BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= P40090
         (624 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

5W94-A nrPDB                                                         1294   0.0  
5C6G-A nrPDB                                                          301   8e-82
6FDN-A nrPDB                                                           33   0.49 
6G18-v nrPDB                                                           32   1.0  
3LNC-A nrPDB                                                           31   1.7  
1U1U-A nrPDB                                                           30   2.1  
1XMD-A nrPDB                                                           29   4.9  

>5W94-A nrPDB
          Length = 624

 Score = 1294 bits (3349), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/624 (100%), Positives = 624/624 (100%)

Query: 1   MENLGDKLSISQVYHLAQEYRDHAYSIANKIGSEEGLKQYYGLMNMSIQMFQLLKTKCTL 60
           MENLGDKLSISQVYHLAQEYRDHAYSIANKIGSEEGLKQYYGLMNMSIQMFQLLKTKCTL
Sbjct: 1   MENLGDKLSISQVYHLAQEYRDHAYSIANKIGSEEGLKQYYGLMNMSIQMFQLLKTKCTL 60

Query: 61  SVLEDSKVTFEMVELLIQETYNFDLAELYISSLKERLQTHQSDTDLVEEIMRCEFLLLHD 120
           SVLEDSKVTFEMVELLIQETYNFDLAELYISSLKERLQTHQSDTDLVEEIMRCEFLLLHD
Sbjct: 61  SVLEDSKVTFEMVELLIQETYNFDLAELYISSLKERLQTHQSDTDLVEEIMRCEFLLLHD 120

Query: 121 LPLMRDSKFHYKIALRNCNELVQYMVNLQDELYQNWASVFQYVGVMLCIKLKQHRRVKTS 180
           LPLMRDSKFHYKIALRNCNELVQYMVNLQDELYQNWASVFQYVGVMLCIKLKQHRRVKTS
Sbjct: 121 LPLMRDSKFHYKIALRNCNELVQYMVNLQDELYQNWASVFQYVGVMLCIKLKQHRRVKTS 180

Query: 181 FHGLLSQCREKSQWKWFLNLCYVNYLLNERFPIPEDALQELRSTELHTVGPELYAWKLAL 240
           FHGLLSQCREKSQWKWFLNLCYVNYLLNERFPIPEDALQELRSTELHTVGPELYAWKLAL
Sbjct: 181 FHGLLSQCREKSQWKWFLNLCYVNYLLNERFPIPEDALQELRSTELHTVGPELYAWKLAL 240

Query: 241 EMVIQLCKDGNITDHLNEFKNFFDTNKQSLVTNEGKGCVIKIMPRIALKVELPMIFHYKE 300
           EMVIQLCKDGNITDHLNEFKNFFDTNKQSLVTNEGKGCVIKIMPRIALKVELPMIFHYKE
Sbjct: 241 EMVIQLCKDGNITDHLNEFKNFFDTNKQSLVTNEGKGCVIKIMPRIALKVELPMIFHYKE 300

Query: 301 LKNILLLLQSVSYIVNCYDEKGNFSRKFLPKVYSTTQKLIKNIAAGGVSMNELDSRIQTY 360
           LKNILLLLQSVSYIVNCYDEKGNFSRKFLPKVYSTTQKLIKNIAAGGVSMNELDSRIQTY
Sbjct: 301 LKNILLLLQSVSYIVNCYDEKGNFSRKFLPKVYSTTQKLIKNIAAGGVSMNELDSRIQTY 360

Query: 361 KSILEFCEFYKVWEQTLLKGAVVTTESPKLGPSPGYVRLLQAMKVQFEGGGAVEEYTRLA 420
           KSILEFCEFYKVWEQTLLKGAVVTTESPKLGPSPGYVRLLQAMKVQFEGGGAVEEYTRLA
Sbjct: 361 KSILEFCEFYKVWEQTLLKGAVVTTESPKLGPSPGYVRLLQAMKVQFEGGGAVEEYTRLA 420

Query: 421 QSGGTSSEVKMISLLNCYTVQAARVSRCSGDKQGELVEQCNKVWLQVEKLLQETDLQFNP 480
           QSGGTSSEVKMISLLNCYTVQAARVSRCSGDKQGELVEQCNKVWLQVEKLLQETDLQFNP
Sbjct: 421 QSGGTSSEVKMISLLNCYTVQAARVSRCSGDKQGELVEQCNKVWLQVEKLLQETDLQFNP 480

Query: 481 IWECTVTILWLFSHFEPFSWNPLPCSDKQRAEYVSKLREFYSSNKFVAGEAVADNRFKLK 540
           IWECTVTILWLFSHFEPFSWNPLPCSDKQRAEYVSKLREFYSSNKFVAGEAVADNRFKLK
Sbjct: 481 IWECTVTILWLFSHFEPFSWNPLPCSDKQRAEYVSKLREFYSSNKFVAGEAVADNRFKLK 540

Query: 541 KALLLQILVNYLGGRMLEHDLGEIYAISAKCFDMCRQQGGMRKVQYVIGIWHLMNCTVAM 600
           KALLLQILVNYLGGRMLEHDLGEIYAISAKCFDMCRQQGGMRKVQYVIGIWHLMNCTVAM
Sbjct: 541 KALLLQILVNYLGGRMLEHDLGEIYAISAKCFDMCRQQGGMRKVQYVIGIWHLMNCTVAM 600

Query: 601 RGKDVALTNAKLEALVKQITSVKQ 624
           RGKDVALTNAKLEALVKQITSVKQ
Sbjct: 601 RGKDVALTNAKLEALVKQITSVKQ 624


>5C6G-A nrPDB
          Length = 620

 Score =  301 bits (770), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 217/620 (35%), Positives = 338/620 (54%), Gaps = 30/620 (4%)

Query: 13  VYHLAQEYRDHAYSIANKIGSEEGLKQYYGLMNMSIQMFQLLKTKCTLSVLEDSKVTFEM 72
           VY L+Q+Y   A  +A  + SE+ L+QYY L+   +   + +K    L+V ED +VT ++
Sbjct: 15  VYRLSQQYLAAARDLAADVRSEKQLQQYYTLVRQCVHGLRYVKDGFQLTVEEDIQVTLQL 74

Query: 73  VELLIQETYNFDLAELYISSLKERLQTHQSDTDLVEEIMRCEFLLLHDLPLMRDSKFHYK 132
             +L++ET+  +LAE Y+ SL+ RL+T    T L +     EF LL+D+PL ++ +   +
Sbjct: 75  ARVLLEETHEVELAEQYLGSLRTRLRT----TPLTDARHAVEFQLLYDVPLAKEDRAELR 130

Query: 133 IALRNCNELVQYMVNLQDELYQNWASVFQYVGV--MLCIKLKQHRRVKTSFHGLLSQCRE 190
             +R+   L++ + +        WA +F+Y  +  +     + +  V   +  LL     
Sbjct: 131 QVVRHTTGLLEELAD-----SDAWAWLFRYCRIIGLEAGGARSNSAVLQEYLKLLQLVSA 185

Query: 191 KSQWKWFLNLCY-VNYLLNERFPIPEDALQELRS-TELHTVGP-ELYAWKLALEMVIQLC 247
                    LC  V ++L+    +    L +LR+  +  T  P +L  W L L++++ + 
Sbjct: 186 GPVGLHAFVLCSCVAFILDRVVELDRSLLTQLRALRKAGTAIPLQLQMWSLLLDLLVAIQ 245

Query: 248 KDGNITDHLNEFKNFFDTNKQSLVTNEGKGCVIKIMPRIALKVELPMIFHYKELKNILLL 307
            D NI D L +FK+FF T+K +L   +    V+ I   + +++ +P+ F+Y + KNILLL
Sbjct: 246 LDENIMDLLTDFKDFFSTHKDALKDGDDT-VVLSIKEGVNVRLFVPL-FNYHDCKNILLL 303

Query: 308 LQSVSYIVNCYDEKGNFSRKFLPKVYSTTQKLIKNIAAGGVSMNELDSRIQTYKSILEFC 367
            QSVSY+  CY +  NFS KFLPKV  T+Q+L K       S+  + S    Y  +++ C
Sbjct: 304 FQSVSYLTTCYSKSSNFSTKFLPKVLKTSQEL-KETLQKRTSLVHVQSIRNIYDKVVDLC 362

Query: 368 EFYKVWEQTLLKGAVVTTESPKLGPSPGYVRLLQAMKVQFEGGGAVEEYTRLAQSGGTS- 426
            FY+ WE +L+    V    P+L  S  Y  LL+A+  Q      +    RL  +   S 
Sbjct: 363 RFYQTWE-SLILSERVEGGIPRLQYSE-YNILLEAISSQQAQQADLSHVGRLYSTLTKSK 420

Query: 427 -SEVKMISLLNCYTVQAARVSRCSGDKQG--ELVEQCNKVWLQVEKLLQETDLQFNPIWE 483
             E+++I + + YT+  A +S CS   +G  EL ++    W Q++     + L  N +W+
Sbjct: 421 DPELRLIGIAHLYTLIVAELSSCSEGPEGISELTQKTTDAWEQLQHAYLSSSLVQNNVWK 480

Query: 484 CTVTILWLFSHFEPFSWNPL-PCSDKQRAEYVSKLREFYSSNKFVAG-EAVADNRFKLKK 541
           C+V ILW  S FEPFS +P+   S+ Q+  Y+ +L EF++ N  V   EAV    FKLKK
Sbjct: 481 CSVAILWAISRFEPFSGHPIHSSSNDQQTLYMQQLNEFFTDNALVGTPEAVPAKDFKLKK 540

Query: 542 ALLLQILVNYLGGRMLEHDLGEIYAISAKCFDMCRQQ--GGMRKVQYVIGIWHLMNCTVA 599
           +LLL  L+NYLGG ML  D+ +   IS+ CF M +QQ   GMR   YV GIWHLMN TVA
Sbjct: 541 SLLLHFLLNYLGGTMLVSDVQKRCDISSSCFQMGKQQYMPGMR---YVAGIWHLMNSTVA 597

Query: 600 MRGKDVALTNAKLEALVKQI 619
           M+ K+VA+T AKLE LV ++
Sbjct: 598 MKTKEVAITRAKLEGLVDKM 617


>6FDN-A nrPDB
          Length = 320

 Score = 32.7 bits (73), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 22/116 (18%)

Query: 171 LKQHRRVKTSFHGL-----LSQCREKSQWKWFLNL------CYVNYLLNERFPIPED--- 216
           LK HR  +TSF  L       + R    W +   L       Y+  L   +FP+P+    
Sbjct: 122 LKLHRLGRTSFRNLKNKRDYHKHRHNVSWLYLSRLSAMKEFAYMKALYERKFPVPKPIDY 181

Query: 217 ----ALQELRST----ELHTVGPELYAWKLALEMVIQLCKDGNITDHLNEFKNFFD 264
                + EL +     ++H V      +  A+E++++L   G I    NEF    D
Sbjct: 182 NRHAVVMELINGYPLCQIHHVEDPASVYDEAMELIVKLANHGLIHGDFNEFNLILD 237


>6G18-v nrPDB
          Length = 552

 Score = 31.6 bits (70), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 22/116 (18%)

Query: 171 LKQHRRVKTSFHGLLSQ-----CREKSQWKWFLNL------CYVNYLLNERFPIPED--- 216
           LK HR  +TSF  L ++      R    W +   L       Y+  L   +FP+P+    
Sbjct: 122 LKLHRLGRTSFRNLKNKRDYHKHRHNVSWLYLSRLSAMKEFAYMKALYERKFPVPKPIDY 181

Query: 217 ----ALQELRST----ELHTVGPELYAWKLALEMVIQLCKDGNITDHLNEFKNFFD 264
                + EL +     ++H V      +  A+E++++L   G I    NEF    D
Sbjct: 182 NRHAVVMELINGYPLCQIHHVEDPASVYDEAMELIVKLANHGLIHGDFNEFNLILD 237


>3LNC-A nrPDB
          Length = 231

 Score = 30.8 bits (68), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 13/37 (35%), Positives = 21/37 (56%)

Query: 241 EMVIQLCKDGNITDHLNEFKNFFDTNKQSLVTNEGKG 277
           E  ++LC +G I +H   F NF+   +++L  N  KG
Sbjct: 82  EEFLRLCSNGEIIEHAEVFGNFYGVPRKNLEDNVDKG 118


>1U1U-A nrPDB
          Length = 765

 Score = 30.4 bits (67), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 32/157 (20%)

Query: 219 QELRSTELHTVGPELYAW---KLALEMVIQLCKDGNITDHLNEFKNFFDTNKQSLVTNEG 275
           Q L +T +    P  Y +   ++ L++   + + GN +    E   +FDTN   +V    
Sbjct: 67  QVLDTTAMLGAVPPRYGYTGGEIGLDVYFSMAR-GNASVPAMEMTKWFDTNYHYIV---- 121

Query: 276 KGCVIKIMPRIALKVELPMIFH-----YKELK-----NILLLLQSVSYIVNCYDEKGNFS 325
                   P +  +V      H     YKE K      + +L+  VSY++     KG   
Sbjct: 122 --------PELGPEVNFSYASHKAVNEYKEAKALGVDTVPVLVGPVSYLLLSKAAKG-VD 172

Query: 326 RKF-----LPKVYSTTQKLIKNIAAGGVSMNELDSRI 357
           + F     LPK+    +++I  + A G +  +LD  +
Sbjct: 173 KSFELLSLLPKILPIYKEVITELKAAGATWIQLDEPV 209


>1XMD-A nrPDB
          Length = 612

 Score = 29.3 bits (64), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 14/105 (13%)

Query: 184 LLSQCREKSQW--KWFLNLCYVNYL----LNERF--PIP--EDALQELRSTELHTVGPEL 233
           LL + R K  W  +W+LN+ Y++      LN  F  P P  E        T+L      L
Sbjct: 70  LLERARGKRNWLEEWWLNVAYLDVRIPSQLNVNFVGPCPHFEHYWPAREGTQLERGSMML 129

Query: 234 YA----WKLALEMVIQLCKDGNITDHLNEFKNFFDTNKQSLVTNE 274
           +     W+L     + + K GN    +N+F+  F T K   +T +
Sbjct: 130 WHNLNYWQLLRREKLPVHKSGNTPLDMNQFRMLFSTCKVPGITRD 174


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

5W94-A nrPDB                                                         1021   0.0  
5C6G-A nrPDB                                                          811   0.0  

Sequences not found previously or not previously below threshold:

2NRJ-A nrPDB                                                           30   2.9  
3LNC-A nrPDB                                                           30   3.6  
6QKC-A nrPDB                                                           30   3.7  


CONVERGED!
>5W94-A nrPDB
          Length = 624

 Score = 1021 bits (2640), Expect = 0.0,   Method: Composition-based stats.
 Identities = 624/624 (100%), Positives = 624/624 (100%)

Query: 1   MENLGDKLSISQVYHLAQEYRDHAYSIANKIGSEEGLKQYYGLMNMSIQMFQLLKTKCTL 60
           MENLGDKLSISQVYHLAQEYRDHAYSIANKIGSEEGLKQYYGLMNMSIQMFQLLKTKCTL
Sbjct: 1   MENLGDKLSISQVYHLAQEYRDHAYSIANKIGSEEGLKQYYGLMNMSIQMFQLLKTKCTL 60

Query: 61  SVLEDSKVTFEMVELLIQETYNFDLAELYISSLKERLQTHQSDTDLVEEIMRCEFLLLHD 120
           SVLEDSKVTFEMVELLIQETYNFDLAELYISSLKERLQTHQSDTDLVEEIMRCEFLLLHD
Sbjct: 61  SVLEDSKVTFEMVELLIQETYNFDLAELYISSLKERLQTHQSDTDLVEEIMRCEFLLLHD 120

Query: 121 LPLMRDSKFHYKIALRNCNELVQYMVNLQDELYQNWASVFQYVGVMLCIKLKQHRRVKTS 180
           LPLMRDSKFHYKIALRNCNELVQYMVNLQDELYQNWASVFQYVGVMLCIKLKQHRRVKTS
Sbjct: 121 LPLMRDSKFHYKIALRNCNELVQYMVNLQDELYQNWASVFQYVGVMLCIKLKQHRRVKTS 180

Query: 181 FHGLLSQCREKSQWKWFLNLCYVNYLLNERFPIPEDALQELRSTELHTVGPELYAWKLAL 240
           FHGLLSQCREKSQWKWFLNLCYVNYLLNERFPIPEDALQELRSTELHTVGPELYAWKLAL
Sbjct: 181 FHGLLSQCREKSQWKWFLNLCYVNYLLNERFPIPEDALQELRSTELHTVGPELYAWKLAL 240

Query: 241 EMVIQLCKDGNITDHLNEFKNFFDTNKQSLVTNEGKGCVIKIMPRIALKVELPMIFHYKE 300
           EMVIQLCKDGNITDHLNEFKNFFDTNKQSLVTNEGKGCVIKIMPRIALKVELPMIFHYKE
Sbjct: 241 EMVIQLCKDGNITDHLNEFKNFFDTNKQSLVTNEGKGCVIKIMPRIALKVELPMIFHYKE 300

Query: 301 LKNILLLLQSVSYIVNCYDEKGNFSRKFLPKVYSTTQKLIKNIAAGGVSMNELDSRIQTY 360
           LKNILLLLQSVSYIVNCYDEKGNFSRKFLPKVYSTTQKLIKNIAAGGVSMNELDSRIQTY
Sbjct: 301 LKNILLLLQSVSYIVNCYDEKGNFSRKFLPKVYSTTQKLIKNIAAGGVSMNELDSRIQTY 360

Query: 361 KSILEFCEFYKVWEQTLLKGAVVTTESPKLGPSPGYVRLLQAMKVQFEGGGAVEEYTRLA 420
           KSILEFCEFYKVWEQTLLKGAVVTTESPKLGPSPGYVRLLQAMKVQFEGGGAVEEYTRLA
Sbjct: 361 KSILEFCEFYKVWEQTLLKGAVVTTESPKLGPSPGYVRLLQAMKVQFEGGGAVEEYTRLA 420

Query: 421 QSGGTSSEVKMISLLNCYTVQAARVSRCSGDKQGELVEQCNKVWLQVEKLLQETDLQFNP 480
           QSGGTSSEVKMISLLNCYTVQAARVSRCSGDKQGELVEQCNKVWLQVEKLLQETDLQFNP
Sbjct: 421 QSGGTSSEVKMISLLNCYTVQAARVSRCSGDKQGELVEQCNKVWLQVEKLLQETDLQFNP 480

Query: 481 IWECTVTILWLFSHFEPFSWNPLPCSDKQRAEYVSKLREFYSSNKFVAGEAVADNRFKLK 540
           IWECTVTILWLFSHFEPFSWNPLPCSDKQRAEYVSKLREFYSSNKFVAGEAVADNRFKLK
Sbjct: 481 IWECTVTILWLFSHFEPFSWNPLPCSDKQRAEYVSKLREFYSSNKFVAGEAVADNRFKLK 540

Query: 541 KALLLQILVNYLGGRMLEHDLGEIYAISAKCFDMCRQQGGMRKVQYVIGIWHLMNCTVAM 600
           KALLLQILVNYLGGRMLEHDLGEIYAISAKCFDMCRQQGGMRKVQYVIGIWHLMNCTVAM
Sbjct: 541 KALLLQILVNYLGGRMLEHDLGEIYAISAKCFDMCRQQGGMRKVQYVIGIWHLMNCTVAM 600

Query: 601 RGKDVALTNAKLEALVKQITSVKQ 624
           RGKDVALTNAKLEALVKQITSVKQ
Sbjct: 601 RGKDVALTNAKLEALVKQITSVKQ 624


>5C6G-A nrPDB
          Length = 620

 Score =  811 bits (2095), Expect = 0.0,   Method: Composition-based stats.
 Identities = 217/620 (35%), Positives = 338/620 (54%), Gaps = 30/620 (4%)

Query: 13  VYHLAQEYRDHAYSIANKIGSEEGLKQYYGLMNMSIQMFQLLKTKCTLSVLEDSKVTFEM 72
           VY L+Q+Y   A  +A  + SE+ L+QYY L+   +   + +K    L+V ED +VT ++
Sbjct: 15  VYRLSQQYLAAARDLAADVRSEKQLQQYYTLVRQCVHGLRYVKDGFQLTVEEDIQVTLQL 74

Query: 73  VELLIQETYNFDLAELYISSLKERLQTHQSDTDLVEEIMRCEFLLLHDLPLMRDSKFHYK 132
             +L++ET+  +LAE Y+ SL+ RL+T    T L +     EF LL+D+PL ++ +   +
Sbjct: 75  ARVLLEETHEVELAEQYLGSLRTRLRT----TPLTDARHAVEFQLLYDVPLAKEDRAELR 130

Query: 133 IALRNCNELVQYMVNLQDELYQNWASVFQYVGV--MLCIKLKQHRRVKTSFHGLLSQCRE 190
             +R+   L++ + +        WA +F+Y  +  +     + +  V   +  LL     
Sbjct: 131 QVVRHTTGLLEELAD-----SDAWAWLFRYCRIIGLEAGGARSNSAVLQEYLKLLQLVSA 185

Query: 191 KSQWKWFLNLCY-VNYLLNERFPIPEDALQELRS-TELHTVGP-ELYAWKLALEMVIQLC 247
                    LC  V ++L+    +    L +LR+  +  T  P +L  W L L++++ + 
Sbjct: 186 GPVGLHAFVLCSCVAFILDRVVELDRSLLTQLRALRKAGTAIPLQLQMWSLLLDLLVAIQ 245

Query: 248 KDGNITDHLNEFKNFFDTNKQSLVTNEGKGCVIKIMPRIALKVELPMIFHYKELKNILLL 307
            D NI D L +FK+FF T+K +L   +    V+ I   + +++ +P+ F+Y + KNILLL
Sbjct: 246 LDENIMDLLTDFKDFFSTHKDALKDGDDT-VVLSIKEGVNVRLFVPL-FNYHDCKNILLL 303

Query: 308 LQSVSYIVNCYDEKGNFSRKFLPKVYSTTQKLIKNIAAGGVSMNELDSRIQTYKSILEFC 367
            QSVSY+  CY +  NFS KFLPKV  T+Q+L K       S+  + S    Y  +++ C
Sbjct: 304 FQSVSYLTTCYSKSSNFSTKFLPKVLKTSQEL-KETLQKRTSLVHVQSIRNIYDKVVDLC 362

Query: 368 EFYKVWEQTLLKGAVVTTESPKLGPSPGYVRLLQAMKVQFEGGGAVEEYTRLAQSGGTS- 426
            FY+ WE +L+    V    P+L  S  Y  LL+A+  Q      +    RL  +   S 
Sbjct: 363 RFYQTWE-SLILSERVEGGIPRLQYSE-YNILLEAISSQQAQQADLSHVGRLYSTLTKSK 420

Query: 427 -SEVKMISLLNCYTVQAARVSRCSGDKQG--ELVEQCNKVWLQVEKLLQETDLQFNPIWE 483
             E+++I + + YT+  A +S CS   +G  EL ++    W Q++     + L  N +W+
Sbjct: 421 DPELRLIGIAHLYTLIVAELSSCSEGPEGISELTQKTTDAWEQLQHAYLSSSLVQNNVWK 480

Query: 484 CTVTILWLFSHFEPFSWNPL-PCSDKQRAEYVSKLREFYSSNKFVAG-EAVADNRFKLKK 541
           C+V ILW  S FEPFS +P+   S+ Q+  Y+ +L EF++ N  V   EAV    FKLKK
Sbjct: 481 CSVAILWAISRFEPFSGHPIHSSSNDQQTLYMQQLNEFFTDNALVGTPEAVPAKDFKLKK 540

Query: 542 ALLLQILVNYLGGRMLEHDLGEIYAISAKCFDMCRQQ--GGMRKVQYVIGIWHLMNCTVA 599
           +LLL  L+NYLGG ML  D+ +   IS+ CF M +QQ   GMR   YV GIWHLMN TVA
Sbjct: 541 SLLLHFLLNYLGGTMLVSDVQKRCDISSSCFQMGKQQYMPGMR---YVAGIWHLMNSTVA 597

Query: 600 MRGKDVALTNAKLEALVKQI 619
           M+ K+VA+T AKLE LV ++
Sbjct: 598 MKTKEVAITRAKLEGLVDKM 617


>2NRJ-A nrPDB
          Length = 346

 Score = 30.0 bits (66), Expect = 2.9,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 77/189 (40%), Gaps = 31/189 (16%)

Query: 207 LNERFPIPEDALQELRSTELHTVGPELYAWKLALEMVIQLCKDGNITDHLNEFKNFFDTN 266
           +N    +P   +Q+ ++   H V  +    K  L+ +        I ++   F N+++T 
Sbjct: 56  INGYVDLPGRIVQDQKNARAHAVTWDTKVKKQLLDTL------NGIVEYDTTFDNYYETM 109

Query: 267 KQSLVTNEGKGCVIKIMPRI-ALKVELPMIFHYKELKNILLLLQSVSYIVNCYDEKGNFS 325
            +++ T +G+     +   I  L+ E+     Y +        Q +  +    D  G+  
Sbjct: 110 VEAINTGDGE----TLKEGITDLRGEIQQNQKYAQ--------QLIEELTKLRDSIGHDV 157

Query: 326 RKFLPKVYSTTQKLIKNIAAGGVSMNELDSRIQTYKSILEFCEFYKVWEQ---TLLKGAV 382
           R F      + ++L+++I     +  + D +    + +L    +YK  E     ++KGA+
Sbjct: 158 RAF-----GSNKELLQSILKNQGADVDADQKR--LEEVLGSVNYYKQLESDGFNVMKGAI 210

Query: 383 VTTESPKLG 391
           +    P +G
Sbjct: 211 L--GLPIIG 217


>3LNC-A nrPDB
          Length = 231

 Score = 29.6 bits (65), Expect = 3.6,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 241 EMVIQLCKDGNITDHLNEFKNFFDTNKQSLVTNEGKGC 278
           E  ++LC +G I +H   F NF+   +++L  N  KG 
Sbjct: 82  EEFLRLCSNGEIIEHAEVFGNFYGVPRKNLEDNVDKGV 119


>6QKC-A nrPDB
          Length = 915

 Score = 29.6 bits (65), Expect = 3.7,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 20/53 (37%), Gaps = 7/53 (13%)

Query: 481 IWECTV-------TILWLFSHFEPFSWNPLPCSDKQRAEYVSKLREFYSSNKF 526
           IW C V        +L+L S F P+ W+     + +      +  EF   N  
Sbjct: 547 IWMCIVFAYIGVSVVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSL 599


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.318    0.135    0.366 

Lambda     K      H
   0.267   0.0414    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,803,343
Number of Sequences: 36641
Number of extensions: 886123
Number of successful extensions: 2234
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 2202
Number of HSP's gapped (non-prelim): 22
length of query: 624
length of database: 10,336,785
effective HSP length: 103
effective length of query: 521
effective length of database: 6,562,762
effective search space: 3419199002
effective search space used: 3419199002
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)