BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P38863 (823 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5FLZ-A nrPDB 1701 0.0 3MPX-A nrPDB 34 0.34 5LNK-Z nrPDB 31 2.6 3RIP-A nrPDB 30 3.8 3JRW-A nrPDB 30 4.1 3NCG-A nrPDB 30 4.7 5FM1-B nrPDB 29 8.4 >5FLZ-A nrPDB Length = 823 Score = 1701 bits (4406), Expect = 0.0, Method: Compositional matrix adjust. Identities = 823/823 (100%), Positives = 823/823 (100%) Query: 1 MEIKEVDDRAELLRYTNNIPLLGKLVNHQPLWSTNPKLKSFSLEKISAPDQRRVQEALVV 60 MEIKEVDDRAELLRYTNNIPLLGKLVNHQPLWSTNPKLKSFSLEKISAPDQRRVQEALVV Sbjct: 1 MEIKEVDDRAELLRYTNNIPLLGKLVNHQPLWSTNPKLKSFSLEKISAPDQRRVQEALVV 60 Query: 61 KDLLNVLIGLEGTYIRYFNDYEPSDPETPIEFKIAKKMDPSFKTFSRRIVRYGKQYMILT 120 KDLLNVLIGLEGTYIRYFNDYEPSDPETPIEFKIAKKMDPSFKTFSRRIVRYGKQYMILT Sbjct: 61 KDLLNVLIGLEGTYIRYFNDYEPSDPETPIEFKIAKKMDPSFKTFSRRIVRYGKQYMILT 120 Query: 121 RAYEKWSDTSFGMVLQRFAYEIRRFLEDVYLKTLVERLERDFNKVPNFSIRELEQIINET 180 RAYEKWSDTSFGMVLQRFAYEIRRFLEDVYLKTLVERLERDFNKVPNFSIRELEQIINET Sbjct: 121 RAYEKWSDTSFGMVLQRFAYEIRRFLEDVYLKTLVERLERDFNKVPNFSIRELEQIINET 180 Query: 181 EVNKQMELLYNIYEEIFREIEERRTNQSSQEDFNNFMDSMKNESSLHLRLMVAFDTTVYP 240 EVNKQMELLYNIYEEIFREIEERRTNQSSQEDFNNFMDSMKNESSLHLRLMVAFDTTVYP Sbjct: 181 EVNKQMELLYNIYEEIFREIEERRTNQSSQEDFNNFMDSMKNESSLHLRLMVAFDTTVYP 240 Query: 241 VPKGGAILKIFQQKILENLGDRSSVMFLKKLLNNISQDYCTMLYEWLTQGILNDPYQEFM 300 VPKGGAILKIFQQKILENLGDRSSVMFLKKLLNNISQDYCTMLYEWLTQGILNDPYQEFM Sbjct: 241 VPKGGAILKIFQQKILENLGDRSSVMFLKKLLNNISQDYCTMLYEWLTQGILNDPYQEFM 300 Query: 301 TYDDLEGKTDNIFDTRDRAWDTQYFIRKDVLLRDCDSEEDKNLLFKMLRTGILLKVVRAS 360 TYDDLEGKTDNIFDTRDRAWDTQYFIRKDVLLRDCDSEEDKNLLFKMLRTGILLKVVRAS Sbjct: 301 TYDDLEGKTDNIFDTRDRAWDTQYFIRKDVLLRDCDSEEDKNLLFKMLRTGILLKVVRAS 360 Query: 361 LQIPTIPSNSSDITIQEINDFADLMEGSNLELYVDKCYSRANEIFLKLFFQGYDLINVLK 420 LQIPTIPSNSSDITIQEINDFADLMEGSNLELYVDKCYSRANEIFLKLFFQGYDLINVLK Sbjct: 361 LQIPTIPSNSSDITIQEINDFADLMEGSNLELYVDKCYSRANEIFLKLFFQGYDLINVLK 420 Query: 421 HLQQIFLGYQSGHNVLKFLTKNMGELTKHYRNDNNANYDKLLQNFELERQSENPNNLMRQ 480 HLQQIFLGYQSGHNVLKFLTKNMGELTKHYRNDNNANYDKLLQNFELERQSENPNNLMRQ Sbjct: 421 HLQQIFLGYQSGHNVLKFLTKNMGELTKHYRNDNNANYDKLLQNFELERQSENPNNLMRQ 480 Query: 481 LLMIQFDTETLPQVLSHYLQIYPEVPENNSANDDSDPLMHANNFKNMNAILFDELSKERT 540 LLMIQFDTETLPQVLSHYLQIYPEVPENNSANDDSDPLMHANNFKNMNAILFDELSKERT Sbjct: 481 LLMIQFDTETLPQVLSHYLQIYPEVPENNSANDDSDPLMHANNFKNMNAILFDELSKERT 540 Query: 541 GAYHGSNLELYTPKSAIYHLKFDINIPYPLNIIISRTCMIKYQIILRYQLVLQYHSRLLD 600 GAYHGSNLELYTPKSAIYHLKFDINIPYPLNIIISRTCMIKYQIILRYQLVLQYHSRLLD Sbjct: 541 GAYHGSNLELYTPKSAIYHLKFDINIPYPLNIIISRTCMIKYQIILRYQLVLQYHSRLLD 600 Query: 601 ETWMDLNKTPSWKYRGYSHTVKRRIVRATRVLHAKMNHFIKTIMEYFNQNVIDKEVYSLE 660 ETWMDLNKTPSWKYRGYSHTVKRRIVRATRVLHAKMNHFIKTIMEYFNQNVIDKEVYSLE Sbjct: 601 ETWMDLNKTPSWKYRGYSHTVKRRIVRATRVLHAKMNHFIKTIMEYFNQNVIDKEVYSLE 660 Query: 661 KCYRNPTLAVAIQNELEGGLTNIMTNRCLSDLIPLQLQIFDIVYKFCKFIKSMRAKLCQL 720 KCYRNPTLAVAIQNELEGGLTNIMTNRCLSDLIPLQLQIFDIVYKFCKFIKSMRAKLCQL Sbjct: 661 KCYRNPTLAVAIQNELEGGLTNIMTNRCLSDLIPLQLQIFDIVYKFCKFIKSMRAKLCQL 720 Query: 721 DPVLYEKHKSGMMKTLNEGYRTNNGGQEDVGYQEDAALELIQKLIEYISNASSIFRKCLI 780 DPVLYEKHKSGMMKTLNEGYRTNNGGQEDVGYQEDAALELIQKLIEYISNASSIFRKCLI Sbjct: 721 DPVLYEKHKSGMMKTLNEGYRTNNGGQEDVGYQEDAALELIQKLIEYISNASSIFRKCLI 780 Query: 781 NFTQELSTEKFDFYDSSSVDAAGIERVLYSIVPPRSASASSQR 823 NFTQELSTEKFDFYDSSSVDAAGIERVLYSIVPPRSASASSQR Sbjct: 781 NFTQELSTEKFDFYDSSSVDAAGIERVLYSIVPPRSASASSQR 823 >3MPX-A nrPDB Length = 434 Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust. Identities = 34/158 (21%), Positives = 69/158 (43%), Gaps = 21/158 (13%) Query: 172 ELEQIINETEVNKQMELLYNIYEEIFREIEERRTNQSSQEDFNNFMDSMKNESSLHLRLM 231 EL Q ++E + ++++++ I E+EER +N SQ+ + + + H + Sbjct: 71 ELRQGLSE------LPAIHDLHQGILEELEERLSNWESQQKVADVFLAREQGFDHHATHI 124 Query: 232 VAFD-------TTVYPVPKGGAILKIFQQKILENLGDRSSVMFLKKLLNNISQDYCTMLY 284 + FD P+ A ++ F+Q + G +++ L +++ + Q Y Sbjct: 125 LQFDRYLGLLSENCLHSPRLAAAVREFEQSV--QGGSQTAKHRLLRVVQRLFQ------Y 176 Query: 285 EWLTQGILNDPYQEFMTYDDLEGKTDNIFDTRDRAWDT 322 + L LN+ + YD+ +G I DRA D+ Sbjct: 177 QVLLTDYLNNLCPDSAEYDNTQGALSLISKVTDRANDS 214 >5LNK-Z nrPDB Length = 175 Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 36/74 (48%) Query: 130 SFGMVLQRFAYEIRRFLEDVYLKTLVERLERDFNKVPNFSIRELEQIINETEVNKQMELL 189 +F +++ R +R F+E + K R+F +VP+ + + ++ E Q + Sbjct: 35 AFDLLVDRPVTLVREFIERQHAKNKYYYYHREFRRVPDITECHEKDVLCMFEAEMQWKRD 94 Query: 190 YNIYEEIFREIEER 203 Y + +EI I+ER Sbjct: 95 YKVDQEIVNIIQER 108 >3RIP-A nrPDB Length = 677 Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust. Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 11/94 (11%) Query: 537 KERTGAYHGSNLELY---TPKSAIYHLKFDINIPYPLNIIISRTCMIKYQIILRYQLVLQ 593 K+ T A G + E P S L + +PL+I+ + + KY ++ +Y L ++ Sbjct: 426 KDATQAREGPSRETSPREAPASGWAALGLSYKVQWPLHILFTPAVLEKYNVVFKYLLSVR 485 Query: 594 YHSRLLDETW--------MDLNKTPSWKYRGYSH 619 L W + N+T + K+R +H Sbjct: 486 RVQAELQHCWALQMQRKHLKSNQTDAIKWRLRNH 519 >3JRW-A nrPDB Length = 587 Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust. Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 6/56 (10%) Query: 352 ILLKVVRASLQIPTIPSNSSDITIQEINDFADLMEGSNL----ELYVDKCYSRANE 403 I VV +LQ+PT+P + S +T++ D DL +G + ++Y C +E Sbjct: 182 IASTVVAQTLQVPTLPWSGSGLTVEWTED--DLQQGKRISVPEDVYDKGCVKDVDE 235 >3NCG-A nrPDB Length = 486 Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust. Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 12/72 (16%) Query: 156 ERLERDF-----NKVPNFSIRELEQIINETEVNKQMELLYNIYEEIFREIEERRTNQSSQ 210 ER+ER F + S +EL ++ ++ + + QME L +I IE+ N+ + Sbjct: 417 ERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESI-------IEQVDNNKDGE 469 Query: 211 EDFNNFMDSMKN 222 DFN F++ ++N Sbjct: 470 VDFNEFVEMLQN 481 >5FM1-B nrPDB Length = 846 Score = 28.9 bits (63), Expect = 8.4, Method: Compositional matrix adjust. Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%) Query: 255 ILENLGDRSSVMFLKKLLNNISQDYCTMLYEWLTQGILNDPYQEFMTYD--DLEGKTDN 311 I ++ GD + L N++ Y L WLT+G+L Y EF + D G D+ Sbjct: 318 IFKSHGDLTIRKIATNLFNSMISLYYEYLMNWLTKGLLRATYGEFFIAENTDTNGTDDD 376 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5FLZ-A nrPDB 1720 0.0 Sequences not found previously or not previously below threshold: 3MPX-A nrPDB 34 0.31 3NCG-A nrPDB 33 0.37 3RSJ-A nrPDB 33 0.52 6CGM-A nrPDB 33 0.64 5GPN-Aj nrPDB 33 0.64 5LNK-Z nrPDB 32 1.1 5MRF-DD nrPDB 31 1.9 5JMP-A nrPDB 31 2.4 3AUA-A nrPDB 31 2.4 5FM1-B nrPDB 30 3.7 3RIP-A nrPDB 30 4.5 2VIX-A nrPDB 30 5.6 6BWF-A nrPDB 30 6.5 4HTA-A nrPDB 29 7.6 3JRW-A nrPDB 29 9.3 CONVERGED! >5FLZ-A nrPDB Length = 823 Score = 1720 bits (4454), Expect = 0.0, Method: Composition-based stats. Identities = 823/823 (100%), Positives = 823/823 (100%) Query: 1 MEIKEVDDRAELLRYTNNIPLLGKLVNHQPLWSTNPKLKSFSLEKISAPDQRRVQEALVV 60 MEIKEVDDRAELLRYTNNIPLLGKLVNHQPLWSTNPKLKSFSLEKISAPDQRRVQEALVV Sbjct: 1 MEIKEVDDRAELLRYTNNIPLLGKLVNHQPLWSTNPKLKSFSLEKISAPDQRRVQEALVV 60 Query: 61 KDLLNVLIGLEGTYIRYFNDYEPSDPETPIEFKIAKKMDPSFKTFSRRIVRYGKQYMILT 120 KDLLNVLIGLEGTYIRYFNDYEPSDPETPIEFKIAKKMDPSFKTFSRRIVRYGKQYMILT Sbjct: 61 KDLLNVLIGLEGTYIRYFNDYEPSDPETPIEFKIAKKMDPSFKTFSRRIVRYGKQYMILT 120 Query: 121 RAYEKWSDTSFGMVLQRFAYEIRRFLEDVYLKTLVERLERDFNKVPNFSIRELEQIINET 180 RAYEKWSDTSFGMVLQRFAYEIRRFLEDVYLKTLVERLERDFNKVPNFSIRELEQIINET Sbjct: 121 RAYEKWSDTSFGMVLQRFAYEIRRFLEDVYLKTLVERLERDFNKVPNFSIRELEQIINET 180 Query: 181 EVNKQMELLYNIYEEIFREIEERRTNQSSQEDFNNFMDSMKNESSLHLRLMVAFDTTVYP 240 EVNKQMELLYNIYEEIFREIEERRTNQSSQEDFNNFMDSMKNESSLHLRLMVAFDTTVYP Sbjct: 181 EVNKQMELLYNIYEEIFREIEERRTNQSSQEDFNNFMDSMKNESSLHLRLMVAFDTTVYP 240 Query: 241 VPKGGAILKIFQQKILENLGDRSSVMFLKKLLNNISQDYCTMLYEWLTQGILNDPYQEFM 300 VPKGGAILKIFQQKILENLGDRSSVMFLKKLLNNISQDYCTMLYEWLTQGILNDPYQEFM Sbjct: 241 VPKGGAILKIFQQKILENLGDRSSVMFLKKLLNNISQDYCTMLYEWLTQGILNDPYQEFM 300 Query: 301 TYDDLEGKTDNIFDTRDRAWDTQYFIRKDVLLRDCDSEEDKNLLFKMLRTGILLKVVRAS 360 TYDDLEGKTDNIFDTRDRAWDTQYFIRKDVLLRDCDSEEDKNLLFKMLRTGILLKVVRAS Sbjct: 301 TYDDLEGKTDNIFDTRDRAWDTQYFIRKDVLLRDCDSEEDKNLLFKMLRTGILLKVVRAS 360 Query: 361 LQIPTIPSNSSDITIQEINDFADLMEGSNLELYVDKCYSRANEIFLKLFFQGYDLINVLK 420 LQIPTIPSNSSDITIQEINDFADLMEGSNLELYVDKCYSRANEIFLKLFFQGYDLINVLK Sbjct: 361 LQIPTIPSNSSDITIQEINDFADLMEGSNLELYVDKCYSRANEIFLKLFFQGYDLINVLK 420 Query: 421 HLQQIFLGYQSGHNVLKFLTKNMGELTKHYRNDNNANYDKLLQNFELERQSENPNNLMRQ 480 HLQQIFLGYQSGHNVLKFLTKNMGELTKHYRNDNNANYDKLLQNFELERQSENPNNLMRQ Sbjct: 421 HLQQIFLGYQSGHNVLKFLTKNMGELTKHYRNDNNANYDKLLQNFELERQSENPNNLMRQ 480 Query: 481 LLMIQFDTETLPQVLSHYLQIYPEVPENNSANDDSDPLMHANNFKNMNAILFDELSKERT 540 LLMIQFDTETLPQVLSHYLQIYPEVPENNSANDDSDPLMHANNFKNMNAILFDELSKERT Sbjct: 481 LLMIQFDTETLPQVLSHYLQIYPEVPENNSANDDSDPLMHANNFKNMNAILFDELSKERT 540 Query: 541 GAYHGSNLELYTPKSAIYHLKFDINIPYPLNIIISRTCMIKYQIILRYQLVLQYHSRLLD 600 GAYHGSNLELYTPKSAIYHLKFDINIPYPLNIIISRTCMIKYQIILRYQLVLQYHSRLLD Sbjct: 541 GAYHGSNLELYTPKSAIYHLKFDINIPYPLNIIISRTCMIKYQIILRYQLVLQYHSRLLD 600 Query: 601 ETWMDLNKTPSWKYRGYSHTVKRRIVRATRVLHAKMNHFIKTIMEYFNQNVIDKEVYSLE 660 ETWMDLNKTPSWKYRGYSHTVKRRIVRATRVLHAKMNHFIKTIMEYFNQNVIDKEVYSLE Sbjct: 601 ETWMDLNKTPSWKYRGYSHTVKRRIVRATRVLHAKMNHFIKTIMEYFNQNVIDKEVYSLE 660 Query: 661 KCYRNPTLAVAIQNELEGGLTNIMTNRCLSDLIPLQLQIFDIVYKFCKFIKSMRAKLCQL 720 KCYRNPTLAVAIQNELEGGLTNIMTNRCLSDLIPLQLQIFDIVYKFCKFIKSMRAKLCQL Sbjct: 661 KCYRNPTLAVAIQNELEGGLTNIMTNRCLSDLIPLQLQIFDIVYKFCKFIKSMRAKLCQL 720 Query: 721 DPVLYEKHKSGMMKTLNEGYRTNNGGQEDVGYQEDAALELIQKLIEYISNASSIFRKCLI 780 DPVLYEKHKSGMMKTLNEGYRTNNGGQEDVGYQEDAALELIQKLIEYISNASSIFRKCLI Sbjct: 721 DPVLYEKHKSGMMKTLNEGYRTNNGGQEDVGYQEDAALELIQKLIEYISNASSIFRKCLI 780 Query: 781 NFTQELSTEKFDFYDSSSVDAAGIERVLYSIVPPRSASASSQR 823 NFTQELSTEKFDFYDSSSVDAAGIERVLYSIVPPRSASASSQR Sbjct: 781 NFTQELSTEKFDFYDSSSVDAAGIERVLYSIVPPRSASASSQR 823 >3MPX-A nrPDB Length = 434 Score = 33.9 bits (76), Expect = 0.31, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 64/145 (44%), Gaps = 15/145 (10%) Query: 185 QMELLYNIYEEIFREIEERRTNQSSQEDFNNFMDSMKNESSLHLRLMVAFD-------TT 237 ++ ++++++ I E+EER +N SQ+ + + + H ++ FD Sbjct: 78 ELPAIHDLHQGILEELEERLSNWESQQKVADVFLAREQGFDHHATHILQFDRYLGLLSEN 137 Query: 238 VYPVPKGGAILKIFQQKILENLGDRSSVMFLKKLLNNISQDYCTMLYEWLTQGILNDPYQ 297 P+ A ++ F+Q + G +++ L +++ + Q Y+ L LN+ Sbjct: 138 CLHSPRLAAAVREFEQSV--QGGSQTAKHRLLRVVQRLFQ------YQVLLTDYLNNLCP 189 Query: 298 EFMTYDDLEGKTDNIFDTRDRAWDT 322 + YD+ +G I DRA D+ Sbjct: 190 DSAEYDNTQGALSLISKVTDRANDS 214 >3NCG-A nrPDB Length = 486 Score = 33.5 bits (75), Expect = 0.37, Method: Composition-based stats. Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 15/90 (16%) Query: 141 EIRRFLEDVYLKTLV---ERLERDFNKVPN-----FSIRELEQIINETEVNKQMELLYNI 192 E F+ +T++ ER+ER F S +EL ++ ++ + + QME L +I Sbjct: 399 EYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESI 458 Query: 193 YEEIFREIEERRTNQSSQEDFNNFMDSMKN 222 IE+ N+ + DFN F++ ++N Sbjct: 459 -------IEQVDNNKDGEVDFNEFVEMLQN 481 >3RSJ-A nrPDB Length = 413 Score = 33.1 bits (74), Expect = 0.52, Method: Composition-based stats. Identities = 43/169 (25%), Positives = 69/169 (40%), Gaps = 16/169 (9%) Query: 75 IRYFNDYEPSDPETPIEFKIAKKMDPS-FKTFSRRIVRYGKQYMILTRAYEKWSDTSFGM 133 IRYF ++ +T IE + + DPS K F + Y K+Y +L S T Sbjct: 197 IRYFKVFDTELGKTEIETLYSDEPDPSILKDFWGNYLLYNKRYYLLNLLRTDKSITQNSN 256 Query: 134 VL----QRFAYEIRRFLEDVYLKTLVERLER-----DFNKVPNFSIRELEQIINETEVNK 184 L QR Y+ + L T VE + R D + NF + IN + + Sbjct: 257 FLNINQQRGVYQKPNIFSNTRLYTGVEVIIRKNGSTDISNTDNFVRKNDLAYINVVDRDV 316 Query: 185 QMELLYNIY----EEIFREIEERRTNQSSQEDFNNFMDSMKNESSLHLR 229 + L +I E+I + I +N S + MDS+ N +++ + Sbjct: 317 EYRLYADISIAKPEKIIKLIRTSNSNNSLGQII--VMDSIGNNCTMNFQ 363 >6CGM-A nrPDB Length = 700 Score = 32.7 bits (73), Expect = 0.64, Method: Composition-based stats. Identities = 29/125 (23%), Positives = 54/125 (43%), Gaps = 25/125 (20%) Query: 433 HNVLKFLTKNMGELTKHYRNDNNANYDKLLQNFELERQSENPNNLMRQLLMIQFDTETLP 492 H + K ++M E+ D N YDK + N ++++ NP L+ +L M++ ++ Sbjct: 304 HTIYKEYGQHMDEM------DMNEMYDKFVDNPRVKKEKINPRKLLEKLAMLRSESG--- 354 Query: 493 QVLSHYLQIYPEVPENNSANDDSDPLMHANNFKNMNAILFDELSKERTGAYHGSNLELYT 552 YP + ++ N +HANN +++ + F L E A S+ Y Sbjct: 355 ---------YPYIMFQDNVNK-----VHANN--HISKVKFSNLCSEVLQASQVSSYTDYD 398 Query: 553 PKSAI 557 + I Sbjct: 399 EEDEI 403 >5GPN-Aj nrPDB Length = 176 Score = 32.7 bits (73), Expect = 0.64, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 34/73 (46%) Query: 131 FGMVLQRFAYEIRRFLEDVYLKTLVERLERDFNKVPNFSIRELEQIINETEVNKQMELLY 190 F +++ R R F+E + K R+F +VP+ + E + I+ E Q Y Sbjct: 37 FDLLVDRPVTLAREFIEQQHAKNRYYYYHREFRRVPDITECEEKDILCMFEAEMQWRRDY 96 Query: 191 NIYEEIFREIEER 203 + +EI I+ER Sbjct: 97 KVDQEIVNIIQER 109 >5LNK-Z nrPDB Length = 175 Score = 31.9 bits (71), Expect = 1.1, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 36/74 (48%) Query: 130 SFGMVLQRFAYEIRRFLEDVYLKTLVERLERDFNKVPNFSIRELEQIINETEVNKQMELL 189 +F +++ R +R F+E + K R+F +VP+ + + ++ E Q + Sbjct: 35 AFDLLVDRPVTLVREFIERQHAKNKYYYYHREFRRVPDITECHEKDVLCMFEAEMQWKRD 94 Query: 190 YNIYEEIFREIEER 203 Y + +EI I+ER Sbjct: 95 YKVDQEIVNIIQER 108 >5MRF-DD nrPDB Length = 486 Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 158 LERDFNKVPN--FSIRELEQIINETEVNKQMELLYNIYEEIFREIEERR 204 +E++ K N SI EL+Q + E + ++ +E L N Y+E F+ E RR Sbjct: 251 VEKEIGKSNNEPLSIDELKQGLPEIQDSQLLESLNNAYQEFFKSGEIRR 299 >5JMP-A nrPDB Length = 422 Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 9/76 (11%) Query: 419 LKHLQQIFLGYQSG--HNVLKFLTKNMGELTKHYRNDNNANY-------DKLLQNFELER 469 L+H I L YQ+G N + E+ + +N Y ++L++F ++ Sbjct: 330 LEHFPCIKLAYQAGIKGNFYPTVLNASNEIANNLFLNNKIKYFDISSIISQVLESFNSQK 389 Query: 470 QSENPNNLMRQLLMIQ 485 SEN +LM+Q+L I Sbjct: 390 VSENSEDLMKQILQIH 405 >3AUA-A nrPDB Length = 488 Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 9/76 (11%) Query: 419 LKHLQQIFLGYQSG--HNVLKFLTKNMGELTKHYRNDNNANY-------DKLLQNFELER 469 L+H I L YQ+G N + E+ + +N Y ++L++F ++ Sbjct: 396 LEHFPCIKLAYQAGIKGNFYPTVLNASNEIANNLFLNNKIKYFDISSIISQVLESFNSQK 455 Query: 470 QSENPNNLMRQLLMIQ 485 SEN +LM+Q+L I Sbjct: 456 VSENSEDLMKQILQIH 471 >5FM1-B nrPDB Length = 846 Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 250 IFQQKILENLGDRSSVMFLKKLLNNISQDYCTMLYEWLTQGILNDPYQEFMTYDDLEGK- 308 + + I ++ GD + L N++ Y L WLT+G+L Y EF ++ + Sbjct: 313 LIELNIFKSHGDLTIRKIATNLFNSMISLYYEYLMNWLTKGLLRATYGEFFIAENTDTNG 372 Query: 309 TDNIF 313 TD+ F Sbjct: 373 TDDDF 377 >3RIP-A nrPDB Length = 677 Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 11/94 (11%) Query: 537 KERTGAYHGSNLELY---TPKSAIYHLKFDINIPYPLNIIISRTCMIKYQIILRYQLVLQ 593 K+ T A G + E P S L + +PL+I+ + + KY ++ +Y L ++ Sbjct: 426 KDATQAREGPSRETSPREAPASGWAALGLSYKVQWPLHILFTPAVLEKYNVVFKYLLSVR 485 Query: 594 YHSRLLDETW--------MDLNKTPSWKYRGYSH 619 L W + N+T + K+R +H Sbjct: 486 RVQAELQHCWALQMQRKHLKSNQTDAIKWRLRNH 519 >2VIX-A nrPDB Length = 294 Score = 29.6 bits (65), Expect = 5.6, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 39/66 (59%), Gaps = 4/66 (6%) Query: 140 YEIRRFLEDVYL--KTLVERLERDFNKVPNFSIRELEQIINETEVN-KQMELLYNIYEEI 196 ++++R L+D + ++RL+R F K P+ + L +++NE ++ +Q+ELL I EI Sbjct: 30 FDLKRTLKDNLPLDRDFIDRLKRYF-KDPSDQVLALRELLNEKDLTAEQVELLTKIINEI 88 Query: 197 FREIEE 202 E+ Sbjct: 89 ISGSEK 94 >6BWF-A nrPDB Length = 954 Score = 29.6 bits (65), Expect = 6.5, Method: Composition-based stats. Identities = 32/135 (23%), Positives = 57/135 (42%), Gaps = 16/135 (11%) Query: 567 PYPLNIIISRTCMIKYQIILRYQLVLQYHSRLLDETWMDLNKTPSWKYRGYSHTVKRR-- 624 PYPLN ++ C++K Q++ R+ L H E M YR ++ K+ Sbjct: 273 PYPLNELLIWACLMKRQVMARF---LWQHG----EESMAKALVACKIYRSMAYEAKQSDL 325 Query: 625 IVRATRVLHAKMNHFIKTIMEYFNQNVIDKEVYSLE------KCYRNPT-LAVAIQNELE 677 + + L N F + +E Q+ E +++ K + N T L +A+ + L Sbjct: 326 VDDTSEELKQYSNDFGQLAVELLEQSFRQDETMAMKLLTYELKNWSNSTCLKLAVSSRLR 385 Query: 678 GGLTNIMTNRCLSDL 692 + + T LSD+ Sbjct: 386 PFVAHTCTQMLLSDM 400 >4HTA-A nrPDB Length = 288 Score = 29.2 bits (64), Expect = 7.6, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 22/39 (56%) Query: 269 KKLLNNISQDYCTMLYEWLTQGILNDPYQEFMTYDDLEG 307 K L+ ++ DY +LY+ + G N Y +F Y +LEG Sbjct: 52 KHLVPHLVDDYRVVLYDNMGAGTTNPDYFDFDRYSNLEG 90 >3JRW-A nrPDB Length = 587 Score = 28.8 bits (63), Expect = 9.3, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 6/52 (11%) Query: 356 VVRASLQIPTIPSNSSDITIQEINDFADLMEGSNL----ELYVDKCYSRANE 403 VV +LQ+PT+P + S +T++ D DL +G + ++Y C +E Sbjct: 186 VVAQTLQVPTLPWSGSGLTVEWTED--DLQQGKRISVPEDVYDKGCVKDVDE 235 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.320 0.137 0.394 Lambda K H 0.267 0.0433 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,775,914 Number of Sequences: 36641 Number of extensions: 1621214 Number of successful extensions: 3959 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 22 Number of HSP's that attempted gapping in prelim test: 3921 Number of HSP's gapped (non-prelim): 48 length of query: 823 length of database: 10,336,785 effective HSP length: 105 effective length of query: 718 effective length of database: 6,489,480 effective search space: 4659446640 effective search space used: 4659446640 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 63 (28.8 bits)