/210 (35%), Gaps = 37/210 (17%) Query: 20 LSDIVGNKETIDRLQQIAK-----------DGNMPH-MIISGMPGIGKTTSVHCLAHELL 67 SD+ G E + LQ++ + G +P +++ G PG GKT +A E Sbjct: 5 FSDVHGCDEAKEELQELVEFLRNPEKFSNLGGKLPKGVLLVGPPGTGKTLLARAVAGEAG 64 Query: 68 GRSYADGVLELNASDDR-GIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSM------- 119 + E + G VR + A+ K IV +DE D++ Sbjct: 65 VPFFYMSGSEFDEIYVGVGAKRVRELF-NAAKAKAP------SIVFIDELDAIGGRRNSR 117 Query: 120 ----TAGAQQALRRTMELYSNS--TRFAFACNQSNKIIEPLQSRCAILRYSKLSDEDVLK 173 L M+ ++ + A N + + L R+ +S DV Sbjct: 118 DATYVRQTLNQLLTEMDGFAQNSGVIILGATNFPESLDKALTRPGRFDRHVHVSLPDVRG 177 Query: 174 RLLQIIKL--EDVKYTNDG-LEAIIFTAEG 200 R+ I+K + +K +D + AI G Sbjct: 178 RIA-ILKHHAKKIKIGSDVNIAAIAARTSG 206 >1XWI-A nrPDB Length = 322 Score = 48.2 bits (113), Expect = 5e-06, Method: Composition-based stats. Identities = 30/150 (20%), Positives = 55/150 (36%), Gaps = 26/150 (17%) Query: 16 RPQV-LSDIVGNKETIDRLQQIA-KDGNMPHM-----------IISGMPGIGKTTSVHCL 62 RP V SD+ G + + L++ PH+ ++ G PG GK+ + Sbjct: 6 RPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV 65 Query: 63 AHELLGRSYADGVLELNASD--DRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSM- 119 A E + +++SD + + +K+ Q P I+ +DE DS+ Sbjct: 66 ATE----ANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPS---IIFIDEIDSLC 118 Query: 120 ---TAGAQQALRRTMELYSNSTRFAFACNQ 146 + +A RR + + N Sbjct: 119 GSRSENESEAARRIKTEFLVQMQGVGVDND 148 >4ZPX-A nrPDB Length = 413 Score = 47.8 bits (112), Expect = 6e-06, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 32/66 (48%), Gaps = 2/66 (3%) Query: 18 QVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLE 77 +++ ++G + ++ ++ A H+++ G PG GK+ +A L + D ++ Sbjct: 38 KLIDQVIGQEHAVEVIKTAANQKR--HVLLIGEPGTGKSMLGQAMAELLPTETLEDILVF 95 Query: 78 LNASDD 83 N D+ Sbjct: 96 PNPEDE 101 >3PXI-A nrPDB Length = 758 Score = 47.8 bits (112), Expect = 6e-06, Method: Composition-based stats. Identities = 44/293 (15%), Positives = 103/293 (35%), Gaps = 27/293 (9%) Query: 6 SLQLPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHE 65 SL + L ++G + I R+ ++ + ++ G PG+GKT LA + Sbjct: 165 SLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQ 224 Query: 66 LLGRSYADGVLE-LNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQ 124 ++ + + + + D G + + + I+ +D A A Sbjct: 225 IINNEVPEILRDKRVMTLDMGTKYRGEFEDRLKKVMDEIRQAGNIILFIDAA----IDAS 280 Query: 125 QALRRTMELYSNSTRFAFACNQSNKIIE---PLQSRCAILRYSKLSDEDVLKRLL----Q 177 L+ ++ A ++ K IE L+ R ++ + S ++ ++ L + Sbjct: 281 NILKPSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIQVDQPSVDESIQILQGLRDR 340 Query: 178 IIKLEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAGHGLVNADNVFKIVDSPHPLIVK 237 V T+D +EA + L + + I ++ + ++ Sbjct: 341 YEAHHRVSITDDAIEAAVK------------LSDRYISDRFLPDKAIDLIDEAGSKVRLR 388 Query: 238 KMLLASNLEDSIQILRTDLWKKGYSSIDIVTTSFRVTKNLAQVKESVRLEMIK 290 NL++ Q L +K + + + F +L ++ +R ++ Sbjct: 389 SFTTPPNLKELEQKLDEVRKEKDAA---VQSQEFEKAASLRDTEQRLREQVED 438 Score = 37.8 bits (86), Expect = 0.006, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 32/96 (33%), Gaps = 7/96 (7%) Query: 39 DGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQ 98 + I G G+GKT LA + G + ++ ++ S+ Q Sbjct: 518 KRPIGSFIFLGPTGVGKTELARALAESIFGDE--ESMIRIDMSEYMEKHSTSGG-----Q 570 Query: 99 KKLHLPPGKHKIVILDEADSMTAGAQQALRRTMELY 134 + + +V+LD + L + +E Sbjct: 571 LTEKVRRKPYSVVLLDAIEKAHPDVFNILLQVLEDG 606 >6AZ0-A nrPDB Length = 439 Score = 47.8 bits (112), Expect = 7e-06, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 79/246 (32%), Gaps = 44/246 (17%) Query: 20 LSDIVGNKETIDRLQQIAK-----------DGNMPH-MIISGMPGIGKTTSVHCLAHELL 67 D+ G E L++I G +P ++++G PG GKT A E Sbjct: 2 FDDVCGCDEARAELEEIVDFLKDPTKYESLGGKLPKGVLLTGPPGTGKTLLARATAGEAG 61 Query: 68 GRSYADGVLELNASDDR-GIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTA----G 122 + E + G +R+ FAQ + P I+ +D+ D++ Sbjct: 62 VDFFFMSGSEFDEVYVGVGAKRIRDL---FAQARSRAPA----IIFIDQLDAIGGKRNPK 114 Query: 123 AQQALRRTMEL---------YSNSTRFAFACNQSNKIIEPLQSRCAILRYSKLSDEDVLK 173 Q ++T+ ++ A N + + L + + DV Sbjct: 115 DQAYAKQTLNQLLVELDGFSQTSGIIIIGATNFPEALDKALTRPGRFDKVVNVDLPDVRG 174 Query: 174 RLLQIIKL--EDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAGHGLVNADNVFKIVDSP 231 R I+K + + ++ II + S LVN V+ + Sbjct: 175 R-ADILKHHMKKITLADNVDPTIIARGTPGL--------SGAELANLVNQAAVYACQKNA 225 Query: 232 HPLIVK 237 + + Sbjct: 226 VSVDMS 231 >3PXG-A nrPDB Length = 468 Score = 47.8 bits (112), Expect = 7e-06, Method: Composition-based stats. Identities = 44/293 (15%), Positives = 103/293 (35%), Gaps = 27/293 (9%) Query: 6 SLQLPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHE 65 SL + L ++G + I R+ ++ + ++ G PG+GKT LA + Sbjct: 165 SLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQ 224 Query: 66 LLGRSYADGVLE-LNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQ 124 ++ + + + + D G + + + I+ +D A A Sbjct: 225 IINNEVPEILRDKRVMTLDMGTKYRGEFEDRLKKVMDEIRQAGNIILFIDAA----IDAS 280 Query: 125 QALRRTMELYSNSTRFAFACNQSNKIIE---PLQSRCAILRYSKLSDEDVLKRLL----Q 177 L+ ++ A ++ K IE L+ R ++ + S ++ ++ L + Sbjct: 281 NILKPSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIQVDQPSVDESIQILQGLRDR 340 Query: 178 IIKLEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAGHGLVNADNVFKIVDSPHPLIVK 237 V T+D +EA + L + + I ++ + ++ Sbjct: 341 YEAHHRVSITDDAIEAAVK------------LSDRYISDRFLPDKAIDLIDEAGSKVRLR 388 Query: 238 KMLLASNLEDSIQILRTDLWKKGYSSIDIVTTSFRVTKNLAQVKESVRLEMIK 290 NL++ Q L +K + + + F +L ++ +R ++ Sbjct: 389 SFTTPPNLKELEQKLDEVRKEKDAA---VQSQEFEKAASLRDTEQRLREQVED 438 >6FVU-L nrPDB Length = 388 Score = 47.4 bits (111), Expect = 7e-06, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 49/129 (37%), Gaps = 24/129 (18%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGR-SYADGVLELNASDDRGIDVVRNQIKHFAQKKLHL 103 +++ G PG GKT +A + ++ ++ ++R FA K H Sbjct: 170 VLLYGPPGTGKTLLAKAVAATIGANFIFSPASGIVDKYIGESARIIREM---FAYAKEHE 226 Query: 104 PPGKHKIVILDEADSM--------TAGAQQALRRTMELYS--------NSTRFAFACNQS 147 P I+ +DE D++ T+ ++ R MEL + T+ A N+ Sbjct: 227 PC----IIFMDEVDAIGGRRFSEGTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRP 282 Query: 148 NKIIEPLQS 156 + + L Sbjct: 283 DTLDPALLR 291 >5WVI-L nrPDB Length = 437 Score = 47.4 bits (111), Expect = 8e-06, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 49/129 (37%), Gaps = 24/129 (18%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGR-SYADGVLELNASDDRGIDVVRNQIKHFAQKKLHL 103 +++ G PG GKT +A + ++ ++ ++R FA K H Sbjct: 218 VLLYGPPGTGKTLLAKAVAATIGANFIFSPASGIVDKYIGESARIIREM---FAYAKEHE 274 Query: 104 PPGKHKIVILDEADSM--------TAGAQQALRRTMELYS--------NSTRFAFACNQS 147 P I+ +DE D++ T+ ++ R MEL + T+ A N+ Sbjct: 275 PC----IIFMDEVDAIGGRRFSEGTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRP 330 Query: 148 NKIIEPLQS 156 + + L Sbjct: 331 DTLDPALLR 339 >2ZAO-A nrPDB Length = 444 Score = 47.4 bits (111), Expect = 8e-06, Method: Composition-based stats. Identities = 30/150 (20%), Positives = 55/150 (36%), Gaps = 26/150 (17%) Query: 16 RPQV-LSDIVGNKETIDRLQQIA-KDGNMPHM-----------IISGMPGIGKTTSVHCL 62 RP V SD+ G + + L++ PH+ ++ G PG GK+ + Sbjct: 128 RPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV 187 Query: 63 AHELLGRSYADGVLELNASD--DRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSM- 119 A E + +++SD + + +K+ Q P I+ +DE DS+ Sbjct: 188 ATE----ANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPS---IIFIDEIDSLC 240 Query: 120 ---TAGAQQALRRTMELYSNSTRFAFACNQ 146 + +A RR + + N Sbjct: 241 GSRSENESEAARRIKTEFLVQMQGVGVDND 270 >3K1J-A nrPDB Length = 604 Score = 47.1 bits (110), Expect = 9e-06, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 32/66 (48%), Gaps = 2/66 (3%) Query: 18 QVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLE 77 +++ ++G + ++ ++ A H+++ G PG GK+ +A L + D ++ Sbjct: 38 KLIDQVIGQEHAVEVIKTAANQKR--HVLLIGEPGTGKSMLGQAMAELLPTETLEDILVF 95 Query: 78 LNASDD 83 N D+ Sbjct: 96 PNPEDE 101 >4YPL-A nrPDB Length = 555 Score = 47.1 bits (110), Expect = 1e-05, Method: Composition-based stats. Identities = 38/242 (15%), Positives = 85/242 (35%), Gaps = 59/242 (24%) Query: 8 QLPWVEKYRPQVLS----------DIVGNKETIDRLQQIAKDGNM----------PHMII 47 ++PW K P+VL D G K+ +R+ + + P +++ Sbjct: 57 EVPWS-KADPEVLDINHTRQVLDEDHYGLKDVKERILEYLAVRQLTQGLDVRNKAPILVL 115 Query: 48 SGMPGIGKTTSVHCLAHELLGRSYADGV------LELNASDDRGIDVVRNQIKHFAQKKL 101 G PG+GKT+ +A + + + + E+ I + ++ H ++ Sbjct: 116 VGPPGVGKTSLGRSIARSMNRKFHRISLGGVRDEAEIRGHRRTYIGAMPGKLIHAMKQVG 175 Query: 102 HLPPGKHKIVILDEADSMT----AGAQQALRRTMELYSNST---------------RFAF 142 + P +++LD+ D M+ A+ ++ N+T F Sbjct: 176 VINP----VILLDQIDKMSSDWRGDPASAMLEVLDPEQNNTFTDHYLDVPYDLSKVFFIT 231 Query: 143 ACNQSNKIIEPLQSRCAILRYSKLSDEDVL---------KRLLQIIKLEDVKYTNDGLEA 193 N I PL R ++ ++ + K++ + ++ T+ + Sbjct: 232 TANTLQTIPRPLLDRMEVIEIPGYTNMEKQAIARQYLWPKQVRESGMEGRIEVTDAAILR 291 Query: 194 II 195 +I Sbjct: 292 VI 293 >2R65-A nrPDB Length = 268 Score = 47.1 bits (110), Expect = 1e-05, Method: Composition-based stats. Identities = 50/256 (19%), Positives = 87/256 (33%), Gaps = 58/256 (22%) Query: 20 LSDIVGNKETIDRLQQIAKDGNMPH------------MIISGMPGIGKTTSVHCLAHE-- 65 D+ GN+E + + +I P +++ G PG GKT +A E Sbjct: 10 FKDMAGNEEAKEEVVEIVDFLKYPERYANLGAKIPKGVLLVGPPGTGKTLLAKAVAGEAH 69 Query: 66 -----LLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMT 120 + G S+ + + L AS R + F K P I+ +DE D++ Sbjct: 70 VPFFSMGGSSFIEMFVGLGASRVRDL---------FETAKKQAPS----IIFIDEIDAIG 116 Query: 121 AGAQQA---------------LRRTME-LYSNSTRFA-FACNQSNKIIEPLQSRCAILRY 163 L M+ S + A +I++P R Sbjct: 117 KSRAAGGVVSGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALMRPGRFDR 176 Query: 164 SKLSDEDVLKRLLQIIK--LEDVKYTNDG-LEAIIFTAEG----DMRQAINN--LQSTVA 214 L D+ ++I+K ++ VK ND L+ + G D+ IN L + Sbjct: 177 QVLVDKPDFNGRVEILKVHIKGVKLANDVNLQEVAKLTAGLAGADLANIINEAALLAGRN 236 Query: 215 GHGLVNADNVFKIVDS 230 V ++ + V+ Sbjct: 237 NQKEVRQQHLKEAVER 252 >6HE4-H nrPDB Length = 267 Score = 47.1 bits (110), Expect = 1e-05, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 62/179 (34%), Gaps = 34/179 (18%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQK-KLHL 103 +++ G PG GKT +A + + S + V+ I A+ + Sbjct: 56 VLLYGPPGTGKTLLAKAVA-----NQTRATFIRVVGS-----EFVQKYIGEGARLVREVF 105 Query: 104 PPGKHK---IVILDEADSM--------TAGAQQALRRTMEL--------YSNSTRFAFAC 144 K K I+ +DE D++ T+G ++ R M+L + A Sbjct: 106 QLAKEKAPSIIFIDELDAIAARRTNSDTSGDREVQRTMMQLLAELDGFDPRGDVKVIGAT 165 Query: 145 NQSNKIIEPLQS--RCAILRYSKLSDEDVLKRLLQIIKLEDVKYTNDG-LEAIIFTAEG 200 N+ + + + R + L + ++ +I +K D + + EG Sbjct: 166 NRIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFKIHTR-KMKLAEDVDFKELARITEG 223 >5W0T-A nrPDB Length = 304 Score = 47.1 bits (110), Expect = 1e-05, Method: Composition-based stats. Identities = 34/171 (19%), Positives = 60/171 (35%), Gaps = 22/171 (12%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLP 104 +++ G PG GKT LA E G ++ + +++ D+ + L Sbjct: 80 VLLYGPPGCGKTMLAKALAKE-SGANFI--SIRMSSIMDKWYGESNKIVDAMFSLANKLQ 136 Query: 105 PGKHKIVILDEADSMTAGAQQA---LRRTMELY----------SNSTRFAFACNQSNKII 151 P I+ +DE DS + T++ + A N+ N I Sbjct: 137 PC---IIFIDEIDSFLRERSSTDHEVTATLKAEFMTLWDGLLNNGRVMIIGATNRINDID 193 Query: 152 EPLQSRCAILRYSKLSDEDVLKRLLQIIKLEDVKYTNDG--LEAIIFTAEG 200 + R L D ++L ++ L+D K D L+ I +G Sbjct: 194 DAFLRRLPKRFLVSLPGSDQRYKILSVL-LKDTKLDEDEFDLQLIADNTKG 243 >6D00-1 nrPDB Length = 883 Score = 46.7 bits (109), Expect = 1e-05, Method: Composition-based stats. Identities = 30/177 (16%), Positives = 62/177 (35%), Gaps = 15/177 (8%) Query: 20 LSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELN 79 L ++G E I R+ ++ + + G PG+GKT LA+ ++ + + Sbjct: 177 LDPVIGRDEIISRVIRVLSRRTKNNPCLVGEPGVGKTAIAEGLANRIVKGDIPSSLQKKV 236 Query: 80 ASDDRGIDV----VRNQIKHFAQKKLHLPPGKHKIVILDEADSMTA--------GAQQAL 127 S D G + R + + + L IV +DE ++ A L Sbjct: 237 YSLDIGSLLAGAKYRGEFEERLKAVLKELKEAQAIVFIDEIHTVLGAGKSEGAIDAANLL 296 Query: 128 RRTMELYSNSTRFAFACNQSNKIIE---PLQSRCAILRYSKLSDEDVLKRLLQIIKL 181 + + A + + +E + R ++ + S D + L + + Sbjct: 297 KPMLARGELRCIGATTLTEYRQYVEKDPAFERRFQLVMVEEPSVTDTISILRGLKER 353 Score = 32.8 bits (73), Expect = 0.20, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 43/132 (32%), Gaps = 20/132 (15%) Query: 21 SDIVGNKETIDRL-------QQIAKDGNMP--HMIISGMPGIGKTTSVHCLAHELLGRSY 71 +VG E I + + ++ N P + G G GKT V LA L + Sbjct: 570 QHVVGQDEAIKAICDAIRLSRTGLQNRNRPLASFLFLGPTGCGKTLCVKELAAFLF--ND 627 Query: 72 ADGVLELNASDDRGIDVVRNQI---------KHFAQKKLHLPPGKHKIVILDEADSMTAG 122 ++ ++ S+ V + Q + + +V+ DE + Sbjct: 628 PGAIVRIDMSEYMEKHAVSRLVGAPPGYIGHDEGGQLTEAVRRRPYTVVLFDEMEKAHKD 687 Query: 123 AQQALRRTMELY 134 L + ++ Sbjct: 688 VSNLLLQILDDG 699 >6HE9-H nrPDB Length = 390 Score = 46.7 bits (109), Expect = 1e-05, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 62/179 (34%), Gaps = 34/179 (18%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQK-KLHL 103 +++ G PG GKT +A + + S + V+ I A+ + Sbjct: 170 VLLYGPPGTGKTLLAKAVA-----NQTRATFIRVVGS-----EFVQKYIGEGARLVREVF 219 Query: 104 PPGKHK---IVILDEADSM--------TAGAQQALRRTMEL--------YSNSTRFAFAC 144 K K I+ +DE D++ T+G ++ R M+L + A Sbjct: 220 QLAKEKAPSIIFIDELDAIAARRTNSDTSGDREVQRTMMQLLAELDGFDPRGDVKVIGAT 279 Query: 145 NQSNKIIEPLQS--RCAILRYSKLSDEDVLKRLLQIIKLEDVKYTNDG-LEAIIFTAEG 200 N+ + + + R + L + ++ +I +K D + + EG Sbjct: 280 NRIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFKIHTR-KMKLAEDVDFKELARITEG 337 >5VHN-D nrPDB Length = 262 Score = 46.3 bits (108), Expect = 2e-05, Method: Composition-based stats. Identities = 38/236 (16%), Positives = 83/236 (35%), Gaps = 59/236 (25%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASD------DRGIDVVRNQIKHFAQ 98 +++ G PG GKT +AH + + S+ G +VR+ F Sbjct: 58 VLMYGPPGCGKTMLAKAVAH-----HTTAAFIRVVGSEFVQKYLGEGPRMVRDV---FRL 109 Query: 99 KKLHLPPGKHKIVILDEADSM--------TAGAQQALRRTMELYSN--------STRFAF 142 K + P I+ +DE D++ T ++ R +EL + + + Sbjct: 110 AKENAPA----IIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIM 165 Query: 143 ACNQSNKIIEPLQSRCAI---LRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAE 199 A N+++ + L + + + KRL+ + + + Sbjct: 166 ATNRADTLDPALLRPGRLDRKIEFPLPDRRQ--KRLIFSTITSKMNLSEEV--------- 214 Query: 200 GDMRQAINNLQSTVAGHGLVNADNVFKIVDSPHPLIVKK---MLLASNLEDSIQIL 252 +L+ VA ++ ++ I L V++ ++LA + E + + + Sbjct: 215 --------DLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTV 262 >5C18-A nrPDB Length = 785 Score = 45.9 bits (107), Expect = 2e-05, Method: Composition-based stats. Identities = 43/211 (20%), Positives = 82/211 (38%), Gaps = 23/211 (10%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLP 104 +++ G PG GKT +A+E + E+ + + N K F + + + P Sbjct: 240 ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESE--SNLRKAFEEAEKNAP 297 Query: 105 PGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSRCAILRY- 163 I+ +DE D++ A + + E+ +++ L+ R ++ Sbjct: 298 A----IIFIDELDAI---APKREKTHGEVERRIVSQLLT------LMDGLKQRAHVIVMA 344 Query: 164 ---SKLSDEDVLKRLLQIIKLEDVKYTN-DGLEAIIFTAEGDMRQA--INNLQSTVAGHG 217 S + L+R + + D+ + G I+ +M+ A ++ Q HG Sbjct: 345 ATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHG 404 Query: 218 LVNADNVFKIVDSPHPLIVKKMLLASNLEDS 248 V AD ++ I KKM L +LED Sbjct: 405 HVGADLAALCSEAALQAIRKKMDLI-DLEDE 434 Score = 43.6 bits (101), Expect = 1e-04, Method: Composition-based stats. Identities = 31/196 (15%), Positives = 57/196 (29%), Gaps = 34/196 (17%) Query: 27 KETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELN----ASD 82 + L+ ++ G PG GKT +A+E + EL Sbjct: 497 EHPDKFLKFGMTPSK--GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGES 554 Query: 83 DRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAG-------AQQALRRTMEL-- 133 + + + ++ + A ++ DE DS+ A R + Sbjct: 555 EANVREIFDKARQAAPC----------VLFFDELDSIAKARGGNIGDGGGAADRVINQIL 604 Query: 134 -------YSNSTRFAFACNQSNKIIEPLQS--RCAILRYSKLSDEDVLKRLLQIIKLEDV 184 + A N+ + I + R L Y L DE +L+ + Sbjct: 605 TEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSP 664 Query: 185 KYTNDGLEAIIFTAEG 200 + LE + G Sbjct: 665 VAKDVDLEFLAKMTNG 680 >6ED3-A nrPDB Length = 848 Score = 45.9 bits (107), Expect = 2e-05, Method: Composition-based stats. Identities = 52/326 (15%), Positives = 117/326 (35%), Gaps = 37/326 (11%) Query: 7 LQLPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHEL 66 + R L ++G I R+ Q+ + ++ G PG+GKT V LA + Sbjct: 164 YSTDLTARAREGKLDPVIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRI 223 Query: 67 LGRSYADGVLE-----------LNASDDRG-----IDVVRNQIKHFAQKKLHLPPGKHKI 110 + + + + + S RG + V + IK+ A + + H I Sbjct: 224 VAGDVPESLRDKTIVALDLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTI 283 Query: 111 VILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIE---PLQSRCAILRYSKLS 167 V A ++ + A ++ K IE L+ R + + S Sbjct: 284 VGAGATGEGAMDAGNMIKPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPS 343 Query: 168 DEDVLKRLL----QIIKLEDVKYTNDGLEAIIFTAEG--DMR----QAINN-LQSTVAGH 216 ED + L + V+ T+ L A ++ R +AI+ ++ Sbjct: 344 VEDTIGILRGLKDRYEVHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLR 403 Query: 217 GLVNAD--NVFKIVDSPHPLIVKKMLLASNLEDS----IQILRTDLWKKGYSSIDIVTTS 270 +++ + ++ L +++M L+ +++ + LR++L + ++ T Sbjct: 404 MEIDSRPVEIDEVERLVRRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRW 463 Query: 271 FRVTKNLAQVKESVRLEMIKEIGLTH 296 + V++ ++ ++ G + Sbjct: 464 QNEKNAIEIVRD-LKEQLEALRGESE 488 Score = 37.8 bits (86), Expect = 0.007, Method: Composition-based stats. Identities = 29/204 (14%), Positives = 59/204 (28%), Gaps = 37/204 (18%) Query: 23 IVGNKETIDRL-------QQIAKDGNMP--HMIISGMPGIGKTTSVHCLAHELLGRSYAD 73 ++G K + + + D N P + G G+GKT LA L A Sbjct: 572 VIGQKAAVTAVSDAVRRSRAGVSDPNRPTGAFMFLGPTGVGKTELAKALADFLFDDERA- 630 Query: 74 GVLELNASDDRGIDVVRNQI---------KHFAQKKLHLPPGKHKIVILDEADSMTAGAQ 124 ++ ++ S+ V I + Q + + +V+ DE + Sbjct: 631 -MVRIDMSEYGEKHTVARLIGAPPGYVGYEAGGQLTEAVRRRPYTVVLFDEIEKAHPDVF 689 Query: 125 QALRRTMELYS-----------NSTRFAFACNQSNKIIEPLQSRCAILRYSKLSDEDVLK 173 L + ++ +T N + + + + Sbjct: 690 DVLLQVLDEGRLTDGHGRTVDFRNTILILTSNLGSGGSAEQVLAAVRATFKP----EFIN 745 Query: 174 RLLQIIKLEDVKYTNDGLEAIIFT 197 RL ++ E + L I+ Sbjct: 746 RLDDVLIFEG--LNPEELVRIVDI 767 >6MCK-A nrPDB Length = 606 Score = 45.9 bits (107), Expect = 3e-05, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 75/211 (35%), Gaps = 23/211 (10%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLP 104 +++ G PG GKT +A+E L + + + + Sbjct: 33 ILLYGPPGTGKTLIARAVANE------TGAFFFLINGPEIMSKLAGESESNLRKAFEEAE 86 Query: 105 PGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSRCAILRY- 163 I+ +DE D++ A + + E+ +++ L+ R ++ Sbjct: 87 KNAPAIIFIDELDAI---APKREKTHGEVERRIVSQLLT------LMDGLKQRAHVIVMA 137 Query: 164 ---SKLSDEDVLKRLLQIIKLEDVKYTN-DGLEAIIFTAEGDMRQA--INNLQSTVAGHG 217 S + L+R + + D+ + G I+ +M+ A ++ Q HG Sbjct: 138 ATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHG 197 Query: 218 LVNADNVFKIVDSPHPLIVKKMLLASNLEDS 248 V AD ++ I KKM L +LED Sbjct: 198 HVGADLAALCSEAALQAIRKKMDLI-DLEDE 227 Score = 43.6 bits (101), Expect = 1e-04, Method: Composition-based stats. Identities = 31/196 (15%), Positives = 57/196 (29%), Gaps = 34/196 (17%) Query: 27 KETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELN----ASD 82 + L+ ++ G PG GKT +A+E + EL Sbjct: 290 EHPDKFLKFGMTPSK--GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGES 347 Query: 83 DRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAG-------AQQALRRTMEL-- 133 + + + ++ + A ++ DE DS+ A R + Sbjct: 348 EANVREIFDKARQAAPC----------VLFFDELDSIAKARGGNIGDGGGAADRVINQIL 397 Query: 134 -------YSNSTRFAFACNQSNKIIEPLQS--RCAILRYSKLSDEDVLKRLLQIIKLEDV 184 + A N+ + I + R L Y L DE +L+ + Sbjct: 398 TEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSP 457 Query: 185 KYTNDGLEAIIFTAEG 200 + LE + G Sbjct: 458 VAKDVDLEFLAKMTNG 473 >3HU1-A nrPDB Length = 489 Score = 45.5 bits (106), Expect = 3e-05, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 75/211 (35%), Gaps = 23/211 (10%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLP 104 +++ G PG GKT +A+E L + + + + Sbjct: 241 ILLYGPPGTGKTLIARAVANE------TGAFFFLINGPEIMSKLAGESESNLRKAFEEAE 294 Query: 105 PGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSRCAILRY- 163 I+ +DE D++ A + + E+ +++ L+ R ++ Sbjct: 295 KNAPAIIFIDELDAI---APKREKTHGEVERRIVSQLLT------LMDGLKQRAHVIVMA 345 Query: 164 ---SKLSDEDVLKRLLQIIKLEDVKYTN-DGLEAIIFTAEGDMRQA--INNLQSTVAGHG 217 S + L+R + + D+ + G I+ +M+ A ++ Q HG Sbjct: 346 ATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHG 405 Query: 218 LVNADNVFKIVDSPHPLIVKKMLLASNLEDS 248 V AD ++ I KKM L +LED Sbjct: 406 HVGADLAALCSEAALQAIRKKMDLI-DLEDE 435 >6EF0-H nrPDB Length = 257 Score = 45.5 bits (106), Expect = 3e-05, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 50/150 (33%), Gaps = 37/150 (24%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDD------RGIDVVRNQIKHFAQ 98 +++ G PG GKT +A+ + + S+ G +VR + Sbjct: 46 ILLYGPPGTGKTLCARAVAN-----RTDATFIRVIGSELVQKYVGEGARMVRELFEMART 100 Query: 99 KKLHLPPGKHKIVILDEADSMTA-------GAQQALRRTMEL---------YSNSTRFAF 142 KK I+ DE D++ G ++RTM + + F Sbjct: 101 KKAC-------IIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMF 153 Query: 143 ACNQSNKIIEPLQSRCAI---LRYSKLSDE 169 A N+ N + L I + +S E Sbjct: 154 ATNRPNTLDPALLRPGRIDRKVEFSLPDLE 183 >4YPN-A nrPDB Length = 293 Score = 45.5 bits (106), Expect = 3e-05, Method: Composition-based stats. Identities = 36/202 (17%), Positives = 71/202 (35%), Gaps = 50/202 (24%) Query: 8 QLPWVEKYRPQVLS----------DIVGNKETIDRLQQIAKDGNM----------PHMII 47 ++PW K P+VL D G K+ +R+ + + P +++ Sbjct: 90 EVPWS-KADPEVLDINHTRQVLDEDHYGLKDVKERILEYLAVRQLTQGLDVRNKAPILVL 148 Query: 48 SGMPGIGKTTSVHCLAHELLGRSYADGV------LELNASDDRGIDVVRNQIKHFAQKKL 101 G PG+GKT+ +A + + + + E+ I + ++ H ++ Sbjct: 149 VGPPGVGKTSLGRSIARSMNRKFHRISLGGVRDEAEIRGHRRTYIGAMPGKLIHAMKQVG 208 Query: 102 HLPPGKHKIVILDEADSMT----AGAQQALRRTMELYSNST---------------RFAF 142 + P +++LDE D M+ A+ ++ N+T F Sbjct: 209 VINP----VILLDEIDKMSSDWRGDPASAMLEVLDPEQNNTFTDHYLDVPYDLSKVFFIT 264 Query: 143 ACNQSNKIIEPLQSRCAILRYS 164 N I PL R ++ Sbjct: 265 TANTLQTIPRPLLDRMEVIEIP 286 >6QI9-D nrPDB Length = 463 Score = 45.1 bits (105), Expect = 4e-05, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 57/158 (36%), Gaps = 21/158 (13%) Query: 74 GVLELNASDDRGID-VVRNQIKHFAQKKLHLPPGKHKIV----ILDEADSMTAGAQQALR 128 G L L + D I VR QI A+ GK +I+ +DE + + L Sbjct: 256 GFLALFSGDTGEIKSEVREQIN--AKVAEWREEGKAEIIPGVLFIDEVHMLDIESFSFLN 313 Query: 129 RTMELYSNSTRFAFACNQ------------SNKIIEPLQSRCAILRYSKLSDEDVLKRLL 176 R +E A N+ + I L R I+ + S++D + L Sbjct: 314 RALESDMAPV-LIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTTPYSEKDTKQILR 372 Query: 177 QIIKLEDVKYTNDGLEAIIFTA-EGDMRQAINNLQSTV 213 + EDV+ + D + E +R AI + + Sbjct: 373 IRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAAS 410 Score = 29.7 bits (65), Expect = 2.0, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 19/34 (55%), Gaps = 2/34 (5%) Query: 35 QIAKDGNM--PHMIISGMPGIGKTTSVHCLAHEL 66 ++ ++G + ++I+G PG GKT +A L Sbjct: 61 EMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQAL 94 >5VHO-F nrPDB Length = 267 Score = 45.1 bits (105), Expect = 5e-05, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 65/176 (36%), Gaps = 32/176 (18%) Query: 45 MIISGMPGIGKTTSVHCLA---HELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKL 101 +++ G PG GKT A + ++++ D G +VR+ FA K Sbjct: 58 VLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD--GAKLVRDA---FALAKE 112 Query: 102 HLPPGKHKIVILDEADSM--------TAGAQQALRRTMEL--------YSNSTRFAFACN 145 P I+ +DE D++ AG ++ R +EL + + A N Sbjct: 113 KAPS----IIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATN 168 Query: 146 QSNKIIEPLQSRCAI---LRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTA 198 + + + L + + + + +E+ R++QI + + E + Sbjct: 169 RVDILDPALLRSGRLDRKIEF-PMPNEEARARIMQIHSRKMNVSPDVNYEELARCT 223 >6EMW-B nrPDB Length = 225 Score = 44.7 bits (104), Expect = 5e-05, Method: Composition-based stats. Identities = 18/130 (13%), Positives = 44/130 (33%), Gaps = 20/130 (15%) Query: 23 IVGNKETIDRLQQIAKDGN---------MPHMIISGMPGIGKTTSVHCLAHELLGRSYAD 73 ++G K+ ++ + + + + I G G+GKT LA + G D Sbjct: 23 VIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDD--D 80 Query: 74 GVLELNASDDRGIDVVRNQI---------KHFAQKKLHLPPGKHKIVILDEADSMTAGAQ 124 ++ ++ S+ V + Q + + +++ DE + Sbjct: 81 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 140 Query: 125 QALRRTMELY 134 L + ++ Sbjct: 141 NILLQVLDDG 150 >5T0C-AD nrPDB Length = 418 Score = 44.7 bits (104), Expect = 5e-05, Method: Composition-based stats. Identities = 38/236 (16%), Positives = 83/236 (35%), Gaps = 59/236 (25%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASD------DRGIDVVRNQIKHFAQ 98 +++ G PG GKT +AH + + S+ G +VR+ F Sbjct: 202 VLMYGPPGCGKTMLAKAVAH-----HTTAAFIRVVGSEFVQKYLGEGPRMVRDV---FRL 253 Query: 99 KKLHLPPGKHKIVILDEADSM--------TAGAQQALRRTMELYSN--------STRFAF 142 K + P I+ +DE D++ T ++ R +EL + + + Sbjct: 254 AKENAPA----IIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIM 309 Query: 143 ACNQSNKIIEPLQSRCAI---LRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAE 199 A N+++ + L + + + KRL+ + + + Sbjct: 310 ATNRADTLDPALLRPGRLDRKIEFPLPDRRQ--KRLIFSTITSKMNLSEEV--------- 358 Query: 200 GDMRQAINNLQSTVAGHGLVNADNVFKIVDSPHPLIVKK---MLLASNLEDSIQIL 252 +L+ VA ++ ++ I L V++ ++LA + E + + + Sbjct: 359 --------DLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTV 406 >5VC7-A nrPDB Length = 564 Score = 44.7 bits (104), Expect = 5e-05, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 82/251 (32%), Gaps = 45/251 (17%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLEL----NASDDRGIDVVRNQIKHFAQKK 100 ++ G PG+GKT +A E + E+ ++ I + + K A Sbjct: 323 FLLYGPPGVGKTLLAKAVATESNANFISIKGPEVLSKWVGESEKAIREIFKKAKQVAPA- 381 Query: 101 LHLPPGKHKIVILDEADSM-----TAGAQQALRRTMELYSNS---------TRFAFACNQ 146 IV LDE DS+ T R + S A N+ Sbjct: 382 ---------IVFLDEIDSIAPRRGTTSDSGVTERIVNQLLTSLDGIEVMNGVVVIGATNR 432 Query: 147 SNKIIEPLQS--RCAILRYSKLSDEDVLKRLLQIIKLEDVKYTNDG-LEAIIFTAEGDMR 203 + + L R L Y D++ +L++ ++ D L I EG + Sbjct: 433 PDIMDPALLRAGRFDKLIYIPPPDKEARLSILKVHTK-NMPLAPDVDLNDIAQRTEGYVG 491 Query: 204 QAINNLQSTVAGHG--------LVNADNVFKIVDSPHPLIVKKML-----LASNLEDSIQ 250 + NL + V+ N + + P + ++++ L+ + S+ Sbjct: 492 ADLENLCREAGMNAYRENPDATSVSQKNFLDALKTIRPSVDEEVIKFYRTLSETMSKSVS 551 Query: 251 ILRTDLWKKGY 261 R L +G Sbjct: 552 ERRKQLQDQGL 562 Score = 39.7 bits (91), Expect = 0.002, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 45/130 (34%), Gaps = 20/130 (15%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLP 104 +I+ G PG GKT +A+E + E+ + + +I F++ + P Sbjct: 46 VILYGPPGTGKTLIARAVANESGANFLSINGPEIMSKYYGQSEQKLREI--FSKAEETAP 103 Query: 105 PGKHKIVILDEADSMTAGAQ-----------QALRRTME--LYSNSTRFAFACNQSNKII 151 I+ +DE DS+ + L M+ A N+ + I Sbjct: 104 S----IIFIDEIDSIAPKREEVQGEVERRVVAQLLTLMDGMKERGHVIVIGATNRIDAI- 158 Query: 152 EPLQSRCAIL 161 +P R Sbjct: 159 DPALRRPGRF 168 >3SC3-A nrPDB Length = 225 Score = 44.7 bits (104), Expect = 5e-05, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 65/200 (32%), Gaps = 30/200 (15%) Query: 25 GNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCL---AHELLGRSYADGVLELNAS 81 GN E I L+ A + + + G G+T +H A+EL RS+ + Sbjct: 18 GNDELIGALKSAASGDGVQAIYLWGPVKSGRTHLIHAACARANELERRSFYIPL------ 71 Query: 82 DDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGA------QQALRRTMELYS 135 I L + ++ +D+ D++ R E Sbjct: 72 ----------GIHASISTALLEGLEQFDLICIDDVDAVAGHPLWEEAIFDLYNRVAEQKR 121 Query: 136 NSTRFAFACNQSNK--IIEPLQSRC---AILRYSKLSDEDVLKRLLQIIKLEDVKYTNDG 190 S + + + ++ L SR + + D++ L L + + ++ D Sbjct: 122 GSLIVSASASPMEAGFVLPDLVSRMHWGLTYQLQPMMDDEKLAALQRRAAMRGLQLPEDV 181 Query: 191 LEAIIFTAEGDMRQAINNLQ 210 ++ D+R + L Sbjct: 182 GRFLLNRMARDLRTLFDVLD 201 >5VHO-A nrPDB Length = 267 Score = 44.7 bits (104), Expect = 6e-05, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 64/189 (33%), Gaps = 50/189 (26%) Query: 19 VLSDIVGNKETIDRLQQIAKDGNMP-------------HMIISGMPGIGKTTSVHCLAHE 65 SD+ G KE I++L+++ + + +++ G PG GKT +A+ Sbjct: 16 TYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN- 74 Query: 66 LLGRSYADGVLELNASDD------RGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSM 119 + + S+ G +VR + KK L + DE D++ Sbjct: 75 ----RTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACL-------IFFDEIDAI 123 Query: 120 TA-------GAQQALRRTMEL---------YSNSTRFAFACNQSNKIIEPLQSRCAI--- 160 G ++RTM + + A N+ + + L + Sbjct: 124 GGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 183 Query: 161 LRYSKLSDE 169 + +S E Sbjct: 184 IEFSLPDLE 192 >5VFU-A nrPDB Length = 361 Score = 44.7 bits (104), Expect = 6e-05, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 64/189 (33%), Gaps = 50/189 (26%) Query: 19 VLSDIVGNKETIDRLQQIAKDGNMP-------------HMIISGMPGIGKTTSVHCLAHE 65 SD+ G KE I++L+++ + + +++ G PG GKT +A+ Sbjct: 101 TYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN- 159 Query: 66 LLGRSYADGVLELNASDD------RGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSM 119 + + S+ G +VR + KK L + DE D++ Sbjct: 160 ----RTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACL-------IFFDEIDAI 208 Query: 120 TA-------GAQQALRRTMEL---------YSNSTRFAFACNQSNKIIEPLQSRCAI--- 160 G ++RTM + + A N+ + + L + Sbjct: 209 GGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 268 Query: 161 LRYSKLSDE 169 + +S E Sbjct: 269 IEFSLPDLE 277 >6EF3-H nrPDB Length = 467 Score = 44.7 bits (104), Expect = 6e-05, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 50/150 (33%), Gaps = 37/150 (24%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDD------RGIDVVRNQIKHFAQ 98 +++ G PG GKT +A+ + + S+ G +VR + Sbjct: 246 ILLYGPPGTGKTLCARAVAN-----RTDATFIRVIGSELVQKYVGEGARMVRELFEMART 300 Query: 99 KKLHLPPGKHKIVILDEADSMTA-------GAQQALRRTMEL---------YSNSTRFAF 142 KK I+ DE D++ G ++RTM + + F Sbjct: 301 KKAC-------IIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMF 353 Query: 143 ACNQSNKIIEPLQSRCAI---LRYSKLSDE 169 A N+ N + L I + +S E Sbjct: 354 ATNRPNTLDPALLRPGRIDRKVEFSLPDLE 383 >6B5C-A nrPDB Length = 307 Score = 44.7 bits (104), Expect = 6e-05, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 59/178 (33%), Gaps = 29/178 (16%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLP 104 +++ G PG GKT +A E G ++ + S RG ++ + Sbjct: 61 VLMVGPPGTGKTMLAKAVATEC-GTTFFNVSSSTLTSKYRGES---EKLVRLLFEMARFY 116 Query: 105 PGKHKIVILDEADSM-----TAGAQQALRRTM----------------ELYSNSTRFAFA 143 + +D+ DS+ T+ +A RR + S A Sbjct: 117 AP--TTIFIDQIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAA 174 Query: 144 CNQSNKIIEPLQSRCAILRYSKLSDEDVLKRLLQIIKLEDVKYTNDG-LEAIIFTAEG 200 N I E L+ R Y L LL+I E V+ D LE I EG Sbjct: 175 TNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKINLRE-VELDPDIQLEDIAEKIEG 231 >5G4G-A nrPDB Length = 721 Score = 44.4 bits (103), Expect = 8e-05, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 57/177 (32%), Gaps = 32/177 (18%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLEL----NASDDRGIDVVRNQIKHFAQKK 100 ++ G PG+GKT +A E + E+ ++ I + + K A Sbjct: 499 FLLYGPPGVGKTLLAKAVATESNANFISIKGPEVLSKWVGESEKAIREIFKKAKQVAPA- 557 Query: 101 LHLPPGKHKIVILDEADSM-----TAGAQQALRRTMELYSNS---------TRFAFACNQ 146 IV LDE DS+ T R + S A N+ Sbjct: 558 ---------IVFLDEIDSIAPRRGTTSDSGVTERIVNQLLTSLDGIEVMNGVVVIGATNR 608 Query: 147 SNKIIEPLQS--RCAILRYSKLSDEDVLKRLLQIIKLEDVKYTNDG-LEAIIFTAEG 200 + + L R L Y D++ +L++ ++ D L I EG Sbjct: 609 PDIMDPALLRAGRFDKLIYIPPPDKEARLSILKVHTK-NMPLAPDVDLNDIAQRTEG 664 Score = 39.4 bits (90), Expect = 0.002, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 45/130 (34%), Gaps = 20/130 (15%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLP 104 +I+ G PG GKT +A+E + E+ + + +I F++ + P Sbjct: 222 VILYGPPGTGKTLIARAVANESGANFLSINGPEIMSKYYGQSEQKLREI--FSKAEETAP 279 Query: 105 PGKHKIVILDEADSMTAGAQ-----------QALRRTME--LYSNSTRFAFACNQSNKII 151 I+ +DE DS+ + L M+ A N+ + I Sbjct: 280 S----IIFIDEIDSIAPKREEVQGEVERRVVAQLLTLMDGMKERGHVIVIGATNRIDAI- 334 Query: 152 EPLQSRCAIL 161 +P R Sbjct: 335 DPALRRPGRF 344 >5D4W-A nrPDB Length = 926 Score = 44.4 bits (103), Expect = 8e-05, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 65/190 (34%), Gaps = 19/190 (10%) Query: 16 RPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADG- 74 R + ++G +E I R+ +I + ++ G PG+GKTT V LA ++ D Sbjct: 190 REGKIDPVIGREEEIRRVIRILSRRTKNNPVLIGEPGVGKTTIVEGLAQRIVNADVPDNL 249 Query: 75 ----VLELN-ASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIV-ILDEADSMTA------- 121 +L L+ + G + + K I+ +D + Sbjct: 250 AACKLLSLDVGALVAGSKYRGEFEERMKGVLKEIQESKETIILFVDAIHLLMGAGSSGEG 309 Query: 122 --GAQQALRRTMELYSNSTRFAFACNQSNKIIE---PLQSRCAILRYSKLSDEDVLKRLL 176 A L+ + A + K IE + R + + S + + L Sbjct: 310 GMDAANLLKPMLARGQLHCIGATTLAEYRKYIEKDAAFERRFQQVLVKEPSISETISILR 369 Query: 177 QIIKLEDVKY 186 + + +V + Sbjct: 370 GLKEKYEVHH 379 Score = 35.9 bits (81), Expect = 0.026, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 18/53 (33%), Gaps = 8/53 (15%) Query: 23 IVGNKETIDRLQQIAKDGNM--------PHMIISGMPGIGKTTSVHCLAHELL 67 +VG KE + + + P + G G GKT LA L Sbjct: 600 VVGQKEAVQSVSNAIRLQRSGLSNPNQPPSFLFCGPSGTGKTLLTKALAEFLF 652 >5VFP-F nrPDB Length = 396 Score = 44.4 bits (103), Expect = 8e-05, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 65/176 (36%), Gaps = 32/176 (18%) Query: 45 MIISGMPGIGKTTSVHCLA---HELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKL 101 +++ G PG GKT A + ++++ D G +VR+ FA K Sbjct: 180 VLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD--GAKLVRDA---FALAKE 234 Query: 102 HLPPGKHKIVILDEADSM--------TAGAQQALRRTMEL--------YSNSTRFAFACN 145 P I+ +DE D++ AG ++ R +EL + + A N Sbjct: 235 KAPS----IIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATN 290 Query: 146 QSNKIIEPLQSRCAI---LRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTA 198 + + + L + + + + +E+ R++QI + + E + Sbjct: 291 RVDILDPALLRSGRLDRKIEF-PMPNEEARARIMQIHSRKMNVSPDVNYEELARCT 345 >3CF0-A nrPDB Length = 301 Score = 44.0 bits (102), Expect = 8e-05, Method: Composition-based stats. Identities = 31/196 (15%), Positives = 57/196 (29%), Gaps = 34/196 (17%) Query: 27 KETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELN----ASD 82 + L+ ++ G PG GKT +A+E + EL Sbjct: 36 EHPDKFLKFGMTPSK--GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGES 93 Query: 83 DRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAG-------AQQALRRTMEL-- 133 + + + ++ + A ++ DE DS+ A R + Sbjct: 94 EANVREIFDKARQAAPC----------VLFFDELDSIAKARGGNIGDGGGAADRVINQIL 143 Query: 134 -------YSNSTRFAFACNQSNKIIEPLQS--RCAILRYSKLSDEDVLKRLLQIIKLEDV 184 + A N+ + I + R L Y L DE +L+ + Sbjct: 144 TEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSP 203 Query: 185 KYTNDGLEAIIFTAEG 200 + LE + G Sbjct: 204 VAKDVDLEFLAKMTNG 219 >2XSZ-A nrPDB Length = 367 Score = 44.0 bits (102), Expect = 8e-05, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 75/215 (34%), Gaps = 32/215 (14%) Query: 49 GMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGI-----DVVRNQI-----KHFAQ 98 G PGI + ++H L +L + + D +R +I K+ Q Sbjct: 141 GPPGIIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQ 200 Query: 99 KKLHLPPGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQ------------ 146 L PG ++ +DE + L R +E S + FA N+ Sbjct: 201 GIAELVPG---VLFVDEVHMLDIECFTYLHRALES-SIAPIVIFASNRGNCVIRGTEDIT 256 Query: 147 -SNKIIEPLQSRCAILRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFT-AEGDMRQ 204 + I L R I+R + +++ + + + E + + + L + + +R Sbjct: 257 SPHGIPLDLLDRVMIIRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRY 316 Query: 205 AINNLQSTVAGHGLVNADNVFKIVDSPHPLIVKKM 239 ++ L + D++ + H + ++ Sbjct: 317 SVQLLTPANLLAKINGKDSI----EKEHVEEISEL 347 Score = 41.3 bits (95), Expect = 6e-04, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 49/112 (43%), Gaps = 8/112 (7%) Query: 23 IVGNKETIDR---LQQIAKDGNM--PHMIISGMPGIGKTTSVHCLAHELLGRSYADGVL- 76 +VG + + + ++ K M ++++G PG GKT +A EL + ++ Sbjct: 53 LVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVG 112 Query: 77 -ELNASDDRGIDVVRNQIKHFAQKKL-HLPPGKHKIVILDEADSMTAGAQQA 126 E+ +++ + +V+ + ++ PPG + V L + D A Q Sbjct: 113 SEVYSTEIKKTEVLMENFRRAIGLRIKEGPPGIIQDVTLHDLDVANARPQGG 164 >5ZQM-A nrPDB Length = 309 Score = 44.0 bits (102), Expect = 9e-05, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 60/178 (33%), Gaps = 29/178 (16%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLP 104 +++ G PG GKT +A E + L + + + + A+ Sbjct: 65 VLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMAR---FYS 121 Query: 105 PGKHKIVILDEADSM-----TAGAQQALRRTM----------------ELYSNSTRFAFA 143 P + +DE DS+ T+ +A RR + S A Sbjct: 122 PA---TIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAA 178 Query: 144 CNQSNKIIEPLQSRCAILRYSKLSDEDVLKRLLQIIKLEDVKYTNDG-LEAIIFTAEG 200 N I E L+ R Y L + LL+I E ++ +D L +I EG Sbjct: 179 TNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRISLRE-LELADDVDLASIAENMEG 235 >6EPD-M nrPDB Length = 442 Score = 44.0 bits (102), Expect = 1e-04, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 65/176 (36%), Gaps = 32/176 (18%) Query: 45 MIISGMPGIGKTTSVHCLA---HELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKL 101 +++ G PG GKT A + ++++ D G +VR+ FA K Sbjct: 226 VLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD--GAKLVRDA---FALAKE 280 Query: 102 HLPPGKHKIVILDEADSM--------TAGAQQALRRTMEL--------YSNSTRFAFACN 145 P I+ +DE D++ AG ++ R +EL + + A N Sbjct: 281 KAPS----IIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATN 336 Query: 146 QSNKIIEPLQSRCAI---LRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTA 198 + + + L + + + + +E+ R++QI + + E + Sbjct: 337 RVDILDPALLRSGRLDRKIEF-PMPNEEARARIMQIHSRKMNVSPDVNYEELARCT 391 >2R44-A nrPDB Length = 331 Score = 43.6 bits (101), Expect = 1e-04, Method: Composition-based stats. Identities = 39/176 (22%), Positives = 66/176 (37%), Gaps = 23/176 (13%) Query: 23 IVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVL-ELNAS 81 +VG K I+RL G H+++ G+PG+ KT SV+ LA + + +L S Sbjct: 29 VVGQKYMINRLLIGICTGG--HILLEGVPGLAKTLSVNTLAKTMDLDFHRIQFTPDLLPS 86 Query: 82 DDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTMEL-------- 133 D G + +F KK + ++ DE + A Q AL M+ Sbjct: 87 DLIGTMIYNQHKGNFEVKKGPVFS---NFILADEVNRSPAKVQSALLECMQEKQVTIGDT 143 Query: 134 -YSNSTRFAFACNQ-------SNKIIEPLQSRCAI-LRYSKLSDEDVLKRLLQIIK 180 Y F Q + + E R + + + L E L+ + ++ Sbjct: 144 TYPLDNPFLVLATQNPVEQEGTYPLPEAQVDRFMMKIHLTYLDKESELEVMRRVSN 199 >6EPC-H nrPDB Length = 433 Score = 43.2 bits (100), Expect = 2e-04, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 64/189 (33%), Gaps = 50/189 (26%) Query: 19 VLSDIVGNKETIDRLQQIAKDGNMP-------------HMIISGMPGIGKTTSVHCLAHE 65 SD+ G KE I++L+++ + + +++ G PG GKT +A+ Sbjct: 173 TYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVAN- 231 Query: 66 LLGRSYADGVLELNASDD------RGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSM 119 + + S+ G +VR + KK L + DE D++ Sbjct: 232 ----RTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACL-------IFFDEIDAI 280 Query: 120 TA-------GAQQALRRTMEL---------YSNSTRFAFACNQSNKIIEPLQSRCAI--- 160 G ++RTM + + A N+ + + L + Sbjct: 281 GGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRK 340 Query: 161 LRYSKLSDE 169 + +S E Sbjct: 341 IEFSLPDLE 349 >1R6B-X nrPDB Length = 758 Score = 43.2 bits (100), Expect = 2e-04, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 69/201 (34%), Gaps = 22/201 (10%) Query: 20 LSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELN 79 + ++G ++ ++R Q+ + ++ G G+GKT LA ++ + + + Sbjct: 185 IDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCT 244 Query: 80 ------ASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTME- 132 S G + K F L + I+ +DE ++ + + Sbjct: 245 IYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAA 304 Query: 133 ------LYSNSTRFAFACNQ-----SNKIIEPLQSRCAILRYSKLSDEDVLKRLLQII-- 179 L S R + + L R + ++ S E+ ++ + + Sbjct: 305 NLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPK 364 Query: 180 --KLEDVKYTNDGLEAIIFTA 198 DV+YT + A + A Sbjct: 365 YEAHHDVRYTAKAVRAAVELA 385 Score = 39.0 bits (89), Expect = 0.003, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 95/285 (33%), Gaps = 41/285 (14%) Query: 23 IVGNKETIDRLQQIAK-----DGNMP----HMIISGMPGIGKTTSVHCLAHELLGRSYAD 73 + G + I+ L + K G+ + +G G+GKT L+ L Sbjct: 460 VFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRF 519 Query: 74 GVLE---------LNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQ 124 + E L + + + + + H +++LDE + Sbjct: 520 DMSEYMERHTVSRLIGAPPGYVGFDQGGL-----LTDAVIKHPHAVLLLDEIEKAHPDVF 574 Query: 125 QALRRTMELYSNSTRFAFACNQSNKIIEPLQSRCAILRYSKLSDEDVLKRLLQIIKLEDV 184 L + M+ + +N ++ ++ + E K + I + Sbjct: 575 NILLQVMDNGT--------LTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDN-- 624 Query: 185 KYTNDGLEAIIFTAEGDMRQAINNLQSTVAGHGLVNADNVFKIVDSPHPLIVKKMLLASN 244 + D +E I + R N L + + L + D + ++VD + ++ Sbjct: 625 --STDAMEEIKKIFTPEFR---NRLDNIIWFDHL-STDVIHQVVDKFIVELQVQLDQKGV 678 Query: 245 LEDSIQILRTDLWKKGYSSIDIVTTSFRVTKNLAQVKESVRLEMI 289 + Q R L +KGY RV ++ +K+ + E++ Sbjct: 679 SLEVSQEARNWLAEKGYDRAMGARPMARVIQD--NLKKPLANELL 721 >3M6A-A nrPDB Length = 543 Score = 42.8 bits (99), Expect = 2e-04, Method: Composition-based stats. Identities = 41/202 (20%), Positives = 74/202 (36%), Gaps = 43/202 (21%) Query: 32 RLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLE--LNASDDRGIDVV 89 +Q++ K P + ++G PG+GKT+ +A L GR + L + S+ RG Sbjct: 98 AVQKLTKSLKGPILCLAGPPGVGKTSLAKSIAKSL-GRKFVRISLGGVRDESEIRG---- 152 Query: 90 RNQIKHFAQKKLHLPPGKHK------IVILDEADSMT----AGAQQALRRTMELYSNS-- 137 ++ + + G K + +LDE D M+ A+ ++ NS Sbjct: 153 -HRRTYVGAMPGRIIQGMKKAGKLNPVFLLDEIDKMSSDFRGDPSSAMLEVLDPEQNSSF 211 Query: 138 -------------TRFAFACNQSNKIIEPLQSRCAILRYSKLSD----EDVLKRLL---- 176 F N I PL+ R I+ + ++ E V LL Sbjct: 212 SDHYIEETFDLSKVLFIATANNLATIPGPLRDRMEIINIAGYTEIEKLEIVKDHLLPKQI 271 Query: 177 --QIIKLEDVKYTNDGLEAIIF 196 +K +++ + + II Sbjct: 272 KEHGLKKSNLQLRDQAILDIIR 293 >2Z4R-A nrPDB Length = 440 Score = 42.8 bits (99), Expect = 2e-04, Method: Composition-based stats. Identities = 35/227 (15%), Positives = 80/227 (35%), Gaps = 24/227 (10%) Query: 32 RLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRN 91 L+ G + I G G+GKT + + + ++ V+ + + + + Sbjct: 120 ALEVAKHPGRYNPLFIYGGVGLGKTHLLQSIGNYVVQNEPDLRVMYITSE-----KFLND 174 Query: 92 QIKHFAQKKLHLPPGKH----KIVILDEADSMTA--GAQQALRRTMELYSNSTRFAFACN 145 + + KL+ K+ I+++D+ + G Q L T +S + C+ Sbjct: 175 LVDSMKEGKLNEFREKYRKKVDILLIDDVQFLIGKTGVQTELFHTFNELHDSGKQIVICS 234 Query: 146 QSNK-----IIEPLQSRC---AILRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFT 197 + L SR + + +E +++++E + + L + Sbjct: 235 DREPQKLSEFQDRLVSRFQMGLVAKLEPPDEETRKSIARKMLEIEHGELPEEVLNFVAEN 294 Query: 198 AEGDMRQ----AINNLQSTVAGHGLVN-ADNVFKIVDSPHPLIVKKM 239 + ++R+ I L V+ + + + D P VK M Sbjct: 295 VDDNLRRLRGAIIKLLVYKETTGKEVDLKEAILLLKDFIKPNRVKAM 341 >5VQ9-D nrPDB Length = 432 Score = 42.8 bits (99), Expect = 2e-04, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 59/168 (35%), Gaps = 27/168 (16%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYA----DGVLELNASD--DRGIDVVRNQIKHFAQ 98 +++ G PG GKT+ LA +L R + ++E+N+ + + Q Sbjct: 175 VLLHGPPGTGKTSLCKALAQKLTIRLSSRYRYGQLIEINSHSLFSKWFSESGKLVTKMFQ 234 Query: 99 KKLHLPPGKHKIVI--LDEADSMTAGAQQALRRTME------------------LYSNST 138 K L K +V +D+ +S+TA A+ A R E ++ Sbjct: 235 KIQDLIDDKDALVFVLIDQVESLTA-ARNACRAGTEPSDAIRVVNAVLTQIDQIKRHSNV 293 Query: 139 RFAFACNQSNKIIEPLQSRCAILRYSKLSDEDVLKRLLQIIKLEDVKY 186 N + KI R I +Y + ++ E +K Sbjct: 294 VILTTSNITEKIDVAFVDRADIKQYIGPPSAAAIFKIYLSCLEELMKC 341 >5E7P-A nrPDB Length = 745 Score = 42.8 bits (99), Expect = 2e-04, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 55/158 (34%), Gaps = 36/158 (22%) Query: 45 MIISGMPGIGKTTSVHCLA-------HELLGRSYADGVLELNASDDRGIDVVRNQIKHFA 97 +++ G PG GKT V LA H + G D + S ++ + + FA Sbjct: 522 VLLYGPPGCGKTFVVRALASSGRLSVHAVKGSELMDKWV---GSSEKAVREL------FA 572 Query: 98 QKKLHLPPGKHKIVILDEADSM------------TAGAQQALRRTME--LYSNSTRFAFA 143 + + P +V LDE D++ T +L ++ A Sbjct: 573 RARDSAPS----LVFLDEIDALAPRRGQNFDSGVTDKVVASLLTELDGIEPLRDVVVLGA 628 Query: 144 CNQSNKIIEPLQS--RCAILRYSKLSDEDVLKRLLQII 179 N+ + I L R L + + D + +L+ Sbjct: 629 TNRPDLIDPALLRPGRLERLVFVEPPDAAARRDILRTA 666 Score = 32.8 bits (73), Expect = 0.22, Method: Composition-based stats. Identities = 22/159 (13%), Positives = 54/159 (33%), Gaps = 24/159 (15%) Query: 40 GNMPHM--IISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFA 97 G PH+ ++SG G+GK T V + + V+EL+ + + V +++ Sbjct: 259 GATPHLGVLVSGPAGVGKATMVRAVC-------ASRRVVELDGPEVGALQ-VDERLRSVT 310 Query: 98 QKKLHLPPGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSR 157 + ++ + + D++ + M A ++ + + + Sbjct: 311 SAVAAVTESG-GVLFIADVDALLPAGNE-----MRPPEPVATLILA-----ELRKAVATP 359 Query: 158 CAILRYSKLSDEDVLKRLL--QIIKLE-DVKYTNDGLEA 193 + E+V RL ++ E + + Sbjct: 360 GVAFIATSAVPENVDARLRAPEVCDRELGLSLPDATARR 398 >5KWA-A nrPDB Length = 497 Score = 42.8 bits (99), Expect = 2e-04, Method: Composition-based stats. Identities = 26/178 (14%), Positives = 56/178 (31%), Gaps = 30/178 (16%) Query: 45 MIISGMPGIGKTTSVHCLAHEL---LGRSYADGVLELNAS--DDRGIDVVRNQIKH---- 95 +++ G PG GKT +A+ L + D E + + +G +++ + Sbjct: 184 VLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVGETERH 243 Query: 96 ----FAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTME--------------LYSNS 137 F + + G IV DE DS+ + +E + Sbjct: 244 IRLIFQRAREKASEGTPVIVFFDEMDSIFRTRGTGVSSDVETTVVPQLLSEIDGVEGLEN 303 Query: 138 TRFAFACNQSNKIIEPLQSRCAI---LRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLE 192 A N+ + I + + ++ + E + + + +D E Sbjct: 304 VIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQDIYSKYLTEFLPVHADDLAE 361 >6QEL-G nrPDB Length = 245 Score = 42.8 bits (99), Expect = 2e-04, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 4/97 (4%) Query: 22 DIVGNKETIDRLQQIAK--DGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELN 79 + G + + +Q + DGN+ I SG PG GK + +ELL R + ++ + Sbjct: 77 ECEGQMNALSKARQYVEEFDGNIASFIFSGKPGTGKNHLAAAICNELLLRGKSVLIITVA 136 Query: 80 ASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEA 116 D RN ++++L ++++DE Sbjct: 137 DIMSAMKDTFRNSGT--SEEQLLNDLSNVDLLVIDEI 171 >1XXI-E nrPDB Length = 334 Score = 42.4 bits (98), Expect = 2e-04, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 61/163 (37%), Gaps = 27/163 (16%) Query: 31 DRLQQIAKDGNMPH-MIISGMPGIGKTTSVHCLAHELLGRSYA----------------- 72 ++L + G H ++I +PG+G ++ L+ LL + Sbjct: 12 EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAG 71 Query: 73 -----DGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQQAL 127 + + G+D VR + H G K+V + +A +T A AL Sbjct: 72 THPDYYTLAPEKGKNTLGVDAVREVTEKL---NEHARLGGAKVVWVTDAALLTDAAANAL 128 Query: 128 RRTMELYSNSTRFAFACNQSNKIIEPLQSRCAILRYSKLSDED 170 +T+E T F A + +++ L+SRC L Y E Sbjct: 129 LKTLEEPPAETWFFLATREPERLLATLRSRCR-LHYLAPPPEQ 170 >3SYK-A nrPDB Length = 309 Score = 42.4 bits (98), Expect = 3e-04, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 63/168 (37%), Gaps = 21/168 (12%) Query: 44 HMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQ-KKLH 102 HM +G PG GKTT +A L Y + D+V I H A K Sbjct: 69 HMSFTGNPGTGKTTVALKMAGLLHRLGYVRKGHLV---SVTRDDLVGQYIGHTAPKTKEV 125 Query: 103 LPPGKHKIVILDEADSMTA---------GAQQALRRTMELYSNSTRFAFACNQSNKIIEP 153 L ++ +DEA + A + L + ME + A ++++ Sbjct: 126 LKRAMGGVLFIDEAYYLYRPDNERDYGQEAIEILLQVMENNRDDLVVILA-GYADRMENF 184 Query: 154 LQS----RCAI---LRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAI 194 QS R I + + SDE++ + ++ ++ + T + A+ Sbjct: 185 FQSNPGFRSRIAHHIEFPDYSDEELFEIAGHMLDDQNYQMTPEAETAL 232 >4CIU-A nrPDB Length = 727 Score = 42.0 bits (97), Expect = 3e-04, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 79/220 (35%), Gaps = 34/220 (15%) Query: 7 LQLPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHEL 66 + E+ L ++G E I R Q+ + + ++ G PG+GKT V LA + Sbjct: 22 YTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRI 81 Query: 67 LGRSY-----------ADGVLELNASDDRG--IDVVRNQIKHFAQKKLHLPPGKHKIVIL 113 + D + + RG + ++ + A+++ ++ I+ + Sbjct: 82 INGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNV------ILFI 135 Query: 114 DEADSMTA--------GAQQALRRTMELYSNSTRFAFACNQSNKIIE---PLQSRCAILR 162 D +M A L+ + A ++ + IE L+ R + Sbjct: 136 DALHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVF 195 Query: 163 YSKLSDEDVLKRLLQIIK----LEDVKYTNDGLEAIIFTA 198 ++ S ED + L + + V+ T+ + A + Sbjct: 196 VAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLS 235 Score = 35.1 bits (79), Expect = 0.042, Method: Composition-based stats. Identities = 22/180 (12%), Positives = 57/180 (31%), Gaps = 23/180 (12%) Query: 23 IVGNKETIDRLQQIAKDGN---------MPHMIISGMPGIGKTTSVHCLAHELLGRSYAD 73 ++G E +D + + + + G G+GKT LA+ + + Sbjct: 428 VIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSD--E 485 Query: 74 GVLELNASDDRGIDVVRNQI---------KHFAQKKLHLPPGKHKIVILDEADSMTAGAQ 124 ++ ++ S+ V + + + + +++LD + Sbjct: 486 AMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDAVEKAHPDVF 545 Query: 125 QALRRTMELYS---NSTRFAFACNQSNKIIEPLQSRCAILRYSKLSDEDVLKRLLQIIKL 181 L + ++ R N + L S R+ +L + + +L ++ Sbjct: 546 NILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSH 605 >6MAT-A nrPDB Length = 813 Score = 42.0 bits (97), Expect = 3e-04, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 71/210 (33%), Gaps = 26/210 (12%) Query: 45 MIISGMPGIGKTTSVHCLAHEL---LGRSYADGVLELNASDDRGID-------------- 87 +++ G G GKTT H +A + A V+ + + Sbjct: 239 VLLHGPSGCGKTTLAHAIAGSIGVAFIPVSAPSVIGGTSGESEKNIRDVFDEAIRLAPCL 298 Query: 88 VVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQS 147 + +QI A ++ G ++ + + M Q + A N+ Sbjct: 299 IFLDQIDAIAGRRESANKGMESRIVAEIMNGMDRIRQNTPL------GKNVVVLAATNRP 352 Query: 148 NKIIEPLQSRCAILRYSKLSDEDVLKRLLQIIKLEDVKYTNDG-LEAIIFTAEGDMRQAI 206 + ++ R ++ + E +++L+ + D+ +D + + G + + Sbjct: 353 EFLDPAIRRRFSVEIDMGMPSERAREQILRSLTR-DLSLADDINFKELAKMTPGYVGSDL 411 Query: 207 N-NLQSTVAGHGLVNADNVFKIVDSPHPLI 235 +++ V+ N D++ + HP Sbjct: 412 QYVVKAAVSESFQANIDSLLAQARAKHPAD 441 Score = 37.4 bits (85), Expect = 0.009, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 55/154 (35%), Gaps = 24/154 (15%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLE-LNASDDRGIDVVRNQIKHFAQKKLHL 103 +++ G PG GKT +A+E + E LN VR F++ K Sbjct: 538 ILLWGPPGCGKTLVAKAVANESKANFISIKGPELLNKYVGESERAVRQL---FSRAKSSA 594 Query: 104 PPGKHKIVILDEADSM-------TAGAQQALRRTMELYS------NSTRFAFACNQSNKI 150 P I+ D+ D++ + A + T+ + A N+ + I Sbjct: 595 PC----ILFFDQMDALVPRRDDSLSDASARVVNTLLTELDGVGDRSGIYVIGATNRPDMI 650 Query: 151 IEPLQSRCAI---LRYSKLSDEDVLKRLLQIIKL 181 E ++ + + S ED +K L + + Sbjct: 651 DEAIRRPGRLGTSIYVGLPSAEDRVKILKTLYRN 684 >1JBK-A nrPDB Length = 195 Score = 42.0 bits (97), Expect = 3e-04, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 72/200 (36%), Gaps = 30/200 (15%) Query: 1 MSKTLSLQLPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVH 60 M + E+ L ++G E I R Q+ + + ++ G PG+GKT V Sbjct: 2 MQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVE 61 Query: 61 CLAHELLGRSY-----------ADGVLELNASDDRG--IDVVRNQIKHFAQKKLHLPPGK 107 LA ++ D + + RG + ++ + A+++ ++ Sbjct: 62 GLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNV---- 117 Query: 108 HKIVILDEADSMTA--------GAQQALRRTMELYSNSTRFAFACNQSNKIIE---PLQS 156 I+ +DE +M A L+ + A ++ + IE L+ Sbjct: 118 --ILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALER 175 Query: 157 RCAILRYSKLSDEDVLKRLL 176 R + ++ S ED + L Sbjct: 176 RFQKVFVAEPSVEDTIAILR 195 >3EXA-A nrPDB Length = 322 Score = 42.0 bits (97), Expect = 3e-04, Method: Composition-based stats. Identities = 40/225 (17%), Positives = 71/225 (31%), Gaps = 26/225 (11%) Query: 49 GMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKH 108 G +GKT + LA L G + +++ RG+D+ +I + H Sbjct: 10 GPTAVGKTKTSVMLAKRLNGEVISGDSMQV----YRGMDIGTAKIT----AEEMDGVPHH 61 Query: 109 KIVILDEADSMT-AGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSRCAILRYSKLS 167 I I D ++S + A Q + R F + + + + + Sbjct: 62 LIDIKDPSESFSVADFQDLATPLITEIHERGRLPFLVGGTGLYVNAVIHQFNLGDIRA-- 119 Query: 168 DEDVLKRLLQIIKLEDV--------KYTNDGLEAIIFTAEGDMRQAINNLQSTVAGHGLV 219 DED L + V K AI + R+ I L+ V Sbjct: 120 DEDYRHELEAFVNSYGVQALHDKLSKIDPKAAAAI---HPNNYRRVIRALEIIKLTGKTV 176 Query: 220 NADNVFKIVDSPHPLIVKKMLL---ASNLEDSIQILRTDLWKKGY 261 + ++P P + + L L D I + ++G Sbjct: 177 TEQARHE-EETPSPYNLVMIGLTMERDVLYDRINRRVDQMVEEGL 220 >5OFO-C nrPDB Length = 871 Score = 42.0 bits (97), Expect = 4e-04, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 79/220 (35%), Gaps = 34/220 (15%) Query: 7 LQLPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHEL 66 + E+ L ++G E I R Q+ + + ++ G PG+GKT V LA + Sbjct: 168 YTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRI 227 Query: 67 LGRSY-----------ADGVLELNASDDRG--IDVVRNQIKHFAQKKLHLPPGKHKIVIL 113 + D + + RG + ++ + A+++ ++ I+ + Sbjct: 228 INGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNV------ILFI 281 Query: 114 DEADSMTA--------GAQQALRRTMELYSNSTRFAFACNQSNKIIE---PLQSRCAILR 162 D +M A L+ + A ++ + IE L+ R + Sbjct: 282 DALHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVF 341 Query: 163 YSKLSDEDVLKRLLQIIK----LEDVKYTNDGLEAIIFTA 198 ++ S ED + L + + V+ T+ + A + Sbjct: 342 VAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLS 381 Score = 34.3 bits (77), Expect = 0.062, Method: Composition-based stats. Identities = 15/130 (11%), Positives = 42/130 (32%), Gaps = 20/130 (15%) Query: 23 IVGNKETIDRLQQIAKDGN---------MPHMIISGMPGIGKTTSVHCLAHELLGRSYAD 73 ++G E +D + + + + G G+GKT LA+ + + Sbjct: 574 VIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSD--E 631 Query: 74 GVLELNASDDRGIDVVRNQI---------KHFAQKKLHLPPGKHKIVILDEADSMTAGAQ 124 ++ ++ S+ V + + + + +++LD + Sbjct: 632 AMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDAVEKAHPDVF 691 Query: 125 QALRRTMELY 134 L + ++ Sbjct: 692 NILLQVLDDG 701 >5UJM-A nrPDB Length = 522 Score = 41.7 bits (96), Expect = 4e-04, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 76/219 (34%), Gaps = 38/219 (17%) Query: 27 KETIDRLQQIAKDGNMPH----MIISGMPGIGKTTSVHCLAHELLGRSYADGV-----LE 77 ++ + + + H M ISG+PG GKT +VH + L + A+ V +E Sbjct: 169 EQEFQDIYNFVESKLLDHTGGCMYISGVPGTGKTATVHEVIRCLQQAAQANDVPPFQYIE 228 Query: 78 LNASDDRGIDVVRNQI-------KHFAQKKLHLPPGKH---------KIVILDEADSMTA 121 +N V QI K A L + ++++DE D + Sbjct: 229 VNGMKLTEPHQVYVQILQKLTGQKATANHAAELLAKQFCTRGSPQETTVLLVDELDILWT 288 Query: 122 GAQQALRRTMELYS---NSTRFAFACNQSNK----IIEPLQSRCAILR--YSKLSDEDVL 172 Q + + + N + ++ + SR + R + + + Sbjct: 289 HKQDIMYNLFDWPTHKEARLVVLAIANTMDLPERIMMNRVSSRLGLTRMCFQPYTYSQLQ 348 Query: 173 KRLLQIIKLEDVKYTNDGLEAIIFTAE---GDMRQAINN 208 + L +K + +D ++ + GD R+ ++ Sbjct: 349 QILRSRLKHLK-AFEDDAIQLVARKVAALSGDARRCLDI 386 >2QBY-B nrPDB Length = 384 Score = 41.3 bits (95), Expect = 5e-04, Method: Composition-based stats. Identities = 43/233 (18%), Positives = 85/233 (36%), Gaps = 39/233 (16%) Query: 46 IISGMPGIGKTTSVHCLAHELLGRSYAD-----------GVLELNASDDRGIDVVRNQIK 94 + G+ G GKT + +E+ D E+ + + + ++ Sbjct: 49 LFLGLTGTGKTFVSKYIFNEIEEVKKEDEEYKDVKQAYVNCREVGGTPQAVLSSLAGKLT 108 Query: 95 HFAQKKLHLPPGKH------------KIVILDEADSMTA--GAQQALRRTMELYSNSTRF 140 F+ K + G++ I+ LDE D++ G L + + + Sbjct: 109 GFSVPKHGINLGEYIDKIKNGTRNIRAIIYLDEVDTLVKRRGGDIVLYQLLRS-DANISV 167 Query: 141 AFACNQSN--KIIEP--LQSRCAILRYSKLSDEDVLKRLLQIIKLEDVK--YTNDGLEAI 194 N N +EP L S + + E + L + + +K Y ++ L I Sbjct: 168 IMISNDINVRDYMEPRVLSSLGPSVIFKPYDAEQLKFILSKYAEYGLIKGTYDDEILSYI 227 Query: 195 IFTAE---GDMRQAINNL---QSTVAGHGLVNADNVFK-IVDSPHPLIVKKML 240 + GD R+A+N L +G G++ ++V K IVD +++ + Sbjct: 228 AAISAKEHGDARKAVNLLFRAAQLASGGGIIRKEHVDKAIVDYEQERLIEAVK 280 >5V8F-9 nrPDB Length = 513 Score = 41.3 bits (95), Expect = 5e-04, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 62/171 (36%), Gaps = 34/171 (19%) Query: 17 PQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVL 76 P ++ ++ ++ L + + + I+G PG GKT + + + L Sbjct: 79 PARTAEY---EQVMNFLAKAISEHRSDSLYITGPPGTGKTAQLDMIIRQKFQ------SL 129 Query: 77 ELNASDDRGIDVVRNQIKHFAQKKLH-LPPGKHKIVILDEADSMTAGAQ----------- 124 L+ S R DV+R+ + LP G+ + V + + ++ G Sbjct: 130 PLSLSTPRSKDVLRHTNPNLQNLSWFELPDGRLESVAVTSINCISLGEPSSIFQKIFDSF 189 Query: 125 -------------QALRRTMELYSNSTRFAFACNQSNKIIEPLQSRCAILR 162 Q L++ +E Y T F ++ ++++ S +R Sbjct: 190 QDLNGPTLQIKNMQHLQKFLEPYHKKTTFVVVLDEMDRLLHANTSETQSVR 240 >4LJ8-A nrPDB Length = 339 Score = 41.3 bits (95), Expect = 6e-04, Method: Composition-based stats. Identities = 28/236 (11%), Positives = 66/236 (27%), Gaps = 58/236 (24%) Query: 23 IVGNKETIDRLQQIAKDGN---------MPHMIISGMPGIGKTTSVHCLAHELLGRSYAD 73 +VG E I + + + + G G+GKT LA L + Sbjct: 45 VVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLF--DTEE 102 Query: 74 GVLELNASDDRGIDVVRNQI---------KHFAQKKLHLPPGKHKIVILDEADSMTAGAQ 124 +++++ ++ V I + Q + + +++ DE + Sbjct: 103 AMIQIDMTEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVF 162 Query: 125 QALRRTMELYS-----------NSTRFAFACNQSNKII------------------EPLQ 155 L + ++ +T N + +I + LQ Sbjct: 163 NILLQILDDGRLTDSHGRTVDFRNTVIILTSNLGSPLILEGLQKGWPYERIRDEVFKVLQ 222 Query: 156 SRCA---------ILRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDM 202 I+ + L+ E + + + + + + + A D Sbjct: 223 QHFRPEFLNRLDEIVVFRPLTKEQIRQIVEIQLSYLRARLAEKRISLELTEAAKDF 278 >1QVR-A nrPDB Length = 854 Score = 41.3 bits (95), Expect = 6e-04, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 70/202 (34%), Gaps = 25/202 (12%) Query: 20 LSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAH---------ELLGRS 70 L ++G E I R+ QI + ++ G PG+GKT V LA L G+ Sbjct: 169 LDPVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKR 228 Query: 71 YADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTA--------G 122 + + + ++K Q+ + I+ +DE ++ Sbjct: 229 IVSLQMGSLLAGAKYRGEFEERLKAVIQEVVQSQG--EVILFIDELHTVVGAGKAEGAVD 286 Query: 123 AQQALRRTMELYSNSTRFAFACNQSNKI--IEPLQSRCAILRYSKLSDEDVLKRLLQIIK 180 A L+ + A ++ +I L+ R + + + E+ + L + + Sbjct: 287 AGNMLKPALARGELRLIGATTLDEYREIEKDPALERRFQPVYVDEPTVEETISILRGLKE 346 Query: 181 ----LEDVKYTNDGLEAIIFTA 198 V+ ++ + A + Sbjct: 347 KYEVHHGVRISDSAIIAAATLS 368 Score = 37.8 bits (86), Expect = 0.006, Method: Composition-based stats. Identities = 21/158 (13%), Positives = 47/158 (29%), Gaps = 31/158 (19%) Query: 23 IVGNKETIDRLQQIAKDGN---------MPHMIISGMPGIGKTTSVHCLAHELLGRSYAD 73 +VG E I + + + + G G+GKT LA L + Sbjct: 560 VVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLF--DTEE 617 Query: 74 GVLELNASDDRGIDVVRNQI---------KHFAQKKLHLPPGKHKIVILDEADSMTAGAQ 124 ++ ++ ++ V I + Q + + +++ DE + Sbjct: 618 AMIRIDMTEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVF 677 Query: 125 QALRRTMELYS-----------NSTRFAFACNQSNKII 151 L + ++ +T N + +I Sbjct: 678 NILLQILDDGRLTDSHGRTVDFRNTVIILTSNLGSPLI 715 >5VY8-A nrPDB Length = 908 Score = 41.3 bits (95), Expect = 6e-04, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 69/211 (32%), Gaps = 18/211 (8%) Query: 7 LQLPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHEL 66 + E+ R L ++G +E I ++ + + G PGIGKT + +A + Sbjct: 170 YAIDMTEQARQGKLDPVIGREEEIRSTIRVLARRIKSNPCLIGEPGIGKTAIIEGVAQRI 229 Query: 67 LGRSY-----ADGVLELN-ASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIV-ILDEADSM 119 + + L+ A+ G + + F + K IV +DE + Sbjct: 230 IDDDVPTILQGAKLFSLDLAALTAGAKYKGDFEERFKGVLKEIEESKTLIVLFIDEIHML 289 Query: 120 TA----GAQQALRRTMELYSNSTRFAFACNQSNKIIE---PLQSRCAILRYSKLSDEDVL 172 A L+ + A N+ I+E + R + ++ S + Sbjct: 290 MGNGKDDAANILKPALSRGQLKVIGATTNNEYRSIVEKDGAFERRFQKIEVAEPSVRQTV 349 Query: 173 KRLLQII----KLEDVKYTNDGLEAIIFTAE 199 L + V+ + L A+ Sbjct: 350 AILRGLQPKYEIHHGVRILDSALVTAAQLAK 380 Score = 30.1 bits (66), Expect = 1.5, Method: Composition-based stats. Identities = 35/227 (15%), Positives = 71/227 (31%), Gaps = 37/227 (16%) Query: 21 SDIVGNKETIDRLQQIAK--------DGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYA 72 S++VG + I + + + G+ G GKT +A L Sbjct: 578 SEVVGQMDAIKAVSNAVRLSRSGLANPRQPASFLFLGLSGSGKTELAKKVAGFLFNDE-- 635 Query: 73 DGVLELNASDDRGIDVVRNQI---------KHFAQKKLHLPPGKHKIVILDEADSMTAGA 123 D ++ ++ S+ V + L + +++ DE + Sbjct: 636 DMMIRVDCSELSEKYAVSKLLGTTAGYVGYDEGGFLTNQLQYKPYSVLLFDEVEKAHPDV 695 Query: 124 QQALRRTMELYSNSTRFAFACNQSNKIIEPLQSRCAILRYSKLSDEDVLKRLLQIIKLED 183 + + ++ + K I+ S C ++ S L E I + Sbjct: 696 LTVMLQMLDDGR-------ITSGQGKTID--CSNCIVIMTSNLGAE-------FINSQQG 739 Query: 184 VKYTNDGLEAIIFTAEGDMR-QAINNLQSTVAGHGLVNADNVFKIVD 229 K ++ R + +N + S V + L + + KIVD Sbjct: 740 SKIQESTKNLVMGAVRQHFRPEFLNRISSIVIFNKL-SRKAIHKIVD 785 >1IY1-A nrPDB Length = 254 Score = 41.3 bits (95), Expect = 6e-04, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 63/200 (31%), Gaps = 39/200 (19%) Query: 27 KETIDRLQQIAKDGNMPH-MIISGMPGIGKTTSVHCLAHELL-------GRSYADGVLEL 78 + + + +P +++ G PG+GKT +A E G + + + + Sbjct: 33 EFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGV 92 Query: 79 NASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTA--------------GAQ 124 A+ R + F K H P IV +DE D++ Sbjct: 93 GAARVRDL---------FETAKRHAPC----IVFIDEIDAVGRKRGSGVGGGNDEREQTL 139 Query: 125 QALRRTMELYSNSTRFAF--ACNQSNKIIEPLQSRCAILRYSKLSDEDVLKR--LLQIIK 180 L M+ + T A N+ + + L R + DV R +L+I Sbjct: 140 NQLLVEMDGFEKDTAIVVMAATNRPDILDPALLRPGRFDRQIAIDAPDVKGREQILRIHA 199 Query: 181 LEDVKYTNDGLEAIIFTAEG 200 + L + G Sbjct: 200 RGKPLAEDVDLALLAKRTPG 219 >6EF0-M nrPDB Length = 258 Score = 40.9 bits (94), Expect = 7e-04, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 60/179 (33%), Gaps = 38/179 (21%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDD------RGIDVVRNQIKHFAQ 98 ++ G PG GKT A L+L A G +VR+ FA Sbjct: 43 ALMYGPPGTGKTLLARACA-----AQTNATFLKLAAPQLVQMYIGEGAKLVRDA---FAL 94 Query: 99 KKLHLPPGKHKIVILDEADSM-------TAGAQQALRRTMELYSN---------STRFAF 142 K P I+ +DE D++ + ++RTM N + Sbjct: 95 AKEKAP----TIIFIDELDAIGTKRFDSEKSGDREVQRTMLELLNQLDGFSSDDRVKVLA 150 Query: 143 ACNQSNKIIEPLQSRCAI---LRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTA 198 A N+ + + L + + + L ED ++LQI + + + + + Sbjct: 151 ATNRVDVLDPALLRSGRLDRKIEF-PLPSEDSRAQILQIHSRKMTTDDDINWQELARST 208 >4I5O-A nrPDB Length = 363 Score = 40.9 bits (94), Expect = 7e-04, Method: Composition-based stats. Identities = 26/142 (18%), Positives = 45/142 (31%), Gaps = 31/142 (21%) Query: 21 SDIVGNKETIDRLQ----------------QIAKDGNMPHMIISGMPGIGKTTSVHCLAH 64 ++G ++ L + G ++++ G G GKT LA Sbjct: 15 DYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGK-SNILLIGPTGSGKTLLAETLAR 73 Query: 65 ELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGA- 123 L L + G DV K + + + IV +DE D ++ + Sbjct: 74 LLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSD 133 Query: 124 -------------QQALRRTME 132 QQAL + +E Sbjct: 134 NPSITRDVSGEGVQQALLKLIE 155 >2QBY-A nrPDB Length = 386 Score = 40.9 bits (94), Expect = 8e-04, Method: Composition-based stats. Identities = 39/245 (15%), Positives = 80/245 (32%), Gaps = 40/245 (16%) Query: 17 PQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYAD--- 73 P I + L + K N+ I G+ G GKT V + +L + Sbjct: 23 PHREDQIRKIASILAPLYREEKPNNI---FIYGLTGTGKTAVVKFVLSKLHKKFLGKFKH 79 Query: 74 -------------GVLELNASDDRGIDVVRNQIKHFAQK--KLHLPPGKHKIVILDEADS 118 + +L S D + I ++ K G +++LDE D+ Sbjct: 80 VYINTRQIDTPYRVLADLLESLDVKVPFTGLSIAELYRRLVKAVRDYGSQVVIVLDEIDA 139 Query: 119 MTAGAQQALRRTM-----ELYSNSTRFAFACNQS------NKIIEPLQSRCAILRYSKLS 167 + + E+ + F N + ++ S I+ + + Sbjct: 140 FVKKYNDDILYKLSRINSEVNKSKISFIGITNDVKFVDLLDPRVKSSLSEEEII-FPPYN 198 Query: 168 DEDVLKRLL---QIIKLEDVKYTNDGLE---AIIFTAEGDMRQAINNLQSTVAGHGLVNA 221 E++ L Q+ V ++ ++ A+ GD R+A++ L+ + + Sbjct: 199 AEELEDILTKRAQMAFKPGV-LPDNVIKLCAALAAREHGDARRALDLLRVSGEIAERMKD 257 Query: 222 DNVFK 226 V + Sbjct: 258 TKVKE 262 >6MDP-A nrPDB Length = 768 Score = 40.9 bits (94), Expect = 9e-04, Method: Composition-based stats. Identities = 43/240 (17%), Positives = 81/240 (33%), Gaps = 30/240 (12%) Query: 40 GNMPHMIISGMPGIGKTTSVHCLAHELLGRS--YADGVLELNASDDRGIDVVRNQIKHFA 97 ++ +++ G PG GKT + L R +G LN +R Sbjct: 275 KHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAE 334 Query: 98 QKKLHLP-PGKHKIVILDEADSMTAGAQ-------------QALRRTME--LYSNSTRFA 141 +++ L I+I DE D++ L ++ N+ Sbjct: 335 EEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVI 394 Query: 142 FACNQSNKIIEPLQSRCAILRYS---KLSDEDVLKRLLQIIK-----LEDVKYTNDGLEA 193 N+ + I E L R L L DE ++L I + + D E Sbjct: 395 GMTNRPDLIDEALL-RPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKEL 453 Query: 194 IIFT---AEGDMRQAINNLQSTVAGHGLVNADNVFKIVDSPHPLIVKKMLLASNLEDSIQ 250 + T + ++ + QST ++ + V ++ L V + ++LE+ I+ Sbjct: 454 AVETKNFSGAELEGLVRAAQSTAMNRHIIASTKVEVDMEKAESLQVTRGDFLASLENDIK 513 >6QI8-A nrPDB Length = 456 Score = 40.5 bits (93), Expect = 9e-04, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 63/177 (35%), Gaps = 24/177 (13%) Query: 77 ELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTMELYSN 136 E+ I+ V N K+ Q L PG ++ +DE + L R +E S Sbjct: 270 EITDKLRGEINKVVN--KYIDQGIAELVPG---VLFVDEVHMLDIECFTYLHRALES-SI 323 Query: 137 STRFAFACNQ-------------SNKIIEPLQSRCAILRYSKLSDEDVLKRLLQIIKLED 183 + FA N+ + I L R I+R + +++ + + + E Sbjct: 324 APIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMIIRTMLYTPQEMKQIIKIRAQTEG 383 Query: 184 VKYTNDGLEAIIFT-AEGDMRQAINNLQSTVAGHGLVNADNVFKIVDSPHPLIVKKM 239 + + + L + + +R ++ L + D++ + H + ++ Sbjct: 384 INISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKINGKDSI----EKEHVEEISEL 436 Score = 39.4 bits (90), Expect = 0.002, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 37/80 (46%), Gaps = 7/80 (8%) Query: 23 IVGNKETIDR---LQQIAKDGNM--PHMIISGMPGIGKTTSVHCLAHELLGRSYADGVL- 76 +VG + + + ++ K M ++++G PG GKT +A EL + ++ Sbjct: 39 LVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVG 98 Query: 77 -ELNASDDRGIDVVRNQIKH 95 E+ +++ + +V+ + Sbjct: 99 SEVYSTEIKKTEVLMENFRR 118 >5FM7-A nrPDB Length = 464 Score = 40.5 bits (93), Expect = 0.001, Method: Composition-based stats. Identities = 27/184 (14%), Positives = 57/184 (30%), Gaps = 28/184 (15%) Query: 94 KHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQ------- 146 K+ Q L PG ++ +DEA + L + +E A N+ Sbjct: 288 KYINQGVAELIPG---VLFIDEAHMLDIECFTYLNKALESPIAPI-VVLASNRGIATIRG 343 Query: 147 ------SNKIIEPLQSRCAILRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIF-TAE 199 ++ I R I+ +++ + + + E V+ T+ ++ + Sbjct: 344 ADDLKAAHGIPPDFLQRLLIIPTHPYEPDEIRRIVRIRAQTEGVQLTDAAVDRVAEHGVR 403 Query: 200 GDMRQAINNLQSTVAGHGLVNADNVFKIVDSPHPLIVKKMLLASNLEDSIQILRTDLWKK 259 +R + L + + VN + D + D+ + L Sbjct: 404 ISLRYCLQLL-APASILARVNGRTQVDVQDIAEAEEL--------FLDARRSA-NILTST 453 Query: 260 GYSS 263 G S Sbjct: 454 GESG 457 Score = 32.0 bits (71), Expect = 0.38, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 14/22 (63%) Query: 45 MIISGMPGIGKTTSVHCLAHEL 66 ++++G PG GKT ++ EL Sbjct: 69 VLLAGGPGTGKTALALAISQEL 90 >6EMW-E nrPDB Length = 181 Score = 40.1 bits (92), Expect = 0.001, Method: Composition-based stats. Identities = 26/165 (15%), Positives = 58/165 (35%), Gaps = 17/165 (10%) Query: 19 VLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADG---- 74 L ++G + I R+ ++ + ++ G PG+GKT LA ++ + Sbjct: 17 TLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDK 76 Query: 75 -VLELN-ASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTA--------GAQ 124 V+ L+ + G + + + + I+ +DE ++ A Sbjct: 77 RVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGNVILFIDELHTLVGAGGAEGAIDAS 136 Query: 125 QALRRTMELYSNSTRFAFACNQSNKIIE---PLQSRCAILRYSKL 166 L+ + A ++ K IE L+ R ++ + Sbjct: 137 NILKPALARGELQCIGATTLDEYRKNIEKDAALERRFQPVQVDEP 181 >4WW4-B nrPDB Length = 513 Score = 40.1 bits (92), Expect = 0.001, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 50/139 (35%), Gaps = 18/139 (12%) Query: 87 DVVRNQIKHFAQK-KLHLPPGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACN 145 D + ++ + ++ K + PG ++ +DE + + R +E A N Sbjct: 298 DQINTKVAEWKEEGKAEIVPG---VLFIDEVHMLDIECFSYINRALESDLAPI-VIMASN 353 Query: 146 Q------------SNKIIEPLQSRCAILRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEA 193 + + + R I+ + +++ + L + E+V T D L Sbjct: 354 RGVSRIRGTDYKSPHGLPLDFLDRVVIINTHPYTPDELRQILSIRAQEEEVDLTPDALAL 413 Query: 194 IIFT-AEGDMRQAINNLQS 211 + E +R A N + + Sbjct: 414 LTKIGQEAGLRYASNLITT 432 Score = 35.1 bits (79), Expect = 0.045, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 6/56 (10%) Query: 16 RPQVLSDIVGNKETIDRLQ---QIAKDGNM--PHMIISGMPGIGKTTSVHCLAHEL 66 RP +VG ++ ++ K G + ++I+G P GKT +A L Sbjct: 65 RPSS-QGLVGQEKARKAAAVVLEMIKQGKIAGRAVLIAGPPSTGKTAIAMGMAQSL 119 >2DHR-A nrPDB Length = 499 Score = 40.1 bits (92), Expect = 0.001, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 63/200 (31%), Gaps = 39/200 (19%) Query: 27 KETIDRLQQIAKDGNMPH-MIISGMPGIGKTTSVHCLAHELL-------GRSYADGVLEL 78 + + + +P +++ G PG+GKT +A E G + + + + Sbjct: 48 EFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGV 107 Query: 79 NASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTA--------------GAQ 124 A+ R + F K H P IV +DE D++ Sbjct: 108 GAARVRDL---------FETAKRHAPC----IVFIDEIDAVGRKRGSGVGGGNDEREQTL 154 Query: 125 QALRRTMELYSNSTRFAF--ACNQSNKIIEPLQSRCAILRYSKLSDEDVLKR--LLQIIK 180 L M+ + T A N+ + + L R + DV R +L+I Sbjct: 155 NQLLVEMDGFEKDTAIVVMAATNRPDILDPALLRPGRFDRQIAIDAPDVKGREQILRIHA 214 Query: 181 LEDVKYTNDGLEAIIFTAEG 200 + L + G Sbjct: 215 RGKPLAEDVDLALLAKRTPG 234 >4XGC-A nrPDB Length = 393 Score = 40.1 bits (92), Expect = 0.001, Method: Composition-based stats. Identities = 39/237 (16%), Positives = 81/237 (34%), Gaps = 41/237 (17%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGV-----LELNA--------------SDDRG 85 M +SG+PG GKT +V + L + + + LE+N G Sbjct: 63 MYVSGVPGTGKTATVTGVIRTLQRMAKQNELPAFEYLEINGMRLTEPRQAYVQIYKQLTG 122 Query: 86 IDVVRNQIKHFAQKKLHLPPGKH--KIVILDEADSMTAGAQQALRRTMELYSNSTRFAFA 143 V Q +K+ P + ++++DE D + Q + ++ + S Sbjct: 123 KTVSWEQAHALLEKRFTTPAPRRVTTVLLVDELDILCNRRQDVVYNLLDWPTKSAAKLVV 182 Query: 144 CNQSNKIIEP-------LQSRCAILR--YSKLSDEDVLKRLL------QIIKLEDVKYTN 188 +N + P + SR + R + S + + + + + K E V+ Sbjct: 183 VTIANTMDLPERLLMGKVTSRLGLTRLTFQPYSHKQLQEIVTARLGGSETFKGEAVQLVA 242 Query: 189 DGLEAIIFTAEGDMRQAINNLQSTVAGHGLVNADNVFKI-VDSPHPLIVKKMLLASN 244 + A+ GD R+A++ + V + V ++ + + Sbjct: 243 RKVAAV----SGDARRALDICRRATEIADTAAVKCVTMLHVQQALAEMIASAKVQAI 295 >5A5B-M nrPDB Length = 434 Score = 39.7 bits (91), Expect = 0.002, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 60/179 (33%), Gaps = 38/179 (21%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDD------RGIDVVRNQIKHFAQ 98 ++ G PG GKT A L+L A G +VR+ FA Sbjct: 218 ALMYGPPGTGKTLLARACA-----AQTNATFLKLAAPQLVQMYIGEGAKLVRDA---FAL 269 Query: 99 KKLHLPPGKHKIVILDEADSM-------TAGAQQALRRTMELYSN---------STRFAF 142 K P I+ +DE D++ + ++RTM N + Sbjct: 270 AKEKAP----TIIFIDELDAIGTKRFDSEKSGDREVQRTMLELLNQLDGFSSDDRVKVLA 325 Query: 143 ACNQSNKIIEPLQSRCAI---LRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTA 198 A N+ + + L + + + L ED ++LQI + + + + + Sbjct: 326 ATNRVDVLDPALLRSGRLDRKIEF-PLPSEDSRAQILQIHSRKMTTDDDINWQELARST 383 >2X8A-A nrPDB Length = 274 Score = 39.7 bits (91), Expect = 0.002, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 62/181 (34%), Gaps = 36/181 (19%) Query: 45 MIISGMPGIGKTTSVHCLAHE-------LLGRSYADGVLELNASDDRGIDVVRNQIKHFA 97 ++++G PG GKT +A+E + G + + +R + V F Sbjct: 47 VLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYV---GESERAVRQV------FQ 97 Query: 98 QKKLHLPPGKHKIVILDEADSM--------TAGAQQALRRTME----LYSNSTRFAFACN 145 + K P ++ DE D++ T + + + + + L + F A Sbjct: 98 RAKNSAPC----VIFFDEVDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAAT 153 Query: 146 QSNKIIEPLQSRCAIL---RYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDM 202 II+P R L + L +L+ I K + + GD+ Sbjct: 154 NRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTK-PPLDADVNLEAIAGDL 212 Query: 203 R 203 R Sbjct: 213 R 213 >2V1U-A nrPDB Length = 387 Score = 39.7 bits (91), Expect = 0.002, Method: Composition-based stats. Identities = 35/222 (15%), Positives = 67/222 (30%), Gaps = 40/222 (18%) Query: 27 KETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVL----ELNASD 82 + + L + + ++ G+ G GKT + L R+ + GVL +NA Sbjct: 29 RRLAEVLAPALRGEKPSNALLYGLTGTGKTAVARLVLRRLEARASSLGVLVKPIYVNARH 88 Query: 83 DRGIDVVRNQIKHFAQKKLHLPP------------------GKHKIVILDEADSMTA--G 122 V + I ++ G + I++LDE D + G Sbjct: 89 RETPYRVASAIAEAVGVRVPFTGLSVGEVYERLVKRLSRLRGIY-IIVLDEIDFLPKRPG 147 Query: 123 AQQALRRTMELYSNS-----TRFAFACNQ---SNKIIEPLQSRCAILR--YSKLSDEDVL 172 Q L R + N + ++S + + + + Sbjct: 148 GQDLLYRITRINQELGDRVWVSLVGITNSLGFVENLEPRVKSSLGEVELVFPPYTAPQLR 207 Query: 173 KRLLQIIKL--EDVKYTNDGL---EAIIFTAEGDMRQAINNL 209 L + D + A+ GD R+A++ L Sbjct: 208 DILETRAEEAFNPGVLDPDVVPLCAALAAREHGDARRALDLL 249 >4HSE-A nrPDB Length = 397 Score = 39.4 bits (90), Expect = 0.002, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 70/202 (34%), Gaps = 25/202 (12%) Query: 20 LSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAH---------ELLGRS 70 L ++G E I R+ QI + ++ G PG+GKT V LA L G+ Sbjct: 32 LDPVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKR 91 Query: 71 YADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTA--------G 122 + + + ++K Q+ + I+ +DE ++ Sbjct: 92 IVSLQMGSLLAGAKYRGEFEERLKAVIQEVVQSQG--EVILFIDELHTVVGAGKAEGAVD 149 Query: 123 AQQALRRTMELYSNSTRFAFACNQSNKI--IEPLQSRCAILRYSKLSDEDVLKRLLQIIK 180 A L+ + A ++ +I L+ R + + + E+ + L + + Sbjct: 150 AGNMLKPALARGELRLIGATTLDEYREIEKDPALERRFQPVYVDEPTVEETISILRGLKE 209 Query: 181 ----LEDVKYTNDGLEAIIFTA 198 V+ ++ + A + Sbjct: 210 KYEVHHGVRISDSAIIAAATLS 231 >6AMN-A nrPDB Length = 349 Score = 39.4 bits (90), Expect = 0.002, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 62/183 (33%), Gaps = 14/183 (7%) Query: 7 LQLPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHEL 66 + E+ R L ++G +E I ++ + + G PGIGKT + +A + Sbjct: 167 YAIDMTEQARQGKLDPVIGREEEIRSTIRVLARRIKSNPCLIGEPGIGKTAIIEGVAQRI 226 Query: 67 LGRSY-----ADGVLELN-ASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIV-ILDEADSM 119 + + L+ A+ G + + F + K IV +DE + Sbjct: 227 IDDDVPTILQGAKLFSLDLAALTAGAKYKGDFEERFKGVLKEIEESKTLIVLFIDEIHML 286 Query: 120 TA----GAQQALRRTMELYSNSTRFAFACNQSNKIIE---PLQSRCAILRYSKLSDEDVL 172 A L+ + A N+ I+E + R + ++ S + Sbjct: 287 MGNGKDDAANILKPALSRGQLKVIGATTNNEYRSIVEKDGAFERRFQKIEVAEPSVRQTV 346 Query: 173 KRL 175 L Sbjct: 347 AIL 349 >2P65-A nrPDB Length = 187 Score = 39.4 bits (90), Expect = 0.002, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 23/182 (12%) Query: 7 LQLPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLA--- 63 R L ++G I R QI + I+ G PG+GKT V LA Sbjct: 8 YSRDLTALARAGKLDPVIGRDTEIRRAIQILSRRTKNNPILLGDPGVGKTAIVEGLAIKI 67 Query: 64 ------HELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEAD 117 L GR L + + ++K ++ ++ +DE Sbjct: 68 VQGDVPDSLKGRKLVSLDLSSLIAGAKYRGDFEERLKSILKEVQDAEG--QVVMFIDEIH 125 Query: 118 SMTA---------GAQQALRRTMELYSNSTRFAFACNQSNKIIE---PLQSRCAILRYSK 165 ++ A L+ + A ++ + IE L+ R + + Sbjct: 126 TVVGAGAVAEGALDAGNILKPMLARGELRCIGATTVSEYRQFIEKDKALERRFQQILVEQ 185 Query: 166 LS 167 S Sbjct: 186 PS 187 >4XGU-A nrPDB Length = 424 Score = 39.4 bits (90), Expect = 0.002, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 18/88 (20%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSY----ADGVLELNAS-------DDRGIDVVR--N 91 ++++G PG GKT+ LA L R +LE+N+ + G V + + Sbjct: 175 ILLTGPPGTGKTSLCKGLAQHLSIRMNDKYSKSVMLEINSHSLFSKWFSESGKLVQKMFD 234 Query: 92 QIKHFAQKKLHLPPGKHKIVILDEADSM 119 QI A+ + + V++DE +S+ Sbjct: 235 QIDELAEDEKCMV-----FVLIDEVESL 257 >2NZJ-A nrPDB Length = 175 Score = 39.0 bits (89), Expect = 0.003, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 49/129 (37%), Gaps = 18/129 (13%) Query: 45 MIISGMPGIGKTTSVHCLA-------HELLGRSYADGVLELNASDDRGIDVVR---NQIK 94 +++ G PG+GKT+ A HE LG + L ++ D + V ++ Sbjct: 7 VVLLGDPGVGKTSLASLFAGKQERDLHEQLGEDVYERTLTVDGEDTTLVVVDTWEAEKLD 66 Query: 95 HFAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTMEL--YSNSTRFAFACNQSNKIIE 152 ++ L G +++ AD + + LR + ++ N+++ Sbjct: 67 KSWSQESCLQGGSAYVIVYSIADRGSFESASELRIQLRRTHQADHVPIILVGNKAD---- 122 Query: 153 PLQSRCAIL 161 +RC + Sbjct: 123 --LARCREV 129 >5BQ5-A nrPDB Length = 189 Score = 38.6 bits (88), Expect = 0.003, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 39/107 (36%), Gaps = 6/107 (5%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLP 104 ++ G PGIGKT + E + R Y + A D ++ +R + +K Sbjct: 42 ILFLGPPGIGKTHLAISIGMEAIARGYKTYFI--TAHDL--VNQLRRADQEGKLEKKLRV 97 Query: 105 PGKHKIVILDEADSMTAGAQQA--LRRTMELYSNSTRFAFACNQSNK 149 K ++I+DE + A L + + N+S Sbjct: 98 FVKPTVLIIDEMGYLKLDPNSAHYLFQVIARRYEHAPIILTSNKSFG 144 >1OFI-A nrPDB Length = 310 Score = 38.6 bits (88), Expect = 0.004, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 68/215 (31%), Gaps = 48/215 (22%) Query: 28 ETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAH---ELLGRSYADGVLELNASDDR 84 + + L+ N+ ++ G G+GKT LA + A E+ Sbjct: 39 QLQEPLRHEVTPKNI---LMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKE 95 Query: 85 GIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGA------------QQALRRTME 132 ++R+ + ++ IV +DE D + Q+ L +E Sbjct: 96 VDSIIRDLTDSAGGAIDAVE--QNGIVFIDEIDKICKKGEYSGADVSREGVQRDLLPLVE 153 Query: 133 LYSNSTRFAFACNQ--------------SNKIIEPLQSRCAI-LRYSKLSDEDVLKRLLQ 177 + ST+ + +I LQ R I + + LS D + L + Sbjct: 154 GSTVSTKHGMVKTDHILFIASGAFQVARPSDLIPELQGRLPIRVELTALSAADFERILTE 213 Query: 178 -------------IIKLEDVKYTNDGLEAIIFTAE 199 + ++ +T D ++ I A Sbjct: 214 PHASLTEQYKALMATEGVNIAFTTDAVKKIAEAAF 248 >6GEJ-U nrPDB Length = 471 Score = 38.2 bits (87), Expect = 0.005, Method: Composition-based stats. Identities = 30/177 (16%), Positives = 63/177 (35%), Gaps = 22/177 (12%) Query: 55 KTTSVHCLAHELLGRSYAD-GVLELNASDDRGI-----DVVRNQIKHFAQK-KLHLPPGK 107 KT HE+ + G L L D I D + ++ + ++ K + PG Sbjct: 233 KTVVHTVSLHEIDVINSRTQGFLALFTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPG- 291 Query: 108 HKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFA---------CNQ--SNKIIEPLQS 156 ++ +DE + + R +E N + + L Sbjct: 292 --VLFIDEVHMLDIECFSFINRALEDEFAPIVMMATNRGVSKTRGTNYKSPHGLPLDLLD 349 Query: 157 RCAILRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFT-AEGDMRQAINNLQST 212 R I+ +++++ L + E+V+ ++D L+ + T E +R + N + Sbjct: 350 RSIIITTKSYNEQEIKTILSIRAQEEEVELSSDALDLLTKTGVETSLRYSSNLISVA 406 Score = 28.6 bits (62), Expect = 3.9, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 16/38 (42%), Gaps = 2/38 (5%) Query: 29 TIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHEL 66 + +Q G ++++G P GKT ++ L Sbjct: 57 ILKMVQNGTIAGR--AVLVAGPPSTGKTALAMGVSQSL 92 >5X06-E nrPDB Length = 253 Score = 37.8 bits (86), Expect = 0.006, Method: Composition-based stats. Identities = 40/200 (20%), Positives = 72/200 (36%), Gaps = 32/200 (16%) Query: 26 NKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRG 85 N + LQ + + + ++ + G G++ +H EL R A G + L D R Sbjct: 47 NSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACAELSQRGDAVGYVPL---DKRT 103 Query: 86 --IDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGA------QQALRRTMELYSNS 137 + V + ++H + +V +D + + R +E S Sbjct: 104 WFVPEVLDGMEHLS------------LVCIDNIECIAGDELWEMAIFDLYNRILE--SGK 149 Query: 138 TRFAFACNQS----NKIIEPLQSRC---AILRYSKLSDEDVLKRLLQIIKLEDVKYTNDG 190 TR ++ N + L SR I + LSDED L+ L +L + D Sbjct: 150 TRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDV 209 Query: 191 LEAIIFTAEGDMRQAINNLQ 210 ++ + +MR L Sbjct: 210 GRFLLKRLDREMRTLFMTLD 229 >4Z8X-A nrPDB Length = 497 Score = 37.8 bits (86), Expect = 0.006, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 60/183 (32%), Gaps = 41/183 (22%) Query: 45 MIISGMPGIGKTTSVHCLAHE-------LLGRSYADGVLELNASDDRGIDVVRNQIKHFA 97 +++ G PG+GKT +A E + G + + + + A+ R + F Sbjct: 54 VLLYGEPGVGKTLLAKAIAGEAHVPFISVSGSDFVEMFVGVGAARVRDL---------FE 104 Query: 98 QKKLHLPPGKHKIVILDEADSM--------TAGAQQALRRTME---------LYSNSTRF 140 K H P ++ +DE D++ G +T+ S+ Sbjct: 105 TAKKHAPC----MIFIDEIDAVGRARGAIPVGGGHDEREQTLNQLLVEMDGFDTSDGIIV 160 Query: 141 AFACNQSNKIIEPLQS--RC-AILRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFT 197 A N+ + + L R + K + L + + + D LE + Sbjct: 161 IAATNRPDILDPALLRPGRFDRQIFIPKPDVRGRYEILKVHARNKKLAKDVD-LEFVARA 219 Query: 198 AEG 200 G Sbjct: 220 TPG 222 >3JCP-I nrPDB Length = 437 Score = 37.4 bits (85), Expect = 0.008, Method: Composition-based stats. Identities = 39/234 (16%), Positives = 73/234 (31%), Gaps = 44/234 (18%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLP 104 +I+ G PG GKT +A++ EL + QI A + Sbjct: 219 VILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAP-- 276 Query: 105 PGKHKIVILDEADSM-------TAGAQQALRRTMELYSNS---------TRFAFACNQSN 148 IV +DE D++ +G ++ ++RTM N + A N+ Sbjct: 277 ----SIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIE 332 Query: 149 KIIEPLQSRCAI---LRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQA 205 + L I + + K L I + + D Sbjct: 333 TLDPALIRPGRIDRKILFENPDLSTKKKILG--IHTSKMNLSEDV--------------- 375 Query: 206 INNLQSTVAGHGLVNADNVFKIVDSPHPLIVKKMLLASNLEDSIQILRTDLWKK 259 NL++ V ++ ++ + L +++ + ED Q + K Sbjct: 376 --NLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTAEDFKQAKERVMKNK 427 >1UM8-A nrPDB Length = 376 Score = 37.4 bits (85), Expect = 0.009, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 30/81 (37%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLP 104 +++ G G GKT LA L L + G DV + ++ Sbjct: 75 ILLIGPTGSGKTLMAQTLAKHLDIPIAISDATSLTEAGYVGEDVENILTRLLQASDWNVQ 134 Query: 105 PGKHKIVILDEADSMTAGAQQ 125 + IV +DE D ++ ++ Sbjct: 135 KAQKGIVFIDEIDKISRLSEN 155 >4M4W-J nrPDB Length = 317 Score = 37.0 bits (84), Expect = 0.010, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 31/66 (46%) Query: 27 KETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGI 86 + D L+ + G + + G G+GKT + +A+EL + Y+ ++ + Sbjct: 146 QHVTDFLKSYNETGKGKGLYLYGKFGVGKTFMLAAIANELAEKEYSSMIVYVPEFVRELK 205 Query: 87 DVVRNQ 92 + +++Q Sbjct: 206 NSLQDQ 211 >3JC7-2 nrPDB Length = 868 Score = 37.0 bits (84), Expect = 0.010, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 59/174 (33%), Gaps = 32/174 (18%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVR-NQI-KHFAQKKLH 102 +++ G PG K+ + + +A G AS VR + I K + + Sbjct: 539 VLLLGDPGTAKSQILKYVEKTAHRAVFATG---QGASAVGLTASVRKDPITKEWTLEGGA 595 Query: 103 LPPGKHKIVILDEADSMTAGAQQALRRTMELYSNS-------------TRFAFACNQSNK 149 L + ++DE D M + ++ ME S S A N + Sbjct: 596 LVLADKGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLQARCSIIAAANPNGG 655 Query: 150 -------------IIEPLQSRCAIL-RYSKLSDEDVLKRLLQIIKLEDVKYTND 189 + EP+ SR IL L DE+ +RL + V+ + Sbjct: 656 RYNSTLPLAQNVSLTEPILSRFDILCVVRDLVDEEADERLATFVVDSHVRSHPE 709 >6FVU-I nrPDB Length = 384 Score = 37.0 bits (84), Expect = 0.010, Method: Composition-based stats. Identities = 39/234 (16%), Positives = 73/234 (31%), Gaps = 44/234 (18%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLP 104 +I+ G PG GKT +A++ EL + QI A + Sbjct: 166 VILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAP-- 223 Query: 105 PGKHKIVILDEADSM-------TAGAQQALRRTMELYSNS---------TRFAFACNQSN 148 IV +DE D++ +G ++ ++RTM N + A N+ Sbjct: 224 ----SIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIE 279 Query: 149 KIIEPLQSRCAI---LRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQA 205 + L I + + K L I + + D Sbjct: 280 TLDPALIRPGRIDRKILFENPDLSTKKKILG--IHTSKMNLSEDV--------------- 322 Query: 206 INNLQSTVAGHGLVNADNVFKIVDSPHPLIVKKMLLASNLEDSIQILRTDLWKK 259 NL++ V ++ ++ + L +++ + ED Q + K Sbjct: 323 --NLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTAEDFKQAKERVMKNK 374 >2D4E-A nrPDB Length = 515 Score = 37.0 bits (84), Expect = 0.011, Method: Composition-based stats. Identities = 44/239 (18%), Positives = 81/239 (33%), Gaps = 26/239 (10%) Query: 28 ETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGID 87 T +L +I K+ ++P + + + G G+ +AH L+ +L L + G Sbjct: 203 FTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLV------PLLTLTGETETGKI 256 Query: 88 VVRNQIKHFAQKKLHLPPGKHKIVILDEAD---SMTAGAQQALRRTMELYSNSTRFAFAC 144 V+RN H + L +V D AD ++ A Q E + S+R Sbjct: 257 VMRNAADHLKRLSPELGGKSPALVFAD-ADLERALDAVVFQIFSFNGERCTASSRLLVEE 315 Query: 145 NQSNKIIEPLQSRCAILRYSKLSD-----------EDVLKRL--LQIIKLEDVKYTNDGL 191 + + R +R D E + + L ++ K E + G Sbjct: 316 KIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGE 375 Query: 192 EAIIFTAEGDMRQAINNLQSTVAGHG--LVNADNVFKIVDSPHP-LIVKKMLLASNLED 247 A D+ + L + G + + +F V P ++ L +N Sbjct: 376 RAKTSFRGEDLSRGNYLLPTVFVGENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTK 434 >6EF1-I nrPDB Length = 271 Score = 36.3 bits (82), Expect = 0.016, Method: Composition-based stats. Identities = 39/234 (16%), Positives = 73/234 (31%), Gaps = 44/234 (18%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLP 104 +I+ G PG GKT +A++ EL + QI A + Sbjct: 53 VILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAP-- 110 Query: 105 PGKHKIVILDEADSM-------TAGAQQALRRTMELYSNS---------TRFAFACNQSN 148 IV +DE D++ +G ++ ++RTM N + A N+ Sbjct: 111 ----SIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIE 166 Query: 149 KIIEPLQSRCAI---LRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQA 205 + L I + + K L I + + D Sbjct: 167 TLDPALIRPGRIDRKILFENPDLSTKKKILG--IHTSKMNLSEDV--------------- 209 Query: 206 INNLQSTVAGHGLVNADNVFKIVDSPHPLIVKKMLLASNLEDSIQILRTDLWKK 259 NL++ V ++ ++ + L +++ + ED Q + K Sbjct: 210 --NLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTAEDFKQAKERVMKNK 261 >1FNN-A nrPDB Length = 389 Score = 36.3 bits (82), Expect = 0.019, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 68/208 (32%), Gaps = 42/208 (20%) Query: 41 NMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQI------- 93 + P + G PG GKT ++ L EL + +N R + +I Sbjct: 43 HYPRATLLGRPGTGKTVTLRKLW-ELYKDKTTARFVYINGFIYRNFTAIIGEIARSLNIP 101 Query: 94 --------KHFAQKKLHLPPGK--HKIVILDEADSMTAGAQQALRRTMELYSN--STRFA 141 F + + + ++LD+A ++ R + + R A Sbjct: 102 FPRRGLSRDEFLALLVEHLRERDLYMFLVLDDAFNLAPDILSTFIRLGQEADKLGAFRIA 161 Query: 142 FAC--------NQSNKIIEPLQSRCAILRYSKLSDEDVLKRLLQIIK---LEDVKYTNDG 190 N + + + ++R+S + + + LL K E Y+ D Sbjct: 162 LVIVGHNDAVLNNLDPSTRGIMGKY-VIRFSPYTKDQIFDILLDRAKAGLAEG-SYSEDI 219 Query: 191 LEAII---------FTAEGDMRQAINNL 209 L+ I T GD R AI+ L Sbjct: 220 LQMIADITGAQTPLDTNRGDARLAIDIL 247 >2QZ4-A nrPDB Length = 262 Score = 35.9 bits (81), Expect = 0.023, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 39/118 (33%), Gaps = 24/118 (20%) Query: 19 VLSDIVGNKETIDRLQQIAKDGNMPH------------MIISGMPGIGKTTSVHCLAHEL 66 D+ G E +++ P ++ G PG GKT +A E Sbjct: 4 SFKDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEA 63 Query: 67 LGRSYADG---VLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTA 121 A +E+ G VR+ K A+ + IV +DE D++ Sbjct: 64 QVPFLAMAGAEFVEVIGGL--GAARVRSLFKE-ARARAPC------IVYIDEIDAVGK 112 >3UPU-A nrPDB Length = 459 Score = 35.9 bits (81), Expect = 0.027, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 51/157 (32%), Gaps = 27/157 (17%) Query: 19 VLSDIV-GNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLE 77 D+ G K + + + K+ H+ I+G G G TT + L+ +L Sbjct: 22 TFDDLTEGQKNAFNIVMKAIKEKK-HHVTINGPAGTGATTLTKFIIEALISTGETGIILA 80 Query: 78 LNASDDRGI--------------DVVRNQIKH-----FAQKKLHLPPGKHKIVILDEADS 118 + I + N + + F QK++ K +++I DE Sbjct: 81 APTHAAKKILSKLSGKEASTIHSILKINPVTYEENVLFEQKEVPDL-AKCRVLICDEVSM 139 Query: 119 MTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQ 155 + L T+ + NK I P+ Sbjct: 140 YDRKLFKILLSTI---PPWCTIIGIGD--NKQIRPVD 171 >3MD0-A nrPDB Length = 355 Score = 35.5 bits (80), Expect = 0.033, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%) Query: 38 KDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFA 97 GN + I+G+PG+GK+T++ L L+ R + VL ++ S R + A Sbjct: 75 DSGNAHRVGITGVPGVGKSTAIEALGMHLIERGHRVAVLAVDPSSTRTGGSILGDKTRMA 134 Query: 98 QKKLH 102 + +H Sbjct: 135 RLAVH 139 >1ZAK-A nrPDB Length = 222 Score = 35.1 bits (79), Expect = 0.037, Method: Composition-based stats. Identities = 38/214 (17%), Positives = 80/214 (37%), Gaps = 27/214 (12%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVL---ELNASDDRGID----------VVRN 91 ++ISG P GK T + + + G L E+ A + G V Sbjct: 8 VMISGAPASGKGTQCELIKTKYQLAHISAGDLLRAEIAAGSENGKRAKEFMEKGQLVPDE 67 Query: 92 QIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFA------FACN 145 + + +++L P + +LD + +Q T+E+ ++ Sbjct: 68 IVVNMVKERLRQPDAQENGWLLDGYPR--SYSQAMALETLEIRPDTFILLDVPDELLVER 125 Query: 146 QSNKIIEPLQSRCAILRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQA 205 + ++P+ + L+YS +E++ RL Q T + ++ + T ++ Sbjct: 126 VVGRRLDPVTGKIYHLKYSPPENEEIASRLTQ-----RFDDTEEKVKLRLETYYQNIESL 180 Query: 206 INNLQS-TVAGHGLVNADNVFKIVDSPHPLIVKK 238 ++ ++ V G D VF +D I++K Sbjct: 181 LSTYENIIVKVQGDATVDAVFAKIDELLGSILEK 214 >1Z47-A nrPDB Length = 355 Score = 35.1 bits (79), Expect = 0.039, Method: Composition-based stats. Identities = 36/195 (18%), Positives = 69/195 (35%), Gaps = 27/195 (13%) Query: 3 KTLSLQLPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCL 62 +++++ VEK P G ++ + ++G M ++ G G GKTT + + Sbjct: 11 GSMTIEFVGVEKIYP-------GGARSVRGVSFQIREGEMVGLL--GPSGSGKTTILRLI 61 Query: 63 A---HELLGRSYADGVLELN-ASDDRGIDVVRNQIKHFAQKKLHLPPG---KHKIVILDE 115 A G + G + R + +V F ++ + K V DE Sbjct: 62 AGLERPTKGDVWIGGKRVTDLPPQKRNVGLVFQNYALFQHMTVYDNVSFGLREKRVPKDE 121 Query: 116 ADSMTAGAQQALRRTM--ELYSNSTRFAFACNQSNK--IIEPLQSRCAILRYSKL---SD 168 D+ L R M E Y+N + Q + + L R +L + + D Sbjct: 122 MDARVRE----LLRFMRLESYANRFPHELSGGQQQRVALARALAPRPQVLLFDEPFAAID 177 Query: 169 EDVLKRLLQIIKLED 183 + + L ++ Sbjct: 178 TQIRRELRTFVRQVH 192 >3GEH-A nrPDB Length = 462 Score = 35.1 bits (79), Expect = 0.044, Method: Composition-based stats. Identities = 31/215 (14%), Positives = 71/215 (33%), Gaps = 32/215 (14%) Query: 49 GMPGIGKTTSVHC--------------LAHELLGRSYADGVLELNASDDRGIDVVRNQIK 94 G P +GK++ ++ +++ G + + D GI +Q++ Sbjct: 231 GRPNVGKSSLLNAWSQSDRAIVTDLPGTTRDVVESQLVVGGIPVQVLDTAGIRETSDQVE 290 Query: 95 HFAQKKLHLPPGKHKIVI--LDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIE 152 ++ +V+ +D A T G Q+ + N+ + + + Sbjct: 291 KIGVERSRQAANTADLVLLTIDAATGWTTGDQEIYEQV-----KHRPLILVMNKIDLVEK 345 Query: 153 PLQSRCAILRYSKLSDEDVLKRL-LQIIKLEDVKYTNDGLEAIIFTAE---GDMRQAINN 208 L I E++ + + + + + + I+ T + DM AIN Sbjct: 346 QL-----ITSLEYP--ENITQIVHTAAAQKQGIDSLETAILEIVQTGKVQAADMDLAINQ 398 Query: 209 LQSTVAGHGLVNADNVFKIVDSPHPLIVKKMLLAS 243 Q+ ++ + V + PL + L Sbjct: 399 RQAAALTQAKMSLEQVQATITQQLPLDFWTIDLRG 433 >3TK1-A nrPDB Length = 330 Score = 34.7 bits (78), Expect = 0.048, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%) Query: 38 KDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFA 97 G H+ I+G+PG+GK+TS+ L L+ + + VL ++ S R + A Sbjct: 52 DAGRAMHVGITGVPGVGKSTSIEALGMHLIEQGHRVAVLAVDPSSVRSGGSILGDKTRMA 111 Query: 98 QKKLH 102 + +H Sbjct: 112 RLAVH 116 >3NXS-A nrPDB Length = 329 Score = 34.7 bits (78), Expect = 0.054, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 33/65 (50%) Query: 38 KDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFA 97 + G+ H+ I+G+PG+GK+T++ L L+ + VL ++ S R + A Sbjct: 53 EAGSAMHVGITGVPGVGKSTTIEALGMHLIEAGHRVAVLAVDPSSTRTGGSILGDKTRMA 112 Query: 98 QKKLH 102 + +H Sbjct: 113 RLAVH 117 >4XRP-A nrPDB Length = 312 Score = 34.3 bits (77), Expect = 0.069, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 48/162 (29%), Gaps = 12/162 (7%) Query: 41 NMPH----MIISGMPGIGKTTSVHCLAH--ELLGRSYADGVLELNASDDRGIDVVRNQIK 94 N H +I+ G PG GK+T + R D + D +I Sbjct: 6 NTHHFPKLLILVGAPGSGKSTFARYFIRTEDNWVRVNRDDFRLMQFGDSLMSPFYEERIT 65 Query: 95 HFAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPL 154 + + VI+D +S Q + E S + ++++ Sbjct: 66 KMVEASVIALLKNRTNVIIDATNSSLRSLQDMVHTYTEYADISFKVFDL--PVEELVKRC 123 Query: 155 QSRCAILRYSKLSDEDVLK---RLLQIIKLEDVKYTNDGLEA 193 RC + + K +L + D K L+ Sbjct: 124 DKRCEQ-TGKFIPKSAIEKHVTQLQYTKEKFDFKPIPRALKE 164 >4XGC-D nrPDB Length = 459 Score = 34.0 bits (76), Expect = 0.086, Method: Composition-based stats. Identities = 47/274 (17%), Positives = 91/274 (33%), Gaps = 53/274 (19%) Query: 33 LQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHEL-----LGRSY----ADGVLELNASDD 83 LQ+ A+ G +++ G G GKTT ++ + +L G + DG L + Sbjct: 40 LQRTAEMGESNSLLLLGPRGSGKTTLINSVLADLLPNKSFGENTLIVHLDGNLHTDDRVA 99 Query: 84 RGIDVVRNQIKHFAQKKLHLP--------------PGKHK---IVILDEADSMTAGAQQA 126 V+ Q+++ A K+ GKH I IL+E D A Q Sbjct: 100 LKSITVQMQLENAADGKVFGSFAENLAFLLQCLKAGGKHSKSVIFILEEFDLFCAHHNQT 159 Query: 127 LRRTMELYSNS-----TRFAFAC--NQSNKIIEPLQSRCA---ILRYSKL----SDEDVL 172 L + S S C + + + ++SR + + + L D+ Sbjct: 160 LLYNLFDVSQSAQAPICVLGVTCRLDVIELLEKRVKSRFSHRQVFLFPSLRRFEDYVDLC 219 Query: 173 KRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAG-------------HGLV 219 + LL + + + + + G + + N+ G ++ Sbjct: 220 RDLLSLPTGNSLLLAAEKIYNLQNIQSGALYFSRNHFDPGEYGFSPRLRDAWNKQICKVL 279 Query: 220 NADNVFKIVDSPHPLIVKKMLLASNLEDSIQILR 253 + + H + + L + L + LR Sbjct: 280 ATQQARSTLQALHDFDISEAYLKNFLFRLVAHLR 313 >2I3B-A nrPDB Length = 189 Score = 34.0 bits (76), Expect = 0.086, Method: Composition-based stats. Identities = 9/18 (50%), Positives = 14/18 (77%) Query: 43 PHMIISGMPGIGKTTSVH 60 H+ ++G PG+GKTT +H Sbjct: 2 RHVFLTGPPGVGKTTLIH 19 >2YVU-A nrPDB Length = 186 Score = 34.0 bits (76), Expect = 0.091, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 45/111 (40%), Gaps = 5/111 (4%) Query: 47 ISGMPGIGKTTSVHCLAHELLGRSYADGVLELN---ASDDRGIDVVRNQ-IKHFAQ-KKL 101 ++G+PG GKTT LA L Y VL+ + + G R + ++H + + Sbjct: 18 LTGLPGSGKTTIATRLADLLQKEGYRVEVLDGDWARTTVSEGAGFTREERLRHLKRIAWI 77 Query: 102 HLPPGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIE 152 ++ ++++ S A+ +RR +E + ++I Sbjct: 78 ARLLARNGVIVICSFVSPYKQARNMVRRIVEEEGIPFLEIYVKASLEEVIR 128 >1G8P-A nrPDB Length = 350 Score = 34.0 bits (76), Expect = 0.10, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Query: 13 EKYRPQ-VLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLA 63 K RP S IVG ++ L A D + +++ G G GK+T+V LA Sbjct: 15 AKTRPVFPFSAIVGQEDMKLALLLTAVDPGIGGVLVFGDRGTGKSTAVRALA 66 >1V43-A nrPDB Length = 372 Score = 33.6 bits (75), Expect = 0.12, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 6/76 (7%) Query: 18 QVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLA---HELLGRSY-AD 73 + L+ GN +++L KDG +++ G G GKTT++ +A GR Y D Sbjct: 15 ENLTKRFGNFTAVNKLNLTIKDGEF--LVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGD 72 Query: 74 GVLELNASDDRGIDVV 89 + DR I +V Sbjct: 73 RDVTYLPPKDRNISMV 88 >4Y0A-A nrPDB Length = 179 Score = 33.6 bits (75), Expect = 0.13, Method: Composition-based stats. Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%) Query: 42 MPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLEL 78 +P++ + G G GKTT LA ELLGR + D E+ Sbjct: 8 LPNIYLVGPMGAGKTTVGRHLA-ELLGREFLDSDHEI 43 >5JZV-A nrPDB Length = 206 Score = 33.2 bits (74), Expect = 0.14, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 17/22 (77%) Query: 42 MPHMIISGMPGIGKTTSVHCLA 63 +P+++++G PG+GKTT LA Sbjct: 37 LPNILLTGTPGVGKTTLGKELA 58 >6IF2-B nrPDB Length = 186 Score = 33.2 bits (74), Expect = 0.14, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 41/106 (38%), Gaps = 10/106 (9%) Query: 41 NMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGV--------LELNASDDRGIDVVRNQ 92 ++ ++I G G+GK++ + A SY + +E+N + Sbjct: 13 HLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAG 72 Query: 93 IKHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTMELYSNST 138 ++ F G H ++++ D +A + ++R + + + Sbjct: 73 LERFRTITSTYYRGTHGVIVV--YDVTSAESFVNVKRWLHEINQNC 116 >3IIK-A nrPDB Length = 180 Score = 33.2 bits (74), Expect = 0.15, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 17/22 (77%) Query: 42 MPHMIISGMPGIGKTTSVHCLA 63 +P+++++G PG+GKTT LA Sbjct: 11 LPNILLTGTPGVGKTTLGKELA 32 >1Y63-A nrPDB Length = 184 Score = 33.2 bits (74), Expect = 0.16, Method: Composition-based stats. Identities = 11/24 (45%), Positives = 16/24 (66%) Query: 45 MIISGMPGIGKTTSVHCLAHELLG 68 ++I+G PG GKT+ +A EL G Sbjct: 13 ILITGTPGTGKTSMAEMIAAELDG 36 >2WWW-A nrPDB Length = 349 Score = 32.8 bits (73), Expect = 0.20, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 3/73 (4%) Query: 16 RPQVLSDIVGNKETIDRLQQIAKDGNMPHMI---ISGMPGIGKTTSVHCLAHELLGRSYA 72 R + L+ ++ K + +Q + P +SG PG GK+T + L R + Sbjct: 45 RKKELAQVLLQKVLLYHREQEQSNKGKPLAFRVGLSGPPGAGKSTFIEYFGKMLTERGHK 104 Query: 73 DGVLELNASDDRG 85 VL ++ S Sbjct: 105 LSVLAVDPSSCTS 117 >5UJ7-C nrPDB Length = 436 Score = 32.4 bits (72), Expect = 0.26, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 42/129 (32%), Gaps = 27/129 (20%) Query: 27 KETIDRLQQIAKDGNMPHMIISGMPGIGKTTSV-HCLAHELLGRSYADGVLE--LNASDD 83 K + L++ A G ++I G G GKT + H L + ++ VL+ LN Sbjct: 45 KHLSELLKRTALHGESNSVLIIGPRGSGKTMLINHALKELMEIEEVSENVLQVHLNGLLQ 104 Query: 84 RGIDVVRNQIKH---------------FAQKKLHLPPGKHK---------IVILDEADSM 119 + +I FA+ L K I ILDE D Sbjct: 105 INDKIALKEITRQLNLENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLF 164 Query: 120 TAGAQQALR 128 Q L Sbjct: 165 AHHKNQTLL 173 >2BDT-A nrPDB Length = 189 Score = 32.4 bits (72), Expect = 0.27, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 47/120 (39%), Gaps = 19/120 (15%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRG-------IDVVRNQIKHFA 97 II+G G+GK+T+ LA +L +Y +G + +N G +++ K+ Sbjct: 5 YIITGPAGVGKSTTCKRLAAQLDNSAYIEGDI-INHMVVGGYRPPWESDELLALTWKNIT 63 Query: 98 QKKLHLPPGKHKIV-----ILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIE 152 ++ ++ +V DEA+++ Q + RF +++ Sbjct: 64 DLTVNFLLAQNDVVLDYIAFPDEAEALAQTVQAKVDDV------EIRFIILWTNREELLR 117 >3J15-B nrPDB Length = 593 Score = 32.0 bits (71), Expect = 0.33, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 14/86 (16%) Query: 17 PQVLSD-IVG----NKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSY 71 P+ L + V N + RL I KDG + ++ G G GKTT+V LA +L+ Sbjct: 76 PEQLDEDCVHRYGVNAFVLYRLP-IVKDGMVVGIV--GPNGTGKTTAVKILAGQLIP--- 129 Query: 72 ADGVLELNASDDRGIDVVR-NQIKHF 96 + E N S D I R N+++++ Sbjct: 130 --NLCEDNDSWDNVIRAFRGNELQNY 153 >5L3S-B nrPDB Length = 296 Score = 32.0 bits (71), Expect = 0.35, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 62/150 (41%), Gaps = 28/150 (18%) Query: 18 QVLSDIVGNKETIDRLQQIAKDGNMPH-MIISGMPGIGKTTSVHCLAHELLGRSYADGVL 76 + +++I+ + D +++I G P +I G+ G+GKTT++ + + L + + Sbjct: 76 KSITEILTKNQKTDLIEKIRSSGKKPFVIIFFGVNGVGKTTTIAKVVNMLKKNNLST--- 132 Query: 77 ELNASDDRGIDVVRNQIKHFAQK-KLHLPPGKH--------------------KIVILDE 115 + A+ D + Q+ + A K ++ L GK+ +V++D Sbjct: 133 -IIAASDTFRAAAQEQLAYHASKLEVQLIRGKYGADPASVAFDAISFAKSRNIDVVLIDT 191 Query: 116 ADSMTAGAQ--QALRRTMELYSNSTRFAFA 143 A M + + L++ + + R Sbjct: 192 AGRMHIDSDLVEELKKVLRIAKPDFRILIL 221 >4CVN-A nrPDB Length = 191 Score = 32.0 bits (71), Expect = 0.37, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 4/58 (6%) Query: 47 ISGMPGIGKTTSVHCLAHELLGR--SYADGVLELNAS--DDRGIDVVRNQIKHFAQKK 100 I+G PG+GKTT LA +L + D LE D ++V +++ +F +K+ Sbjct: 16 ITGTPGVGKTTIAKLLAEKLGYEYVNLRDFALEKGCGREVDGEVEVEIDELAYFVEKE 73 >2YYZ-A nrPDB Length = 359 Score = 31.6 bits (70), Expect = 0.40, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 5/64 (7%) Query: 16 RPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLA---HELLGRSYA 72 R L G + +D + KDG ++ G G GKTT++ LA G Y Sbjct: 5 RVVNLKKYFGKVKAVDGVSFEVKDGEFVALL--GPSGCGKTTTLLMLAGIYKPTSGEIYF 62 Query: 73 DGVL 76 D VL Sbjct: 63 DDVL 66 >6J5T-G nrPDB Length = 852 Score = 31.6 bits (70), Expect = 0.42, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 40/129 (31%), Gaps = 21/129 (16%) Query: 22 DIVGNKETIDRLQQIAKDGNMPHMI---ISGMPGIGKTTSVHCLAHELLGRSYADGVLEL 78 +VG + ++++ N ++ GM G+GKTT +A E+ + E Sbjct: 159 QVVGLEGDKRKIKEWLFRSNDSQLLIMAFVGMGGLGKTT----IAQEVFNDKEIEHRFER 214 Query: 79 NASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTMELYSNST 138 QI ++ + D+ L R ++ Y Sbjct: 215 RIWVSVSQTFTEEQIMRS--------------ILRNLGDASVGDDIGTLLRKIQQYLLGK 260 Query: 139 RFAFACNQS 147 R+ + Sbjct: 261 RYLIVMDDV 269 >5C1S-A nrPDB Length = 391 Score = 31.3 bits (69), Expect = 0.56, Method: Composition-based stats. Identities = 31/187 (16%), Positives = 67/187 (35%), Gaps = 27/187 (14%) Query: 16 RPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCL--AHELLGRSYAD 73 RP + ++ R + +++ G G+GKTT C +H+ G + Sbjct: 39 RP---AHMIRPAHKSLRTRSQIIGKKEIRLLVVGSSGVGKTTLCDCFFESHQSQGEETRE 95 Query: 74 GVLELNASDDRGIDVVRNQIKHFAQKKLHL-----PPGKHKIVI---LDEADSMTAGAQQ 125 ++++ D +R I A ++ G I++ + E S T Sbjct: 96 KHVQIDN------DFIRISISDIAGQQSFYACDNPYDGYDAILVMYDITELKSFTDLKTM 149 Query: 126 ALRRTMELYSNSTRFAFACNQSNKIIEPLQSRC--------AILRYSKLSDEDVLKRLLQ 177 L + T+ N+ ++ I+ + +R + ++ ++S +D +LL Sbjct: 150 WLPDIFLYCNIDTQIIIIGNKKDQEIDRIITRKEAEQFAQDRLCQFYEISTKDDSCQLLF 209 Query: 178 IIKLEDV 184 D Sbjct: 210 DCISRDF 216 >4R7Y-A nrPDB Length = 613 Score = 31.3 bits (69), Expect = 0.60, Method: Composition-based stats. Identities = 32/214 (14%), Positives = 66/214 (30%), Gaps = 40/214 (18%) Query: 28 ETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLA----HELLGRSYADGVLELNASDD 83 +L + H+++ G PG+ K+ + +A + + L A+ Sbjct: 321 GVSRKLPDGTRLRGDIHVLLVGDPGVAKSQILRYVANLAPRAIYTSGKSSSAAGLTAAAV 380 Query: 84 RGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTMELYSNS------ 137 R + + L L G + ++ DE D M+ + + +E + S Sbjct: 381 R-DEFTGGWVLEAG--ALVLADGGYALI--DELDKMSDRDRSVIHEALEQQTISISKAGI 435 Query: 138 -------TRFAFACNQSNK-------------IIEPLQSRCAIL--RYSKLS---DEDVL 172 T A N + L SR ++ + D +V Sbjct: 436 TATLNARTTVIAAANPKQGRFNRMKNPFEQIDLPPTLLSRFDLIFVLIDEPDDKIDSEVA 495 Query: 173 KRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQAI 206 + +L++ + E I+ R+ I Sbjct: 496 RHILRVRRGESEVVAPKIPHEILRKYIAYARKNI 529 >3GP8-A nrPDB Length = 574 Score = 31.3 bits (69), Expect = 0.60, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 10/85 (11%) Query: 45 MIISGMPGIGKTTSVHCLAH--ELLG------RSYADGVLELNASDDRGIDVVRNQIKHF 96 ++++G PG GK+T+ +A E LG L R V + + Sbjct: 207 VVLTGGPGTGKSTTTKAVADLAESLGLEVGLCAPTGKAARRLGEVTGRTASTVHRLLGYG 266 Query: 97 AQ--KKLHLPPGKHKIVILDEADSM 119 Q + HL P + ++I+DE M Sbjct: 267 PQGFRHNHLEPAPYDLLIVDEVSMM 291 >3F9V-A nrPDB Length = 595 Score = 31.3 bits (69), Expect = 0.63, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 87/252 (34%), Gaps = 34/252 (13%) Query: 10 PWVEKYRPQVLS-DIVGNKETIDRL--------QQIAKDGNMP---HMIISGMPGIGKTT 57 PW+ ++ I G+ E + L ++ +D + H++I G PG K+ Sbjct: 283 PWIRDRIISSIAPSIYGHWELKEALALALFGGVPKVLEDTRIRGDIHILIIGDPGTAKSQ 342 Query: 58 SVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQ-IKHFAQKKLHLPPGKHKIVILDEA 116 + ++ Y G A VVR + + + L I ++DE Sbjct: 343 MLQFISRVAPRAVYTTGKGSTAAGLTAA--VVREKGTGEYYLEAGALVLADGGIAVIDEI 400 Query: 117 DSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSRCAILRYSKLSDEDVLKRLL 176 D M + A+ ME + S I+ L +R A++ + + Sbjct: 401 DKMRDEDRVAIHEAMEQQTVSIA-------KAGIVAKLNARAAVIAAGNP---KFGRYIS 450 Query: 177 QIIKLEDVKYTNDGLEA-----IIFTAEGDMRQAINN----LQSTVAGHGLVNADNVFKI 227 + +++ L I+ G+ + + N + S + +++ D + K Sbjct: 451 ERPVSDNINLPPTILSRFDLIFILKDQPGEQDRELANYILDVHSGKSTKNIIDIDTLRKY 510 Query: 228 VDSPHPLIVKKM 239 + + K+ Sbjct: 511 IAYARKYVTPKI 522 >5M7N-A nrPDB Length = 454 Score = 31.3 bits (69), Expect = 0.64, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 44/116 (37%), Gaps = 8/116 (6%) Query: 22 DIVGNKETIDRLQQIAK--DGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELN 79 ++VG +++L+Q + ++I+G G GK + + +N Sbjct: 142 ELVGTSLAMNQLRQTIERVAPTNSRIMITGPSGAGKELVARAI--HAQSSRANGPFVTVN 199 Query: 80 AS----DDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTM 131 A+ + I++ ++ +K L I+ LDE M Q + R + Sbjct: 200 AATITPERMEIELFGTEMDGGERKVGALEEAHGGILYLDEVADMPRETQNKILRVL 255 >5GQ1-A nrPDB Length = 214 Score = 30.9 bits (68), Expect = 0.74, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 47/134 (35%), Gaps = 15/134 (11%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLP 104 +II G PG GK+ + +A + + + D D + Q+ P Sbjct: 10 LIIRGSPGTGKSLATGIIARAIADKY--HSSVYSLPPDPDHFDGYKQQVVTVMDDLCQNP 67 Query: 105 PGKHKIVI------LDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSRC 158 GK + +D M + A+ + S +++F A + II P S Sbjct: 68 DGKDMSLFCQMVSTVDFIPPMASLAEAGV-------SFTSKFVIASTNATNIIVPTVSDS 120 Query: 159 AILRYSKLSDEDVL 172 +R D D+ Sbjct: 121 DAIRRRFYMDCDIE 134 >3CM0-A nrPDB Length = 186 Score = 30.9 bits (68), Expect = 0.80, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 16/33 (48%) Query: 44 HMIISGMPGIGKTTSVHCLAHELLGRSYADGVL 76 +I G PG GK T LA EL + + G + Sbjct: 6 AVIFLGPPGAGKGTQASRLAQELGFKKLSTGDI 38 >4FDG-B nrPDB Length = 692 Score = 30.9 bits (68), Expect = 0.85, Method: Composition-based stats. Identities = 35/220 (15%), Positives = 77/220 (35%), Gaps = 25/220 (11%) Query: 33 LQQIAKDGNMP---HMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVV 89 + ++ +D + H++I G PG K+ + ++ Y G A VV Sbjct: 327 VPKVLEDTRIRGDIHILIIGDPGTAKSQMLQFISRVAPRAVYTTGKGSTAAGLTAA--VV 384 Query: 90 RNQ-IKHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSN 148 R + + + L I ++DE D M + A+ ME + S Sbjct: 385 REKGTGEYYLEAGALVLADGGIAVIDEIDKMRDEDRVAIHEAMEQQTVSIA-------KA 437 Query: 149 KIIEPLQSRCAILRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEA-----IIFTAEGDMR 203 I+ L +R A++ + + + +++ L I+ G+ Sbjct: 438 GIVAKLNARAAVIAAGNP---KFGRYISERPVSDNINLPPTILSRFDLIFILKDQPGEQD 494 Query: 204 QAINN----LQSTVAGHGLVNADNVFKIVDSPHPLIVKKM 239 + + N + S + +++ D + K + + K+ Sbjct: 495 RELANYILDVHSGKSTKNIIDIDTLRKYIAYARKYVTPKI 534 >4F4J-A nrPDB Length = 202 Score = 30.9 bits (68), Expect = 0.87, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 57/190 (30%), Gaps = 27/190 (14%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVL---------ELNASDDR--GIDVVRNQI 93 ++ISG G GK+T + L E S+ V E+N D +D ++ I Sbjct: 20 IVISGPSGTGKSTLLKKLFAE-YPDSFGFSVPSTTRTPRAGEVNGKDYNFVSVDEFKSMI 78 Query: 94 KHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEP 153 K+ + G + + ++ + + S + N I P Sbjct: 79 KNNEFIEWAQFSGNYYGSTVASVKQVSKSGKTCILDIDMQGVKSVKAIPELNARFLFIAP 138 Query: 154 LQSRCAILRYSKLSDEDVLKRLLQIIKLEDVKYTND---GLEAIIFTAEGDMRQAINNLQ 210 S ED+ KRL + + + G + I N Sbjct: 139 ------------PSVEDLKKRLEGRGTETEESINKRLSAAQAELAYAETGAHDKVIVNDD 186 Query: 211 STVAGHGLVN 220 A L + Sbjct: 187 LDKAYKELKD 196 >5UJ7-A nrPDB Length = 391 Score = 30.9 bits (68), Expect = 0.89, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 9/63 (14%) Query: 27 KETIDRLQQIAKDGNMPH----MIISGMPGIGKTTSVHCLAHELLGRSYADGV-----LE 77 ++ + + + H M ISG+PG GKT +VH + L + A+ V +E Sbjct: 38 EQEFQDIYNFVESKLLDHTGGCMYISGVPGTGKTATVHEVIRCLQQAAQANDVPPFQYIE 97 Query: 78 LNA 80 +N Sbjct: 98 VNG 100 >4YER-A nrPDB Length = 328 Score = 30.5 bits (67), Expect = 1.00, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 2/46 (4%) Query: 18 QVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLA 63 + L G+ E + + K G + G G GKTT++H L Sbjct: 9 ENLVKKFGDFEAVKGVSFSVKKGEI--FAFLGPNGAGKTTTIHMLT 52 >2XZL-A nrPDB Length = 802 Score = 30.5 bits (67), Expect = 1.0, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 27/62 (43%), Gaps = 5/62 (8%) Query: 5 LSLQLPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAH 64 +S +P +++ + + N + + + + P +I G PG GKT + + + Sbjct: 343 ISFDVPLPKEFSIPNFAQL--NSSQSNAVSHVLQR---PLSLIQGPPGTGKTVTSATIVY 397 Query: 65 EL 66 L Sbjct: 398 HL 399 >4EUN-A nrPDB Length = 200 Score = 30.5 bits (67), Expect = 1.1, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%) Query: 43 PHMIISGMPGIGKTTSVHCLAHEL---LGRSYADGVLELNASDDRGIDVVRN 91 H+++ G+ G GKTT H +A E + A E A+ RGI + Sbjct: 30 RHVVVMGVSGSGKTTIAHGVADETGLEFAEADAFHSPENIATMQRGIPLTDE 81 >4BS1-B nrPDB Length = 173 Score = 30.5 bits (67), Expect = 1.1, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 46/117 (39%), Gaps = 12/117 (10%) Query: 27 KETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGI 86 KE ++++++I P ++I+G G+GK + H+L RS + + LN + Sbjct: 11 KEILEKIKKI-SCAECP-VLITGESGVGKEVVARLI-HKLSDRS-KEPFVALNVASIPRD 66 Query: 87 DVVRNQIKH--------FAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTMELYS 135 + + K+ + LDE ++ AQ L R +E Sbjct: 67 IFEAELFGYEKGAFTGAVSSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGK 123 >3N70-A nrPDB Length = 145 Score = 30.5 bits (67), Expect = 1.1, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 43/130 (33%), Gaps = 19/130 (14%) Query: 22 DIVGNKETIDRLQQIAKDGNMP--HMIISGMPGIGKTTSVHCLAHELLGRSYADGVL--E 77 +++G E I++ ++ + + + + G PG G+ T L GR+ + E Sbjct: 2 ELIGRSEWINQYRRRLQQLSETDIAVWLYGAPGTGRMTGARYLHQ--FGRNAQGEFVYRE 59 Query: 78 LNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTMELYSNS 137 L + Q + + ++L + +T Q L + Sbjct: 60 LTP-------------DNAPQLNDFIALAQGGTLVLSHPEHLTREQQYHLVQLQSQEHRP 106 Query: 138 TRFAFACNQS 147 R + S Sbjct: 107 FRLIGIGDTS 116 >3BE4-A nrPDB Length = 217 Score = 30.5 bits (67), Expect = 1.1, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 51/148 (34%), Gaps = 18/148 (12%) Query: 41 NMPHMIISGMPGIGKTTSVHCLAHE--LLGRSYADGVLELNASDDRGIDVVRNQIK--HF 96 ++I+ G PG GK T + E L S D + E + + ++ I+ +F Sbjct: 4 KKHNLILIGAPGSGKGTQCEFIKKEYGLAHLSTGDMLREAIKNGTKIGLEAKSIIESGNF 63 Query: 97 AQKKLHLPPGKHKI--------VILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSN 148 ++ L K K +LD A+ + E+ + T + + Sbjct: 64 VGDEIVLGLVKEKFDLGVCVNGFVLDGFPRTIPQAEGLAKILSEIGDSLTSVIYFEIDDS 123 Query: 149 KIIEPLQSRC------AILRYSKLSDED 170 +IIE + RC I + Sbjct: 124 EIIERISGRCTHPASGRIYHVKYNPPKQ 151 >5G3Y-A nrPDB Length = 226 Score = 30.1 bits (66), Expect = 1.2, Method: Composition-based stats. Identities = 10/36 (27%), Positives = 15/36 (41%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNA 80 +I+ G PG GK T + E + G + A Sbjct: 3 LILLGPPGAGKGTQAEKIVEEYGIPHISTGDMFRAA 38 >5EG1-A nrPDB Length = 580 Score = 30.1 bits (66), Expect = 1.2, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 31/85 (36%), Gaps = 7/85 (8%) Query: 47 ISGMPGIGKTTSVHCLA---HELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHL 103 ++G G GK+T V ++ G Y + + N SD+ + + I + Q Sbjct: 376 LTGPSGSGKSTLVKIISGYYKNYFGDIYLNDISLRNISDE----DLNDAIYYLTQDDYIF 431 Query: 104 PPGKHKIVILDEADSMTAGAQQALR 128 + L D+ + L+ Sbjct: 432 MDTLRFNLRLANYDASENEIFKVLK 456 >4LZZ-A nrPDB Length = 268 Score = 30.1 bits (66), Expect = 1.4, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 62/181 (34%), Gaps = 30/181 (16%) Query: 27 KETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGI 86 KE ++++++I P ++I+G G+GK + H+L RS + + LN + Sbjct: 28 KEILEKIKKI-SCAECP-VLITGESGVGKEVVARLI-HKLSDRS-KEPFVALNVASIPRD 83 Query: 87 DVVRNQIKH--------FAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTMELYS--- 135 + + K+ + LDE ++ AQ L R +E Sbjct: 84 IFEAELFGYEKGAFTGAVSSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFYR 143 Query: 136 --------NSTRFAFACNQ-------SNKIIEPLQSRCAILRYSKLSDEDVLKRLLQIIK 180 + R A N+ K E L R ++ + + ++ + Sbjct: 144 LGGRKEIEVNVRILAATNRNIKELVKEGKFREDLYYRLGVIEIEIPPLRERKEDIIPLAN 203 Query: 181 L 181 Sbjct: 204 H 204 >4JYC-A nrPDB Length = 337 Score = 30.1 bits (66), Expect = 1.5, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 63/177 (35%), Gaps = 12/177 (6%) Query: 47 ISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPG 106 I+G+PG+GK+T++ L L + VL ++ S R + A+ + Sbjct: 60 ITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPSSTRTGGSILGDKTRMARLAID---- 115 Query: 107 KHKIVILDEADSMTAGAQQALRRTMELY-SNSTRFAFACN----QSNKIIEPLQSRCAIL 161 ++ + + G R TM L + QS + L +L Sbjct: 116 RNAFIRPSPSSGTLGGVAAKTRETMLLCEAAGFDVILVETVGVGQSETAVADLTDFFLVL 175 Query: 162 RYSKLSDE--DVLKRLLQIIKLEDVKYTNDGL-EAIIFTAEGDMRQAINNLQSTVAG 215 DE + K + ++ + V +DG E A + R A++ L A Sbjct: 176 MLPGAGDELQGIKKGIFELADMIAVNKADDGDGERRASAAASEYRAALHILTPPSAT 232 >1EGV-G nrPDB Length = 173 Score = 29.7 bits (65), Expect = 1.6, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 30/84 (35%) Query: 164 SKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAGHGLVNADN 223 L D + L + +D++ T + L A+ R + A V D Sbjct: 59 KTLDDFTLENVLSNKVTAQDMRITPETLRLQASIAKDAGRDRLAMNFERAAELTAVPDDR 118 Query: 224 VFKIVDSPHPLIVKKMLLASNLED 247 + +I ++ P K L + +D Sbjct: 119 ILEIYNALRPYRSTKEELLAIADD 142 >5V8F-A nrPDB Length = 913 Score = 29.7 bits (65), Expect = 1.6, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 42/113 (37%), Gaps = 22/113 (19%) Query: 35 QIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGV-----LELNASDDRGIDVV 89 + + + ++G PG+GKT +V + ELL S + +E+N Sbjct: 465 SAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDC 524 Query: 90 RNQIKH-----------------FAQKKLHLPPGKHKIVILDEADSMTAGAQQ 125 + + F K++ K +V+LDE D+M +Q Sbjct: 525 YETLWNKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKSQD 577 >1NY5-A nrPDB Length = 387 Score = 29.7 bits (65), Expect = 1.7, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 46/117 (39%), Gaps = 12/117 (10%) Query: 27 KETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGI 86 KE ++++++I P ++I+G G+GK + H+L RS + + LN + Sbjct: 147 KEILEKIKKI-SCAECP-VLITGESGVGKEVVARLI-HKLSDRS-KEPFVALNVASIPRD 202 Query: 87 DVVRNQIKH--------FAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTMELYS 135 + + K+ + LDE ++ AQ L R +E Sbjct: 203 IFEAELFGYEKGAFTGAVSSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGK 259 >5DXT-A nrPDB Length = 962 Score = 29.7 bits (65), Expect = 1.8, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 52/153 (33%), Gaps = 18/153 (11%) Query: 66 LLGRSYADGVLELNASDDRGIDVVRNQIKHFA-QKKLHLPPGKHKIVILDEA--DSMTAG 122 L R D L N + R+ + Q+K L +H V + E + + Sbjct: 407 LSNRLARDNELRENDKEQLKAISTRDPLSEITEQEKDFLWSHRHYCVTIPEILPKLLLSV 466 Query: 123 AQQALRRTMELY----------SNSTRFAFACNQSNKIIEPLQSRCAILRYSKLSDEDVL 172 + ++Y CN + ++ RC L+D+ + Sbjct: 467 KWNSRDEVAQMYCLVKDWPPIKPEQAMELLDCNYPDPMVRGFAVRCLE---KYLTDDKLS 523 Query: 173 KRLLQIIKLEDVK--YTNDGLEAIIFTAEGDMR 203 + L+Q++++ + N + ++ A + R Sbjct: 524 QYLIQLVQVLKYEQYLDNLLVRFLLKKALTNQR 556 >2GA8-A nrPDB Length = 359 Score = 29.7 bits (65), Expect = 1.8, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 33/81 (40%), Gaps = 6/81 (7%) Query: 27 KETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYAD-----GVLELNAS 81 + + L +D +I+ G PG GK+T L + + + V+E+N Sbjct: 9 DDVLQLLDNRIEDNYRVCVILVGSPGSGKSTIAEELCQIINEKYHTFLSEHPNVIEVNDR 68 Query: 82 DDRGIDVVRNQIKHFAQKKLH 102 +++V + +K K+ Sbjct: 69 LKPMVNLV-DSLKTLQPNKVA 88 >3SR0-A nrPDB Length = 206 Score = 29.7 bits (65), Expect = 1.9, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 11/21 (52%) Query: 45 MIISGMPGIGKTTSVHCLAHE 65 ++ G PG GK T LA E Sbjct: 3 LVFLGPPGAGKGTQAKRLAKE 23 >5WWP-B nrPDB Length = 600 Score = 29.7 bits (65), Expect = 1.9, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 17/41 (41%) Query: 23 IVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLA 63 I +E + K G ++ + G PG GK+ LA Sbjct: 258 ITVPEEFASHVANFQKSGYSKYVTVQGPPGTGKSHFAIGLA 298 >4L4U-A nrPDB Length = 447 Score = 29.3 bits (64), Expect = 2.0, Method: Composition-based stats. Identities = 27/181 (14%), Positives = 57/181 (31%), Gaps = 30/181 (16%) Query: 27 KETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGI 86 KE ++++++I P ++I+G G+GK + + + LN + Sbjct: 155 KEILEKIKKI-SCAECP-VLITGESGVGKEVVARLIHKS--SDRSKEPFVALNVASIPRD 210 Query: 87 DVVRNQIKH--------FAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTMELYS--- 135 + + K+ + LDE ++ AQ L R +E Sbjct: 211 IFEAELFGYEKGAFTGAVSSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFYR 270 Query: 136 --------NSTRFAFACNQ-------SNKIIEPLQSRCAILRYSKLSDEDVLKRLLQIIK 180 + R A N+ K E L R ++ + + ++ + Sbjct: 271 LGGRKEIEVNVRILAATNRNIKELVKEGKFREDLYYRLGVIEIEIPPLRERKEDIIPLAN 330 Query: 181 L 181 Sbjct: 331 H 331 >3H1T-A nrPDB Length = 590 Score = 29.3 bits (64), Expect = 2.0, Method: Composition-based stats. Identities = 11/73 (15%), Positives = 25/73 (34%), Gaps = 11/73 (15%) Query: 74 GVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTMEL 133 + + ASD+R + + + F ++I+DE +A R +E Sbjct: 280 AIYQSIASDERRPGLYKEFPQDF-----------FDLIIIDECHRGSARDNSNWREILEY 328 Query: 134 YSNSTRFAFACNQ 146 + + + Sbjct: 329 FEPAFQIGMTATP 341 >1U0J-A nrPDB Length = 267 Score = 29.3 bits (64), Expect = 2.1, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 12/29 (41%) Query: 38 KDGNMPHMIISGMPGIGKTTSVHCLAHEL 66 K G + + G GKT +AH + Sbjct: 100 KFGKRNTIWLFGPATTGKTNIAEAIAHTV 128 >3CRQ-A nrPDB Length = 323 Score = 29.3 bits (64), Expect = 2.1, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 19/65 (29%), Gaps = 1/65 (1%) Query: 43 PHMIISGMPGIGKTTSVHCLAHELLGR-SYADGVLELNASDDRGIDVVRNQIKHFAQKKL 101 P + + G GKT LA L D L D R + + + + Sbjct: 6 PAIFLMGPTAAGKTDLAMALADALPCELISVDSALIYRGMDIGTAKPSRELLARYPHRLI 65 Query: 102 HLPPG 106 + Sbjct: 66 DIRDP 70 >4UJC-AB nrPDB Length = 627 Score = 29.3 bits (64), Expect = 2.1, Method: Composition-based stats. Identities = 35/221 (15%), Positives = 72/221 (32%), Gaps = 45/221 (20%) Query: 21 SDIVGNKETIDRLQQIAKDGNMPH-------------MIISGMPGIGKTTSVHCLAHELL 67 D + D+ ++ + + H + + G GKT + L H + Sbjct: 4 DDRTKEERAYDKAKRRIEKRRLEHSKNVNTEKLRAPVICVLGHVDTGKTKILDKLRHTHV 63 Query: 68 GRSYADGVLELNASDDRGIDVVRNQ---IKHFAQKKLHLP-------PGKHKI------- 110 A G+ + + + ++ + Q IK+F ++ + +P PG Sbjct: 64 QDGEAGGITQQIGATNVPLEAINEQTKMIKNFDRENVRIPGMLIIDTPGHESFSNLRNRG 123 Query: 111 -----VILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSRCAILRYSK 165 + + D M Q + L S F A N+ +++ + K Sbjct: 124 SSLCDIAILVVDIMHGLEPQTIESINLLKSKKCPFIVALNKIDRL----------YDWKK 173 Query: 166 LSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQAI 206 D DV L + K ++ I+ A+ + A+ Sbjct: 174 SPDSDVAATLKKQKKNTKDEFEERAKAIIVEFAQQGLNAAL 214 >1Z6G-A nrPDB Length = 218 Score = 29.3 bits (64), Expect = 2.3, Method: Composition-based stats. Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 9/170 (5%) Query: 37 AKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHF 96 N+ ++I G G+GK T + L +E Y ++ + + + + + ++ Sbjct: 18 GSMNNIYPLVICGPSGVGKGTLIKKLLNEFPNYFY----FSVSCTTRKKREKEKEGVDYY 73 Query: 97 AQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQS 156 K L E D+ L+ + + N + + +S Sbjct: 74 FIDKTIFEDKLKNEDFL-EYDNYANNFYGTLKSEYDKAKEQNKICLFEMNINGVKQLKKS 132 Query: 157 ----RCAILRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDM 202 + S + +L RLL + + I E ++ Sbjct: 133 THIKNALYIFIKPPSTDVLLSRLLTRNTENQEQIQKRMEQLNIELHEANL 182 >1P4S-A nrPDB Length = 181 Score = 29.3 bits (64), Expect = 2.3, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 18/40 (45%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDR 84 +++ G PG GK T LA +L + G L ++ Sbjct: 3 VLLLGPPGAGKGTQAVKLAEKLGIPQISTGELFRRNIEEG 42 >4OI0-A nrPDB Length = 431 Score = 29.3 bits (64), Expect = 2.4, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 19/43 (44%) Query: 37 AKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELN 79 + P +++ G +GKTT L + + + +EL+ Sbjct: 112 SNKAKGPRLLLVGPTDVGKTTVSRILCNYSVRQGRTPIFVELD 154 >5BK4-5 nrPDB Length = 775 Score = 29.3 bits (64), Expect = 2.5, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 41/128 (32%), Gaps = 3/128 (2%) Query: 28 ETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGID 87 + L + ++++ G PG K+ + + Y G A + Sbjct: 395 GSKKILPDGMRLRGDINVLLLGDPGTAKSQLLKFVEKVSPIAVYTSGKGSSAAGLTASVQ 454 Query: 88 VVRNQIKH-FAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQ 146 R+ + F + + +V +DE D M + A+ ME + S A Sbjct: 455 --RDPMTREFYLEGGAMVLADGGVVCIDEFDKMRDEDRVAIHEAMEQQTISIAKAGITTV 512 Query: 147 SNKIIEPL 154 N L Sbjct: 513 LNSRTSVL 520 >1G29-1 nrPDB Length = 372 Score = 29.0 bits (63), Expect = 2.7, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%) Query: 22 DIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLA 63 + G + + KDG MI+ G G GKTT++ +A Sbjct: 11 KVFGEVTAVREMSLEVKDGEF--MILLGPSGCGKTTTLRMIA 50 >2PJZ-A nrPDB Length = 263 Score = 29.0 bits (63), Expect = 2.8, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 32/95 (33%), Gaps = 4/95 (4%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLP 104 +II G G GKTT L + G G + +N + R I + + Sbjct: 33 VIILGPNGSGKTT----LLRAISGLLPYSGNIFINGMEVRKIRNYIRYSTNLPEAYEIGV 88 Query: 105 PGKHKIVILDEADSMTAGAQQALRRTMELYSNSTR 139 + + +E + + + ++L R Sbjct: 89 TVNDIVYLYEELKGLDRDLFLEMLKALKLGEEILR 123 >4B3F-X nrPDB Length = 646 Score = 29.0 bits (63), Expect = 3.1, Method: Composition-based stats. Identities = 10/18 (55%), Positives = 12/18 (66%) Query: 45 MIISGMPGIGKTTSVHCL 62 II G PG GKTT+V + Sbjct: 208 AIIHGPPGTGKTTTVVEI 225 >1YE8-A nrPDB Length = 178 Score = 29.0 bits (63), Expect = 3.2, Method: Composition-based stats. Identities = 30/172 (17%), Positives = 58/172 (33%), Gaps = 38/172 (22%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKH--------- 95 +II+G PG+GKTT V + L R+ E+ + + R Sbjct: 3 IIITGEPGVGKTTLVKKIVERLGKRAIGFWTEEVRDPETKKRTGFRIITTEGKKKIFSSK 62 Query: 96 -FAQKKLHLPPG------------------------KHKIVILDEADSM---TAGAQQAL 127 F KKL G + K++I+DE M + + + Sbjct: 63 FFTSKKLVGSYGVNVQYFEELAIPILERAYREAKKDRRKVIIIDEIGKMELFSKKFRDLV 122 Query: 128 RRTMELYSNSTRFAFACNQSNKIIEPLQSRCAILRYSKLSDEDVLKRLLQII 179 R+ M + + + +++ ++ + L+ E+ L I+ Sbjct: 123 RQIMHDPNVNVVATIPIRDVHPLVKEIRRLPGAVLIE-LTPENRDVILEDIL 173 >2V3C-C nrPDB Length = 432 Score = 29.0 bits (63), Expect = 3.2, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 87/252 (34%), Gaps = 24/252 (9%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLP 104 +++ G+ G GKTT+ LA + R ++ + D Q+K A +K+H+P Sbjct: 102 ILLVGIQGSGKTTTAAKLARYIQKRGLKPALI----AADTYRPAAYEQLKQLA-EKIHVP 156 Query: 105 PGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSRCAILRYS 164 + DE T ++ ME + + +K + L ++ Sbjct: 157 ------IYGDETR--TKSPVDIVKEGMEKFKKADVLIIDTAGRHKEEKGLLEEMKQIKEI 208 Query: 165 KLSDEDVLKRLLQIIKLEDVKYTN------DGLEAIIFTAEGDMRQAINNLQSTVAGHGL 218 DE +L I + ++ + I+ +G + L + Sbjct: 209 TNPDEIILVIDGTIGQQAGIQAKAFKEAVGEIGSIIVTKLDGSAKGG-GALSAVAETKAP 267 Query: 219 VNADNVFKIVDSPHPLI----VKKMLLASNLEDSIQILRTDLWKKGYSSIDIVTTSFRVT 274 + + + +D P + ++L +LE ++ + +K SID + Sbjct: 268 IKFIGIGEGIDDLEPFDPKKFISRLLGMGDLESLLEKAEDMVDEKTEESIDAIMRGKFTL 327 Query: 275 KNLAQVKESVRL 286 L E++ Sbjct: 328 NELMTQLEAIEN 339 >2IYT-A nrPDB Length = 184 Score = 28.6 bits (62), Expect = 3.6, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 24/61 (39%), Gaps = 1/61 (1%) Query: 43 PHMIISGMPGIGKTTSVHCLAHEL-LGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKL 101 P ++ G+PG GK+T LA L +G D +E + + F + + Sbjct: 3 PKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRIEE 62 Query: 102 H 102 Sbjct: 63 D 63 >1VPL-A nrPDB Length = 256 Score = 28.6 bits (62), Expect = 3.6, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Query: 18 QVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLA 63 + L +G KE + + ++G + +I G G GKTT++ ++ Sbjct: 19 KDLRKRIGKKEILKGISFEIEEGEIFGLI--GPNGAGKTTTLRIIS 62 >1NI3-A nrPDB Length = 392 Score = 28.6 bits (62), Expect = 4.0, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 73/210 (34%), Gaps = 13/210 (6%) Query: 26 NKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRG 85 +E + Q + GN I GMP +GK+T + +LG ++ ++ Sbjct: 6 QQEVVKV--QWGRPGNNLKTGIVGMPNVGKSTFFRAITKSVLGNPANYPYATIDP-EEAK 62 Query: 86 IDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACN 145 + V + + + + D A +T GA + + + R A + Sbjct: 63 VAVPDERFDWLCEAYKPKSRVPAFLTVFDIA-GLTKGASTGVG-LGNAFLSHVR---AVD 117 Query: 146 QSNKIIEPLQSRCAILRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQA 205 +++ I+ D D ++ L I+ +K + + + R A Sbjct: 118 AIYQVVRAFDD-AEIIHVEG--DVDPIRDLSIIVDELLIKDAEFVEKHLEGLRKITSRGA 174 Query: 206 INNLQSTVAGHGLVNADNVFK-IVDSPHPL 234 N L+ + V++ + ++ P+ Sbjct: 175 -NTLEMKAKKEEQAIIEKVYQYLTETKQPI 203 >1IM2-A nrPDB Length = 444 Score = 28.2 bits (61), Expect = 4.5, Method: Composition-based stats. Identities = 9/37 (24%), Positives = 16/37 (43%), Gaps = 3/37 (8%) Query: 28 ETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAH 64 + + L+ N+ ++ G G+GKT LA Sbjct: 39 QLQEPLRHEVTPKNI---LMIGPTGVGKTEIARRLAK 72 >3R8F-A nrPDB Length = 324 Score = 28.2 bits (61), Expect = 4.7, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 45/116 (38%), Gaps = 12/116 (10%) Query: 14 KYRPQVLSDIVGNKETIDRLQQIAK-DGNMPHMII-SGMPGIGKTTSVHCLAHELLGRSY 71 KY + GN+ + +++ + G++ + I G G GKT + +E R Y Sbjct: 7 KYTLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAKKRGY 66 Query: 72 ADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHK---IVILDEADSMTAGAQ 124 D + ++H + ++ +K +++LD+ ++ + Sbjct: 67 RVIY-------SSADDFAQAMVEHLKKGTINEFRNMYKSVDLLLLDDVQFLSGKER 115 >1IHU-A nrPDB Length = 589 Score = 28.2 bits (61), Expect = 4.7, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 3/46 (6%) Query: 21 SDIVGNKETIDRLQQIAKD--GNMPHMI-ISGMPGIGKTTSVHCLA 63 + + + I L + D N +I + G G+GKTT +A Sbjct: 303 DEYLQQRPDIPSLSALVDDIARNEHGLIMLMGKGGVGKTTMAAAIA 348 >4U00-A nrPDB Length = 244 Score = 28.2 bits (61), Expect = 5.0, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 36/90 (40%), Gaps = 4/90 (4%) Query: 16 RPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGV 75 R + L G + + G ++I G G GK+T + + L + V Sbjct: 6 RIRNLHKWFGPLHVLKGIHLEVAPGE--KLVIIGPSGSGKSTLIRTINR-LEDFQEGEVV 62 Query: 76 LE-LNASDDRGIDVVRNQIKHFAQKKLHLP 104 ++ L+ DDR + +R ++ Q+ P Sbjct: 63 VDGLSVKDDRALREIRREVGMVFQQFNLFP 92 >5JXR-A nrPDB Length = 723 Score = 28.2 bits (61), Expect = 5.2, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 27/66 (40%), Gaps = 1/66 (1%) Query: 83 DRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAF 142 D DV + ++K HL + +I+DEA + + +L + + ++++ R Sbjct: 203 DENFDVCITSYEMILREKAHLKKFAWEYIIIDEAHRI-KNEESSLAQVIRMFNSRNRLLI 261 Query: 143 ACNQSN 148 Sbjct: 262 TGTPLQ 267 >3R20-A nrPDB Length = 233 Score = 28.2 bits (61), Expect = 5.4, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 14/33 (42%) Query: 49 GMPGIGKTTSVHCLAHELLGRSYADGVLELNAS 81 G G GK++ LA L R G + A+ Sbjct: 16 GPAGTGKSSVSRGLARALGARYLDTGAMYRIAT 48 >3A4L-A nrPDB Length = 260 Score = 28.2 bits (61), Expect = 5.4, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 54/116 (46%), Gaps = 5/116 (4%) Query: 40 GNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQK 99 G++ +I++G+PG+GK+T LA +L ++ D ++ + V + + + F +K Sbjct: 2 GDIMLIILTGLPGVGKSTFSKNLAK-ILSKNNIDVIVLGSDLIRESFPVWKEKYEEFIKK 60 Query: 100 ---KLHLPPGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIE 152 +L K+ VI+D+ + ++ L + Y+ + + + +I Sbjct: 61 STYRLIDSALKNYWVIVDDTNYYN-SMRRDLINIAKKYNKNYAIIYLKASLDVLIR 115 >4G1U-C nrPDB Length = 266 Score = 28.2 bits (61), Expect = 5.6, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 42/108 (38%), Gaps = 2/108 (1%) Query: 24 VGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDD 83 V + I+ + G M +I G G GK+T + L L +L N + Sbjct: 21 VQQQALINDVSLHIASGEMVAII--GPNGAGKSTLLRLLTGYLSPSHGECHLLGQNLNSW 78 Query: 84 RGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTM 131 + + R + +L P +++ + A + +QAL++ M Sbjct: 79 QPKALARTRAVMRQYSELAFPFSVSEVIQMGRAPYGGSQDRQALQQVM 126 >3JC6-4 nrPDB Length = 933 Score = 27.8 bits (60), Expect = 5.8, Method: Composition-based stats. Identities = 23/138 (16%), Positives = 44/138 (31%), Gaps = 16/138 (11%) Query: 30 IDRLQQIAKDGNMPHMIISGMPGIGKTTSV----HCLAHELLGRSYADGVLELNASDDRG 85 + G++ ++++ G P K+ + + + L A R Sbjct: 550 KTFTKGGRYRGDI-NILLCGDPSTSKSQILQYVHKITPRGVYTSGKGSSAVGLTAYITRD 608 Query: 86 IDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTMELYSNSTR---FAF 142 +D K + L + +DE D M+ + L ME + S Sbjct: 609 VDT-----KQLVLESGALVLSDGGVCCIDEFDKMSDSTRSVLHEVMEQQTISIAKAGIIT 663 Query: 143 ACNQSNKIIE---PLQSR 157 N + I+ P+ SR Sbjct: 664 TLNARSSILASANPIGSR 681 >3EC2-A nrPDB Length = 180 Score = 27.8 bits (60), Expect = 6.0, Method: Composition-based stats. Identities = 10/63 (15%), Positives = 21/63 (33%), Gaps = 11/63 (17%) Query: 13 EKYRPQVLSDIVGNKETIDRLQQIA-----KDGNMPHMIISGMPGIGKTTSVHCLAHELL 67 + Y P+ V + ++ ++G + G PG+GKT + Sbjct: 10 DTYHPKN----VSQNRALLTIRVFVHNFNPEEGK--GLTFVGSPGVGKTHLAVATLKAIY 63 Query: 68 GRS 70 + Sbjct: 64 EKK 66 >2IUU-A nrPDB Length = 491 Score = 27.8 bits (60), Expect = 6.5, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 21/44 (47%) Query: 28 ETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSY 71 I I MPH++++G G GK+ V+ + +L +S Sbjct: 200 HDIGGRPIITDLAKMPHLLVAGTTGSGKSVGVNAMLLSILFKST 243 >2IUT-A nrPDB Length = 574 Score = 27.8 bits (60), Expect = 6.7, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 21/44 (47%) Query: 28 ETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSY 71 I I MPH++++G G GK+ V+ + +L +S Sbjct: 200 HDIGGRPIITDLAKMPHLLVAGTTGSGKSVGVNAMLLSILFKST 243 >5U8S-7 nrPDB Length = 845 Score = 27.8 bits (60), Expect = 6.8, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 35/107 (32%), Gaps = 11/107 (10%) Query: 47 ISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPG 106 + G PG+ K+ + + Y G+ + +K ++ L G Sbjct: 458 LMGDPGVAKSQLLKAICKISPRGVYT------TGKGSSGVGLTAAVMKDPVTDEMILEGG 511 Query: 107 K-----HKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSN 148 + I +DE D M + A+ ME + S A N Sbjct: 512 ALVLADNGICCIDEFDKMDESDRTAIHEVMEQQTISISKAGINTTLN 558 >1VIA-A nrPDB Length = 175 Score = 27.8 bits (60), Expect = 6.8, Method: Composition-based stats. Identities = 10/58 (17%), Positives = 24/58 (41%) Query: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLH 102 ++ G G GK+T LA +L L + + ++ + ++F +++ Sbjct: 7 IVFIGFMGSGKSTLARALAKDLDLVFLDSDFLIEQKFNQKVSEIFEQKRENFFREQEQ 64 >1PZN-A nrPDB Length = 349 Score = 27.8 bits (60), Expect = 7.2, Method: Composition-based stats. Identities = 27/138 (19%), Positives = 49/138 (35%), Gaps = 12/138 (8%) Query: 47 ISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASD---DRGIDVVRNQIKHFAQKKLHL 103 + G G GKT H LA + G LN S D +I+ AQ + Sbjct: 136 VFGEFGSGKTQLAHTLAVMVQLPPEEGG---LNGSVIWIDTENTFRPERIREIAQNRGLD 192 Query: 104 PPGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSRCAILRY 163 P K + + A + + Q L + E + ++ K++ + S + R Sbjct: 193 PDEVLKHIYV--ARAFNSNHQMLLVQQAED---KIKELLNTDRPVKLLI-VDSLTSHFRS 246 Query: 164 SKLSDEDVLKRLLQIIKL 181 + + +R ++ K Sbjct: 247 EYIGRGALAERQQKLAKH 264 >3OZX-A nrPDB Length = 538 Score = 27.8 bits (60), Expect = 7.4, Method: Composition-based stats. Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%) Query: 37 AKDGNMPHMIISGMPGIGKTTSVHCLAHEL 66 AK+G + ++ G GIGKTT L E+ Sbjct: 291 AKEGEIIGIL--GPNGIGKTTFARILVGEI 318 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.311 0.127 0.298 Lambda K H 0.267 0.0391 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,427,992 Number of Sequences: 36641 Number of extensions: 320930 Number of successful extensions: 2105 Number of sequences better than 10.0: 241 Number of HSP's better than 10.0 without gapping: 210 Number of HSP's successfully gapped in prelim test: 103 Number of HSP's that attempted gapping in prelim test: 1767 Number of HSP's gapped (non-prelim): 355 length of query: 323 length of database: 10,336,785 effective HSP length: 97 effective length of query: 226 effective length of database: 6,782,608 effective search space: 1532869408 effective search space used: 1532869408 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 59 (27.4 bits)