BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P40202 (249 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5U9M-B nrPDB 508 e-145 1QUP-A nrPDB 462 e-131 1EJ8-A nrPDB 291 1e-79 6FON-A nrPDB 91 5e-19 2RSQ-A nrPDB 46 2e-05 4A48-A nrPDB 37 0.011 2E47-A nrPDB 34 0.068 2ROG-A nrPDB 33 0.11 4OJA-A nrPDB 33 0.17 2G4O-A nrPDB 30 0.79 2BMA-A nrPDB 30 0.84 4RVP-A nrPDB 29 1.5 5U32-A nrPDB 29 1.5 2GA7-A nrPDB 28 2.7 3IWL-A nrPDB 28 4.1 2N7Y-A nrPDB 28 4.5 2AW0-A nrPDB 28 4.7 4JJM-A nrPDB 28 5.2 5VDF-A nrPDB 27 5.9 4JRN-A nrPDB 27 8.2 >5U9M-B nrPDB Length = 248 Score = 508 bits (1308), Expect = e-145, Method: Compositional matrix adjust. Identities = 245/248 (98%), Positives = 245/248 (98%) Query: 2 TTNDTYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTL 61 TTNDTYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTL Sbjct: 1 TTNDTYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTL 60 Query: 62 RNCGKDAIIRGAGKPNSSAVAILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVN 121 RNCGKDAIIRGAGKPNSSAVAILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVN Sbjct: 61 RNCGKDAIIRGAGKPNSSAVAILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVN 120 Query: 122 GVPEAGNYHASIHEKGDVSKGVESTGKVWHKFDEPIECFNESDLGKNLYSGKTFLSAPLP 181 GVPEAGNYHASIHEKGDVSKGVESTGKVWHKFDEPIECFNESDLGKNLYSGKTFLSAPLP Sbjct: 121 GVPEAGNYHASIHEKGDVSKGVESTGKVWHKFDEPIECFNESDLGKNLYSGKTFLSAPLP 180 Query: 182 TWQLIGRSFVISKSLNHPENEPSSVKDYSFLGVIARSAGVWENNKQVCACTGKTVWEERK 241 TWQLIGRSFVISKSLNHPENEPSSVKDYSFLGVIARSAGVWENNKQVCACTGKTVW K Sbjct: 181 TWQLIGRSFVISKSLNHPENEPSSVKDYSFLGVIARSAGVWENNKQVCACTGKTVWAAAK 240 Query: 242 DALANNIK 249 DALANNIK Sbjct: 241 DALANNIK 248 >1QUP-A nrPDB Length = 222 Score = 462 bits (1188), Expect = e-131, Method: Compositional matrix adjust. Identities = 222/222 (100%), Positives = 222/222 (100%) Query: 2 TTNDTYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTL 61 TTNDTYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTL Sbjct: 1 TTNDTYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTL 60 Query: 62 RNCGKDAIIRGAGKPNSSAVAILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVN 121 RNCGKDAIIRGAGKPNSSAVAILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVN Sbjct: 61 RNCGKDAIIRGAGKPNSSAVAILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVN 120 Query: 122 GVPEAGNYHASIHEKGDVSKGVESTGKVWHKFDEPIECFNESDLGKNLYSGKTFLSAPLP 181 GVPEAGNYHASIHEKGDVSKGVESTGKVWHKFDEPIECFNESDLGKNLYSGKTFLSAPLP Sbjct: 121 GVPEAGNYHASIHEKGDVSKGVESTGKVWHKFDEPIECFNESDLGKNLYSGKTFLSAPLP 180 Query: 182 TWQLIGRSFVISKSLNHPENEPSSVKDYSFLGVIARSAGVWE 223 TWQLIGRSFVISKSLNHPENEPSSVKDYSFLGVIARSAGVWE Sbjct: 181 TWQLIGRSFVISKSLNHPENEPSSVKDYSFLGVIARSAGVWE 222 >1EJ8-A nrPDB Length = 140 Score = 291 bits (746), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 140/140 (100%), Positives = 140/140 (100%) Query: 78 SSAVAILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVNGVPEAGNYHASIHEKG 137 SSAVAILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVNGVPEAGNYHASIHEKG Sbjct: 1 SSAVAILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVNGVPEAGNYHASIHEKG 60 Query: 138 DVSKGVESTGKVWHKFDEPIECFNESDLGKNLYSGKTFLSAPLPTWQLIGRSFVISKSLN 197 DVSKGVESTGKVWHKFDEPIECFNESDLGKNLYSGKTFLSAPLPTWQLIGRSFVISKSLN Sbjct: 61 DVSKGVESTGKVWHKFDEPIECFNESDLGKNLYSGKTFLSAPLPTWQLIGRSFVISKSLN 120 Query: 198 HPENEPSSVKDYSFLGVIAR 217 HPENEPSSVKDYSFLGVIAR Sbjct: 121 HPENEPSSVKDYSFLGVIAR 140 >6FON-A nrPDB Length = 252 Score = 90.9 bits (224), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 65/251 (25%), Positives = 121/251 (48%), Gaps = 32/251 (12%) Query: 11 YAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAII 70 +A+ M ++ V+ ++ L+ V G+ + +E Q++ V +++ + L G+ A++ Sbjct: 9 FAVQMTSQSSVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVL 68 Query: 71 RGAGKPN----SSAVAILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVNGVPEA 126 +G G +AVAIL V+G+ R +Q+ + L + T++G+ E Sbjct: 69 KGMGSGQLQNLGAAVAIL----------GGPGTVQGVVRFLQLTPERCLIEGTIDGL-EP 117 Query: 127 GNYHASIHEKGDVSKGVESTGKVWH----KFDEPIEC-FNESDLG--KNLYSGKTFLSA- 178 G + +H+ GD++ S G ++ P + + DLG + G+ Sbjct: 118 GLHGLHVHQYGDLTNNCNSCGNHFNPDGASHGGPQDSDRHRGDLGNVRADADGRAIFRME 177 Query: 179 --PLPTWQLIGRSFVISKSLN------HPENEPSSVKDYSF-LGVIARSAGVWENNKQVC 229 L W +IGRS +I + + HP ++ + G+IARSAG+++N KQ+C Sbjct: 178 DEQLKVWDVIGRSLIIDEGEDDLGRGGHPLSKITGNSGERLACGIIARSAGLFQNPKQIC 237 Query: 230 ACTGKTVWEER 240 +C G T+WEER Sbjct: 238 SCDGLTIWEER 248 >2RSQ-A nrPDB Length = 89 Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 16/64 (25%), Positives = 37/64 (57%) Query: 11 YAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAII 70 +A+ M C++CV+ ++ L+ V G+ + +E Q++ V +++ + L G+ A++ Sbjct: 20 FAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVL 79 Query: 71 RGAG 74 +G G Sbjct: 80 KGMG 83 >4A48-A nrPDB Length = 69 Score = 36.6 bits (83), Expect = 0.011, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%) Query: 15 MHCENCVNDIKACLKNVPGINS--LNFDIEQQIMSVESSVAPSTIINTLRNCGKDA 68 M C +C + I+ + VPG+ S +NF +EQ ++S P + + + G A Sbjct: 11 MDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHA 66 >2E47-A nrPDB Length = 156 Score = 33.9 bits (76), Expect = 0.068, Method: Compositional matrix adjust. Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 12/73 (16%) Query: 78 SSAVAILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVNGVPEAGNYHASIHEKG 137 S A+A+L T +RG QV + K + G+P G Y +HEKG Sbjct: 8 SRAIAVLST-----------ETIRGNITFTQVQDGKVHVQGGITGLP-PGEYGFHVHEKG 55 Query: 138 DVSKGVESTGKVW 150 D+S G STG + Sbjct: 56 DLSGGCLSTGSHF 68 >2ROG-A nrPDB Length = 66 Score = 33.1 bits (74), Expect = 0.11, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 25/54 (46%) Query: 15 MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDA 68 M C +CV + LK VPG+ + +E+ VE + P ++ + G A Sbjct: 9 MTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVEEEGYKA 62 >4OJA-A nrPDB Length = 170 Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust. Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 12/77 (15%) Query: 79 SAVAILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVNGVPEAGNYHASIHEKGD 138 SA+ +LE K TI + +G+ KT + G+ G + IH+ GD Sbjct: 22 SAICVLEGIVKGTI------------KFEDIGDGKTHVSGKITGLQPPGKHGFHIHQFGD 69 Query: 139 VSKGVESTGKVWHKFDE 155 S G STG ++ F++ Sbjct: 70 YSGGCMSTGPHFNPFNK 86 >2G4O-A nrPDB Length = 337 Score = 30.4 bits (67), Expect = 0.79, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 3/55 (5%) Query: 24 IKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGA-GKPN 77 +K VPG+ ++D+ + V P +++ LRN DAI+ GA G P+ Sbjct: 21 VKVLDAVVPGVQKTSYDLGARRFHATGEVLPDSVVAELRN--HDAILLGAIGDPS 73 >2BMA-A nrPDB Length = 470 Score = 30.4 bits (67), Expect = 0.84, Method: Compositional matrix adjust. Identities = 18/70 (25%), Positives = 34/70 (48%) Query: 137 GDVSKGVESTGKVWHKFDEPIECFNESDLGKNLYSGKTFLSAPLPTWQLIGRSFVISKSL 196 GD+ G G ++ ++ + + FN + GKN+ G + L + L+ + KSL Sbjct: 187 GDIGVGGREIGYLYGQYKKIVNSFNGTLTGKNVKWGGSNLRVEATGYGLVYFVLEVLKSL 246 Query: 197 NHPENEPSSV 206 N P + ++V Sbjct: 247 NIPVEKQTAV 256 >4RVP-A nrPDB Length = 158 Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust. Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 18/127 (14%) Query: 83 ILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVNGV-PEAGNYHASIHEKGDVSK 141 IL +K K ++AV G+ + Q + T ++ + G+ P +H +HE GD + Sbjct: 2 ILAAKKKAVAVLKGNSAVEGVVTLTQEEDGPTTVNVRITGLTPGPHGFH--LHEFGDTTN 59 Query: 142 GVESTGK------VWHKFDEPIECFNESDLGKNLYSGK-----TFLSAPLPTW---QLIG 187 G STG + H E E + DLG + + T + +P ++G Sbjct: 60 GCISTGPHFNPKGLTHGAPED-EIRHAGDLGNIVANADGVAEVTIVDNQIPLTGPNAVVG 118 Query: 188 RSFVISK 194 R+FV+ + Sbjct: 119 RAFVVHE 125 >5U32-A nrPDB Length = 236 Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 9/75 (12%) Query: 91 TIDQKKDTAVRGLARIVQVGEN--------KTLFDITVNGVPEAGNYHASIHEKGDVSKG 142 TIDQK+D + + + N + L+DIT N V + G+ H SI + D Sbjct: 90 TIDQKRDEHLDDTVDLKYIAINFIPEDLSEEELWDITYNRVIQRGDNHQSIKSQLD-ENL 148 Query: 143 VESTGKVWHKFDEPI 157 VES K + + +PI Sbjct: 149 VESVMKGFIQRYQPI 163 >2GA7-A nrPDB Length = 90 Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust. Identities = 16/53 (30%), Positives = 33/53 (62%), Gaps = 4/53 (7%) Query: 9 ATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQ---IMSVESSVAPSTI 57 AT+ I MHC++CV++I++ L + ++S+ +E + ++ SSV P ++ Sbjct: 5 ATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESL 57 >3IWL-A nrPDB Length = 68 Score = 28.1 bits (61), Expect = 4.1, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Query: 11 YAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGK 66 +++ M C C + L + G+ + D+ + + +ES + T++ TL+ GK Sbjct: 6 FSVDMTCGGCAEAVSRVLNKLGGVK-YDIDLPNKKVCIESEHSMDTLLATLKKTGK 60 >2N7Y-A nrPDB Length = 76 Score = 27.7 bits (60), Expect = 4.5, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Query: 15 MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTI 57 M C++CV I+ + N+ GI S+ +EQ +V+ PS + Sbjct: 16 MTCQSCVKSIEDRISNLKGIISMKVSLEQGSATVK--YVPSVV 56 >2AW0-A nrPDB Length = 72 Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust. Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 3/59 (5%) Query: 15 MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESS---VAPSTIINTLRNCGKDAII 70 M C +CV I+ + PG+ S+ + +VE +P T+ + + G DA + Sbjct: 12 MTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATL 70 >4JJM-A nrPDB Length = 175 Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust. Identities = 35/147 (23%), Positives = 53/147 (36%), Gaps = 23/147 (15%) Query: 113 KTLFDITVNGVPEAGNYHASIHEKGDVSKGVESTGKVWHKFDEPIECFNESDLGKN---- 168 K FD+TV G P AG + + T + F C E +GK+ Sbjct: 8 KVFFDMTVGGQP-AGRIVMELF--------ADVTPRTAENFRA--LCTGEKGIGKSGKPL 56 Query: 169 LYSGKTFLSAPLPTWQLIGRSFVISKSLNHPENEPSSVKDYSFL------GVIARS-AGV 221 Y G +F +P + G F S D +F+ G+++ + AG Sbjct: 57 HYKGSSFHRV-IPGFMCQGGDFTAGNGTGGESIYGSKFADENFVKKHTGPGILSMANAGP 115 Query: 222 WENNKQVCACTGKTVWEERKDALANNI 248 N Q CT KT W + K + + Sbjct: 116 GTNGSQFFVCTAKTEWLDGKHVVFGQV 142 >5VDF-A nrPDB Length = 73 Score = 27.3 bits (59), Expect = 5.9, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 11 YAIPMHCENCVNDIKACLKNV-PGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKD 67 + + M C C + L + P ++ ++ +E+Q++ V +++ I+ ++ GK+ Sbjct: 9 FNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKE 66 >4JRN-A nrPDB Length = 372 Score = 26.9 bits (58), Expect = 8.2, Method: Compositional matrix adjust. Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 9/73 (12%) Query: 107 VQVGENKTLFDITVNGVPEAGNYHASIHEKGDVSKGVESTGKVWHKFDEP-----IECFN 161 V GE +TL V G P A+++E DV E KV+ EP ++ Sbjct: 62 VTTGETRTL----VRGAPLGSGGFATVYEATDVETNEELAVKVFMSEKEPTDETMLDLQR 117 Query: 162 ESDLGKNLYSGKT 174 ES +N KT Sbjct: 118 ESSCYRNFSLAKT 130 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5U9M-B nrPDB 446 e-126 1QUP-A nrPDB 397 e-111 6FON-A nrPDB 323 4e-89 1EJ8-A nrPDB 252 1e-67 2RSQ-A nrPDB 111 3e-25 Sequences not found previously or not previously below threshold: 6FOL-A nrPDB 179 9e-46 4OJA-A nrPDB 83 1e-16 2E47-A nrPDB 79 1e-15 4RVP-A nrPDB 77 5e-15 1TO4-A nrPDB 77 7e-15 3KM2-A nrPDB 73 1e-13 5YTU-A nrPDB 72 2e-13 1SRD-A nrPDB 72 2e-13 3F7K-A nrPDB 72 2e-13 3HW7-A nrPDB 72 3e-13 3KBF-A nrPDB 72 3e-13 3LTV-A nrPDB 71 4e-13 3ECW-A nrPDB 69 1e-12 5IN2-A nrPDB 69 3e-12 2Q2L-A nrPDB 68 4e-12 4U4I-A nrPDB 68 5e-12 3MND-A nrPDB 67 8e-12 1XSO-A nrPDB 67 1e-11 2MP3-A nrPDB 66 2e-11 3CE1-A nrPDB 64 5e-11 1F1A-A nrPDB 56 1e-08 3L9Y-A nrPDB 55 2e-08 2JLP-A nrPDB 53 1e-07 2ROG-A nrPDB 46 2e-05 4A48-A nrPDB 42 3e-04 5VDF-A nrPDB 42 3e-04 1U3N-A nrPDB 36 0.013 1OQ6-A nrPDB 35 0.020 6FLH-A nrPDB 35 0.043 2GA7-A nrPDB 34 0.052 4N5A-A nrPDB 34 0.069 2AW0-A nrPDB 33 0.11 6A72-A nrPDB 33 0.15 2L3M-A nrPDB 33 0.16 2KT3-A nrPDB 33 0.17 1KVJ-A nrPDB 32 0.22 2N7Y-A nrPDB 32 0.23 2ROP-A nrPDB 32 0.26 4Y2I-A nrPDB 32 0.30 1ESO-A nrPDB 31 0.38 2LQB-A nrPDB 31 0.41 4N3U-A nrPDB 31 0.51 1YAI-A nrPDB 31 0.58 1Z9P-A nrPDB 30 0.64 1Z9N-A nrPDB 30 0.66 2RML-A nrPDB 30 0.74 3KJP-A nrPDB 30 1.0 4A47-A nrPDB 30 1.3 1FVQ-A nrPDB 29 1.7 2EW9-A nrPDB 29 2.1 1Q8L-A nrPDB 29 2.2 1K0V-A nrPDB 29 2.2 1S6U-A nrPDB 29 2.2 2BMA-A nrPDB 28 3.6 1YG0-A nrPDB 27 7.1 4LVQ-A nrPDB 27 7.3 >5U9M-B nrPDB Length = 248 Score = 446 bits (1146), Expect = e-126, Method: Composition-based stats. Identities = 245/248 (98%), Positives = 245/248 (98%) Query: 2 TTNDTYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTL 61 TTNDTYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTL Sbjct: 1 TTNDTYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTL 60 Query: 62 RNCGKDAIIRGAGKPNSSAVAILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVN 121 RNCGKDAIIRGAGKPNSSAVAILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVN Sbjct: 61 RNCGKDAIIRGAGKPNSSAVAILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVN 120 Query: 122 GVPEAGNYHASIHEKGDVSKGVESTGKVWHKFDEPIECFNESDLGKNLYSGKTFLSAPLP 181 GVPEAGNYHASIHEKGDVSKGVESTGKVWHKFDEPIECFNESDLGKNLYSGKTFLSAPLP Sbjct: 121 GVPEAGNYHASIHEKGDVSKGVESTGKVWHKFDEPIECFNESDLGKNLYSGKTFLSAPLP 180 Query: 182 TWQLIGRSFVISKSLNHPENEPSSVKDYSFLGVIARSAGVWENNKQVCACTGKTVWEERK 241 TWQLIGRSFVISKSLNHPENEPSSVKDYSFLGVIARSAGVWENNKQVCACTGKTVW K Sbjct: 181 TWQLIGRSFVISKSLNHPENEPSSVKDYSFLGVIARSAGVWENNKQVCACTGKTVWAAAK 240 Query: 242 DALANNIK 249 DALANNIK Sbjct: 241 DALANNIK 248 >1QUP-A nrPDB Length = 222 Score = 397 bits (1021), Expect = e-111, Method: Composition-based stats. Identities = 222/222 (100%), Positives = 222/222 (100%) Query: 2 TTNDTYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTL 61 TTNDTYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTL Sbjct: 1 TTNDTYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTL 60 Query: 62 RNCGKDAIIRGAGKPNSSAVAILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVN 121 RNCGKDAIIRGAGKPNSSAVAILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVN Sbjct: 61 RNCGKDAIIRGAGKPNSSAVAILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVN 120 Query: 122 GVPEAGNYHASIHEKGDVSKGVESTGKVWHKFDEPIECFNESDLGKNLYSGKTFLSAPLP 181 GVPEAGNYHASIHEKGDVSKGVESTGKVWHKFDEPIECFNESDLGKNLYSGKTFLSAPLP Sbjct: 121 GVPEAGNYHASIHEKGDVSKGVESTGKVWHKFDEPIECFNESDLGKNLYSGKTFLSAPLP 180 Query: 182 TWQLIGRSFVISKSLNHPENEPSSVKDYSFLGVIARSAGVWE 223 TWQLIGRSFVISKSLNHPENEPSSVKDYSFLGVIARSAGVWE Sbjct: 181 TWQLIGRSFVISKSLNHPENEPSSVKDYSFLGVIARSAGVWE 222 >6FON-A nrPDB Length = 252 Score = 323 bits (828), Expect = 4e-89, Method: Composition-based stats. Identities = 65/251 (25%), Positives = 121/251 (48%), Gaps = 32/251 (12%) Query: 11 YAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAII 70 +A+ M ++ V+ ++ L+ V G+ + +E Q++ V +++ + L G+ A++ Sbjct: 9 FAVQMTSQSSVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVL 68 Query: 71 RGAGKPN----SSAVAILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVNGVPEA 126 +G G +AVAIL V+G+ R +Q+ + L + T++G+ E Sbjct: 69 KGMGSGQLQNLGAAVAIL----------GGPGTVQGVVRFLQLTPERCLIEGTIDGL-EP 117 Query: 127 GNYHASIHEKGDVSKGVESTGKVWH----KFDEPIEC-FNESDLG--KNLYSGKTFLSA- 178 G + +H+ GD++ S G ++ P + + DLG + G+ Sbjct: 118 GLHGLHVHQYGDLTNNCNSCGNHFNPDGASHGGPQDSDRHRGDLGNVRADADGRAIFRME 177 Query: 179 --PLPTWQLIGRSFVISKSLN------HPENEPSSVKDYSF-LGVIARSAGVWENNKQVC 229 L W +IGRS +I + + HP ++ + G+IARSAG+++N KQ+C Sbjct: 178 DEQLKVWDVIGRSLIIDEGEDDLGRGGHPLSKITGNSGERLACGIIARSAGLFQNPKQIC 237 Query: 230 ACTGKTVWEER 240 +C G T+WEER Sbjct: 238 SCDGLTIWEER 248 >1EJ8-A nrPDB Length = 140 Score = 252 bits (644), Expect = 1e-67, Method: Composition-based stats. Identities = 140/140 (100%), Positives = 140/140 (100%) Query: 78 SSAVAILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVNGVPEAGNYHASIHEKG 137 SSAVAILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVNGVPEAGNYHASIHEKG Sbjct: 1 SSAVAILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVNGVPEAGNYHASIHEKG 60 Query: 138 DVSKGVESTGKVWHKFDEPIECFNESDLGKNLYSGKTFLSAPLPTWQLIGRSFVISKSLN 197 DVSKGVESTGKVWHKFDEPIECFNESDLGKNLYSGKTFLSAPLPTWQLIGRSFVISKSLN Sbjct: 61 DVSKGVESTGKVWHKFDEPIECFNESDLGKNLYSGKTFLSAPLPTWQLIGRSFVISKSLN 120 Query: 198 HPENEPSSVKDYSFLGVIAR 217 HPENEPSSVKDYSFLGVIAR Sbjct: 121 HPENEPSSVKDYSFLGVIAR 140 >6FOL-A nrPDB Length = 150 Score = 179 bits (454), Expect = 9e-46, Method: Composition-based stats. Identities = 38/161 (23%), Positives = 67/161 (41%), Gaps = 28/161 (17%) Query: 74 GKPNSSAVAILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVNGVPEAGNYHASI 133 G +AVAIL V+G+ R +Q+ + L + T++G+ E G + + Sbjct: 1 GANLGAAVAIL----------GGPGTVQGVVRFLQLTPERCLIEGTIDGL-EPGLHGLHV 49 Query: 134 HEKGDVSKGVESTGKVWH----KFDEPIEC-FNESDLG--KNLYSGKTFLSA---PLPTW 183 H+ GD++ S G ++ P + + DLG + G+ L W Sbjct: 50 HQYGDLTNNCNSCGNHFNPDGASHGGPQDSDRHRGDLGNVRADADGRAIFRMEDEQLKVW 109 Query: 184 QLIGRSFVISKSLN------HPENEPSSVKDYSF-LGVIAR 217 +IGRS +I + + HP ++ + G+IAR Sbjct: 110 DVIGRSLIIDEGEDDLGRGGHPLSKITGNSGERLACGIIAR 150 >2RSQ-A nrPDB Length = 89 Score = 111 bits (277), Expect = 3e-25, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 37/67 (55%) Query: 11 YAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAII 70 +A+ M C++CV+ ++ L+ V G+ + +E Q++ V +++ + L G+ A++ Sbjct: 20 FAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVL 79 Query: 71 RGAGKPN 77 +G G Sbjct: 80 KGMGSGQ 86 >4OJA-A nrPDB Length = 170 Score = 82.8 bits (203), Expect = 1e-16, Method: Composition-based stats. Identities = 31/143 (21%), Positives = 59/143 (41%), Gaps = 20/143 (13%) Query: 97 DTAVRGLARIVQVGENKTLFDITVNGVPEAGNYHASIHEKGDVSKGVESTGKVWH----K 152 + V+G + +G+ KT + G+ G + IH+ GD S G STG ++ + Sbjct: 28 EGIVKGTIKFEDIGDGKTHVSGKITGLQPPGKHGFHIHQFGDYSGGCMSTGPHFNPFNKE 87 Query: 153 FDEPIE-CFNESDLGKNLYS--GKT---FLSAPLPT---WQLIGRSFVISKSLN------ 197 P + + DLG + G + +P +IGR+ V+ ++ + Sbjct: 88 HGGPEDENRHAGDLGNIVSDDYGNADVNIEDSQIPLDGPNSIIGRALVVHQNEDDLGLGG 147 Query: 198 HPENEPSSVKDYSF-LGVIARSA 219 H +++ + GVI +A Sbjct: 148 HKDSKTTGNAGARLSCGVIGLAA 170 >2E47-A nrPDB Length = 156 Score = 79.4 bits (194), Expect = 1e-15, Method: Composition-based stats. Identities = 39/159 (24%), Positives = 62/159 (38%), Gaps = 32/159 (20%) Query: 78 SSAVAILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVNGVPEAGNYHASIHEKG 137 S A+A+L T +RG QV + K + G+P G Y +HEKG Sbjct: 8 SRAIAVLSTE-----------TIRGNITFTQVQDGKVHVQGGITGLP-PGEYGFHVHEKG 55 Query: 138 DVSKGVESTGKVWH----KFDEPIE-CFNESDLGKNLYSGKTFLSAPLPTWQ-------- 184 D+S G STG ++ P + + DLG ++ + L Q Sbjct: 56 DLSGGCLSTGSHFNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHG 115 Query: 185 LIGRSFVISK------SLNHPENEPSSVKDYSF-LGVIA 216 +IGR+ V+ + +HP++ + GVI Sbjct: 116 IIGRAVVLHEKADDYGKSDHPDSRKTGNAGGRVACGVIG 154 >4RVP-A nrPDB Length = 158 Score = 77.4 bits (189), Expect = 5e-15, Method: Composition-based stats. Identities = 34/154 (22%), Positives = 61/154 (39%), Gaps = 21/154 (13%) Query: 83 ILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVNGVPEAGNYHASIHEKGDVSKG 142 IL +K K ++AV G+ + Q + T ++ + G+ G + +HE GD + G Sbjct: 2 ILAAKKKAVAVLKGNSAVEGVVTLTQEEDGPTTVNVRITGLT-PGPHGFHLHEFGDTTNG 60 Query: 143 VESTGKVWH----KFDEPIEC-FNESDLGK--NLYSG---KTFLSAPLPTW---QLIGRS 189 STG ++ P + + DLG G T + +P ++GR+ Sbjct: 61 CISTGPHFNPKGLTHGAPEDEIRHAGDLGNIVANADGVAEVTIVDNQIPLTGPNAVVGRA 120 Query: 190 FVISKSLN------HPENEPSSVKDYSF-LGVIA 216 FV+ + + H + + GVI Sbjct: 121 FVVHELEDDLGKGGHELSLSTGNAGGRLACGVIG 154 >1TO4-A nrPDB Length = 156 Score = 77.1 bits (188), Expect = 7e-15, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 56/145 (38%), Gaps = 22/145 (15%) Query: 96 KDTAVRGLARIVQVGENKTL-FDITVNGVPEAGNYHASIHEKGDVSKGVESTGKVWH--- 151 V+G+ + Q +N + +G+ +AG + +HE GD + G S G ++ Sbjct: 12 GTAGVKGVVKFTQETDNGPVHVHAEFSGL-KAGKHGFHVHEFGDTTNGCTSAGAHFNPTK 70 Query: 152 -KFDEPIEC-FNESDLGK--NLYSGKTFLSAPLPTWQL------IGRSFVISKSLN---- 197 + P + + DLG G +A L IGRS VI ++ + Sbjct: 71 QEHGAPEDSIRHVGDLGNVVAGADGNAVYNATDKLISLNGSHSIIGRSMVIHENEDDLGR 130 Query: 198 --HPENEPSSVKDYSF-LGVIARSA 219 H ++ + GV+ +A Sbjct: 131 GGHELSKVTGNAGGRLACGVVGLAA 155 >3KM2-A nrPDB Length = 154 Score = 73.2 bits (178), Expect = 1e-13, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 55/142 (38%), Gaps = 21/142 (14%) Query: 95 KKDTAVRGLARIVQVGENKTLFDITVNGVPEAGNYHASIHEKGDVSKGVESTGKVWH--- 151 K ++ V G+ + Q + T ++ + G+ G + +HE GD + G STG ++ Sbjct: 10 KGNSNVEGVVTLSQDDDGPTTVNVRITGLA-PGLHGFHLHEYGDTTNGCMSTGAHFNPNK 68 Query: 152 -KFDEP-IECFNESDLGK--NLYSG---KTFLSAPLPTW---QLIGRSFVISKSLN---- 197 P E + DLG G T + +P ++GR+ V+ + + Sbjct: 69 LTHGAPGDEIRHAGDLGNIVANADGVAEVTLVDNQIPLTGPNSVVGRALVVHELEDDLGK 128 Query: 198 --HPENEPSSVKDYSF-LGVIA 216 H + + GV+ Sbjct: 129 GGHELSLTTGNAGGRLACGVVG 150 >5YTU-A nrPDB Length = 180 Score = 72.4 bits (176), Expect = 2e-13, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 53/143 (37%), Gaps = 22/143 (15%) Query: 95 KKDTAVRGLARIVQVGENKTL-FDITVNGVPEAGNYHASIHEKGDVSKGVESTGKVWH-- 151 K D V+G+ Q N + ++ G+ E G + +HE GD + G S G ++ Sbjct: 36 KGDGPVQGIINFEQKESNGPVKVWGSIKGLTE-GLHGFHVHEFGDNTAGCTSAGPHFNPL 94 Query: 152 --KFDEPIE-CFNESDLGK--NLYSGKTFLSAPLPTWQL------IGRSFVISKSLN--- 197 K P + + DLG G +S L IGR+ V+ + + Sbjct: 95 SRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLG 154 Query: 198 ---HPENEPSSVKDYSF-LGVIA 216 + E+ + GVI Sbjct: 155 KGGNEESTKTGNAGSRLACGVIG 177 >1SRD-A nrPDB Length = 154 Score = 72.4 bits (176), Expect = 2e-13, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 55/142 (38%), Gaps = 21/142 (14%) Query: 95 KKDTAVRGLARIVQVGENKTLFDITVNGVPEAGNYHASIHEKGDVSKGVESTGKVWH--- 151 K + V G+ + Q + T ++ ++G+ G + +HE GD + G STG ++ Sbjct: 10 KGTSNVEGVVTLTQEDDGPTTVNVRISGLA-PGKHGFHLHEFGDTTNGCMSTGPHFNPDK 68 Query: 152 -KFDEPIE-CFNESDLGK--NLYSG---KTFLSAPLPTW---QLIGRSFVISKSLN---- 197 P + + DLG G T + +P ++GR+ V+ + + Sbjct: 69 KTHGAPEDEVRHAGDLGNIVANTDGVAEATIVDNQIPLTGPNSVVGRALVVHELEDDLGK 128 Query: 198 --HPENEPSSVKDYSF-LGVIA 216 H + + GV+ Sbjct: 129 GGHELSPTTGNAGGRLACGVVG 150 >3F7K-A nrPDB Length = 152 Score = 72.1 bits (175), Expect = 2e-13, Method: Composition-based stats. Identities = 30/142 (21%), Positives = 55/142 (38%), Gaps = 22/142 (15%) Query: 95 KKDTAVRGLARIVQVGENKTLFDITVNGVPEAGNYHASIHEKGDVSKGVESTGKVWH--- 151 K D+ V G + + G+ T + G+ G + +HE GD + G S G ++ Sbjct: 9 KGDSPVTGTIHLKEEGDMVT-VTGEITGLT-PGKHGFHVHEFGDNTNGCTSAGGHFNPHG 66 Query: 152 -KFDEPIE-CFNESDLGKNLY--SGKTFLSAPLPTWQL------IGRSFVISKSLN---- 197 + P + + DLG + GK ++ +L IGR+ V+ + Sbjct: 67 KEHGAPEDENRHAGDLGNVVAGEDGKAVINMKDKLVKLTGPDSVIGRTLVVHVDEDDLGR 126 Query: 198 --HPENEPSSVKDYSF-LGVIA 216 H +++ + GVI Sbjct: 127 GGHEQSKITGNAGGRLACGVIG 148 >3HW7-A nrPDB Length = 151 Score = 71.7 bits (174), Expect = 3e-13, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 56/142 (39%), Gaps = 22/142 (15%) Query: 95 KKDTAVRGLARIVQVGENKTLFDITVNGVPEAGNYHASIHEKGDVSKGVESTGKVWH--- 151 K D V+G G + + ++ G+ E G++ +H+ GD ++G S G ++ Sbjct: 9 KGDGPVQGTIHFEAKG-DTVVVTGSITGLTE-GDHGFHVHQFGDNTQGCTSAGPHFNPLS 66 Query: 152 -KFDEPIE-CFNESDLGK--NLYSGKTFLSAPLPT------WQLIGRSFVISKSLN---- 197 K P + + DLG +G + P + +IGR+ V+ + + Sbjct: 67 KKHGGPKDEERHVGDLGNVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLGR 126 Query: 198 --HPENEPSSVKDYSF-LGVIA 216 + E+ + GVI Sbjct: 127 GGNEESTKTGNAGSRLACGVIG 148 >3KBF-A nrPDB Length = 157 Score = 71.7 bits (174), Expect = 3e-13, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 50/145 (34%), Gaps = 25/145 (17%) Query: 99 AVRGLARIVQVGEN-KTLFDITVNGVPEAGNYHASIHEKGDVSKGVESTGKVWH----KF 153 V G I Q EN + + + + G+ G + +H+ GD + G S G ++ Sbjct: 12 TVTGTIWITQKSENDQAVIEGEIKGLT-PGLHGFHVHQYGDSTNGCISAGPHFNPFGKTH 70 Query: 154 DEPI-ECFNESDLGKNLYSGKTFLSAPLPTW--------QLIGRSFVISKSLNH------ 198 P E + DLG L ++GRS V+ + Sbjct: 71 GGPKSEIRHVGDLGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHAGQDDLGEGVG 130 Query: 199 ---PENEPSSVKDYS-FLGVIARSA 219 E++ + GVIA +A Sbjct: 131 DKAEESKKTGNAGARAACGVIALAA 155 >3LTV-A nrPDB Length = 153 Score = 71.3 bits (173), Expect = 4e-13, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 51/143 (35%), Gaps = 22/143 (15%) Query: 95 KKDTAVRGLARIVQ-VGENKTLFDITVNGVPEAGNYHASIHEKGDVSKGVESTGKVWH-- 151 K D V+G Q + + G+ E G + +H+ GD ++G S G ++ Sbjct: 9 KGDGPVQGTIHFEQKASGEPVVLSGQITGLTE-GQHGFHVHQYGDNTQGCTSAGPHFNPH 67 Query: 152 --KFDEPIE-CFNESDLGK--NLYSGKTFLSAPLPTWQL------IGRSFVISKSLN--- 197 K P + + DLG G +S L IGR+ V+ + + Sbjct: 68 SKKHGGPADEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLG 127 Query: 198 ---HPENEPSSVKDYSF-LGVIA 216 + E+ + GVI Sbjct: 128 KGGNEESTKTGNAGSRLACGVIG 150 >3ECW-A nrPDB Length = 153 Score = 69.4 bits (168), Expect = 1e-12, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 52/143 (36%), Gaps = 22/143 (15%) Query: 95 KKDTAVRGLARIVQVGENKTL-FDITVNGVPEAGNYHASIHEKGDVSKGVESTGKVWH-- 151 K D V+G+ Q N + ++ G+ E G + +HE GD G S G ++ Sbjct: 9 KGDGPVQGIINFEQKESNGPVKVWGSIKGLTE-GLHGFHVHEFGDNRAGCTSAGPHFNPL 67 Query: 152 --KFDEPIE-CFNESDLGK--NLYSGKTFLSAPLPTWQL------IGRSFVISKSLN--- 197 K P + + DLG G +S L IGR+ V+ + + Sbjct: 68 SRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLG 127 Query: 198 ---HPENEPSSVKDYSF-LGVIA 216 + E+ + GVI Sbjct: 128 KGGNEESTKTGNAGSRLACGVIG 150 >5IN2-A nrPDB Length = 158 Score = 68.6 bits (166), Expect = 3e-12, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 53/149 (35%), Gaps = 25/149 (16%) Query: 95 KKDTAVRGLARIVQ-VGENKTLFDITVNGVPEAGNYHASIHEKGDVSKGVESTGKVWH-- 151 + D V G+ Q G + T +V+G+ G + +H+ GD + G S G ++ Sbjct: 9 RGDAGVSGIIYFQQGSGGSITTISGSVSGLT-PGLHGFHVHQYGDQTNGCTSAGDHYNPF 67 Query: 152 --KFDEPIE-CFNESDLGKNLYSGKTFLSAPLPTWQ--------LIGRSFVISKSLN--- 197 P + + DLG + + ++ +IG S V+ + + Sbjct: 68 GKTHGGPNDRIKHIGDLGNIVAGANGVAEVYINSYDIKLRGPLSVIGHSLVVHANTDDLG 127 Query: 198 ------HPENEPSSVKDYSF-LGVIARSA 219 E+ + GVI +A Sbjct: 128 QGTGNMREESLKTGNAGSRLACGVIGIAA 156 >2Q2L-A nrPDB Length = 152 Score = 67.8 bits (164), Expect = 4e-12, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 50/137 (36%), Gaps = 21/137 (15%) Query: 100 VRGLARIVQVGENKTLFDITVNGVPEAGNYHASIHEKGDVSKGVESTGKVWH----KFDE 155 V G Q G+ T ++G+ + G + +H GD + G STG ++ + Sbjct: 14 VAGTILFTQEGDGPTTVTGNISGL-KPGLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGS 72 Query: 156 PIE-CFNESDLGKNLY--SGKTFLSA---PLPT---WQLIGRSFVISKSLN------HPE 200 P + + DLG G + +P +IGR+ V+ + H Sbjct: 73 PEDETRHAGDLGNITVGDDGTACFTIVDKQIPLTGPHSIIGRAVVVHADPDDLGKGGHEL 132 Query: 201 NEPSSVKDYSF-LGVIA 216 ++ + G+I Sbjct: 133 SKSTGNAGGRIACGIIG 149 >4U4I-A nrPDB Length = 161 Score = 67.8 bits (164), Expect = 5e-12, Method: Composition-based stats. Identities = 33/135 (24%), Positives = 52/135 (38%), Gaps = 22/135 (16%) Query: 102 GLARIVQVGENKTLFDITVNGVPEAGNYHASIHEKGDVSKGVESTGKVWHKFDE-----P 156 G A Q+ + T + +P G + IH+ GD G S G ++ F+ Sbjct: 26 GYAIFTQL-PDCTEIQFHLKNLP-PGKHGCHIHKSGDRRNGCTSMGPHFNPFNGVHKDIN 83 Query: 157 IECFNESDLG-----KNLYSGKTFLSAPLPTW---QLIGRSFVISKSL------NHPENE 202 I+ + DLG N + LP Q+IGR VI + NHP+++ Sbjct: 84 IQHNHLGDLGNIVVNNNGECNEIICVKYLPLTGSNQIIGRGLVIHEKEDDLGMTNHPDSK 143 Query: 203 PSSVKDYSF-LGVIA 216 + G+IA Sbjct: 144 TTGNSGDRIACGIIA 158 >3MND-A nrPDB Length = 152 Score = 66.7 bits (161), Expect = 8e-12, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 48/142 (33%), Gaps = 22/142 (15%) Query: 95 KKDTAVRGLARIVQVGENKTLFDITVNGVPEAGNYHASIHEKGDVSKGVESTGKVWHKFD 154 + + V+G+ Q G + G+ + G + +HE GD ++G S G ++ Sbjct: 8 RGEEGVKGVVHFTQAG-DAVKVHAEFEGL-KPGKHGFHVHEFGDTTQGCTSAGAHFNPHG 65 Query: 155 EPIEC-----FNESDLGK--NLYSGKTFLSAPLPTWQL------IGRSFVISKSLN---- 197 + + DLG GK L L IGRS VI + Sbjct: 66 KNHGAPDAAERHVGDLGNVTAGADGKATLDLTDKMISLTGEHSVIGRSLVIHVDPDDLGL 125 Query: 198 --HPENEPSSVKDYSF-LGVIA 216 H + + G+I Sbjct: 126 GGHELSLITGNAGGRVACGIIG 147 >1XSO-A nrPDB Length = 150 Score = 66.7 bits (161), Expect = 1e-11, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 51/143 (35%), Gaps = 22/143 (15%) Query: 96 KDTAVRGLARIVQVGENKTLFDITVNGVPEAGNYHASIHEKGDVSKGVESTGKVWH---- 151 V+G+ Q E + + G+ + G + IH GD + G S G ++ Sbjct: 9 GSGDVKGVVHFEQQDEGAVSVEGKIEGLTD-GLHGFHIHVFGDNTNGCMSAGSHFNPENK 67 Query: 152 KFDEPIEC-FNESDLGKNLYSG--------KTFLSAPLPTWQLIGRSFVISKSLN----- 197 P + + DLG G + +S P +IGR+ V+ + + Sbjct: 68 NHGAPGDTDRHVGDLGNVTAEGGVAQFKITDSLISLKGPN-SIIGRTAVVHEKADDLGKG 126 Query: 198 -HPENEPSSVKDYSF-LGVIARS 218 + E+ + GVI S Sbjct: 127 GNDESLKTGNAGGRLACGVIGYS 149 >2MP3-A nrPDB Length = 132 Score = 65.9 bits (159), Expect = 2e-11, Method: Composition-based stats. Identities = 28/117 (23%), Positives = 46/117 (39%), Gaps = 15/117 (12%) Query: 95 KKDTAVRGLARIVQVGENKTL-FDITVNGVPEAGNYHASIHEKGDVSKGVESTGKVWH-- 151 K D V+G+ Q N + ++ G+ E G + +HE GD + G S G ++ Sbjct: 16 KGDGPVQGIINFEQKESNGPVKVWGSIKGLTE-GLHGFHVHEFGDNTAGCTSAGPHFNPL 74 Query: 152 --KFDEPIE-CFNESDLGK--NLYSGKTFLSAPLPTWQL------IGRSFVISKSLN 197 K P + + DLG G +S L IGR+ V+ + + Sbjct: 75 SRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKAD 131 >3CE1-A nrPDB Length = 168 Score = 64.0 bits (154), Expect = 5e-11, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 46/143 (32%), Gaps = 21/143 (14%) Query: 95 KKDTAVRGLARIVQVGENKTL-FDITVNGVPEAGNYHASIHEKGDVSKGVESTGKVWHKF 153 K D+ V+G+ Q + + + +H+ GD S G S G ++ Sbjct: 12 KGDSPVQGVITFTQESSGGPVTVSGEIKNMDANAQRGFHVHQFGDNSNGCTSAGPHFNPT 71 Query: 154 -----DEPIECFNESDLGKNLYSGKTFLSAPLPTWQL--------IGRSFVISKSL---- 196 D E + DLG + QL IGR+ VI Sbjct: 72 GTNHGDRTAEVRHVGDLGNVKTDASGVAKVQISDSQLSLVGPHSIIGRTIVIHAGEDDLG 131 Query: 197 --NHPENEPSSVKDYS-FLGVIA 216 +HPE+ + GVI Sbjct: 132 KTDHPESLKTGNAGARSACGVIG 154 >1F1A-A nrPDB Length = 154 Score = 56.3 bits (134), Expect = 1e-08, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 48/144 (33%), Gaps = 23/144 (15%) Query: 95 KKDTAVRGLARIVQVGE-NKTLFDITVNGVPEAGNYHASIHEKGDVSKGVESTGKVWH-- 151 K D V G+ + Q E T + G I E GD + G S G ++ Sbjct: 9 KGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIQEFGDATNGCVSAGPHFNPF 68 Query: 152 --KFDEPIE-CFNESDLG--KNLYSG-------KTFLSAPLPTWQLIGRSFVISKSLNH- 198 P + + D+G K +G + + PT ++GRS VI + Sbjct: 69 KKTHGAPTDEVRHVGDMGNVKTDENGVAKGSFKDSLIKLIGPT-SVVGRSVVIHAGQDDL 127 Query: 199 -----PENEPSSVKDYS-FLGVIA 216 E+ + GVI Sbjct: 128 GKGDTEESLKTGNAGPRPACGVIG 151 >3L9Y-A nrPDB Length = 154 Score = 55.5 bits (132), Expect = 2e-08, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 47/141 (33%), Gaps = 23/141 (16%) Query: 98 TAVRGLARIVQVGENK-TLFDITVNGVPEAGNYHASIHEKGDVSKGVESTGKVWH----K 152 V G Q E + V G+ + G + +HE GD + G S G ++ Sbjct: 11 GDVSGTVFFDQQDEKSPVVVSGEVQGLTK-GKHGFHVHEFGDNTNGCTSAGAHFNPEKQD 69 Query: 153 FDEPIEC-FNESDLGKNLY---SGKTFLSAPLPTWQL------IGRSFVISKSLN----- 197 P + DLG +G T +S L IGR+ V+ + Sbjct: 70 HGGPSSAVRHVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGLG 129 Query: 198 -HPENEPSSVKDYSF-LGVIA 216 + ++ + GVI Sbjct: 130 GNELSKTTGNAGGRIACGVIG 150 >2JLP-A nrPDB Length = 222 Score = 53.2 bits (126), Expect = 1e-07, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 61/166 (36%), Gaps = 21/166 (12%) Query: 77 NSSAVAILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDI-TVNGVPEAGN---YHAS 132 + + A + T+D + V G+ Q+ L + G P N Sbjct: 38 DGTLHAACQVQPSATLDAAQP-RVTGVVLFRQLAPRAKLDAFFALEGFPTEPNSSSRAIH 96 Query: 133 IHEKGDVSKGVESTGKVWHKFDEPIECFNESDLGK------NLYSGKTFLSAPLP-TWQL 185 +H+ GD+S+G ESTG ++ P + D G +L+ + L+A L + Sbjct: 97 VHQFGDLSQGCESTGPHYNPLAVP-HPQHPGDFGNFAVRDGSLWRYRAGLAASLAGPHSI 155 Query: 186 IGRSFVISKSLN------HPENEPSSVKDYSF--LGVIARSAGVWE 223 +GR+ V+ + + + + V G+WE Sbjct: 156 VGRAVVVHAGEDDLGRGGNQASVENGNAGRRLACCVVGVCGPGLWE 201 >2ROG-A nrPDB Length = 66 Score = 45.9 bits (107), Expect = 2e-05, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 25/54 (46%) Query: 15 MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDA 68 M C +CV + LK VPG+ + +E+ VE + P ++ + G A Sbjct: 9 MTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVEEEGYKA 62 >4A48-A nrPDB Length = 69 Score = 41.6 bits (96), Expect = 3e-04, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%) Query: 15 MHCENCVNDIKACLKNVPGINS--LNFDIEQQIMSVESSVAPSTIINTLRNCGKDA 68 M C +C + I+ + VPG+ S +NF +EQ ++S P + + + G A Sbjct: 11 MDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHA 66 >5VDF-A nrPDB Length = 73 Score = 41.6 bits (96), Expect = 3e-04, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 11 YAIPMHCENCVNDIKACLKNV-PGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKD 67 + + M C C + L + P ++ ++ +E+Q++ V +++ I+ ++ GK+ Sbjct: 9 FNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKE 66 >1U3N-A nrPDB Length = 162 Score = 36.2 bits (82), Expect = 0.013, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 53/162 (32%), Gaps = 27/162 (16%) Query: 87 FQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVNGVPEAGNYHASIHEKGD-VSKGVES 145 F + ++ G I + + I+ N + + I+EKG V ES Sbjct: 7 FGHHVQLVNREGKAVGFIEIKESDDEGLDIHISANSLRPGASLGFHIYEKGSCVRPDFES 66 Query: 146 TGKVW------HKFDEPIECFNESDLGKNL--YSGKT--FLSAP---------LPTWQLI 186 G + H F+ P+ + DL GK ++AP L Sbjct: 67 AGGPFNPLNKEHGFNNPM-GHHAGDLPNLEVGADGKVDVIMNAPDTSLKKGSKLNILDED 125 Query: 187 GRSFVISKSLNHPENEPSSVKDYSF-LGVIARSAGVWENNKQ 227 G +F+I + + PS G + + N KQ Sbjct: 126 GSAFIIHEQADDYLTNPSGNSGARIVCGAL-----LGNNEKQ 162 >1OQ6-A nrPDB Length = 76 Score = 35.5 bits (80), Expect = 0.020, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 3/61 (4%) Query: 15 MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSV---ESSVAPSTIINTLRNCGKDAIIR 71 M C C I+ LK +PG+ N ++ + ++V + + I + G +I Sbjct: 15 MTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVVIE 74 Query: 72 G 72 G Sbjct: 75 G 75 >6FLH-A nrPDB Length = 118 Score = 34.7 bits (78), Expect = 0.043, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 41/132 (31%), Gaps = 35/132 (26%) Query: 95 KKDTAVRGLARIVQVGENKTL-FDITVNGVPEAGNYHASIHEKGDVSKGVESTGKVWHKF 153 K D V+G+ Q N + ++ G+ E G + +HE+G Sbjct: 9 KGDGPVQGIINFEQKESNGPVKVWGSIKGLTE-GLHGFHVHEEG---------------- 51 Query: 154 DEPIECFNESDLGK--NLYSGKTFLSAPLPTWQL------IGRSFVISKSLNHPENEPSS 205 + DLG G +S L IGR+ V+ + + + Sbjct: 52 -----AGHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKAD---DGAGG 103 Query: 206 VKDYSFL-GVIA 216 GVI Sbjct: 104 NAGSRLASGVIG 115 >2GA7-A nrPDB Length = 90 Score = 34.3 bits (77), Expect = 0.052, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 5/63 (7%) Query: 4 NDTYEATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSV---ESSVAPSTIIN 59 ND+ AT+ I MHC++CV++I++ L + ++S+ +E + V SSV P ++ Sbjct: 1 NDS-TATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRK 59 Query: 60 TLR 62 + Sbjct: 60 AIE 62 >4N5A-A nrPDB Length = 557 Score = 33.9 bits (76), Expect = 0.069, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 3/77 (3%) Query: 71 RGAGKPNSSAVAILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVNGVPEAGNY- 129 + A + +V L+++ T K + ++R L R +Q NK L + NG+P Y Sbjct: 233 KAAEDNHDLSVKALQSYFNTTETDKLNLSIRTLLRCLQSTPNKELLEFVCNGIPVQLRYI 292 Query: 130 --HASIHEKGDVSKGVE 144 + + D K V Sbjct: 293 VILLLVRQLSDKDKNVN 309 >2AW0-A nrPDB Length = 72 Score = 33.1 bits (74), Expect = 0.11, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 3/59 (5%) Query: 15 MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESS---VAPSTIINTLRNCGKDAII 70 M C +CV I+ + PG+ S+ + +VE +P T+ + + G DA + Sbjct: 12 MTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATL 70 >6A72-A nrPDB Length = 72 Score = 32.8 bits (73), Expect = 0.15, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 15 MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSV---ESSVAPSTIINTLRNCGKDA 68 M C +CV+ I+ + + G+ ++ + + +V + ++P + + + G +A Sbjct: 12 MTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIEDMGFEA 68 >2L3M-A nrPDB Length = 71 Score = 32.8 bits (73), Expect = 0.16, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 15 MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSV---ESSVAPSTIINTLRNCGKD 67 M C +CVN I++ +K + G+ + + + + V S V I+ + + G D Sbjct: 14 MSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGYD 69 >2KT3-A nrPDB Length = 69 Score = 32.8 bits (73), Expect = 0.17, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 4/62 (6%) Query: 15 MHCENCVNDIKACLKNVPGINSLNFDIEQ---QIMSVESSVAPSTIINTLRNCGKDAIIR 71 M C++C +K L+ VPG+ S + Q+ V + +P + + G A + Sbjct: 9 MTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGT-SPDALTAAVAGLGYKATLA 67 Query: 72 GA 73 A Sbjct: 68 DA 69 >1KVJ-A nrPDB Length = 79 Score = 32.0 bits (71), Expect = 0.22, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 3/59 (5%) Query: 15 MHCENCVNDIKACLKNVPGINSLNFDIEQQ---IMSVESSVAPSTIINTLRNCGKDAII 70 M C +CV I+ + V G++ + +E++ I+ P T+ + + G DA+I Sbjct: 17 MTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVI 75 >2N7Y-A nrPDB Length = 76 Score = 32.0 bits (71), Expect = 0.23, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 3/59 (5%) Query: 15 MHCENCVNDIKACLKNVPGINSLNFDIEQ---QIMSVESSVAPSTIINTLRNCGKDAII 70 M C++CV I+ + N+ GI S+ +EQ + V S V + + + + G +A I Sbjct: 16 MTCQSCVKSIEDRISNLKGIISMKVSLEQGSATVKYVPSVVCLQQVCHQIGDMGFEASI 74 >2ROP-A nrPDB Length = 202 Score = 32.0 bits (71), Expect = 0.26, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 15 MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSV---ESSVAPSTIINTLRNCGKDA 68 M C +CV+ I+ + + G+ ++ + + +V + ++P + + + G +A Sbjct: 131 MTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIEDMGFEA 187 Score = 31.2 bits (69), Expect = 0.48, Method: Composition-based stats. Identities = 10/35 (28%), Positives = 21/35 (60%) Query: 15 MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVE 49 MHC++CV +I+ + + G+ S+ +E + V+ Sbjct: 29 MHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVK 63 >4Y2I-A nrPDB Length = 65 Score = 31.6 bits (70), Expect = 0.30, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 24/51 (47%) Query: 15 MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCG 65 M C C + +K + + ++ D +++ VE+S++ I L+ G Sbjct: 9 MTCGGCASTVKKTILTLDANATVRTDPATRLVDVETSLSAEQIAAALQKAG 59 >1ESO-A nrPDB Length = 154 Score = 31.2 bits (69), Expect = 0.38, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 37/112 (33%), Gaps = 22/112 (19%) Query: 126 AGNYHASIHEKGDV--------SKGVESTGKVWH-----KFDEPIECFNESDLGKNLY-- 170 G + IH KG + ES G K + P + DL + Sbjct: 42 PGEHGFHIHAKGSCQPATKDGKASAAESAGGHLDPQNTGKHEGPEGAGHLGDLPALVVNN 101 Query: 171 SGK---TFLSAPLPTWQLI-GRSFVISKSLNH--PENEPSSVKDYSF-LGVI 215 GK ++ L + I ++ ++ ++ + +P + GVI Sbjct: 102 DGKATDAVIAPRLKSLDEIKDKALMVHVGGDNMSDQPKPLGGGGERYACGVI 153 >2LQB-A nrPDB Length = 76 Score = 31.2 bits (69), Expect = 0.41, Method: Composition-based stats. Identities = 11/60 (18%), Positives = 29/60 (48%), Gaps = 3/60 (5%) Query: 15 MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESS---VAPSTIINTLRNCGKDAIIR 71 M C++CV+ I+ ++ + G+ + + Q + + P + + + + G +A I+ Sbjct: 16 MTCQSCVSSIEGKVRKLQGVVRVKVSLSNQEAVITYQPYLIQPEDLRDHVNDMGFEAAIK 75 >4N3U-A nrPDB Length = 159 Score = 30.8 bits (68), Expect = 0.51, Method: Composition-based stats. Identities = 11/78 (14%), Positives = 30/78 (38%), Gaps = 2/78 (2%) Query: 82 AILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVNGVP-EAGNYHASIHEKG-DV 139 A++ ++ + + G + + + G+P + G + +HEK Sbjct: 2 AMVSPSLIAKFEKTSKSNIEGTIKFTPANNGTVSVSVDLKGLPSDIGPFPYHVHEKPVPA 61 Query: 140 SKGVESTGKVWHKFDEPI 157 SK +T ++ ++ + Sbjct: 62 SKNCSATENHFNPYNGTV 79 >1YAI-A nrPDB Length = 151 Score = 30.8 bits (68), Expect = 0.58, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 38/113 (33%), Gaps = 24/113 (21%) Query: 126 AGNYHASIHEKGDVSKGVESTGK--------------VWHKFDEP-IECFNESDL----- 165 G + IH+ G + E GK +K P + ++ DL Sbjct: 39 PGMHGFHIHQNGSCASS-EKDGKVVLGGAAGGHYDPEHTNKHGFPWTDDNHKGDLPALFV 97 Query: 166 GKNLYSGKTFLSAPLPTWQLIGRSFVISKSLNHPENEPSSVKD---YSFLGVI 215 N + L+ L +L G + +I ++ + P ++ GVI Sbjct: 98 SANGLATNPVLAPRLTLKELKGHAIMIHAGGDNHSDMPKALGGGGARVACGVI 150 >1Z9P-A nrPDB Length = 155 Score = 30.4 bits (67), Expect = 0.64, Method: Composition-based stats. Identities = 26/115 (22%), Positives = 38/115 (33%), Gaps = 29/115 (25%) Query: 127 GNYHASIHEK---------GDVSKGVESTGKVW-----HKFDEP-IECFNESDLGK---- 167 G + IHEK G + G+ + G W K P + + DL Sbjct: 43 GLHGFHIHEKPSCEPKEKDGKLVAGLGA-GGHWDPKQTQKHGYPWSDDAHMGDLPALFVM 101 Query: 168 NLYSGKTFLSAPL--PTWQLIGRSFVI----SKSLNHPENEPSSVKDYSF-LGVI 215 + S T + AP ++ G S +I +HP P GVI Sbjct: 102 HDGSATTPVLAPRLKKLAEVKGHSLMIHAGGDNHSDHP--APLGGGGPRMACGVI 154 >1Z9N-A nrPDB Length = 177 Score = 30.4 bits (67), Expect = 0.66, Method: Composition-based stats. Identities = 26/115 (22%), Positives = 38/115 (33%), Gaps = 29/115 (25%) Query: 127 GNYHASIHEK---------GDVSKGVESTGKVW-----HKFDEP-IECFNESDLGK---- 167 G + IHEK G + G+ + G W K P + + DL Sbjct: 65 GLHGFHIHEKPSCEPKEKDGKLVAGLGA-GGHWDPKQTQKHGYPWSDDAHMGDLPALFVM 123 Query: 168 NLYSGKTFLSAPL--PTWQLIGRSFVI----SKSLNHPENEPSSVKDYSF-LGVI 215 + S T + AP ++ G S +I +HP P GVI Sbjct: 124 HDGSATTPVLAPRLKKLAEVKGHSLMIHAGGDNHSDHP--APLGGGGPRMACGVI 176 >2RML-A nrPDB Length = 147 Score = 30.4 bits (67), Expect = 0.74, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 17/34 (50%) Query: 15 MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSV 48 M C C I+ LK +PG+ N ++ + +V Sbjct: 15 MTCAACAARIEKGLKRMPGVTDANVNLATETSNV 48 >3KJP-A nrPDB Length = 299 Score = 30.1 bits (66), Expect = 1.0, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 7/41 (17%) Query: 165 LGKNLYSGKTFL-------SAPLPTWQLIGRSFVISKSLNH 198 LGK G +FL P P+W+++ + V+ L+H Sbjct: 169 LGKAEVDGASFLLKVWDGTRTPFPSWRVLIQDLVLEGDLSH 209 >4A47-A nrPDB Length = 63 Score = 29.7 bits (65), Expect = 1.3, Method: Composition-based stats. Identities = 7/53 (13%), Positives = 24/53 (45%) Query: 15 MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKD 67 M C +C + ++N ++ D+ + +++ S++ + + + G + Sbjct: 9 MDCTSCAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGHE 61 >1FVQ-A nrPDB Length = 72 Score = 29.3 bits (64), Expect = 1.7, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 25/55 (45%), Gaps = 2/55 (3%) Query: 15 MHCENCVNDIKACLKNVPGINSLNFDI--EQQIMSVESSVAPSTIINTLRNCGKD 67 M C C N I L+ + G+ + + + ++ ++ V +I + +CG D Sbjct: 11 MTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFD 65 >2EW9-A nrPDB Length = 149 Score = 28.9 bits (63), Expect = 2.1, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 29/59 (49%), Gaps = 3/59 (5%) Query: 15 MHCENCVNDIKACLKNVPGINSLNFDI---EQQIMSVESSVAPSTIINTLRNCGKDAII 70 M C +CV++I+ L+ G+ S+ + + +I + P I +++ G +A + Sbjct: 13 MTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAV 71 >1Q8L-A nrPDB Length = 84 Score = 28.9 bits (63), Expect = 2.2, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 26/62 (41%), Gaps = 6/62 (9%) Query: 15 MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAG 74 M C +C + I+ + + G+ + ++ Q E+++ + ++ K I G Sbjct: 18 MTCHSCTSTIEGKIGKLQGVQRIKVSLDNQ----EATIVYQPHLISVEEMKKQ--IEAMG 71 Query: 75 KP 76 P Sbjct: 72 FP 73 >1K0V-A nrPDB Length = 73 Score = 28.9 bits (63), Expect = 2.2, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Query: 15 MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVE---SSVAPSTIINTLRNCGKD 67 M C++CV ++ + + G+++++ ++E + V V+ I + + + G D Sbjct: 11 MSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYD 66 >1S6U-A nrPDB Length = 76 Score = 28.9 bits (63), Expect = 2.2, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 26/62 (41%), Gaps = 6/62 (9%) Query: 15 MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAG 74 M C +C + I+ + + G+ + ++ Q E+++ + ++ K I G Sbjct: 12 MTCHSCTSTIEGKIGKLQGVQRIKVSLDNQ----EATIVYQPHLISVEEMKKQ--IEAMG 65 Query: 75 KP 76 P Sbjct: 66 FP 67 >2BMA-A nrPDB Length = 470 Score = 28.1 bits (61), Expect = 3.6, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 34/70 (48%) Query: 137 GDVSKGVESTGKVWHKFDEPIECFNESDLGKNLYSGKTFLSAPLPTWQLIGRSFVISKSL 196 GD+ G G ++ ++ + + FN + GKN+ G + L + L+ + KSL Sbjct: 187 GDIGVGGREIGYLYGQYKKIVNSFNGTLTGKNVKWGGSNLRVEATGYGLVYFVLEVLKSL 246 Query: 197 NHPENEPSSV 206 N P + ++V Sbjct: 247 NIPVEKQTAV 256 >1YG0-A nrPDB Length = 66 Score = 27.0 bits (58), Expect = 7.1, Method: Composition-based stats. Identities = 8/32 (25%), Positives = 21/32 (65%), Gaps = 1/32 (3%) Query: 8 EATYAIP-MHCENCVNDIKACLKNVPGINSLN 38 +AT+ +P + C +CV+ I+ + + G++ ++ Sbjct: 2 KATFQVPSITCNHCVDKIEKFVGEIEGVSFID 33 >4LVQ-A nrPDB Length = 376 Score = 27.0 bits (58), Expect = 7.3, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 20/52 (38%), Gaps = 1/52 (1%) Query: 64 CGKDAIIRGAGKPNSSAVAILETFQKYTIDQKKDTA-VRGLARIVQVGENKT 114 CG D + G G A A ++ K T+ TA + R V V E Sbjct: 23 CGNDDNVTGGGATTGQASAKVDCGGKKTLKASGSTAQANAMTRFVNVFEQAC 74 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.307 0.131 0.353 Lambda K H 0.267 0.0402 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,489,921 Number of Sequences: 36641 Number of extensions: 373369 Number of successful extensions: 733 Number of sequences better than 10.0: 63 Number of HSP's better than 10.0 without gapping: 58 Number of HSP's successfully gapped in prelim test: 32 Number of HSP's that attempted gapping in prelim test: 655 Number of HSP's gapped (non-prelim): 94 length of query: 249 length of database: 10,336,785 effective HSP length: 95 effective length of query: 154 effective length of database: 6,855,890 effective search space: 1055807060 effective search space used: 1055807060 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.6 bits) S2: 58 (27.0 bits)