BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P38779 (376 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6C0F-K nrPDB 753 0.0 5WLC-SN nrPDB 41 0.001 5H05-A nrPDB 30 1.6 4V6W-Cz nrPDB 28 6.8 4RLP-A nrPDB 28 8.1 4L42-A nrPDB 28 8.6 4NZS-A nrPDB 28 8.9 >6C0F-K nrPDB Length = 376 Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust. Identities = 376/376 (100%), Positives = 376/376 (100%) Query: 1 MAKKSNSKKSTPVSTPSKEKKKVIEKKSSTAIPRERVIKAVNELIKFTSKPQDENNEEGN 60 MAKKSNSKKSTPVSTPSKEKKKVIEKKSSTAIPRERVIKAVNELIKFTSKPQDENNEEGN Sbjct: 1 MAKKSNSKKSTPVSTPSKEKKKVIEKKSSTAIPRERVIKAVNELIKFTSKPQDENNEEGN 60 Query: 61 NGKKNLLEDDEEELKKDLQLIVVNNKSFTGTSKSFKLKLLNVKHSFYKPWKEASATAVKD 120 NGKKNLLEDDEEELKKDLQLIVVNNKSFTGTSKSFKLKLLNVKHSFYKPWKEASATAVKD Sbjct: 61 NGKKNLLEDDEEELKKDLQLIVVNNKSFTGTSKSFKLKLLNVKHSFYKPWKEASATAVKD 120 Query: 121 FKVLLILKDSDIKKVSEDDLFDQLDSEGIKVDEIICGKDLKTVYKAYEARNAFISQFSLI 180 FKVLLILKDSDIKKVSEDDLFDQLDSEGIKVDEIICGKDLKTVYKAYEARNAFISQFSLI Sbjct: 121 FKVLLILKDSDIKKVSEDDLFDQLDSEGIKVDEIICGKDLKTVYKAYEARNAFISQFSLI 180 Query: 181 LADDSIVTSLPKLMGGKAYNKVETTPISIRTHANKEFSLTTLTNNIKKVYMNQLPVKLPR 240 LADDSIVTSLPKLMGGKAYNKVETTPISIRTHANKEFSLTTLTNNIKKVYMNQLPVKLPR Sbjct: 181 LADDSIVTSLPKLMGGKAYNKVETTPISIRTHANKEFSLTTLTNNIKKVYMNQLPVKLPR 240 Query: 241 GTTLNVHLGNLEWLRPEEFVDNVELISEQLIKAYQIRSIFIKTNRSPVLPLYYNQDVLDE 300 GTTLNVHLGNLEWLRPEEFVDNVELISEQLIKAYQIRSIFIKTNRSPVLPLYYNQDVLDE Sbjct: 241 GTTLNVHLGNLEWLRPEEFVDNVELISEQLIKAYQIRSIFIKTNRSPVLPLYYNQDVLDE 300 Query: 301 LEAKKDKIEETHEDDMVTIDGVQVHLSTFNKGLMEIANPSELGSIFSKQINNAKKRSSSE 360 LEAKKDKIEETHEDDMVTIDGVQVHLSTFNKGLMEIANPSELGSIFSKQINNAKKRSSSE Sbjct: 301 LEAKKDKIEETHEDDMVTIDGVQVHLSTFNKGLMEIANPSELGSIFSKQINNAKKRSSSE 360 Query: 361 LEKESSESEAVKKAKS 376 LEKESSESEAVKKAKS Sbjct: 361 LEKESSESEAVKKAKS 376 >5WLC-SN nrPDB Length = 274 Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust. Identities = 54/236 (22%), Positives = 100/236 (42%), Gaps = 33/236 (13%) Query: 76 KDLQLIVVNNKSFTGTSKSFKLKLLNVKHSFYKPWKEASATAVKDFKVLLILKDSDIKKV 135 KD+ +I+ K + + K+ +KP +D +LLI KD Sbjct: 34 KDIHIIINTGKKMGINRDNIPRIIPLTKYKLFKP---------RDLNILLITKDPS-ALY 83 Query: 136 SEDDLFDQLDSEGIKVDEIICGKDLKTVYKAYEARNAFISQFSLILADDSIVTSLPKLMG 195 E D+ SE K EII K+L+ +K + + F L++AD + LP+++G Sbjct: 84 RETLTKDEHTSELFK--EIISVKNLRRRFKGSKLTQLY-KDFDLVVADYRVHHLLPEVLG 140 Query: 196 GKAYNKVETTPISIRTHANKEFSLTTLTNNIKKVYMNQLPVKLPRGTT--------LNVH 247 + Y+ + P IR + + +Y+ + + T+ L+V Sbjct: 141 SRFYHGSKKLPYMIRMSKEVKLKRQQMVEKCDPIYVRAQLRSICKNTSYIPNNDNCLSVR 200 Query: 248 LGNLEWLRPEEFVDNVE----LISEQ-------LIKAYQIRSIFIKTNRSPVLPLY 292 +G ++ E + N++ ++++ +IK I SIF+KT+ S LP+Y Sbjct: 201 VGYIQKHSIPEILQNIQDTINFLTDKSKRPQGGVIKG-GIISIFVKTSNSTSLPIY 255 >5H05-A nrPDB Length = 640 Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust. Identities = 33/140 (23%), Positives = 58/140 (41%), Gaps = 20/140 (14%) Query: 199 YNKVETTPISIRTHANKEFSLTTLTNNIKKVYMNQLPVKLPRGTTLNVHLGNLEWLRPEE 258 Y VET + NK N+ ++Y P N+ LGN + +R + Sbjct: 253 YRVVETFAANENGIGNKGGKWLDEGMNLHRLY--------PSHAQPNLMLGNHDLVRFGD 304 Query: 259 FVDNVELISEQLIKAYQIR--SIFIKTNRSPVLPLYYNQDVLDELEAKKDKIEETHE--- 313 + + S + + ++ ++ + S + LYY +++ DELE K+E+ Sbjct: 305 LLQRGNIASPEQAEYWERHKAALSFQAAYSGPITLYYGEEIGDELEGYAQKVEQDCAVQG 364 Query: 314 --DDMVT-----IDGVQVHL 326 DD V IDG+ V+L Sbjct: 365 LCDDHVARTSANIDGLTVNL 384 >4V6W-Cz nrPDB Length = 218 Score = 28.1 bits (61), Expect = 6.8, Method: Compositional matrix adjust. Identities = 28/121 (23%), Positives = 61/121 (50%), Gaps = 15/121 (12%) Query: 177 FSLILADDSIVTSLPKLMGGKAYNKVETTPISIRTHANKEFSLTTLTNNIKKVYMNQLPV 236 + LA +S++ +P+L+ G NK P ++ +H ++ I++V + + Sbjct: 108 YDAFLASESLIKQIPRLL-GPGLNKAGKFP-ALLSHQE------SMIGKIEEVK-STIKF 158 Query: 237 KLPRGTTLNVHLGNLEWLRPEEFVDNVEL----ISEQLIKAYQ-IRSIFIKTNRSPVLPL 291 ++ + L+V +G++ ++ +E NV L + L K +Q +RS+ +K++ P L Sbjct: 159 QMKKVLCLSVAVGHV-GMKSDELAQNVNLSINFLVSLLKKNWQNVRSLHVKSSMGPPQRL 217 Query: 292 Y 292 Y Sbjct: 218 Y 218 >4RLP-A nrPDB Length = 288 Score = 27.7 bits (60), Expect = 8.1, Method: Compositional matrix adjust. Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 8/76 (10%) Query: 81 IVVNNKSFTGTSKSFKLKLLNVKHSFYKPWKEASATAVKDFKVLLILKDSDIKKVSEDDL 140 ++V N T +K+ + L VKH F A T K + +L + +S +L Sbjct: 45 MIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLIL--------EYLSGGEL 96 Query: 141 FDQLDSEGIKVDEIIC 156 F QL+ EGI +++ C Sbjct: 97 FMQLEREGIFMEDTAC 112 >4L42-A nrPDB Length = 346 Score = 27.7 bits (60), Expect = 8.6, Method: Compositional matrix adjust. Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 8/76 (10%) Query: 81 IVVNNKSFTGTSKSFKLKLLNVKHSFYKPWKEASATAVKDFKVLLILKDSDIKKVSEDDL 140 ++V N T +K+ + L VKH F A T K + +L + +S +L Sbjct: 58 MIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLIL--------EYLSGGEL 109 Query: 141 FDQLDSEGIKVDEIIC 156 F QL+ EGI +++ C Sbjct: 110 FMQLEREGIFMEDTAC 125 >4NZS-A nrPDB Length = 399 Score = 27.7 bits (60), Expect = 8.9, Method: Compositional matrix adjust. Identities = 11/35 (31%), Positives = 23/35 (65%), Gaps = 1/35 (2%) Query: 315 DMVTIDGVQVHLSTFNKGLMEIANPSELGSIFSKQ 349 ++V + GV+ + TF L ++A P+ELG++ ++ Sbjct: 9 EVVVVSGVRTAIGTFGGSLKDVA-PAELGALVVRE 42 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6C0F-K nrPDB 582 e-167 5WLC-SN nrPDB 271 5e-73 Sequences not found previously or not previously below threshold: 2W6D-A nrPDB 32 0.39 4V6W-Cz nrPDB 30 1.1 2W4O-A nrPDB 30 1.8 5IT7-qq nrPDB 29 2.5 4V8M-BJ nrPDB 29 3.6 1NYR-A nrPDB 29 3.6 1ZMR-A nrPDB 29 4.6 6HCF-u3 nrPDB 28 8.1 4NZS-A nrPDB 27 9.4 CONVERGED! >6C0F-K nrPDB Length = 376 Score = 582 bits (1501), Expect = e-167, Method: Composition-based stats. Identities = 376/376 (100%), Positives = 376/376 (100%) Query: 1 MAKKSNSKKSTPVSTPSKEKKKVIEKKSSTAIPRERVIKAVNELIKFTSKPQDENNEEGN 60 MAKKSNSKKSTPVSTPSKEKKKVIEKKSSTAIPRERVIKAVNELIKFTSKPQDENNEEGN Sbjct: 1 MAKKSNSKKSTPVSTPSKEKKKVIEKKSSTAIPRERVIKAVNELIKFTSKPQDENNEEGN 60 Query: 61 NGKKNLLEDDEEELKKDLQLIVVNNKSFTGTSKSFKLKLLNVKHSFYKPWKEASATAVKD 120 NGKKNLLEDDEEELKKDLQLIVVNNKSFTGTSKSFKLKLLNVKHSFYKPWKEASATAVKD Sbjct: 61 NGKKNLLEDDEEELKKDLQLIVVNNKSFTGTSKSFKLKLLNVKHSFYKPWKEASATAVKD 120 Query: 121 FKVLLILKDSDIKKVSEDDLFDQLDSEGIKVDEIICGKDLKTVYKAYEARNAFISQFSLI 180 FKVLLILKDSDIKKVSEDDLFDQLDSEGIKVDEIICGKDLKTVYKAYEARNAFISQFSLI Sbjct: 121 FKVLLILKDSDIKKVSEDDLFDQLDSEGIKVDEIICGKDLKTVYKAYEARNAFISQFSLI 180 Query: 181 LADDSIVTSLPKLMGGKAYNKVETTPISIRTHANKEFSLTTLTNNIKKVYMNQLPVKLPR 240 LADDSIVTSLPKLMGGKAYNKVETTPISIRTHANKEFSLTTLTNNIKKVYMNQLPVKLPR Sbjct: 181 LADDSIVTSLPKLMGGKAYNKVETTPISIRTHANKEFSLTTLTNNIKKVYMNQLPVKLPR 240 Query: 241 GTTLNVHLGNLEWLRPEEFVDNVELISEQLIKAYQIRSIFIKTNRSPVLPLYYNQDVLDE 300 GTTLNVHLGNLEWLRPEEFVDNVELISEQLIKAYQIRSIFIKTNRSPVLPLYYNQDVLDE Sbjct: 241 GTTLNVHLGNLEWLRPEEFVDNVELISEQLIKAYQIRSIFIKTNRSPVLPLYYNQDVLDE 300 Query: 301 LEAKKDKIEETHEDDMVTIDGVQVHLSTFNKGLMEIANPSELGSIFSKQINNAKKRSSSE 360 LEAKKDKIEETHEDDMVTIDGVQVHLSTFNKGLMEIANPSELGSIFSKQINNAKKRSSSE Sbjct: 301 LEAKKDKIEETHEDDMVTIDGVQVHLSTFNKGLMEIANPSELGSIFSKQINNAKKRSSSE 360 Query: 361 LEKESSESEAVKKAKS 376 LEKESSESEAVKKAKS Sbjct: 361 LEKESSESEAVKKAKS 376 >5WLC-SN nrPDB Length = 274 Score = 271 bits (692), Expect = 5e-73, Method: Composition-based stats. Identities = 54/236 (22%), Positives = 100/236 (42%), Gaps = 33/236 (13%) Query: 76 KDLQLIVVNNKSFTGTSKSFKLKLLNVKHSFYKPWKEASATAVKDFKVLLILKDSDIKKV 135 KD+ +I+ K + + K+ +KP +D +LLI KD Sbjct: 34 KDIHIIINTGKKMGINRDNIPRIIPLTKYKLFKP---------RDLNILLITKDPS-ALY 83 Query: 136 SEDDLFDQLDSEGIKVDEIICGKDLKTVYKAYEARNAFISQFSLILADDSIVTSLPKLMG 195 E D+ SE K EII K+L+ +K + + F L++AD + LP+++G Sbjct: 84 RETLTKDEHTSELFK--EIISVKNLRRRFKGSKLTQLY-KDFDLVVADYRVHHLLPEVLG 140 Query: 196 GKAYNKVETTPISIRTHANKEFSLTTLTNNIKKVYMNQLPVKLPRGTT--------LNVH 247 + Y+ + P IR + + +Y+ + + T+ L+V Sbjct: 141 SRFYHGSKKLPYMIRMSKEVKLKRQQMVEKCDPIYVRAQLRSICKNTSYIPNNDNCLSVR 200 Query: 248 LGNLEWLRPEEFVDNVE----LISEQ-------LIKAYQIRSIFIKTNRSPVLPLY 292 +G ++ E + N++ ++++ +IK I SIF+KT+ S LP+Y Sbjct: 201 VGYIQKHSIPEILQNIQDTINFLTDKSKRPQGGVIKG-GIISIFVKTSNSTSLPIY 255 >2W6D-A nrPDB Length = 695 Score = 32.0 bits (71), Expect = 0.39, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 42/93 (45%), Gaps = 1/93 (1%) Query: 29 STAIPRERVIKAVNELIKFTSKPQDENNEEGNNGKKNLLEDDEEELKKDLQLIVVNNKSF 88 +T + RER I + + ++ ++ + E + LLE D ELKK + + Sbjct: 320 NTFLTRERAIAELRQ-VRTLARLACNHTREAVARRIPLLEQDVNELKKRIDSVEPEFNKL 378 Query: 89 TGTSKSFKLKLLNVKHSFYKPWKEASATAVKDF 121 TG F+ +++N + + + E+ + V + Sbjct: 379 TGIRDEFQKEIINTRDTQARTISESFRSYVLNL 411 >4V6W-Cz nrPDB Length = 218 Score = 30.5 bits (67), Expect = 1.1, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 53/121 (43%), Gaps = 15/121 (12%) Query: 177 FSLILADDSIVTSLPKLMGGKAYNKVETTPISIRTHANKEFSLTTLTNNIKKVYMNQLPV 236 + LA +S++ +P+L+G NK P + +H + K M ++ Sbjct: 108 YDAFLASESLIKQIPRLLGP-GLNKAGKFPALL-SHQESMIGKIEEVKSTIKFQMKKVL- 164 Query: 237 KLPRGTTLNVHLGNLEWLRPEEFVDN----VELISEQLIKAYQ-IRSIFIKTNRSPVLPL 291 L+V +G++ ++ +E N + + L K +Q +RS+ +K++ P L Sbjct: 165 ------CLSVAVGHVG-MKSDELAQNVNLSINFLVSLLKKNWQNVRSLHVKSSMGPPQRL 217 Query: 292 Y 292 Y Sbjct: 218 Y 218 >2W4O-A nrPDB Length = 349 Score = 30.1 bits (66), Expect = 1.8, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 33/90 (36%), Gaps = 2/90 (2%) Query: 97 LKLLNVKHSFYKPWKEASATAVKDFKVLLILKDSDIKKVSEDDLFDQLDSEGIKVDEIIC 156 ++LN ++ F PW + + KD LI+ D + + L Q K + Sbjct: 261 RRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQAL--QHPWVTGKAANFVH 318 Query: 157 GKDLKTVYKAYEARNAFISQFSLILADDSI 186 + + + AR + ++A + Sbjct: 319 MDTAQKKLQEFNARRKLKAAVKAVVASSRL 348 >5IT7-qq nrPDB Length = 217 Score = 29.3 bits (64), Expect = 2.5, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 63/144 (43%), Gaps = 13/144 (9%) Query: 153 EIICGKDLKTVYKAYEARNAFISQFSLILADDSIVTSLPKLMGGKAYNKVETTPISIRTH 212 + + +DLK + K + ++S +A + ++ +P+L+G + +K P + + Sbjct: 83 DAMSVEDLKKLNKNKKLIKKLAKKYSAFVASEVLIKQVPRLLGPQL-SKAGKFPTPVSHN 141 Query: 213 ANKEFSLTTLTNNIKKVYMNQLPVKLPRGTTLNVHLGNLEWLR---PEEFVDNVELISEQ 269 + L N+++ QL L L V +GN+E + + +V + Sbjct: 142 DD----LYQKVNDVRSTIKFQLKKVLC----LAVAVGNVEMDEDTLVNQILMSVNFLVSL 193 Query: 270 LIKAYQ-IRSIFIKTNRSPVLPLY 292 L K +Q + S+ IK+ P LY Sbjct: 194 LKKNWQNVGSLVIKSTMGPAYRLY 217 >4V8M-BJ nrPDB Length = 214 Score = 29.0 bits (63), Expect = 3.6, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 52/119 (43%), Gaps = 7/119 (5%) Query: 175 SQFSLILADDSIVTSLPKLMGGKAYNKVETTPISIRTHANKEFSLTTLTNNIKKVYMNQL 234 +Q+ L +SI+ ++P+L+G ++V P + + + L + +K QL Sbjct: 102 NQYDAFLCSESIIKTVPRLVGPHM-HRVGKFPTVCAQNESLPDKVLELQSTVK----FQL 156 Query: 235 PVKLPRGTTLNVHLGNLEWLRPEEFVDNVELISEQLIKAYQ-IRSIFIKTNRSPVLPLY 292 L GT + H+ E + V + + L K +Q ++S +IK+ +Y Sbjct: 157 KKVLCLGTCVG-HVDMTEDQVRQNVVMAINFLVSLLKKNWQNLKSAYIKSTMGKSQRIY 214 >1NYR-A nrPDB Length = 645 Score = 29.0 bits (63), Expect = 3.6, Method: Composition-based stats. Identities = 47/255 (18%), Positives = 90/255 (35%), Gaps = 41/255 (16%) Query: 1 MAKKSNSKKSTPVSTP-SKEKKKVIEKKSSTAIPRERVIKAVNELIKFTSKPQDENNEEG 59 + K + S + TP S+E +V+ + STA IK + +KF P E Sbjct: 49 LTKPLETDGSIEIVTPGSEEALEVL--RHSTAHLMAHAIKRLYGNVKFGVGPVIEGGFYY 106 Query: 60 N-NGKKNLLEDDEEELKKDLQLIVVNNKSF---TGTSKSFKLKLLNVKHSFYKPWKEASA 115 + + +N+ DD E+++K ++ IV N + K N ++ Sbjct: 107 DFDIDQNISSDDFEQIEKTMKQIVNENMKIERKVVSRDEAKELFSNDEYKLEL------- 159 Query: 116 TAVKDFKVLLILKDSDIKKVSEDDLFDQLDSEGIKVDEIICGKDLKTVYKAYEARNAFIS 175 + I +D ++ S+ D D G+ V K+ +K A+ Sbjct: 160 -------IDAIPEDENVTLYSQGDFTD--LCRGVHVPSTAKIKE----FKLLSTAGAYWR 206 Query: 176 QFSLILADDSIVTSLPKLMGGKAYNKVETTPISIRTHANKEFSLTTLTNNIKKVYMNQLP 235 DS L ++ G ++K + ++ ++ +++ N Sbjct: 207 -------GDSNNKMLQRIYGTAFFDK-KELKAHLQMLEERKERDHRKIGKELELFTNSQL 258 Query: 236 VK------LPRGTTL 244 V LP G T+ Sbjct: 259 VGAGLPLWLPNGATI 273 >1ZMR-A nrPDB Length = 387 Score = 28.6 bits (62), Expect = 4.6, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 21/42 (50%) Query: 259 FVDNVELISEQLIKAYQIRSIFIKTNRSPVLPLYYNQDVLDE 300 +D++ I++QLI I + FI V Y D++DE Sbjct: 200 VLDSLSKIADQLIVGGGIANTFIAAQGHDVGKSLYEADLVDE 241 >6HCF-u3 nrPDB Length = 217 Score = 27.8 bits (60), Expect = 8.1, Method: Composition-based stats. Identities = 27/121 (22%), Positives = 53/121 (43%), Gaps = 15/121 (12%) Query: 177 FSLILADDSIVTSLPKLMGGKAYNKVETTPISIRTHANKEFSLTTLTNNIKKVYMNQLPV 236 + LA +S++ +P+++G NK P S+ TH + + K M ++ Sbjct: 107 YDAFLASESLIKQIPRILGP-GLNKAGKFP-SLLTHNENMVAKVDEVKSTIKFQMKKVL- 163 Query: 237 KLPRGTTLNVHLGNLEWLRPEEFVDNVE----LISEQLIKAYQ-IRSIFIKTNRSPVLPL 291 L V +G++ + +E V N+ + L K +Q +R+++IK+ L Sbjct: 164 ------CLAVAVGHV-KMTDDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRL 216 Query: 292 Y 292 Y Sbjct: 217 Y 217 >4NZS-A nrPDB Length = 399 Score = 27.4 bits (59), Expect = 9.4, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 23/35 (65%), Gaps = 1/35 (2%) Query: 315 DMVTIDGVQVHLSTFNKGLMEIANPSELGSIFSKQ 349 ++V + GV+ + TF L ++A P+ELG++ ++ Sbjct: 9 EVVVVSGVRTAIGTFGGSLKDVA-PAELGALVVRE 42 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.310 0.127 0.319 Lambda K H 0.267 0.0394 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 12,814,852 Number of Sequences: 36641 Number of extensions: 502140 Number of successful extensions: 1416 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 35 Number of HSP's that attempted gapping in prelim test: 1390 Number of HSP's gapped (non-prelim): 53 length of query: 376 length of database: 10,336,785 effective HSP length: 99 effective length of query: 277 effective length of database: 6,709,326 effective search space: 1858483302 effective search space used: 1858483302 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits) S2: 60 (27.8 bits)