BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P38862 (630 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3VH2-A nrPDB 1263 0.0 3T7E-A nrPDB 707 0.0 3T7H-A nrPDB 593 e-170 3VX6-A nrPDB 172 3e-43 3VX8-D nrPDB 84 2e-16 1JWB-B nrPDB 64 2e-10 1YOV-B nrPDB 57 3e-08 2NVU-B nrPDB 56 5e-08 3H5A-A nrPDB 54 3e-07 3KYC-B nrPDB 51 2e-06 3KYD-B nrPDB 51 2e-06 6CWZ-C nrPDB 43 5e-04 5FF5-A nrPDB 42 7e-04 4P22-A nrPDB 41 0.001 5A9Q-5 nrPDB 34 0.24 1W7P-D nrPDB 32 0.77 4I6J-A nrPDB 31 2.0 4UEJ-A nrPDB 31 2.0 6ETB-A nrPDB 30 3.3 4D02-A nrPDB 30 3.6 3KBO-A nrPDB 29 5.0 2A9F-A nrPDB 29 5.7 5V8F-8 nrPDB 28 9.2 >3VH2-A nrPDB Length = 616 Score = 1263 bits (3267), Expect = 0.0, Method: Compositional matrix adjust. Identities = 613/613 (100%), Positives = 613/613 (100%) Query: 1 MSSERVLSYAPAFKSFLDTSFFQELSRLKLDVLKLDSTCQPLTVNLDLHNIPKSADQVPL 60 MSSERVLSYAPAFKSFLDTSFFQELSRLKLDVLKLDSTCQPLTVNLDLHNIPKSADQVPL Sbjct: 4 MSSERVLSYAPAFKSFLDTSFFQELSRLKLDVLKLDSTCQPLTVNLDLHNIPKSADQVPL 63 Query: 61 FLTNRSFEKHNNKRTNEVPLQGSIFNFNVLDEFKNLDKQLFLHQRALECWEDGIKDINKC 120 FLTNRSFEKHNNKRTNEVPLQGSIFNFNVLDEFKNLDKQLFLHQRALECWEDGIKDINKC Sbjct: 64 FLTNRSFEKHNNKRTNEVPLQGSIFNFNVLDEFKNLDKQLFLHQRALECWEDGIKDINKC 123 Query: 121 VSFVIISFADLKKYRFYYWLGVPCFQRPSSTVLHVRPEPSLKGLFSKCQKWFDVNYSKWV 180 VSFVIISFADLKKYRFYYWLGVPCFQRPSSTVLHVRPEPSLKGLFSKCQKWFDVNYSKWV Sbjct: 124 VSFVIISFADLKKYRFYYWLGVPCFQRPSSTVLHVRPEPSLKGLFSKCQKWFDVNYSKWV 183 Query: 181 CILDADDEIVNYDKCIIRKTKVLAIRDTSTMENVPSALTKNFLSVLQYDVPDLIDFKLLI 240 CILDADDEIVNYDKCIIRKTKVLAIRDTSTMENVPSALTKNFLSVLQYDVPDLIDFKLLI Sbjct: 184 CILDADDEIVNYDKCIIRKTKVLAIRDTSTMENVPSALTKNFLSVLQYDVPDLIDFKLLI 243 Query: 241 IRQNEGSFALNATFASIDPQSSSSNPDMKVSGWERNVQGKLAPRVVDLSSLLDPLKIADQ 300 IRQNEGSFALNATFASIDPQSSSSNPDMKVSGWERNVQGKLAPRVVDLSSLLDPLKIADQ Sbjct: 244 IRQNEGSFALNATFASIDPQSSSSNPDMKVSGWERNVQGKLAPRVVDLSSLLDPLKIADQ 303 Query: 301 SVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVS 360 SVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVS Sbjct: 304 SVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVS 363 Query: 361 YSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDF 420 YSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDF Sbjct: 364 YSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDF 423 Query: 421 DRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINAALGFDSYLVMRHGNRDEQSS 480 DRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINAALGFDSYLVMRHGNRDEQSS Sbjct: 424 DRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINAALGFDSYLVMRHGNRDEQSS 483 Query: 481 KQLGCYFCHDVVAPTDSLTDRTLDQMCTVTRPGVAMMASSLAVELMTSLLQTKYSGSETT 540 KQLGCYFCHDVVAPTDSLTDRTLDQMCTVTRPGVAMMASSLAVELMTSLLQTKYSGSETT Sbjct: 484 KQLGCYFCHDVVAPTDSLTDRTLDQMCTVTRPGVAMMASSLAVELMTSLLQTKYSGSETT 543 Query: 541 VLGDIPHQIRGFLHNFSILKLETPAYEHCPACSPKVIEAFTDLGWEFVKKALEHPLYLEE 600 VLGDIPHQIRGFLHNFSILKLETPAYEHCPACSPKVIEAFTDLGWEFVKKALEHPLYLEE Sbjct: 544 VLGDIPHQIRGFLHNFSILKLETPAYEHCPACSPKVIEAFTDLGWEFVKKALEHPLYLEE 603 Query: 601 ISGLSVIKQEVER 613 ISGLSVIKQEVER Sbjct: 604 ISGLSVIKQEVER 616 >3T7E-A nrPDB Length = 344 Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust. Identities = 342/342 (100%), Positives = 342/342 (100%) Query: 289 SSLLDPLKIADQSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGV 348 SSLLDPLKIADQSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGV Sbjct: 3 SSLLDPLKIADQSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGV 62 Query: 349 RKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSIPMIGH 408 RKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSIPMIGH Sbjct: 63 RKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSIPMIGH 122 Query: 409 KLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINAALGFDSYL 468 KLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINAALGFDSYL Sbjct: 123 KLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINAALGFDSYL 182 Query: 469 VMRHGNRDEQSSKQLGCYFCHDVVAPTDSLTDRTLDQMCTVTRPGVAMMASSLAVELMTS 528 VMRHGNRDEQSSKQLGCYFCHDVVAPTDSLTDRTLDQMCTVTRPGVAMMASSLAVELMTS Sbjct: 183 VMRHGNRDEQSSKQLGCYFCHDVVAPTDSLTDRTLDQMCTVTRPGVAMMASSLAVELMTS 242 Query: 529 LLQTKYSGSETTVLGDIPHQIRGFLHNFSILKLETPAYEHCPACSPKVIEAFTDLGWEFV 588 LLQTKYSGSETTVLGDIPHQIRGFLHNFSILKLETPAYEHCPACSPKVIEAFTDLGWEFV Sbjct: 243 LLQTKYSGSETTVLGDIPHQIRGFLHNFSILKLETPAYEHCPACSPKVIEAFTDLGWEFV 302 Query: 589 KKALEHPLYLEEISGLSVIKQEVERLGNDVFEWEDDESDEIA 630 KKALEHPLYLEEISGLSVIKQEVERLGNDVFEWEDDESDEIA Sbjct: 303 KKALEHPLYLEEISGLSVIKQEVERLGNDVFEWEDDESDEIA 344 >3T7H-A nrPDB Length = 291 Score = 593 bits (1529), Expect = e-170, Method: Compositional matrix adjust. Identities = 288/289 (99%), Positives = 288/289 (99%) Query: 1 MSSERVLSYAPAFKSFLDTSFFQELSRLKLDVLKLDSTCQPLTVNLDLHNIPKSADQVPL 60 MSSERVLSYAPAFKSFLDTSFFQELSRLKLDVLKLDSTCQPLTVNLDLHNIPKSADQVPL Sbjct: 3 MSSERVLSYAPAFKSFLDTSFFQELSRLKLDVLKLDSTCQPLTVNLDLHNIPKSADQVPL 62 Query: 61 FLTNRSFEKHNNKRTNEVPLQGSIFNFNVLDEFKNLDKQLFLHQRALECWEDGIKDINKC 120 FLTNRSFEKHNNKRTNEVPLQGSIFNFNVLDEFKNLDKQLFLHQRALECWEDGIKDINKC Sbjct: 63 FLTNRSFEKHNNKRTNEVPLQGSIFNFNVLDEFKNLDKQLFLHQRALECWEDGIKDINKC 122 Query: 121 VSFVIISFADLKKYRFYYWLGVPCFQRPSSTVLHVRPEPSLKGLFSKCQKWFDVNYSKWV 180 VSFVIISFADLKKYRFYYWLGVPCFQRPSSTVLHVRPEPSLKGLFSKCQKWFDVNYSKWV Sbjct: 123 VSFVIISFADLKKYRFYYWLGVPCFQRPSSTVLHVRPEPSLKGLFSKCQKWFDVNYSKWV 182 Query: 181 CILDADDEIVNYDKCIIRKTKVLAIRDTSTMENVPSALTKNFLSVLQYDVPDLIDFKLLI 240 CILDADDEIVNYDKCIIRKTKVLAIRDTSTMENVPSALTKNFLSVLQYDVPDLIDFKLLI Sbjct: 183 CILDADDEIVNYDKCIIRKTKVLAIRDTSTMENVPSALTKNFLSVLQYDVPDLIDFKLLI 242 Query: 241 IRQNEGSFALNATFASIDPQSSSSNPDMKVSGWERNVQGKLAPRVVDLS 289 IRQNEGSFALNATFASIDPQSSSSNPDMKVSGWERNVQGKLA RVVDLS Sbjct: 243 IRQNEGSFALNATFASIDPQSSSSNPDMKVSGWERNVQGKLADRVVDLS 291 >3VX6-A nrPDB Length = 283 Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 108/293 (36%), Positives = 174/293 (59%), Gaps = 23/293 (7%) Query: 7 LSYAPAFKSFLDTSFFQELSRLKLDVLKLDSTCQPLTVNLDLHNIPKSADQVPLFLTNRS 66 L +AP+F+SF+D+SFF ELSRLKLD+ KLDS + L LDL+ +++ + + L + S Sbjct: 9 LKFAPSFQSFVDSSFFHELSRLKLDIFKLDSDEKALYTQLDLNQF--TSNVLAISLRDDS 66 Query: 67 FEKHNNKRTNEVPLQGSIFNFNVLDEFKNLDKQLFLHQRALECWEDGIK-DINKCVSFVI 125 F+K +N N + L+G + NFN ++ FKN +K F+ ++ E + G++ D+N+ +SF + Sbjct: 67 FQKPDNDEHN-IILKGYLLNFNTIELFKNCNKIQFIKEKGQELLQRGLENDLNEIISFYM 125 Query: 126 ISFADLKKYRFYYWLGVPCFQRPSSTVLHVRPEPSLKGLFSKCQKWFDVNYSKW----VC 181 ISFADLKKY+FYYW+ +P FQ +T + S K + S V++ K C Sbjct: 126 ISFADLKKYKFYYWICMPSFQSDGATYQII----SSKVIASDSD--ISVSFIKQNVIIAC 179 Query: 182 ILDADDEIVNYDKCIIRKTKVLAIRDTSTMENVPSALTKNFLSVLQYDVPDLIDFKLLII 241 ++ + D ++ + + +D S ++++PSA+TKN L+V P + + + Sbjct: 180 VISGVIQKATPDN--LKVCEKVVFKDFSHLKDIPSAVTKNILTVWSKLSPRET-YTICFL 236 Query: 242 RQNEGSFALNATFASIDPQSSSSNPDMKVSGWERNVQGKLAPRVVDLSSLLDP 294 R +E SF ++ +NP +KVSGWE+N GKLAP+ +DLSSL+DP Sbjct: 237 RSDESSFEAEIII------NNGNNPSLKVSGWEKNGLGKLAPKSIDLSSLMDP 283 >3VX8-D nrPDB Length = 323 Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 81/319 (25%), Positives = 145/319 (45%), Gaps = 39/319 (12%) Query: 6 VLSYAPAFKSFLDTSFFQELSRLKLDVLKLDSTCQPLTVNLDLHNIPKSADQVPLFLTNR 65 +L +AP S +D F+ S LKLD L +D + +T P+ ++ + L + Sbjct: 8 ILQFAP-LNSSVDEGFWHSFSSLKLDKLGIDDSPISITGFYGPCGHPQVSNHLTLLSESL 66 Query: 66 SFEK--------HNNKRTNEVPLQGSIFNFNVLDEFKNLDKQLFLHQRALECWED----- 112 ++ H N+ N+ P+ G ++N N ++ F LDKQ L A + WED Sbjct: 67 PLDEQSLIASTSHGNR--NKCPVPGILYNTNTVESFNKLDKQSLLKAEANKIWEDIQSGK 124 Query: 113 GIKDINKCVSFVIISFADLKKYRFYYWLGVPCFQ-RPSSTVLHVRPEPSL------KGLF 165 ++D + F++ISFADLKK+ F YW P F P +++ ++P + + Sbjct: 125 ALEDPSVLPRFLVISFADLKKWSFRYWFAFPAFVLDPPVSLIELKPASEYFSSEEAESVS 184 Query: 166 SKCQKWFDVNYSK----WVCILDADDE-----IVNYDKCIIRKTKVL-AIRDTSTMENVP 215 + C W D + + ++ + +D + + + + C K+L D + + P Sbjct: 185 AACNDWRDSDLTTDVPFFLVSVSSDSKASIRHLKDLEACQGDHQKLLFGFYDPCHLPSNP 244 Query: 216 SALTKNFLSVLQYDVPDLIDFKLLIIRQNEGSFALNATF---ASIDPQSSSSNPDMKVS- 271 +N+L++++ +L R++ G LN + ASI S S + S Sbjct: 245 GWPLRNYLALIRSRW-NLETVWFFCYRESRGFADLNLSLVGQASITLSSGESAETVPNSV 303 Query: 272 GWERNVQGKLAPRVVDLSS 290 GWE N +GK PR + L++ Sbjct: 304 GWELN-KGKRVPRSISLAN 321 >1JWB-B nrPDB Length = 249 Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 43/124 (34%), Positives = 63/124 (50%), Gaps = 15/124 (12%) Query: 320 DIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPK 379 + +K+++VL++G G LGC S+ L + GV +T +D TVS SN RQ L++ G+PK Sbjct: 27 EALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPK 86 Query: 380 AELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDS 439 E A +L RI P + T V + D L ALI EHD++ D+ Sbjct: 87 VESARDALTRINPHIAITPVNALL---------------DDAELAALIAEHDLVLDCTDN 131 Query: 440 RESR 443 R Sbjct: 132 VAVR 135 >1YOV-B nrPDB Length = 444 Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 30/72 (41%), Positives = 43/72 (59%) Query: 321 IIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKA 380 ++ KVL++GAG LGC + + L G R+I +D T+ SN RQ L+ +D G+PKA Sbjct: 47 LLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKA 106 Query: 381 ELAAASLKRIFP 392 E+AA L P Sbjct: 107 EVAAEFLNDRVP 118 >2NVU-B nrPDB Length = 805 Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 30/72 (41%), Positives = 43/72 (59%) Query: 321 IIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKA 380 ++ KVL++GAG LGC + + L G R+I +D T+ SN RQ L+ +D G+PKA Sbjct: 408 LLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKA 467 Query: 381 ELAAASLKRIFP 392 E+AA L P Sbjct: 468 EVAAEFLNDRVP 479 >3H5A-A nrPDB Length = 358 Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 49/89 (55%) Query: 315 PDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFED 374 P L D +KN KV++LG G +G +VS L G+ +I +DN + +N RQ L++ +D Sbjct: 106 PVLVQDKLKNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDD 165 Query: 375 CGKPKAELAAASLKRIFPLMDATGVKLSI 403 GK K E+ L + + + + L+I Sbjct: 166 VGKNKTEVIKRELLKRNSEISVSEIALNI 194 >3KYC-B nrPDB Length = 660 Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 45/81 (55%) Query: 312 RILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYN 371 R LP + + +VL++GAG +GC + + L+ G I +D T+ SN RQ L+ Sbjct: 25 RGLPRELAEAVAGGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQ 84 Query: 372 FEDCGKPKAELAAASLKRIFP 392 + G+ KA++A S+ + +P Sbjct: 85 KKHVGRSKAQVAKESVLQFYP 105 >3KYD-B nrPDB Length = 551 Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 45/81 (55%) Query: 312 RILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYN 371 R LP + + +VL++GAG +GC + + L+ G I +D T+ SN RQ L+ Sbjct: 7 RGLPRELAEAVAGGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQ 66 Query: 372 FEDCGKPKAELAAASLKRIFP 392 + G+ KA++A S+ + +P Sbjct: 67 KKHVGRSKAQVAKESVLQFYP 87 >6CWZ-C nrPDB Length = 346 Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 21/74 (28%), Positives = 42/74 (56%) Query: 322 IKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAE 381 ++ ++VLL+G LG +++ LI GV+ +T +D+ V+ +P Q L G+ +AE Sbjct: 34 LRASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAE 93 Query: 382 LAAASLKRIFPLMD 395 + + + P++D Sbjct: 94 ASLERAQNLNPMVD 107 >5FF5-A nrPDB Length = 381 Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 21/66 (31%), Positives = 33/66 (50%) Query: 322 IKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAE 381 +K +KV + G G G + + L G+ + +D V SN RQ LY +D GK K + Sbjct: 130 LKQSKVAIFGMGGWGTWCALQLAMSGIGTLRLIDGDDVELSNINRQVLYRTDDVGKNKVD 189 Query: 382 LAAASL 387 A ++ Sbjct: 190 AAKDTI 195 >4P22-A nrPDB Length = 446 Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 3/104 (2%) Query: 298 ADQSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 357 ++ +D L + +L + ++ + VL+ G LG +++ +I GV+ +T D G Sbjct: 53 SEADIDEGLYSRQLYVLGHEAMKRLQTSSVLVSGLRGLGVEIAKNIILGGVKAVTLHDQG 112 Query: 358 TVSYSNPVRQALYNFEDCGKPKAELAA---ASLKRIFPLMDATG 398 T +++ Q ED GK +AE++ A L P+ TG Sbjct: 113 TAQWADLSSQFYLREEDIGKNRAEVSQPRLAELNSYVPVTAYTG 156 >5A9Q-5 nrPDB Length = 937 Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust. Identities = 21/76 (27%), Positives = 31/76 (40%) Query: 284 RVVDLSSLLDPLKIADQSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRAL 343 R DL+ LL+P I +D L W +L LN + +L A G S L Sbjct: 622 RHYDLNQLLEPRSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGL 681 Query: 344 IAWGVRKITFVDNGTV 359 W + + +DN + Sbjct: 682 WEWAIFVLLHIDNSGI 697 >1W7P-D nrPDB Length = 566 Score = 32.0 bits (71), Expect = 0.77, Method: Compositional matrix adjust. Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 5/52 (9%) Query: 89 VLDEFKNLDKQLFLHQRALECWE---DGIKDINKCVSFVIISFADLKKYRFY 137 +LD K L+K+LFL + A E +E KD+N +++II+ DL Y Y Sbjct: 395 ILDREKFLNKELFLDEIAREIYEFTLSEFKDLNSDTNYMIITLVDL--YAMY 444 >4I6J-A nrPDB Length = 544 Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 8/74 (10%) Query: 284 RVVDLSSLLDPLKIADQSVDLNLKLMKWRIL----PDLNLDIIKNTKVLLLGAGTLGCYV 339 R V +LDP A SV +N +WR L DL+ + K L + G Sbjct: 47 RCVRCVYILDPWFAASSSVGIN----RWRFLLQSLEDLDTSLRKLNSRLFVVRGQPADVF 102 Query: 340 SRALIAWGVRKITF 353 R WGV ++TF Sbjct: 103 PRLFKEWGVTRLTF 116 >4UEJ-A nrPDB Length = 346 Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust. Identities = 11/33 (33%), Positives = 21/33 (63%) Query: 323 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVD 355 +N V+++GAGT+G + +A G + +T +D Sbjct: 160 ENKNVIIIGAGTIGLLAIQCAVALGAKSVTAID 192 >6ETB-A nrPDB Length = 412 Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust. Identities = 23/108 (21%), Positives = 44/108 (40%), Gaps = 15/108 (13%) Query: 315 PDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPV------RQA 368 P+ N +++K L +G G +V ++ W +T++ V +SN + Sbjct: 117 PEWNFNVVKTGDTLDIGNGKQLIFVETPMLHWPDSMMTYLTGDAVLFSNDAFGQHYCDEH 176 Query: 369 LYN--------FEDCGKPKAELAAASLKRIFP-LMDATGVKLSIPMIG 407 L+N FE C + A + + + P + + G L + MI Sbjct: 177 LFNDEVDQTELFEQCQRYYANILTPFSRLVTPKITEILGFNLPVDMIA 224 >4D02-A nrPDB Length = 479 Score = 29.6 bits (65), Expect = 3.6, Method: Compositional matrix adjust. Identities = 23/108 (21%), Positives = 44/108 (40%), Gaps = 15/108 (13%) Query: 315 PDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPV------RQA 368 P+ N +++K L +G G +V ++ W +T++ V +SN + Sbjct: 117 PEWNFNVVKTGDTLDIGNGKQLIFVETPMLHWPDSMMTYLTGDAVLFSNDAFGQHYCDEH 176 Query: 369 LYN--------FEDCGKPKAELAAASLKRIFP-LMDATGVKLSIPMIG 407 L+N FE C + A + + + P + + G L + MI Sbjct: 177 LFNDEVDQTELFEQCQRYYANILTPFSRLVTPKITEILGFNLPVDMIA 224 >3KBO-A nrPDB Length = 315 Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust. Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 3/37 (8%) Query: 311 WRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWG 347 W+ LP+ + V ++GAG LG V+ +L AWG Sbjct: 129 WKPLPEYTRE---EFSVGIMGAGVLGAKVAESLQAWG 162 >2A9F-A nrPDB Length = 398 Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust. Identities = 11/29 (37%), Positives = 19/29 (65%) Query: 327 VLLLGAGTLGCYVSRALIAWGVRKITFVD 355 +++ G G+ G ++R L+A G K+T VD Sbjct: 191 IVVNGGGSAGLSITRKLLAAGATKVTVVD 219 >5V8F-8 nrPDB Length = 604 Score = 28.5 bits (62), Expect = 9.2, Method: Compositional matrix adjust. Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 3/66 (4%) Query: 401 LSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINA 460 L +P+I V++E Q +RA++ +HD FLL + L +LL+ + K + + Sbjct: 13 LRVPVIDLNRVSDEEQL--LPVVRAILLQHDT-FLLKNYANKAVLDALLAGLTTKDLPDT 69 Query: 461 ALGFDS 466 + GFD+ Sbjct: 70 SQGFDA 75 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3VH2-A nrPDB 1066 0.0 3T7E-A nrPDB 634 0.0 3T7H-A nrPDB 469 e-132 3VX8-D nrPDB 357 1e-98 3VX6-A nrPDB 352 3e-97 1JWB-B nrPDB 148 6e-36 4P22-A nrPDB 131 7e-31 3KYD-B nrPDB 115 4e-26 3KYC-B nrPDB 115 4e-26 3H5A-A nrPDB 114 9e-26 6CWZ-C nrPDB 109 3e-24 2NVU-B nrPDB 109 4e-24 1YOV-B nrPDB 109 4e-24 5FF5-A nrPDB 104 1e-22 Sequences not found previously or not previously below threshold: 1ZFN-A nrPDB 99 7e-21 4RDI-A nrPDB 74 2e-13 1TT5-A nrPDB 73 3e-13 5IAA-A nrPDB 51 2e-06 4K28-A nrPDB 36 0.045 5ILO-A nrPDB 35 0.078 3VQI-A nrPDB 32 1.1 1PJ5-A nrPDB 31 1.4 2GF2-A nrPDB 31 1.6 2Q1T-A nrPDB 30 4.0 1W7P-D nrPDB 30 4.4 3FDG-A nrPDB 29 4.9 4OH1-A nrPDB 29 5.4 1U5T-B nrPDB 29 6.9 3V2G-A nrPDB 29 7.0 2D0I-A nrPDB 29 7.5 5CEE-A nrPDB 29 8.2 3KYB-A nrPDB 29 8.5 2VJM-A nrPDB 29 10.0 >3VH2-A nrPDB Length = 616 Score = 1066 bits (2757), Expect = 0.0, Method: Composition-based stats. Identities = 613/613 (100%), Positives = 613/613 (100%) Query: 1 MSSERVLSYAPAFKSFLDTSFFQELSRLKLDVLKLDSTCQPLTVNLDLHNIPKSADQVPL 60 MSSERVLSYAPAFKSFLDTSFFQELSRLKLDVLKLDSTCQPLTVNLDLHNIPKSADQVPL Sbjct: 4 MSSERVLSYAPAFKSFLDTSFFQELSRLKLDVLKLDSTCQPLTVNLDLHNIPKSADQVPL 63 Query: 61 FLTNRSFEKHNNKRTNEVPLQGSIFNFNVLDEFKNLDKQLFLHQRALECWEDGIKDINKC 120 FLTNRSFEKHNNKRTNEVPLQGSIFNFNVLDEFKNLDKQLFLHQRALECWEDGIKDINKC Sbjct: 64 FLTNRSFEKHNNKRTNEVPLQGSIFNFNVLDEFKNLDKQLFLHQRALECWEDGIKDINKC 123 Query: 121 VSFVIISFADLKKYRFYYWLGVPCFQRPSSTVLHVRPEPSLKGLFSKCQKWFDVNYSKWV 180 VSFVIISFADLKKYRFYYWLGVPCFQRPSSTVLHVRPEPSLKGLFSKCQKWFDVNYSKWV Sbjct: 124 VSFVIISFADLKKYRFYYWLGVPCFQRPSSTVLHVRPEPSLKGLFSKCQKWFDVNYSKWV 183 Query: 181 CILDADDEIVNYDKCIIRKTKVLAIRDTSTMENVPSALTKNFLSVLQYDVPDLIDFKLLI 240 CILDADDEIVNYDKCIIRKTKVLAIRDTSTMENVPSALTKNFLSVLQYDVPDLIDFKLLI Sbjct: 184 CILDADDEIVNYDKCIIRKTKVLAIRDTSTMENVPSALTKNFLSVLQYDVPDLIDFKLLI 243 Query: 241 IRQNEGSFALNATFASIDPQSSSSNPDMKVSGWERNVQGKLAPRVVDLSSLLDPLKIADQ 300 IRQNEGSFALNATFASIDPQSSSSNPDMKVSGWERNVQGKLAPRVVDLSSLLDPLKIADQ Sbjct: 244 IRQNEGSFALNATFASIDPQSSSSNPDMKVSGWERNVQGKLAPRVVDLSSLLDPLKIADQ 303 Query: 301 SVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVS 360 SVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVS Sbjct: 304 SVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVS 363 Query: 361 YSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDF 420 YSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDF Sbjct: 364 YSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDF 423 Query: 421 DRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINAALGFDSYLVMRHGNRDEQSS 480 DRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINAALGFDSYLVMRHGNRDEQSS Sbjct: 424 DRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINAALGFDSYLVMRHGNRDEQSS 483 Query: 481 KQLGCYFCHDVVAPTDSLTDRTLDQMCTVTRPGVAMMASSLAVELMTSLLQTKYSGSETT 540 KQLGCYFCHDVVAPTDSLTDRTLDQMCTVTRPGVAMMASSLAVELMTSLLQTKYSGSETT Sbjct: 484 KQLGCYFCHDVVAPTDSLTDRTLDQMCTVTRPGVAMMASSLAVELMTSLLQTKYSGSETT 543 Query: 541 VLGDIPHQIRGFLHNFSILKLETPAYEHCPACSPKVIEAFTDLGWEFVKKALEHPLYLEE 600 VLGDIPHQIRGFLHNFSILKLETPAYEHCPACSPKVIEAFTDLGWEFVKKALEHPLYLEE Sbjct: 544 VLGDIPHQIRGFLHNFSILKLETPAYEHCPACSPKVIEAFTDLGWEFVKKALEHPLYLEE 603 Query: 601 ISGLSVIKQEVER 613 ISGLSVIKQEVER Sbjct: 604 ISGLSVIKQEVER 616 >3T7E-A nrPDB Length = 344 Score = 634 bits (1635), Expect = 0.0, Method: Composition-based stats. Identities = 342/342 (100%), Positives = 342/342 (100%) Query: 289 SSLLDPLKIADQSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGV 348 SSLLDPLKIADQSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGV Sbjct: 3 SSLLDPLKIADQSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGV 62 Query: 349 RKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSIPMIGH 408 RKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSIPMIGH Sbjct: 63 RKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSIPMIGH 122 Query: 409 KLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINAALGFDSYL 468 KLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINAALGFDSYL Sbjct: 123 KLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINAALGFDSYL 182 Query: 469 VMRHGNRDEQSSKQLGCYFCHDVVAPTDSLTDRTLDQMCTVTRPGVAMMASSLAVELMTS 528 VMRHGNRDEQSSKQLGCYFCHDVVAPTDSLTDRTLDQMCTVTRPGVAMMASSLAVELMTS Sbjct: 183 VMRHGNRDEQSSKQLGCYFCHDVVAPTDSLTDRTLDQMCTVTRPGVAMMASSLAVELMTS 242 Query: 529 LLQTKYSGSETTVLGDIPHQIRGFLHNFSILKLETPAYEHCPACSPKVIEAFTDLGWEFV 588 LLQTKYSGSETTVLGDIPHQIRGFLHNFSILKLETPAYEHCPACSPKVIEAFTDLGWEFV Sbjct: 243 LLQTKYSGSETTVLGDIPHQIRGFLHNFSILKLETPAYEHCPACSPKVIEAFTDLGWEFV 302 Query: 589 KKALEHPLYLEEISGLSVIKQEVERLGNDVFEWEDDESDEIA 630 KKALEHPLYLEEISGLSVIKQEVERLGNDVFEWEDDESDEIA Sbjct: 303 KKALEHPLYLEEISGLSVIKQEVERLGNDVFEWEDDESDEIA 344 >3T7H-A nrPDB Length = 291 Score = 469 bits (1208), Expect = e-132, Method: Composition-based stats. Identities = 288/289 (99%), Positives = 288/289 (99%) Query: 1 MSSERVLSYAPAFKSFLDTSFFQELSRLKLDVLKLDSTCQPLTVNLDLHNIPKSADQVPL 60 MSSERVLSYAPAFKSFLDTSFFQELSRLKLDVLKLDSTCQPLTVNLDLHNIPKSADQVPL Sbjct: 3 MSSERVLSYAPAFKSFLDTSFFQELSRLKLDVLKLDSTCQPLTVNLDLHNIPKSADQVPL 62 Query: 61 FLTNRSFEKHNNKRTNEVPLQGSIFNFNVLDEFKNLDKQLFLHQRALECWEDGIKDINKC 120 FLTNRSFEKHNNKRTNEVPLQGSIFNFNVLDEFKNLDKQLFLHQRALECWEDGIKDINKC Sbjct: 63 FLTNRSFEKHNNKRTNEVPLQGSIFNFNVLDEFKNLDKQLFLHQRALECWEDGIKDINKC 122 Query: 121 VSFVIISFADLKKYRFYYWLGVPCFQRPSSTVLHVRPEPSLKGLFSKCQKWFDVNYSKWV 180 VSFVIISFADLKKYRFYYWLGVPCFQRPSSTVLHVRPEPSLKGLFSKCQKWFDVNYSKWV Sbjct: 123 VSFVIISFADLKKYRFYYWLGVPCFQRPSSTVLHVRPEPSLKGLFSKCQKWFDVNYSKWV 182 Query: 181 CILDADDEIVNYDKCIIRKTKVLAIRDTSTMENVPSALTKNFLSVLQYDVPDLIDFKLLI 240 CILDADDEIVNYDKCIIRKTKVLAIRDTSTMENVPSALTKNFLSVLQYDVPDLIDFKLLI Sbjct: 183 CILDADDEIVNYDKCIIRKTKVLAIRDTSTMENVPSALTKNFLSVLQYDVPDLIDFKLLI 242 Query: 241 IRQNEGSFALNATFASIDPQSSSSNPDMKVSGWERNVQGKLAPRVVDLS 289 IRQNEGSFALNATFASIDPQSSSSNPDMKVSGWERNVQGKLA RVVDLS Sbjct: 243 IRQNEGSFALNATFASIDPQSSSSNPDMKVSGWERNVQGKLADRVVDLS 291 >3VX8-D nrPDB Length = 323 Score = 357 bits (915), Expect = 1e-98, Method: Composition-based stats. Identities = 81/321 (25%), Positives = 146/321 (45%), Gaps = 39/321 (12%) Query: 6 VLSYAPAFKSFLDTSFFQELSRLKLDVLKLDSTCQPLTVNLDLHNIPKSADQVPLFLTNR 65 +L +AP S +D F+ S LKLD L +D + +T P+ ++ + L + Sbjct: 8 ILQFAP-LNSSVDEGFWHSFSSLKLDKLGIDDSPISITGFYGPCGHPQVSNHLTLLSESL 66 Query: 66 SFEK--------HNNKRTNEVPLQGSIFNFNVLDEFKNLDKQLFLHQRALECWED----- 112 ++ H N+ N+ P+ G ++N N ++ F LDKQ L A + WED Sbjct: 67 PLDEQSLIASTSHGNR--NKCPVPGILYNTNTVESFNKLDKQSLLKAEANKIWEDIQSGK 124 Query: 113 GIKDINKCVSFVIISFADLKKYRFYYWLGVPCFQ-RPSSTVLHVRPEPSL------KGLF 165 ++D + F++ISFADLKK+ F YW P F P +++ ++P + + Sbjct: 125 ALEDPSVLPRFLVISFADLKKWSFRYWFAFPAFVLDPPVSLIELKPASEYFSSEEAESVS 184 Query: 166 SKCQKWFDVNYSK----WVCILDADDE-----IVNYDKCIIRKTKVL-AIRDTSTMENVP 215 + C W D + + ++ + +D + + + + C K+L D + + P Sbjct: 185 AACNDWRDSDLTTDVPFFLVSVSSDSKASIRHLKDLEACQGDHQKLLFGFYDPCHLPSNP 244 Query: 216 SALTKNFLSVLQYDVPDLIDFKLLIIRQNEGSFALNATF---ASIDPQSSSSNPDMKVS- 271 +N+L++++ +L R++ G LN + ASI S S + S Sbjct: 245 GWPLRNYLALIRSRW-NLETVWFFCYRESRGFADLNLSLVGQASITLSSGESAETVPNSV 303 Query: 272 GWERNVQGKLAPRVVDLSSLL 292 GWE N +GK PR + L++ + Sbjct: 304 GWELN-KGKRVPRSISLANSM 323 >3VX6-A nrPDB Length = 283 Score = 352 bits (903), Expect = 3e-97, Method: Composition-based stats. Identities = 108/293 (36%), Positives = 174/293 (59%), Gaps = 23/293 (7%) Query: 7 LSYAPAFKSFLDTSFFQELSRLKLDVLKLDSTCQPLTVNLDLHNIPKSADQVPLFLTNRS 66 L +AP+F+SF+D+SFF ELSRLKLD+ KLDS + L LDL+ +++ + + L + S Sbjct: 9 LKFAPSFQSFVDSSFFHELSRLKLDIFKLDSDEKALYTQLDLNQF--TSNVLAISLRDDS 66 Query: 67 FEKHNNKRTNEVPLQGSIFNFNVLDEFKNLDKQLFLHQRALECWEDGIK-DINKCVSFVI 125 F+K +N N + L+G + NFN ++ FKN +K F+ ++ E + G++ D+N+ +SF + Sbjct: 67 FQKPDNDEHN-IILKGYLLNFNTIELFKNCNKIQFIKEKGQELLQRGLENDLNEIISFYM 125 Query: 126 ISFADLKKYRFYYWLGVPCFQRPSSTVLHVRPEPSLKGLFSKCQKWFDVNYSKW----VC 181 ISFADLKKY+FYYW+ +P FQ +T + S K + S V++ K C Sbjct: 126 ISFADLKKYKFYYWICMPSFQSDGATYQII----SSKVIASDSD--ISVSFIKQNVIIAC 179 Query: 182 ILDADDEIVNYDKCIIRKTKVLAIRDTSTMENVPSALTKNFLSVLQYDVPDLIDFKLLII 241 ++ + D ++ + + +D S ++++PSA+TKN L+V P + + + Sbjct: 180 VISGVIQKATPDN--LKVCEKVVFKDFSHLKDIPSAVTKNILTVWSKLSPR-ETYTICFL 236 Query: 242 RQNEGSFALNATFASIDPQSSSSNPDMKVSGWERNVQGKLAPRVVDLSSLLDP 294 R +E SF ++ +NP +KVSGWE+N GKLAP+ +DLSSL+DP Sbjct: 237 RSDESSFEAEIII------NNGNNPSLKVSGWEKNGLGKLAPKSIDLSSLMDP 283 >1JWB-B nrPDB Length = 249 Score = 148 bits (374), Expect = 6e-36, Method: Composition-based stats. Identities = 46/148 (31%), Positives = 72/148 (48%), Gaps = 15/148 (10%) Query: 296 KIADQSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVD 355 +++DQ + + + R + +K+++VL++G G LGC S+ L + GV +T +D Sbjct: 3 ELSDQEMLRYNRQIILRGFDFDGQEALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLD 62 Query: 356 NGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEA 415 TVS SN RQ L++ G+PK E A +L RI P + T V + Sbjct: 63 FDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL------------ 110 Query: 416 QHKDFDRLRALIKEHDIIFLLVDSRESR 443 D L ALI EHD++ D+ R Sbjct: 111 ---DDAELAALIAEHDLVLDCTDNVAVR 135 >4P22-A nrPDB Length = 446 Score = 131 bits (330), Expect = 7e-31, Method: Composition-based stats. Identities = 31/139 (22%), Positives = 57/139 (41%), Gaps = 23/139 (16%) Query: 263 SSNPDMKVSGWERNVQGKLAPRVVDLSSLLDPLKIADQSVDLNLKLMKWRILPDLNLDII 322 S P + +G +N ++ +D L + +L + + Sbjct: 38 SEVPSVPTNGMAKNG--------------------SEADIDEGLYSRQLYVLGHEAMKRL 77 Query: 323 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAEL 382 + + VL+ G LG +++ +I GV+ +T D GT +++ Q ED GK +AE+ Sbjct: 78 QTSSVLVSGLRGLGVEIAKNIILGGVKAVTLHDQGTAQWADLSSQFYLREEDIGKNRAEV 137 Query: 383 AA---ASLKRIFPLMDATG 398 + A L P+ TG Sbjct: 138 SQPRLAELNSYVPVTAYTG 156 >3KYD-B nrPDB Length = 551 Score = 115 bits (289), Expect = 4e-26, Method: Composition-based stats. Identities = 33/132 (25%), Positives = 64/132 (48%), Gaps = 14/132 (10%) Query: 312 RILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYN 371 R LP + + +VL++GAG +GC + + L+ G I +D T+ SN RQ L+ Sbjct: 7 RGLPRELAEAVAGGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQ 66 Query: 372 FEDCGKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHD 431 + G+ KA++A S+ + +P K +I ++N + + F ++ Sbjct: 67 KKHVGRSKAQVAKESVLQFYP-------KANIVAYHDSIMNPDYNVEFF-------RQFI 112 Query: 432 IIFLLVDSRESR 443 ++ +D+R +R Sbjct: 113 LVMNALDNRAAR 124 >3KYC-B nrPDB Length = 660 Score = 115 bits (289), Expect = 4e-26, Method: Composition-based stats. Identities = 33/132 (25%), Positives = 64/132 (48%), Gaps = 14/132 (10%) Query: 312 RILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYN 371 R LP + + +VL++GAG +GC + + L+ G I +D T+ SN RQ L+ Sbjct: 25 RGLPRELAEAVAGGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQ 84 Query: 372 FEDCGKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHD 431 + G+ KA++A S+ + +P K +I ++N + + F ++ Sbjct: 85 KKHVGRSKAQVAKESVLQFYP-------KANIVAYHDSIMNPDYNVEFF-------RQFI 130 Query: 432 IIFLLVDSRESR 443 ++ +D+R +R Sbjct: 131 LVMNALDNRAAR 142 >3H5A-A nrPDB Length = 358 Score = 114 bits (286), Expect = 9e-26, Method: Composition-based stats. Identities = 30/89 (33%), Positives = 49/89 (55%) Query: 315 PDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFED 374 P L D +KN KV++LG G +G +VS L G+ +I +DN + +N RQ L++ +D Sbjct: 106 PVLVQDKLKNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDD 165 Query: 375 CGKPKAELAAASLKRIFPLMDATGVKLSI 403 GK K E+ L + + + + L+I Sbjct: 166 VGKNKTEVIKRELLKRNSEISVSEIALNI 194 >6CWZ-C nrPDB Length = 346 Score = 109 bits (273), Expect = 3e-24, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 45/90 (50%) Query: 307 KLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVR 366 + R+ ++ ++VLL+G LG +++ LI GV+ +T +D+ V+ +P Sbjct: 19 YDRQIRLWGLEAQKRLRASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGA 78 Query: 367 QALYNFEDCGKPKAELAAASLKRIFPLMDA 396 Q L G+ +AE + + + P++D Sbjct: 79 QFLIRTGSVGRNRAEASLERAQNLNPMVDV 108 >2NVU-B nrPDB Length = 805 Score = 109 bits (272), Expect = 4e-24, Method: Composition-based stats. Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 15/134 (11%) Query: 321 IIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKA 380 ++ KVL++GAG LGC + + L G R+I +D T+ SN RQ L+ +D G+PKA Sbjct: 408 LLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKA 467 Query: 381 ELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSR 440 E+AA L P + +P + ++ F H I+ L Sbjct: 468 EVAAEFLNDRVPNCNV------VPHFNKIQDFNDTFYRQF---------HIIVCGLDSII 512 Query: 441 ESRWLPSLLSNIEN 454 RW+ +L ++ N Sbjct: 513 ARRWINGMLISLLN 526 >1YOV-B nrPDB Length = 444 Score = 109 bits (272), Expect = 4e-24, Method: Composition-based stats. Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 15/134 (11%) Query: 321 IIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKA 380 ++ KVL++GAG LGC + + L G R+I +D T+ SN RQ L+ +D G+PKA Sbjct: 47 LLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKA 106 Query: 381 ELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSR 440 E+AA L P + +P + ++ F H I+ L Sbjct: 107 EVAAEFLNDRVPNCNV------VPHFNKIQDFNDTFYRQF---------HIIVCGLDSII 151 Query: 441 ESRWLPSLLSNIEN 454 RW+ +L ++ N Sbjct: 152 ARRWINGMLISLLN 165 >5FF5-A nrPDB Length = 381 Score = 104 bits (259), Expect = 1e-22, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 47/121 (38%), Gaps = 13/121 (10%) Query: 315 PDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFED 374 P + + +K +KV + G G G + + L G+ + +D V SN RQ LY +D Sbjct: 123 PFVYQERLKQSKVAIFGMGGWGTWCALQLAMSGIGTLRLIDGDDVELSNINRQVLYRTDD 182 Query: 375 CGKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIF 434 GK K + A ++ + H E D RL L+ + I Sbjct: 183 VGKNKVDAAKDTILAYNENV-------------HVETFFEFASPDRARLEELVGDSTFII 229 Query: 435 L 435 L Sbjct: 230 L 230 >1ZFN-A nrPDB Length = 253 Score = 98.6 bits (244), Expect = 7e-21, Method: Composition-based stats. Identities = 44/192 (22%), Positives = 81/192 (42%), Gaps = 26/192 (13%) Query: 301 SVDLNLKLMKWRILPDLNLD---IIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 357 D + +L D+ LD + +++VL++G G LG + L GV + D+ Sbjct: 5 DRDFMRYSRQI-LLDDIALDGQQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD 63 Query: 358 TVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQH 417 V SN RQ L+ ED +PK++++ L ++ P + T ++ Q Sbjct: 64 DVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQ---------------QR 108 Query: 418 KDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINA-ALGFDSYLVMRHGNRD 476 + L+ + D++ D+ +R + N +I A A+GF L++ + Sbjct: 109 LTGEALKDAVARADVVLDCTDNMATRQEINAACVALNTPLITASAVGFGGQLMVLTPPWE 168 Query: 477 EQSSKQLGCYFC 488 + GCY C Sbjct: 169 Q------GCYRC 174 >4RDI-A nrPDB Length = 288 Score = 74.4 bits (181), Expect = 2e-13, Method: Composition-based stats. Identities = 24/88 (27%), Positives = 43/88 (48%) Query: 312 RILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYN 371 R+ + L + + + ++G G +G + + AL G+ IT +D V +N RQ Sbjct: 38 RLYGEKALQLFADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHAL 97 Query: 372 FEDCGKPKAELAAASLKRIFPLMDATGV 399 ++ G KAE+ A +++I P T V Sbjct: 98 RDNVGLAKAEVMAERIRQINPECRVTVV 125 >1TT5-A nrPDB Length = 531 Score = 73.2 bits (178), Expect = 3e-13, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 38/98 (38%) Query: 302 VDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSY 361 + + R+ D + +++ V L+ A G + + L+ G+ T +D VS Sbjct: 10 LKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSG 69 Query: 362 SNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV 399 + GK +AE A L+ + + + V Sbjct: 70 EDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFV 107 >5IAA-A nrPDB Length = 290 Score = 50.9 bits (120), Expect = 2e-06, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 84/216 (38%), Gaps = 16/216 (7%) Query: 320 DIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPK 379 + I+ V ++G G +G + L G+ K+ D V +N R + G K Sbjct: 13 EKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLF-FQPHQAGLSK 71 Query: 380 AELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEH---DIIFLL 436 + A +L+ I P + +I + E QH ++E D++ Sbjct: 72 VQAAEHTLRNINPDVLFEVHNYNITTV------ENFQHFMDRISNGGLEEGKPVDLVLSC 125 Query: 437 VDSRESRWLPSLLSNIENKTVINAALGFDSYLVMRHGNRDEQSSKQLGCYFCHDVVAPTD 496 VD+ E+R + N +T + + + ++ G+ + C+ C + Sbjct: 126 VDNFEARMTINTACNELGQTWMESGVSENAV----SGHIQLIIPGESACFACAPPLVVAA 181 Query: 497 SLTDRTLDQ--MCTVTRPGVAMMASSLAVELMTSLL 530 ++ ++TL + +C + P + + + V+ + L Sbjct: 182 NIDEKTLKREGVCAASLPTTMGVVAGILVQNVLKFL 217 >4K28-A nrPDB Length = 269 Score = 36.2 bits (82), Expect = 0.045, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 18/37 (48%) Query: 323 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 359 + L++G G +G ++ AL G+ IT D T Sbjct: 124 AGKRALVIGCGGVGSAIAYALAEAGIASITLCDPSTA 160 >5ILO-A nrPDB Length = 271 Score = 35.5 bits (80), Expect = 0.078, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 8/78 (10%) Query: 327 VLLLGAGTLGCYVSRALIAWGVRKITFVDNGT-------VSYSNPVRQALYNFEDCGKPK 379 V+ GAG +G VS+ L+A G K+ +D + ++P + + D K Sbjct: 19 VVTGGAGGIGLQVSKQLLAAGAAKVAIIDLQDNLEEFVKLRAAHPTQSVMIIKMDVANKK 78 Query: 380 -AELAAASLKRIFPLMDA 396 E + + F +D Sbjct: 79 GVEATYEEIAKTFGNIDI 96 >3VQI-A nrPDB Length = 274 Score = 31.6 bits (70), Expect = 1.1, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 9/83 (10%) Query: 225 VLQYDVPDLIDFKLLIIRQNEGSFALNATFASIDPQSSSSNPDMKVSGWERN--VQGKLA 282 ++ +PD +F + I+ +N F S + + V W N V Sbjct: 161 IMSLSIPDFENFWVSILSRNRSDFMA----VRSKLFSMNKAKSLPVRVWTSNYAVLQPTV 216 Query: 283 P---RVVDLSSLLDPLKIADQSV 302 P + + ++ LLD +K++ V Sbjct: 217 PVTDKELSVAELLDSIKLSSDGV 239 >1PJ5-A nrPDB Length = 830 Score = 31.2 bits (69), Expect = 1.4, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 20/34 (58%) Query: 324 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 357 +++++GAG +G ++ L+ G IT +D G Sbjct: 4 TPRIVIIGAGIVGTNLADELVTRGWNNITVLDQG 37 >2GF2-A nrPDB Length = 296 Score = 31.2 bits (69), Expect = 1.6, Method: Composition-based stats. Identities = 15/105 (14%), Positives = 36/105 (34%), Gaps = 2/105 (1%) Query: 327 VLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV--SYSNPVRQALYNFEDCGKPKAELAA 384 V +G G +G +++ L+ G I + + + Q + + D + + Sbjct: 3 VGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIIT 62 Query: 385 ASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKE 429 I + +G + + + ++ D + L KE Sbjct: 63 MLPTSINAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKE 107 >2Q1T-A nrPDB Length = 377 Score = 29.7 bits (65), Expect = 4.0, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%) Query: 317 LNLDIIKNTKVLLLG-AGTLGCYVSRALIAWGVRKITFVDN 356 +N + NT V+++G AG +G + + L+ GV ++ VDN Sbjct: 25 MNASKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDN 65 >1W7P-D nrPDB Length = 566 Score = 29.7 bits (65), Expect = 4.4, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 3/46 (6%) Query: 89 VLDEFKNLDKQLFLHQRALECWEDGI---KDINKCVSFVIISFADL 131 +LD K L+K+LFL + A E +E + KD+N +++II+ DL Sbjct: 395 ILDREKFLNKELFLDEIAREIYEFTLSEFKDLNSDTNYMIITLVDL 440 >3FDG-A nrPDB Length = 355 Score = 29.3 bits (64), Expect = 4.9, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 4/78 (5%) Query: 197 IRKTKVLAIRDTSTMENVPSALTKNFLSVLQYDVPDLIDFKLLIIRQNEGSFALNATFAS 256 + D + + + P T + + +L D +L +IR++ G LN + Sbjct: 208 LSHLNEKGFDDVARLSDAPLVATHSNAHAVTPSTRNLTDRQLAMIRESRGMVGLNFATSF 267 Query: 257 IDPQSSSSNPDMKVSGWE 274 + S GWE Sbjct: 268 LREDGRRSAE----MGWE 281 >4OH1-A nrPDB Length = 351 Score = 29.3 bits (64), Expect = 5.4, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 15/39 (38%) Query: 317 LNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVD 355 I V ++GAG LG + + G IT D Sbjct: 167 EQAKISYGKSVAIMGAGGLGMMLVQLARLAGASTITVFD 205 >1U5T-B nrPDB Length = 169 Score = 28.9 bits (63), Expect = 6.9, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 3/45 (6%) Query: 90 LDEFKNLDKQLFLHQRALECWEDGI---KDINKCVSFVIISFADL 131 LD K L+K+LFL + A E +E + KD+N +++II+ DL Sbjct: 1 LDREKFLNKELFLDEIAREIYEFTLSEFKDLNSDTNYMIITLVDL 45 >3V2G-A nrPDB Length = 271 Score = 28.9 bits (63), Expect = 7.0, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 35/104 (33%), Gaps = 11/104 (10%) Query: 331 GAGTLGCYVSRALIAWG----VRKITFVDNGTVSYSNP----VRQALYNFEDCGKPKAEL 382 G+ +G +++ L G + + + S R ++ AE Sbjct: 39 GSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADN---RDAEA 95 Query: 383 AAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRAL 426 +++ + + ++ I H EE DFD + A+ Sbjct: 96 IEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAV 139 >2D0I-A nrPDB Length = 333 Score = 28.9 bits (63), Expect = 7.5, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Query: 290 SLLDPLKIADQSVDLNLKLMKWRI-LPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGV 348 +L+ + AD+ + +I ++ + KV +LG G +G ++R LI +GV Sbjct: 111 NLMRKIHYADKFIRRGEWESHAKIWTGFKRIESLYGKKVGILGMGAIGKAIARRLIPFGV 170 Query: 349 R 349 + Sbjct: 171 K 171 >5CEE-A nrPDB Length = 413 Score = 28.5 bits (62), Expect = 8.2, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 21/38 (55%) Query: 318 NLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVD 355 I++ +V++ GAG+ G +++ L+ V + VD Sbjct: 201 VKKSIEDVQVVINGAGSAGMAIAKMLLLLKVNNVVLVD 238 >3KYB-A nrPDB Length = 390 Score = 28.5 bits (62), Expect = 8.5, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 41/124 (33%), Gaps = 17/124 (13%) Query: 322 IKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG--------TVSYSNPVRQALYNFE 373 +K+ K+L++GAG G + R L G ++ +D S Sbjct: 1 MKSKKILIVGAGFSGAVIGRQLAEKG-HQVHIIDQRDHIGGNSYDARDSETNVMVHVYGP 59 Query: 374 DCGKPKAELAAASLKRIFPLMDA--------TGVKLSIPMIGHKLVNEEAQHKDFDRLRA 425 E + + +M G S+P+ H + ++ D RA Sbjct: 60 HIFHTDNETVWNYINKHAEMMPYVNRVKATVNGQVFSLPINLHTINQFFSKTCSPDEARA 119 Query: 426 LIKE 429 LI E Sbjct: 120 LIAE 123 >2VJM-A nrPDB Length = 428 Score = 28.5 bits (62), Expect = 10.0, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 5/74 (6%) Query: 96 LDKQLFLHQRALECWEDGIKDINKCVSFVIISFADLKKYRFYYW---LGVPCFQRPSSTV 152 +DK + A +E + + SF+ FAD K+ W G+PC P ++ Sbjct: 296 IDKPEWKDDPAYNTFEGRVDKLMDIFSFIETKFADKDKFEVTEWAAQYGIPC--GPVMSM 353 Query: 153 LHVRPEPSLKGLFS 166 + +PSL+ + + Sbjct: 354 KELAHDPSLQKVGT 367 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.315 0.131 0.353 Lambda K H 0.267 0.0402 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 22,667,577 Number of Sequences: 36641 Number of extensions: 883572 Number of successful extensions: 2325 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 41 Number of HSP's successfully gapped in prelim test: 21 Number of HSP's that attempted gapping in prelim test: 2255 Number of HSP's gapped (non-prelim): 65 length of query: 630 length of database: 10,336,785 effective HSP length: 103 effective length of query: 527 effective length of database: 6,562,762 effective search space: 3458575574 effective search space used: 3458575574 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 62 (28.5 bits)