BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P38805 (295 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6C0F-I nrPDB 598 e-171 5WLC-SM nrPDB 110 5e-25 1Y8C-A nrPDB 31 0.71 3MEW-A nrPDB 28 3.2 3KY9-A nrPDB 28 4.1 3JCT-v nrPDB 28 4.4 3MEA-A nrPDB 28 4.6 3DLX-A nrPDB 28 7.0 6C0F-v nrPDB 27 7.4 3LX7-A nrPDB 27 7.4 >6C0F-I nrPDB Length = 295 Score = 598 bits (1541), Expect = e-171, Method: Compositional matrix adjust. Identities = 295/295 (100%), Positives = 295/295 (100%) Query: 1 MALGNEINITNKLKRQEIFADIKHEKNKERHTMRRKRAKEERENPELREQRLKENVTQTI 60 MALGNEINITNKLKRQEIFADIKHEKNKERHTMRRKRAKEERENPELREQRLKENVTQTI Sbjct: 1 MALGNEINITNKLKRQEIFADIKHEKNKERHTMRRKRAKEERENPELREQRLKENVTQTI 60 Query: 61 ENTRVYDETINKEVEGDEDDLMRYFNSNSNEPPKIFLTTNVNAKKSAYEFANILIEILPN 120 ENTRVYDETINKEVEGDEDDLMRYFNSNSNEPPKIFLTTNVNAKKSAYEFANILIEILPN Sbjct: 61 ENTRVYDETINKEVEGDEDDLMRYFNSNSNEPPKIFLTTNVNAKKSAYEFANILIEILPN 120 Query: 121 VTFVKRKFGYKLKEISDICIKRNFTDIVIINEDKKKVTGLTFIHLPEGPTFYFKLSSFVE 180 VTFVKRKFGYKLKEISDICIKRNFTDIVIINEDKKKVTGLTFIHLPEGPTFYFKLSSFVE Sbjct: 121 VTFVKRKFGYKLKEISDICIKRNFTDIVIINEDKKKVTGLTFIHLPEGPTFYFKLSSFVE 180 Query: 181 VKKIVGHGRPTSHIPELILNNFQTRLGQTVGRLFQSILPQNPDIEGRQVITLHNQRDYIF 240 VKKIVGHGRPTSHIPELILNNFQTRLGQTVGRLFQSILPQNPDIEGRQVITLHNQRDYIF Sbjct: 181 VKKIVGHGRPTSHIPELILNNFQTRLGQTVGRLFQSILPQNPDIEGRQVITLHNQRDYIF 240 Query: 241 FRRHRYVFKDNERVGLQELGPQFTLKLKRLQRGIKEETEWEHKPEMDKEKKKFYL 295 FRRHRYVFKDNERVGLQELGPQFTLKLKRLQRGIKEETEWEHKPEMDKEKKKFYL Sbjct: 241 FRRHRYVFKDNERVGLQELGPQFTLKLKRLQRGIKEETEWEHKPEMDKEKKKFYL 295 >5WLC-SM nrPDB Length = 290 Score = 110 bits (276), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 73/237 (30%), Positives = 119/237 (50%), Gaps = 11/237 (4%) Query: 66 YDETINKEVEGDE---DDLMRYFNSNSNEPPKIFLTTNVNAKKSAYEFANILIEILPNVT 122 YD+++ + E D+ DD Y ++ P+I +TT+ + +FA + + PN Sbjct: 58 YDQSLKESEEADDLQVDD--EYAATSGIMDPRIIVTTSRDPSTRLSQFAKEIKLLFPNAV 115 Query: 123 FVKRKFGYKLKEISDICIKRNFTDIVIINEDKKKVTGLTFIHLPEGPTFYFKLSSFVEVK 182 + R Y + + D C K TD+V+++E + T LT H P GPT F L + V Sbjct: 116 RLNRG-NYVMPNLVDACKKSGTTDLVVLHEHRGVPTSLTISHFPHGPTAQFSLHNVVMRH 174 Query: 183 KIVGHGRPTSHIPELILNNFQTRLGQTVGRLFQSILPQNPDIEGRQVITLHNQRDYIFFR 242 I+ G + P LI +NF T LG+ V + + + P + +VIT N+ D+I R Sbjct: 175 DIINAGNQSEVNPHLIFDNFTTALGKRVVCILKHLFNAGPKKDSERVITFANRGDFISVR 234 Query: 243 RHRYVFKDNERVGLQELGPQFTLKLKRLQRGIKE----ETEWEHKPEMDKEKKKFYL 295 +H YV + E V + E+GP+F ++L L+ G E + EW+ + + KK YL Sbjct: 235 QHVYV-RTREGVEIAEVGPRFEMRLFELRLGTLENKDADVEWQLRRFIRTANKKDYL 290 >1Y8C-A nrPDB Length = 246 Score = 30.8 bits (68), Expect = 0.71, Method: Compositional matrix adjust. Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 9/65 (13%) Query: 132 LKEISDICIKRNF---------TDIVIINEDKKKVTGLTFIHLPEGPTFYFKLSSFVEVK 182 ++IS++ I R F T+ +I ++D KK HL EG F F ++S+ ++ Sbjct: 90 CQDISNLNINRKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINSYYKLS 149 Query: 183 KIVGH 187 +++G+ Sbjct: 150 QVLGN 154 >3MEW-A nrPDB Length = 159 Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust. Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 12/89 (13%) Query: 8 NITNKLKRQEIFADIKHEKNKERHTMRRKRA---KEERENPELREQRL--KENVTQTI-- 60 + TNK + +I E+ KERHT+ R+R + + NPE + L KE + + Sbjct: 57 HATNKYEVDDI-----DEEGKERHTLSRRRVIPLPQWKANPETDPEALFQKEQLVLALYP 111 Query: 61 ENTRVYDETINKEVEGDEDDLMRYFNSNS 89 + T Y I+ + +DD F S Sbjct: 112 QTTCFYRALIHAPPQRPQDDYSVLFEDTS 140 >3KY9-A nrPDB Length = 587 Score = 28.1 bits (61), Expect = 4.1, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 5/47 (10%) Query: 52 LKENVTQTIE-NTRVYDETINKEVEGDE--DDLMRYFNSNSNEPPKI 95 L + + T+E + +YD N+E EGDE +DLMR + + PPK+ Sbjct: 148 LSDQIDDTVEEDEDLYDCVENEEAEGDEIYEDLMR--SEPVSMPPKM 192 >3JCT-v nrPDB Length = 344 Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust. Identities = 44/181 (24%), Positives = 80/181 (44%), Gaps = 46/181 (25%) Query: 120 NVTFVKRKFGYKLKEISDICIKRNFTDIVIINEDKKKVTGLTFIHLPEGPTFYFKLSSFV 179 N+TF+ R FGYK+ ++ ++ + NF ++++ KK LTF + P F F+ ++F Sbjct: 99 NMTFI-RTFGYKIYDMIELMVADNFK---LLSDFKK----LTFT-VGLKPMFTFQGAAF- 148 Query: 180 EVKKIVGHGRPT-SHIPELILNNFQTRLGQTVGRLFQSILPQNPDIEGRQ-VITLHNQRD 237 P I L L+ F+ G++ D+ G Q VI++ Q D Sbjct: 149 -------DTHPVYKQIKSLFLDFFR---GESTDL---------QDVAGLQHVISMTIQGD 189 Query: 238 Y--------IFFRRHRY-VFKDNE------RVGLQELGPQFTLKLKRLQRGIKEETEWEH 282 + + FR ++ +K ++ R+ L E+GP+ K+ R+ + H Sbjct: 190 FQDGEPLPNVLFRVYKLKSYKSDQGGKRLPRIELVEIGPRLDFKIGRIHTPSPDMVTEAH 249 Query: 283 K 283 K Sbjct: 250 K 250 >3MEA-A nrPDB Length = 180 Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust. Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 12/89 (13%) Query: 8 NITNKLKRQEIFADIKHEKNKERHTMRRKRA---KEERENPELREQRL--KENVTQTI-- 60 + TNK + +I E+ KERHT+ R+R + + NPE + L KE + + Sbjct: 74 HATNKYEVDDI-----DEEGKERHTLSRRRVIPLPQWKANPETDPEALFQKEQLVLALYP 128 Query: 61 ENTRVYDETINKEVEGDEDDLMRYFNSNS 89 + T Y I+ + +DD F S Sbjct: 129 QTTCFYRALIHAPPQRPQDDYSVLFEDTS 157 >3DLX-A nrPDB Length = 489 Score = 27.7 bits (60), Expect = 7.0, Method: Compositional matrix adjust. Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 2/32 (6%) Query: 139 CIKRNFTDIVIINEDKKKVTGLTFIHLPEGPT 170 C+ R T+ + + DKKK GLT I L EG T Sbjct: 427 CVNRIITEKAVFDVDKKK--GLTLIELWEGLT 456 >6C0F-v nrPDB Length = 453 Score = 27.3 bits (59), Expect = 7.4, Method: Compositional matrix adjust. Identities = 11/21 (52%), Positives = 16/21 (76%) Query: 254 VGLQELGPQFTLKLKRLQRGI 274 + L ELGP+ TLKL +++ GI Sbjct: 326 IKLTELGPRLTLKLVKIEEGI 346 >3LX7-A nrPDB Length = 174 Score = 27.3 bits (59), Expect = 7.4, Method: Compositional matrix adjust. Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 12/89 (13%) Query: 8 NITNKLKRQEIFADIKHEKNKERHTMRRKRA---KEERENPELREQRL--KENVTQTI-- 60 + TNK + +I E+ KERHT+ R+R + + NPE + L KE + + Sbjct: 66 HATNKYEVDDI-----DEEGKERHTLSRRRVIPLPQWKANPETDPEALFQKEQLVLALYP 120 Query: 61 ENTRVYDETINKEVEGDEDDLMRYFNSNS 89 + T Y I+ + +DD F S Sbjct: 121 QTTCFYRALIHAPPQRPQDDYSVLFEDTS 149 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6C0F-I nrPDB 463 e-131 5WLC-SM nrPDB 339 8e-94 Sequences not found previously or not previously below threshold: 2CXH-A nrPDB 50 2e-06 6C0F-v nrPDB 34 0.070 4DG5-A nrPDB 31 0.55 1VFF-A nrPDB 30 1.1 5LZ5-A nrPDB 29 2.3 6EM4-A nrPDB 29 2.6 5OQL-d nrPDB 28 3.2 3UWQ-A nrPDB 28 6.3 1R5O-A nrPDB 27 8.3 1YCN-A nrPDB 27 8.3 6GAW-Bv nrPDB 27 9.2 >6C0F-I nrPDB Length = 295 Score = 463 bits (1192), Expect = e-131, Method: Composition-based stats. Identities = 295/295 (100%), Positives = 295/295 (100%) Query: 1 MALGNEINITNKLKRQEIFADIKHEKNKERHTMRRKRAKEERENPELREQRLKENVTQTI 60 MALGNEINITNKLKRQEIFADIKHEKNKERHTMRRKRAKEERENPELREQRLKENVTQTI Sbjct: 1 MALGNEINITNKLKRQEIFADIKHEKNKERHTMRRKRAKEERENPELREQRLKENVTQTI 60 Query: 61 ENTRVYDETINKEVEGDEDDLMRYFNSNSNEPPKIFLTTNVNAKKSAYEFANILIEILPN 120 ENTRVYDETINKEVEGDEDDLMRYFNSNSNEPPKIFLTTNVNAKKSAYEFANILIEILPN Sbjct: 61 ENTRVYDETINKEVEGDEDDLMRYFNSNSNEPPKIFLTTNVNAKKSAYEFANILIEILPN 120 Query: 121 VTFVKRKFGYKLKEISDICIKRNFTDIVIINEDKKKVTGLTFIHLPEGPTFYFKLSSFVE 180 VTFVKRKFGYKLKEISDICIKRNFTDIVIINEDKKKVTGLTFIHLPEGPTFYFKLSSFVE Sbjct: 121 VTFVKRKFGYKLKEISDICIKRNFTDIVIINEDKKKVTGLTFIHLPEGPTFYFKLSSFVE 180 Query: 181 VKKIVGHGRPTSHIPELILNNFQTRLGQTVGRLFQSILPQNPDIEGRQVITLHNQRDYIF 240 VKKIVGHGRPTSHIPELILNNFQTRLGQTVGRLFQSILPQNPDIEGRQVITLHNQRDYIF Sbjct: 181 VKKIVGHGRPTSHIPELILNNFQTRLGQTVGRLFQSILPQNPDIEGRQVITLHNQRDYIF 240 Query: 241 FRRHRYVFKDNERVGLQELGPQFTLKLKRLQRGIKEETEWEHKPEMDKEKKKFYL 295 FRRHRYVFKDNERVGLQELGPQFTLKLKRLQRGIKEETEWEHKPEMDKEKKKFYL Sbjct: 241 FRRHRYVFKDNERVGLQELGPQFTLKLKRLQRGIKEETEWEHKPEMDKEKKKFYL 295 >5WLC-SM nrPDB Length = 290 Score = 339 bits (870), Expect = 8e-94, Method: Composition-based stats. Identities = 79/293 (26%), Positives = 140/293 (47%), Gaps = 23/293 (7%) Query: 22 IKHEKNKERHTMRRKRAKEERENPELREQRLKENVTQ------------TIENTRVYDET 69 ++ + + R + RK + + + + Q +K+ + Q +++ YD++ Sbjct: 2 LRRQARERREYLYRKAQELQDSQLQQKRQIIKQALAQGKPLPKELAEDESLQKDFRYDQS 61 Query: 70 INKEVEGDE---DDLMRYFNSNSNEPPKIFLTTNVNAKKSAYEFANILIEILPNVTFVKR 126 + + E D+ DD Y ++ P+I +TT+ + +FA + + PN + R Sbjct: 62 LKESEEADDLQVDD--EYAATSGIMDPRIIVTTSRDPSTRLSQFAKEIKLLFPNAVRLNR 119 Query: 127 KFGYKLKEISDICIKRNFTDIVIINEDKKKVTGLTFIHLPEGPTFYFKLSSFVEVKKIVG 186 Y + + D C K TD+V+++E + T LT H P GPT F L + V I+ Sbjct: 120 G-NYVMPNLVDACKKSGTTDLVVLHEHRGVPTSLTISHFPHGPTAQFSLHNVVMRHDIIN 178 Query: 187 HGRPTSHIPELILNNFQTRLGQTVGRLFQSILPQNPDIEGRQVITLHNQRDYIFFRRHRY 246 G + P LI +NF T LG+ V + + + P + +VIT N+ D+I R+H Y Sbjct: 179 AGNQSEVNPHLIFDNFTTALGKRVVCILKHLFNAGPKKDSERVITFANRGDFISVRQHVY 238 Query: 247 VFKDNERVGLQELGPQFTLKLKRLQRGIKE----ETEWEHKPEMDKEKKKFYL 295 V + E V + E+GP+F ++L L+ G E + EW+ + + KK YL Sbjct: 239 V-RTREGVEIAEVGPRFEMRLFELRLGTLENKDADVEWQLRRFIRTANKKDYL 290 >2CXH-A nrPDB Length = 217 Score = 49.7 bits (117), Expect = 2e-06, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 37/94 (39%), Gaps = 2/94 (2%) Query: 88 NSNEPPKIFLTTNVNAKKSAYEFANILIEILPNVTFVKRKFGYKLKEISDICIKRNFTDI 147 + +I +TT+ F L +P R Y ++E++ I R I Sbjct: 29 SGVGGYRILVTTSRRPSPRIRSFVKDLSATIPGAFRFTRG-HYSMEELAREAIIRGADRI 87 Query: 148 VIINEDKKKVTGLTFIHLPEGPTFYFKLSSFVEV 181 V++ E + G+ ++ EGP + SF+ Sbjct: 88 VVVGERRGNP-GIIRVYAVEGPERPDNIVSFIVK 120 >6C0F-v nrPDB Length = 453 Score = 34.3 bits (77), Expect = 0.070, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 52/139 (37%), Gaps = 22/139 (15%) Query: 103 AKKSAYEFANILIEILP--NVTFVKRKFGYKLKEISDICIKRNFTDIVIINEDKKK-VTG 159 A S + +I+ +K + KLK+ +C T + + + +K Sbjct: 36 ANHSLNQLVKDFRQIMQPHTAIKLKERKSNKLKDFVVMCGPLGVTHLFMFTQSEKTGNVS 95 Query: 160 LTFIHLPEGPTFYFKLSSFVEVKKIVGH-GRPTSHI-------PELILNNFQTR------ 205 L P+GPT F++ + + I RP S P L+LN F T Sbjct: 96 LKIARTPQGPTVTFQVLDYSLGRDIKKFLKRPKSLNNDDVLNPPLLVLNGFSTSKRSGED 155 Query: 206 -----LGQTVGRLFQSILP 219 + + + +FQ+I P Sbjct: 156 DQDVNVEKVIVSMFQNIFP 174 >4DG5-A nrPDB Length = 403 Score = 31.2 bits (69), Expect = 0.55, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 15/82 (18%) Query: 22 IKHEKNKERHTMR-------RKRAKEERENPELREQRL-------KENVTQTIENTRVYD 67 +K E +K + T+R +K KE PE R ++L KE +ENTR Y+ Sbjct: 70 VKEESDKAKLTLRPVAEDLSKKLDKEVVFVPETRGEKLEAAIKDLKEGDVLLVENTR-YE 128 Query: 68 ETINKEVEGDEDDLMRYFNSNS 89 + K+ ++ +L +Y+ S Sbjct: 129 DLDGKKESKNDPELGKYWASLG 150 >1VFF-A nrPDB Length = 423 Score = 30.0 bits (66), Expect = 1.1, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 20/46 (43%) Query: 106 SAYEFANILIEILPNVTFVKRKFGYKLKEISDICIKRNFTDIVIIN 151 +AY F+ + P K +EI D+ + R T +V ++ Sbjct: 65 NAYRFSIEWSRLFPEENKFNEDAFMKYREIIDLLLTRGITPLVTLH 110 >5LZ5-A nrPDB Length = 388 Score = 29.3 bits (64), Expect = 2.3, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 4/55 (7%) Query: 196 ELILNNFQTRLGQTVGRLFQSILPQNPDIEGRQVITLHNQRDYIFFRRHRYVFKD 250 +F G+ +G +L DI+ I L N+ F ++H + KD Sbjct: 306 HQNFADFTFATGKIIG----HMLKLKGDIDSNVAIDLSNKASLAFLQKHLGLHKD 356 >6EM4-A nrPDB Length = 291 Score = 28.9 bits (63), Expect = 2.6, Method: Composition-based stats. Identities = 33/199 (16%), Positives = 69/199 (34%), Gaps = 18/199 (9%) Query: 94 KIFLTTNVNAKKSAYEFANILIEILPNVTFVKRKFGYK-LKEISDICIKRNFTDIVIINE 152 + L ++ L +LP+ + K L+++++I N +++ Sbjct: 32 RTLLISSRGVNYRHRHLIQDLSGLLPHSRKEPKLDTKKDLQQLNEIAELYNCNNVLFFEA 91 Query: 153 DKKKVTGLTFIHLPEGPTFYFKLSSFVEVKKIVGHGR-PTSHIPELILNN-FQTRLG-QT 209 K + L P GPT F + + + ++ G P L + F++ Q Sbjct: 92 RKHQDLYLWLSKPPNGPTIKFYIQNLHTMDELNFTGNCLKGSRPVLSFDQRFESSPHYQL 151 Query: 210 VGRLFQSILPQNPDIEGRQ-----VITLHNQRDYIFFRRHRYVFKDN---------ERVG 255 + L P+ + V++ D I+ R + E + Sbjct: 152 IKELLVHNFGVPPNARKSKPFIDHVMSFSIVDDKIWVRTYEISHSTKNKEEYEDGEEDIS 211 Query: 256 LQELGPQFTLKLKRLQRGI 274 L E+GP+F + + + G Sbjct: 212 LVEIGPRFVMTVILILEGS 230 >5OQL-d nrPDB Length = 446 Score = 28.5 bits (62), Expect = 3.2, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 28/41 (68%), Gaps = 1/41 (2%) Query: 12 KLKRQEIFADIKHEKNKERHTMRR-KRAKEERENPELREQR 51 ++KR+E+ A + E+N+ +H+ ++ ++ K ERE L +Q+ Sbjct: 406 EIKREELAAIKRREENERKHSNKKYEKRKSEREKAVLVKQQ 446 >3UWQ-A nrPDB Length = 255 Score = 27.7 bits (60), Expect = 6.3, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 25/65 (38%), Gaps = 6/65 (9%) Query: 84 YFNSNSNEPPKIFLTTNVNAKKSAYEFANILIEILPNVTFVKRK---FGYKLKEISDICI 140 YF SN+ PK+ + + + A F + + P+ +K F + Sbjct: 19 YFQSNAMNDPKVIVALDYDNLADALAFVDKID---PSTCRLKVGKEMFTLFGPDFVRELH 75 Query: 141 KRNFT 145 KR F+ Sbjct: 76 KRGFS 80 >1R5O-A nrPDB Length = 467 Score = 27.3 bits (59), Expect = 8.3, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 5/70 (7%) Query: 56 VTQTIENTRVYDET---INKEVEGDEDDLMRYFNSNSNEPPKIFLTTNVNAKKSAYEF-A 111 + QT+E T +YDE I+ + GD+ L R +S+ LT+ N + F A Sbjct: 309 INQTLEVTAIYDEADEEISSSICGDQVRL-RVRGDDSDVQTGYVLTSTKNPVHATTRFIA 367 Query: 112 NILIEILPNV 121 I I LP++ Sbjct: 368 QIAILELPSI 377 >1YCN-A nrPDB Length = 317 Score = 27.3 bits (59), Expect = 8.3, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 13/79 (16%) Query: 4 GNEINITNKLKRQEIFADIKHEKNKERHTMRRKRAKEERENPELREQRLKENVTQTIENT 63 G+E+N+T L +QE A + HEK K++H + + + R K + T Sbjct: 160 GDEVNMT--LAKQE--AKLVHEKIKDKHY-------NDEDVIRILSTRSKAQINATFNRY 208 Query: 64 RV--YDETINKEVEGDEDD 80 + +E + EGD+DD Sbjct: 209 QDDHGEEILKSLEEGDDDD 227 >6GAW-Bv nrPDB Length = 222 Score = 27.0 bits (58), Expect = 9.2, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 4/57 (7%) Query: 30 RHTMRRKRAKEERENPELREQRLKE---NVTQTIENTRVYDETINKEVEGDEDDLMR 83 + ++R ++ EE++ + REQ ++E + Q IEN R + ++ + D+D R Sbjct: 100 QESLRVQQLAEEQKR-QAREQLIEECMAKMPQMIENWRQQQQERREKEQADKDRRAR 155 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.314 0.134 0.358 Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,237,702 Number of Sequences: 36641 Number of extensions: 455846 Number of successful extensions: 1595 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 36 Number of HSP's that attempted gapping in prelim test: 1552 Number of HSP's gapped (non-prelim): 69 length of query: 295 length of database: 10,336,785 effective HSP length: 96 effective length of query: 199 effective length of database: 6,819,249 effective search space: 1357030551 effective search space used: 1357030551 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 59 (27.3 bits)