BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P39779 (259 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5LOJ-A nrPDB 518 e-147 5EY2-A nrPDB 412 e-115 5EY0-B nrPDB 335 2e-92 2B18-A nrPDB 320 3e-88 2B0L-A nrPDB 181 3e-46 5N0L-A nrPDB 135 2e-32 5JW6-A nrPDB 36 0.020 3LYL-A nrPDB 32 0.31 5OLJ-A nrPDB 32 0.36 3S27-A nrPDB 31 0.60 4KR4-A nrPDB 30 1.1 4ONJ-A nrPDB 29 1.6 1DL3-A nrPDB 29 2.5 2W25-A nrPDB 28 2.9 5T88-A nrPDB 28 4.3 2P4W-A nrPDB 28 5.2 2CWE-A nrPDB 27 7.7 >5LOJ-A nrPDB Length = 263 Score = 518 bits (1333), Expect = e-147, Method: Compositional matrix adjust. Identities = 258/258 (100%), Positives = 258/258 (100%) Query: 2 ALLQKTRIINSMLQAAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGYSINQQIENDR 61 ALLQKTRIINSMLQAAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGYSINQQIENDR Sbjct: 1 ALLQKTRIINSMLQAAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGYSINQQIENDR 60 Query: 62 MKKMLEDRQFPEEYTKNLFNVPETSSNLDINSEYTAFPVENRDLFQAGLTTIVPIIGGGE 121 MKKMLEDRQFPEEYTKNLFNVPETSSNLDINSEYTAFPVENRDLFQAGLTTIVPIIGGGE Sbjct: 61 MKKMLEDRQFPEEYTKNLFNVPETSSNLDINSEYTAFPVENRDLFQAGLTTIVPIIGGGE 120 Query: 122 RLGTLILSRLQDQFNDDDLILAEYGATVVGMEILREKAEEIEEEARSKAVVQMAISSLSY 181 RLGTLILSRLQDQFNDDDLILAEYGATVVGMEILREKAEEIEEEARSKAVVQMAISSLSY Sbjct: 121 RLGTLILSRLQDQFNDDDLILAEYGATVVGMEILREKAEEIEEEARSKAVVQMAISSLSY 180 Query: 182 SELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGTY 241 SELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGTY Sbjct: 181 SELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGTY 240 Query: 242 IKVLNNKFLIELENLKSH 259 IKVLNNKFLIELENLKSH Sbjct: 241 IKVLNNKFLIELENLKSH 258 >5EY2-A nrPDB Length = 276 Score = 412 bits (1058), Expect = e-115, Method: Compositional matrix adjust. Identities = 211/259 (81%), Positives = 242/259 (93%) Query: 1 MALLQKTRIINSMLQAAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGYSINQQIEND 60 M LL KTR +N++LQ+AAGKPVNF+EM++T+ +VI++N+FVVSRRGKLLGY+I+QQIEN+ Sbjct: 18 MELLAKTRKLNALLQSAAGKPVNFREMSDTMCEVIEANVFVVSRRGKLLGYAIHQQIENE 77 Query: 61 RMKKMLEDRQFPEEYTKNLFNVPETSSNLDINSEYTAFPVENRDLFQAGLTTIVPIIGGG 120 RMK+ML +RQFPEEYT++LFN+ ETSSNLD+NS YTAFPVENR+LF GLTTIVPI+GGG Sbjct: 78 RMKQMLAERQFPEEYTQSLFNITETSSNLDVNSAYTAFPVENRELFGQGLTTIVPIVGGG 137 Query: 121 ERLGTLILSRLQDQFNDDDLILAEYGATVVGMEILREKAEEIEEEARSKAVVQMAISSLS 180 ERLGTL+L+RL +F DDDLILAEY +TVVGMEILREKAEEIEEEARSKAVVQMAISSLS Sbjct: 138 ERLGTLVLARLGQEFLDDDLILAEYSSTVVGMEILREKAEEIEEEARSKAVVQMAISSLS 197 Query: 181 YSELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT 240 YSELEAIEHIFEEL+G EGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT Sbjct: 198 YSELEAIEHIFEELNGTEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT 257 Query: 241 YIKVLNNKFLIELENLKSH 259 YIKVLN+KFL EL LK++ Sbjct: 258 YIKVLNDKFLQELAKLKTN 276 >5EY0-B nrPDB Length = 274 Score = 335 bits (858), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 165/257 (64%), Positives = 206/257 (80%) Query: 1 MALLQKTRIINSMLQAAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGYSINQQIEND 60 M+LL KTR +N++LQ G V+FK++A+T+ V +N+F+VSRRGK+LG S+N+ +++ Sbjct: 18 MSLLSKTRELNTLLQKHKGIAVDFKDVAQTISSVTVTNVFIVSRRGKILGSSLNELLKSQ 77 Query: 61 RMKKMLEDRQFPEEYTKNLFNVPETSSNLDINSEYTAFPVENRDLFQAGLTTIVPIIGGG 120 R+ +MLE+R P EYT+ L V +T SN+DI++ T FP ENR+LF TTI PI+GGG Sbjct: 78 RIIQMLEERHIPSEYTERLMEVKQTESNIDIDNVLTVFPPENRELFIDSRTTIFPILGGG 137 Query: 121 ERLGTLILSRLQDQFNDDDLILAEYGATVVGMEILREKAEEIEEEARSKAVVQMAISSLS 180 ERLGTL+L R+ D FN++DL+L EY ATV+GMEILREK E+E+EAR KA + MAI+SLS Sbjct: 138 ERLGTLVLGRVHDDFNENDLVLGEYAATVIGMEILREKHSEVEKEARDKAAITMAINSLS 197 Query: 181 YSELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT 240 YSE EAIEHIFEEL G EGLL+ASK+ADRVGITRSVIVNALRKLESAGVIESRSLGMKGT Sbjct: 198 YSEKEAIEHIFEELGGTEGLLIASKVADRVGITRSVIVNALRKLESAGVIESRSLGMKGT 257 Query: 241 YIKVLNNKFLIELENLK 257 +IKV KFL ELE K Sbjct: 258 FIKVKKEKFLDELEKSK 274 >2B18-A nrPDB Length = 164 Score = 320 bits (821), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 155/155 (100%), Positives = 155/155 (100%) Query: 1 MALLQKTRIINSMLQAAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGYSINQQIEND 60 MALLQKTRIINSMLQAAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGYSINQQIEND Sbjct: 10 MALLQKTRIINSMLQAAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGYSINQQIEND 69 Query: 61 RMKKMLEDRQFPEEYTKNLFNVPETSSNLDINSEYTAFPVENRDLFQAGLTTIVPIIGGG 120 RMKKMLEDRQFPEEYTKNLFNVPETSSNLDINSEYTAFPVENRDLFQAGLTTIVPIIGGG Sbjct: 70 RMKKMLEDRQFPEEYTKNLFNVPETSSNLDINSEYTAFPVENRDLFQAGLTTIVPIIGGG 129 Query: 121 ERLGTLILSRLQDQFNDDDLILAEYGATVVGMEIL 155 ERLGTLILSRLQDQFNDDDLILAEYGATVVGMEIL Sbjct: 130 ERLGTLILSRLQDQFNDDDLILAEYGATVVGMEIL 164 >2B0L-A nrPDB Length = 102 Score = 181 bits (459), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 92/92 (100%), Positives = 92/92 (100%) Query: 168 SKAVVQMAISSLSYSELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESA 227 SKAVVQMAISSLSYSELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESA Sbjct: 11 SKAVVQMAISSLSYSELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESA 70 Query: 228 GVIESRSLGMKGTYIKVLNNKFLIELENLKSH 259 GVIESRSLGMKGTYIKVLNNKFLIELENLKSH Sbjct: 71 GVIESRSLGMKGTYIKVLNNKFLIELENLKSH 102 >5N0L-A nrPDB Length = 159 Score = 135 bits (340), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 74/158 (46%), Positives = 104/158 (65%), Gaps = 11/158 (6%) Query: 3 LLQKTRIINSMLQAAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGYSIN-----QQI 57 +LQKTR IN LQ + G V+F +A L DV+ SN++VVS +GK+LG +N I Sbjct: 8 VLQKTRKINKTLQTSGGSSVSFDLLAGALGDVLSSNVYVVSAKGKVLGLHLNDVQDSSVI 67 Query: 58 ENDRMKKMLEDRQFPEEYTKNLFNVPETSSNLDINSEYTAFPVENRDLFQAGLTTIVPII 117 E++ K+ ++F +EYT+N+ + ET NL+ FP E+ L + TT+VPI+ Sbjct: 68 EDEYTKQ----KKFSDEYTQNVLKIDETLENLNGEKILEIFPEEHGRLQK--YTTVVPIL 121 Query: 118 GGGERLGTLILSRLQDQFNDDDLILAEYGATVVGMEIL 155 G G+RLGTL+LSR + FNDDDL++AEY ATVVG+EIL Sbjct: 122 GSGQRLGTLVLSRYSNSFNDDDLVIAEYSATVVGLEIL 159 >5JW6-A nrPDB Length = 371 Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust. Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 6/98 (6%) Query: 121 ERLGTLILSRLQ-DQFNDDDLILAEYGATVVG---MEILREKAEEIE--EEARSKAVVQM 174 ERL L+L + DQF+D DL+ + + V G ME ++ + + R +V + Sbjct: 62 ERLSNLVLRDCRADQFSDCDLVFSGLNSDVAGEIEMEFIKAEIPVFSNAKNYRKHPLVPL 121 Query: 175 AISSLSYSELEAIEHIFEELDGNEGLLVASKIADRVGI 212 + +++ L+ I H +E +G LV + +G+ Sbjct: 122 VVPTVNPQHLDLIPHQRKEFGLKKGFLVCNSNCAVIGV 159 >3LYL-A nrPDB Length = 247 Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 3/73 (4%) Query: 142 LAEYGATVVGMEILREKAEEIEEEARSKAVVQMAISSLSYSELEAIEHIFEELDGNEGLL 201 LA GATVVG + AE+ E + K + L+ S++E+I++ F E+ L Sbjct: 25 LASKGATVVGTATSQASAEKFENSMKEKGFKARGL-VLNISDIESIQNFFAEIKAEN--L 81 Query: 202 VASKIADRVGITR 214 + + GITR Sbjct: 82 AIDILVNNAGITR 94 >5OLJ-A nrPDB Length = 723 Score = 31.6 bits (70), Expect = 0.36, Method: Compositional matrix adjust. Identities = 32/146 (21%), Positives = 63/146 (43%), Gaps = 20/146 (13%) Query: 65 MLEDRQFPEEYTKNLFNVPETSSNL--------DINSEYTAFPVENRDLFQAGLTTIVPI 116 M ED+ +PE+YT E +S + D N++ + P++ G + Sbjct: 229 MYEDKLYPEDYTYKYPKAGEKNSTVSLHLYNVADRNTKSVSLPID-----ADGYIPRIAF 283 Query: 117 IGGGERLGTLILSRLQDQFNDDDLILAEYGATVVGMEILREKAEEIEEEARSKAVVQMAI 176 + L + L+RLQ+ F + + ++V IL++ + + +A+ A Sbjct: 284 TDNADELAVMTLNRLQNDFK----MYYVHPKSLVPKLILQDMNKRYVDSDWIQALKFTAG 339 Query: 177 SSLSY-SELEAIEHIFEELDGNEGLL 201 +Y SE + HI+ L N+G++ Sbjct: 340 GGFAYVSEKDGFAHIY--LYDNKGVM 363 >3S27-A nrPDB Length = 816 Score = 30.8 bits (68), Expect = 0.60, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 17/71 (23%) Query: 169 KAVVQMAISSL-------SYSELEAIEHIFEELDG---------NEGLLVASKIADRVGI 212 K +V+ IS +Y+E A+E + +EL+G ++G LVAS +A ++G+ Sbjct: 373 KGIVRKWISRFEVWPYLETYTEDAAVE-LSKELNGKPDLIIGNYSDGNLVASLLAHKLGV 431 Query: 213 TRSVIVNALRK 223 T+ I +AL K Sbjct: 432 TQCTIAHALEK 442 >4KR4-A nrPDB Length = 341 Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust. Identities = 13/42 (30%), Positives = 25/42 (59%) Query: 148 TVVGMEILREKAEEIEEEARSKAVVQMAISSLSYSELEAIEH 189 T G R KA+ E E ++ +V++A + L Y+E+ +I++ Sbjct: 52 TGFGQWEYRTKADRAEGEQQNSNLVRLAFAGLKYAEVGSIDY 93 >4ONJ-A nrPDB Length = 357 Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust. Identities = 13/42 (30%), Positives = 27/42 (64%) Query: 26 EMAETLRDVIDSNIFVVSRRGKLLGYSINQQIENDRMKKMLE 67 E +E RD++ S ++RG L+ ++ QQ+ DR+++++E Sbjct: 261 EKSEVNRDIVRSWWEQTNQRGNLIHFNDVQQLNGDRLEQLIE 302 >1DL3-A nrPDB Length = 203 Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust. Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 20/106 (18%) Query: 137 DDDLILAEYGATVVGMEILREKAEEIEEEARSKAVVQMAISSL---------------SY 181 +D L E GA VG + I E + V++ + + SY Sbjct: 13 EDALFSVESGADYVGFVFYPKSKRYISPEDARRISVELPVERVGVFVNEEPEKILDVASY 72 Query: 182 SELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESA 227 +L A++ L G E + + KIA+R+ + ++V V+ R +E A Sbjct: 73 VQLNAVQ-----LHGEEPIELCRKIAERILVWKAVGVSNERDMERA 113 >2W25-A nrPDB Length = 150 Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust. Identities = 18/67 (26%), Positives = 35/67 (52%) Query: 184 LEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGTYIK 243 L+ I+ I +G S++A R G++ S + + +R+LES GV++ S + + Sbjct: 5 LDDIDRILVRELAADGRATLSELATRAGLSVSAVQSRVRRLESRGVVQGYSARINPEAVG 64 Query: 244 VLNNKFL 250 L + F+ Sbjct: 65 HLLSAFV 71 >5T88-A nrPDB Length = 616 Score = 28.1 bits (61), Expect = 4.3, Method: Compositional matrix adjust. Identities = 12/44 (27%), Positives = 29/44 (65%), Gaps = 2/44 (4%) Query: 33 DVIDSNIFVVSRRGKLLGYSINQQIENDRMKKMLEDRQFPEEYT 76 DV++ ++++++ GK LG I I+N ++ +++ + +FP E+ Sbjct: 244 DVVNGKLYILTKEGKGLGKII--AIKNGKIDEVIPEGEFPLEWA 285 >2P4W-A nrPDB Length = 202 Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust. Identities = 12/31 (38%), Positives = 21/31 (67%) Query: 203 ASKIADRVGITRSVIVNALRKLESAGVIESR 233 S+++ +G+ + ++ LR LE AG+IESR Sbjct: 31 VSELSRELGVGQKAVLEHLRILEEAGLIESR 61 >2CWE-A nrPDB Length = 192 Score = 26.9 bits (58), Expect = 7.7, Method: Compositional matrix adjust. Identities = 12/42 (28%), Positives = 25/42 (59%) Query: 201 LVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGTYI 242 + S++++ +G T I + + KL+ AG++E + MKG + Sbjct: 34 MTISQLSEILGKTPQTIYHHIEKLKEAGLVEVKRTEMKGNLV 75 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5LOJ-A nrPDB 400 e-112 5EY2-A nrPDB 380 e-106 5EY0-B nrPDB 374 e-104 2B18-A nrPDB 246 6e-66 5N0L-A nrPDB 190 6e-49 2B0L-A nrPDB 151 2e-37 Sequences not found previously or not previously below threshold: 5JW6-A nrPDB 32 0.29 3LYL-A nrPDB 30 0.76 3S27-A nrPDB 30 0.78 4NAR-A nrPDB 30 1.5 5OLJ-A nrPDB 29 1.7 2W25-A nrPDB 29 2.1 1DL3-A nrPDB 27 6.9 6BZS-A nrPDB 27 8.6 CONVERGED! >5LOJ-A nrPDB Length = 263 Score = 400 bits (1028), Expect = e-112, Method: Composition-based stats. Identities = 258/258 (100%), Positives = 258/258 (100%) Query: 2 ALLQKTRIINSMLQAAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGYSINQQIENDR 61 ALLQKTRIINSMLQAAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGYSINQQIENDR Sbjct: 1 ALLQKTRIINSMLQAAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGYSINQQIENDR 60 Query: 62 MKKMLEDRQFPEEYTKNLFNVPETSSNLDINSEYTAFPVENRDLFQAGLTTIVPIIGGGE 121 MKKMLEDRQFPEEYTKNLFNVPETSSNLDINSEYTAFPVENRDLFQAGLTTIVPIIGGGE Sbjct: 61 MKKMLEDRQFPEEYTKNLFNVPETSSNLDINSEYTAFPVENRDLFQAGLTTIVPIIGGGE 120 Query: 122 RLGTLILSRLQDQFNDDDLILAEYGATVVGMEILREKAEEIEEEARSKAVVQMAISSLSY 181 RLGTLILSRLQDQFNDDDLILAEYGATVVGMEILREKAEEIEEEARSKAVVQMAISSLSY Sbjct: 121 RLGTLILSRLQDQFNDDDLILAEYGATVVGMEILREKAEEIEEEARSKAVVQMAISSLSY 180 Query: 182 SELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGTY 241 SELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGTY Sbjct: 181 SELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGTY 240 Query: 242 IKVLNNKFLIELENLKSH 259 IKVLNNKFLIELENLKSH Sbjct: 241 IKVLNNKFLIELENLKSH 258 >5EY2-A nrPDB Length = 276 Score = 380 bits (977), Expect = e-106, Method: Composition-based stats. Identities = 211/259 (81%), Positives = 242/259 (93%) Query: 1 MALLQKTRIINSMLQAAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGYSINQQIEND 60 M LL KTR +N++LQ+AAGKPVNF+EM++T+ +VI++N+FVVSRRGKLLGY+I+QQIEN+ Sbjct: 18 MELLAKTRKLNALLQSAAGKPVNFREMSDTMCEVIEANVFVVSRRGKLLGYAIHQQIENE 77 Query: 61 RMKKMLEDRQFPEEYTKNLFNVPETSSNLDINSEYTAFPVENRDLFQAGLTTIVPIIGGG 120 RMK+ML +RQFPEEYT++LFN+ ETSSNLD+NS YTAFPVENR+LF GLTTIVPI+GGG Sbjct: 78 RMKQMLAERQFPEEYTQSLFNITETSSNLDVNSAYTAFPVENRELFGQGLTTIVPIVGGG 137 Query: 121 ERLGTLILSRLQDQFNDDDLILAEYGATVVGMEILREKAEEIEEEARSKAVVQMAISSLS 180 ERLGTL+L+RL +F DDDLILAEY +TVVGMEILREKAEEIEEEARSKAVVQMAISSLS Sbjct: 138 ERLGTLVLARLGQEFLDDDLILAEYSSTVVGMEILREKAEEIEEEARSKAVVQMAISSLS 197 Query: 181 YSELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT 240 YSELEAIEHIFEEL+G EGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT Sbjct: 198 YSELEAIEHIFEELNGTEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT 257 Query: 241 YIKVLNNKFLIELENLKSH 259 YIKVLN+KFL EL LK++ Sbjct: 258 YIKVLNDKFLQELAKLKTN 276 >5EY0-B nrPDB Length = 274 Score = 374 bits (960), Expect = e-104, Method: Composition-based stats. Identities = 165/257 (64%), Positives = 206/257 (80%) Query: 1 MALLQKTRIINSMLQAAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGYSINQQIEND 60 M+LL KTR +N++LQ G V+FK++A+T+ V +N+F+VSRRGK+LG S+N+ +++ Sbjct: 18 MSLLSKTRELNTLLQKHKGIAVDFKDVAQTISSVTVTNVFIVSRRGKILGSSLNELLKSQ 77 Query: 61 RMKKMLEDRQFPEEYTKNLFNVPETSSNLDINSEYTAFPVENRDLFQAGLTTIVPIIGGG 120 R+ +MLE+R P EYT+ L V +T SN+DI++ T FP ENR+LF TTI PI+GGG Sbjct: 78 RIIQMLEERHIPSEYTERLMEVKQTESNIDIDNVLTVFPPENRELFIDSRTTIFPILGGG 137 Query: 121 ERLGTLILSRLQDQFNDDDLILAEYGATVVGMEILREKAEEIEEEARSKAVVQMAISSLS 180 ERLGTL+L R+ D FN++DL+L EY ATV+GMEILREK E+E+EAR KA + MAI+SLS Sbjct: 138 ERLGTLVLGRVHDDFNENDLVLGEYAATVIGMEILREKHSEVEKEARDKAAITMAINSLS 197 Query: 181 YSELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT 240 YSE EAIEHIFEEL G EGLL+ASK+ADRVGITRSVIVNALRKLESAGVIESRSLGMKGT Sbjct: 198 YSEKEAIEHIFEELGGTEGLLIASKVADRVGITRSVIVNALRKLESAGVIESRSLGMKGT 257 Query: 241 YIKVLNNKFLIELENLK 257 +IKV KFL ELE K Sbjct: 258 FIKVKKEKFLDELEKSK 274 >2B18-A nrPDB Length = 164 Score = 246 bits (629), Expect = 6e-66, Method: Composition-based stats. Identities = 155/155 (100%), Positives = 155/155 (100%) Query: 1 MALLQKTRIINSMLQAAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGYSINQQIEND 60 MALLQKTRIINSMLQAAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGYSINQQIEND Sbjct: 10 MALLQKTRIINSMLQAAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGYSINQQIEND 69 Query: 61 RMKKMLEDRQFPEEYTKNLFNVPETSSNLDINSEYTAFPVENRDLFQAGLTTIVPIIGGG 120 RMKKMLEDRQFPEEYTKNLFNVPETSSNLDINSEYTAFPVENRDLFQAGLTTIVPIIGGG Sbjct: 70 RMKKMLEDRQFPEEYTKNLFNVPETSSNLDINSEYTAFPVENRDLFQAGLTTIVPIIGGG 129 Query: 121 ERLGTLILSRLQDQFNDDDLILAEYGATVVGMEIL 155 ERLGTLILSRLQDQFNDDDLILAEYGATVVGMEIL Sbjct: 130 ERLGTLILSRLQDQFNDDDLILAEYGATVVGMEIL 164 >5N0L-A nrPDB Length = 159 Score = 190 bits (482), Expect = 6e-49, Method: Composition-based stats. Identities = 74/159 (46%), Positives = 104/159 (65%), Gaps = 11/159 (6%) Query: 2 ALLQKTRIINSMLQAAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGYSIN-----QQ 56 +LQKTR IN LQ + G V+F +A L DV+ SN++VVS +GK+LG +N Sbjct: 7 EVLQKTRKINKTLQTSGGSSVSFDLLAGALGDVLSSNVYVVSAKGKVLGLHLNDVQDSSV 66 Query: 57 IENDRMKKMLEDRQFPEEYTKNLFNVPETSSNLDINSEYTAFPVENRDLFQAGLTTIVPI 116 IE++ K+ ++F +EYT+N+ + ET NL+ FP E+ L + TT+VPI Sbjct: 67 IEDEYTKQ----KKFSDEYTQNVLKIDETLENLNGEKILEIFPEEHGRLQK--YTTVVPI 120 Query: 117 IGGGERLGTLILSRLQDQFNDDDLILAEYGATVVGMEIL 155 +G G+RLGTL+LSR + FNDDDL++AEY ATVVG+EIL Sbjct: 121 LGSGQRLGTLVLSRYSNSFNDDDLVIAEYSATVVGLEIL 159 >2B0L-A nrPDB Length = 102 Score = 151 bits (382), Expect = 2e-37, Method: Composition-based stats. Identities = 92/92 (100%), Positives = 92/92 (100%) Query: 168 SKAVVQMAISSLSYSELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESA 227 SKAVVQMAISSLSYSELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESA Sbjct: 11 SKAVVQMAISSLSYSELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESA 70 Query: 228 GVIESRSLGMKGTYIKVLNNKFLIELENLKSH 259 GVIESRSLGMKGTYIKVLNNKFLIELENLKSH Sbjct: 71 GVIESRSLGMKGTYIKVLNNKFLIELENLKSH 102 >5JW6-A nrPDB Length = 371 Score = 31.9 bits (71), Expect = 0.29, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 6/98 (6%) Query: 121 ERLGTLILSRL-QDQFNDDDLILAEYGATVVG---MEILREKAEEIE--EEARSKAVVQM 174 ERL L+L DQF+D DL+ + + V G ME ++ + + R +V + Sbjct: 62 ERLSNLVLRDCRADQFSDCDLVFSGLNSDVAGEIEMEFIKAEIPVFSNAKNYRKHPLVPL 121 Query: 175 AISSLSYSELEAIEHIFEELDGNEGLLVASKIADRVGI 212 + +++ L+ I H +E +G LV + +G+ Sbjct: 122 VVPTVNPQHLDLIPHQRKEFGLKKGFLVCNSNCAVIGV 159 >3LYL-A nrPDB Length = 247 Score = 30.4 bits (67), Expect = 0.76, Method: Composition-based stats. Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 3/91 (3%) Query: 142 LAEYGATVVGMEILREKAEEIEEEARSKAVVQMAISSLSYSELEAIEHIFEELDGNEGLL 201 LA GATVVG + AE+ E + K + L+ S++E+I++ F E+ L Sbjct: 25 LASKGATVVGTATSQASAEKFENSMKEKGFKARGL-VLNISDIESIQNFFAEIKAEN--L 81 Query: 202 VASKIADRVGITRSVIVNALRKLESAGVIES 232 + + GITR ++ + + E VI + Sbjct: 82 AIDILVNNAGITRDNLMMRMSEDEWQSVINT 112 >3S27-A nrPDB Length = 816 Score = 30.4 bits (67), Expect = 0.78, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 10/53 (18%) Query: 180 SYSELEAIEHIFEELDG---------NEGLLVASKIADRVGITRSVIVNALRK 223 +Y+E A+E + +EL+G ++G LVAS +A ++G+T+ I +AL K Sbjct: 391 TYTEDAAVE-LSKELNGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEK 442 >4NAR-A nrPDB Length = 435 Score = 29.6 bits (65), Expect = 1.5, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 30/70 (42%) Query: 184 LEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGTYIK 243 E + + E+L + +LV RV T V N R L G+ E +L GT+ Sbjct: 16 KEGLSKLVEDLGKVKKVLVVHTDYTRVDFTHLVAKNLYRFLLERGLKEFHTLNASGTHRT 75 Query: 244 VLNNKFLIEL 253 + +F +L Sbjct: 76 MKIEEFEKKL 85 >5OLJ-A nrPDB Length = 723 Score = 29.2 bits (64), Expect = 1.7, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 64/151 (42%), Gaps = 20/151 (13%) Query: 60 DRMKKMLEDRQFPEEYTKNLFNVPETSSNL--------DINSEYTAFPVENRDLFQAGLT 111 + M ED+ +PE+YT E +S + D N++ + P++ G Sbjct: 224 EYRMPMYEDKLYPEDYTYKYPKAGEKNSTVSLHLYNVADRNTKSVSLPID-----ADGYI 278 Query: 112 TIVPIIGGGERLGTLILSRLQDQFNDDDLILAEYGATVVGMEILREKAEEIEEEARSKAV 171 + + L + L+RLQ+ F + + ++V IL++ + + +A+ Sbjct: 279 PRIAFTDNADELAVMTLNRLQNDFK----MYYVHPKSLVPKLILQDMNKRYVDSDWIQAL 334 Query: 172 VQMAISSLSY-SELEAIEHIFEELDGNEGLL 201 A +Y SE + HI+ L N+G++ Sbjct: 335 KFTAGGGFAYVSEKDGFAHIY--LYDNKGVM 363 >2W25-A nrPDB Length = 150 Score = 29.2 bits (64), Expect = 2.1, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 29/51 (56%) Query: 184 LEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRS 234 L+ I+ I +G S++A R G++ S + + +R+LES GV++ S Sbjct: 5 LDDIDRILVRELAADGRATLSELATRAGLSVSAVQSRVRRLESRGVVQGYS 55 >1DL3-A nrPDB Length = 203 Score = 27.3 bits (59), Expect = 6.9, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 10/102 (9%) Query: 136 NDDDLILAEYGATVVGMEILREKAEEIEEEARSKAVVQMAISSLSYSELEAIEHIFE--- 192 +D L E GA VG + I E + V++ + + E E I + Sbjct: 12 LEDALFSVESGADYVGFVFYPKSKRYISPEDARRISVELPVERVGVFVNEEPEKILDVAS 71 Query: 193 -------ELDGNEGLLVASKIADRVGITRSVIVNALRKLESA 227 +L G E + + KIA+R+ + ++V V+ R +E A Sbjct: 72 YVQLNAVQLHGEEPIELCRKIAERILVWKAVGVSNERDMERA 113 >6BZS-A nrPDB Length = 238 Score = 26.9 bits (58), Expect = 8.6, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 11/83 (13%) Query: 169 KAVVQMAISSLSYSELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAG 228 KA V + L+ + +H+F ++ G GLL G TR ++ +AL L A Sbjct: 149 KAAVYLLDDPLAALDAHVGQHVFNQVIGPGGLL--------QGTTRILVTHALHILPQAD 200 Query: 229 ---VIESRSLGMKGTYIKVLNNK 248 V+ + ++ G+Y ++L K Sbjct: 201 WIIVLANGAIAEMGSYQELLQRK 223 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.317 0.140 0.356 Lambda K H 0.267 0.0421 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,931,604 Number of Sequences: 36641 Number of extensions: 352260 Number of successful extensions: 1390 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 29 Number of HSP's successfully gapped in prelim test: 28 Number of HSP's that attempted gapping in prelim test: 1352 Number of HSP's gapped (non-prelim): 61 length of query: 259 length of database: 10,336,785 effective HSP length: 95 effective length of query: 164 effective length of database: 6,855,890 effective search space: 1124365960 effective search space used: 1124365960 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 58 (26.9 bits)