BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P38698 (397 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 2QB6-A nrPDB 813 0.0 2EB0-A nrPDB 49 4e-06 2ENX-A nrPDB 36 0.030 2WMN-A nrPDB 30 2.0 >2QB6-A nrPDB Length = 397 Score = 813 bits (2100), Expect = 0.0, Method: Compositional matrix adjust. Identities = 397/397 (100%), Positives = 397/397 (100%) Query: 1 MSPLRKTVPEFLAHLKSLPISKIASNDVLTICVGNESADMDSIASAITYSYCQYIYNEGT 60 MSPLRKTVPEFLAHLKSLPISKIASNDVLTICVGNESADMDSIASAITYSYCQYIYNEGT Sbjct: 1 MSPLRKTVPEFLAHLKSLPISKIASNDVLTICVGNESADMDSIASAITYSYCQYIYNEGT 60 Query: 61 YSEEKKKGSFIVPIIDIPREDLSLRRDVMYVLEKLKIKEEELFFIEDLKSLKQNVSQGTE 120 YSEEKKKGSFIVPIIDIPREDLSLRRDVMYVLEKLKIKEEELFFIEDLKSLKQNVSQGTE Sbjct: 61 YSEEKKKGSFIVPIIDIPREDLSLRRDVMYVLEKLKIKEEELFFIEDLKSLKQNVSQGTE 120 Query: 121 LNSYLVDNNDTPKNLKNYIDNVVGIIDHHFDLQKHLDAEPRIVKVSGSCSSLVFNYWYEK 180 LNSYLVDNNDTPKNLKNYIDNVVGIIDHHFDLQKHLDAEPRIVKVSGSCSSLVFNYWYEK Sbjct: 121 LNSYLVDNNDTPKNLKNYIDNVVGIIDHHFDLQKHLDAEPRIVKVSGSCSSLVFNYWYEK 180 Query: 181 LQGDREVVMNIAPLLMGAILIDTSNMRRKVEESDKLAIERCQAVLSGAVNEVSAQGLEDS 240 LQGDREVVMNIAPLLMGAILIDTSNMRRKVEESDKLAIERCQAVLSGAVNEVSAQGLEDS Sbjct: 181 LQGDREVVMNIAPLLMGAILIDTSNMRRKVEESDKLAIERCQAVLSGAVNEVSAQGLEDS 240 Query: 241 SEFYKEIKSRKNDIKGFSVSDILKKDYKQFNFQGKGHKGLEIGLSSIVKRMSWLFNEHGG 300 SEFYKEIKSRKNDIKGFSVSDILKKDYKQFNFQGKGHKGLEIGLSSIVKRMSWLFNEHGG Sbjct: 241 SEFYKEIKSRKNDIKGFSVSDILKKDYKQFNFQGKGHKGLEIGLSSIVKRMSWLFNEHGG 300 Query: 301 EADFVNQCRRFQAERGLDVLVLLTSWRKAGDSHRELVILGDSNVVRELIERVSDKLQLQL 360 EADFVNQCRRFQAERGLDVLVLLTSWRKAGDSHRELVILGDSNVVRELIERVSDKLQLQL Sbjct: 301 EADFVNQCRRFQAERGLDVLVLLTSWRKAGDSHRELVILGDSNVVRELIERVSDKLQLQL 360 Query: 361 FGGNLDGGVAMFKQLNVEATRKQVVPYLEEAYSNLEE 397 FGGNLDGGVAMFKQLNVEATRKQVVPYLEEAYSNLEE Sbjct: 361 FGGNLDGGVAMFKQLNVEATRKQVVPYLEEAYSNLEE 397 >2EB0-A nrPDB Length = 307 Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 86/374 (22%), Positives = 155/374 (41%), Gaps = 81/374 (21%) Query: 32 CVGNESADMDSIASAITYSYCQYIYNEGTYSEEKKKGSFIVPIIDIPREDLSLRRDVMYV 91 VG+++ D DSIASAI +Y Y P + + +V Sbjct: 4 VVGHKNPDTDSIASAIVLAYFLDCY---------------------PARLGDINPETEFV 42 Query: 92 LEKLKIKEEELFFIEDLKSLKQNVSQGTELNSYLVDNNDTPKNLKNYIDN-VVGIIDHHF 150 L K + E EL ++G E+ LVD+++ ++ + + ++ IIDHH Sbjct: 43 LRKFGVMEPELI----------ESAKGKEI--ILVDHSEKSQSFDDLEEGKLIAIIDHH- 89 Query: 151 DLQKHLDAEPRI--VKVSGSCSSLVFNYWYEK---LQG--DREVVMNIAPLLMGAILIDT 203 EP + K GS ++++ +++ L G +E+ ++A LL+ AI+ DT Sbjct: 90 -KVGLTTTEPILYYAKPVGSTATVIAELYFKDAIDLIGGKKKELKPDLAGLLLSAIISDT 148 Query: 204 SNMRRKVEES-DKLAIERCQAVLSGAVNEVSAQGLEDSSEFYKEIKSRKNDIKGFSVSDI 262 + DK ++ + G+ + EF EI K+ + +I Sbjct: 149 VLFKSPTTTDLDKEMAKKLAEI----------AGISNIEEFGMEILKAKSVVGKLKPEEI 198 Query: 263 LKKDYKQFNFQGKGHKGLEIGLSSI-VKRMSWLFNEHGGEADFVNQCRRFQAERGLDVLV 321 + D+K F+F GK ++G+ + V +S + + D G D++V Sbjct: 199 INMDFKNFDFNGK-----KVGIGQVEVIDVSEV---ESKKEDIYKLLEEKLKNEGYDLIV 250 Query: 322 -LLTSWRKAGDSHRELVILGDSNVVRELIERVSDKLQLQLFGGNLDGGVAMFKQLNVEAT 380 L+T K G E +++G+ +E+ E+ F ++G + V + Sbjct: 251 FLITDIMKEG---SEALVVGN----KEMFEKA--------FNVKVEGNSVFLE--GVMSR 293 Query: 381 RKQVVPYLEEAYSN 394 +KQVVP LE AY+ Sbjct: 294 KKQVVPPLERAYNG 307 >2ENX-A nrPDB Length = 310 Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust. Identities = 53/249 (21%), Positives = 110/249 (44%), Gaps = 41/249 (16%) Query: 31 ICVGNESADMDSIASAITYSYCQYIYNEGTYSEEKKKGSFIVPIIDIPREDLSLRRDVMY 90 + G+++ D D+I S++ ++Y G +E G+ P E+ + Y Sbjct: 4 LVFGHQNPDSDAIGSSVAFAYLAK-EAWGLDTEAVALGT--------PNEETA------Y 48 Query: 91 VLEKLKIKEEELFFIEDLKSLKQNVSQGTELNSYLVDNNDTPKNLKNYID-NVVGIIDHH 149 VL + F ++ + ++ ++G E L D+N+ +++ + D V G++DHH Sbjct: 49 VL--------DYFGVQAPRVVESAKAEGVE-TVILTDHNEFQQSISDIKDVTVYGVVDHH 99 Query: 150 FDLQKHLDAEPRIVKVS--GSCSSLVFNYWYEKLQGDREVVMNIAPLLMGAILIDTSNMR 207 + A P +++ GS SS+V+ + E V +A LL+ ++ DT ++ Sbjct: 100 -RVANFETANPLYMRLEPVGSASSIVYRMFKEN---GVSVPKELAGLLLSGLISDTLLLK 155 Query: 208 RKVEESDKLAIERCQAVLSGAVNEVSAQGLEDSSEFYKEIKSRKNDIKGFSVSDILKKDY 267 + + + + A L+G VN LE E+ E+ ++ + ++++ D Sbjct: 156 SPTTHASDIPVAKELAELAG-VN------LE---EYGLEMLKAGTNLSSKTAAELIDIDA 205 Query: 268 KQFNFQGKG 276 K F G+ Sbjct: 206 KTFELNGEA 214 >2WMN-A nrPDB Length = 428 Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 11/77 (14%) Query: 180 KLQGDREVVMNIAPLLMGAILIDTSNMRRKVEESDKLA-------IERCQAVLSGAVNEV 232 KLQG V +N PL +D +N +R + KL +E C L AVNE Sbjct: 338 KLQGSVSVQVNAGPLAYARAFLDDTNTKRYPDNKVKLLKEVFRQFVEACGQAL--AVNER 395 Query: 233 SAQGLEDSSEFYKEIKS 249 + ED E+ +E+K+ Sbjct: 396 LIK--EDQLEYQEEMKA 410 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 2QB6-A nrPDB 638 0.0 2EB0-A nrPDB 335 2e-92 Sequences not found previously or not previously below threshold: 1K23-A nrPDB 135 4e-32 4RPA-A nrPDB 131 5e-31 2ENX-A nrPDB 126 1e-29 1K20-A nrPDB 126 2e-29 1I74-A nrPDB 122 3e-28 3RRW-A nrPDB 32 0.53 4V94-A nrPDB 29 3.1 >2QB6-A nrPDB Length = 397 Score = 638 bits (1646), Expect = 0.0, Method: Composition-based stats. Identities = 397/397 (100%), Positives = 397/397 (100%) Query: 1 MSPLRKTVPEFLAHLKSLPISKIASNDVLTICVGNESADMDSIASAITYSYCQYIYNEGT 60 MSPLRKTVPEFLAHLKSLPISKIASNDVLTICVGNESADMDSIASAITYSYCQYIYNEGT Sbjct: 1 MSPLRKTVPEFLAHLKSLPISKIASNDVLTICVGNESADMDSIASAITYSYCQYIYNEGT 60 Query: 61 YSEEKKKGSFIVPIIDIPREDLSLRRDVMYVLEKLKIKEEELFFIEDLKSLKQNVSQGTE 120 YSEEKKKGSFIVPIIDIPREDLSLRRDVMYVLEKLKIKEEELFFIEDLKSLKQNVSQGTE Sbjct: 61 YSEEKKKGSFIVPIIDIPREDLSLRRDVMYVLEKLKIKEEELFFIEDLKSLKQNVSQGTE 120 Query: 121 LNSYLVDNNDTPKNLKNYIDNVVGIIDHHFDLQKHLDAEPRIVKVSGSCSSLVFNYWYEK 180 LNSYLVDNNDTPKNLKNYIDNVVGIIDHHFDLQKHLDAEPRIVKVSGSCSSLVFNYWYEK Sbjct: 121 LNSYLVDNNDTPKNLKNYIDNVVGIIDHHFDLQKHLDAEPRIVKVSGSCSSLVFNYWYEK 180 Query: 181 LQGDREVVMNIAPLLMGAILIDTSNMRRKVEESDKLAIERCQAVLSGAVNEVSAQGLEDS 240 LQGDREVVMNIAPLLMGAILIDTSNMRRKVEESDKLAIERCQAVLSGAVNEVSAQGLEDS Sbjct: 181 LQGDREVVMNIAPLLMGAILIDTSNMRRKVEESDKLAIERCQAVLSGAVNEVSAQGLEDS 240 Query: 241 SEFYKEIKSRKNDIKGFSVSDILKKDYKQFNFQGKGHKGLEIGLSSIVKRMSWLFNEHGG 300 SEFYKEIKSRKNDIKGFSVSDILKKDYKQFNFQGKGHKGLEIGLSSIVKRMSWLFNEHGG Sbjct: 241 SEFYKEIKSRKNDIKGFSVSDILKKDYKQFNFQGKGHKGLEIGLSSIVKRMSWLFNEHGG 300 Query: 301 EADFVNQCRRFQAERGLDVLVLLTSWRKAGDSHRELVILGDSNVVRELIERVSDKLQLQL 360 EADFVNQCRRFQAERGLDVLVLLTSWRKAGDSHRELVILGDSNVVRELIERVSDKLQLQL Sbjct: 301 EADFVNQCRRFQAERGLDVLVLLTSWRKAGDSHRELVILGDSNVVRELIERVSDKLQLQL 360 Query: 361 FGGNLDGGVAMFKQLNVEATRKQVVPYLEEAYSNLEE 397 FGGNLDGGVAMFKQLNVEATRKQVVPYLEEAYSNLEE Sbjct: 361 FGGNLDGGVAMFKQLNVEATRKQVVPYLEEAYSNLEE 397 >2EB0-A nrPDB Length = 307 Score = 335 bits (859), Expect = 2e-92, Method: Composition-based stats. Identities = 86/374 (22%), Positives = 155/374 (41%), Gaps = 81/374 (21%) Query: 32 CVGNESADMDSIASAITYSYCQYIYNEGTYSEEKKKGSFIVPIIDIPREDLSLRRDVMYV 91 VG+++ D DSIASAI +Y Y P + + +V Sbjct: 4 VVGHKNPDTDSIASAIVLAYFLDCY---------------------PARLGDINPETEFV 42 Query: 92 LEKLKIKEEELFFIEDLKSLKQNVSQGTELNSYLVDNNDTPKNLKNYIDN-VVGIIDHHF 150 L K + E EL ++G E+ LVD+++ ++ + + ++ IIDHH Sbjct: 43 LRKFGVMEPELI----------ESAKGKEI--ILVDHSEKSQSFDDLEEGKLIAIIDHH- 89 Query: 151 DLQKHLDAEPRI--VKVSGSCSSLVFNYWYEK---LQG--DREVVMNIAPLLMGAILIDT 203 EP + K GS ++++ +++ L G +E+ ++A LL+ AI+ DT Sbjct: 90 -KVGLTTTEPILYYAKPVGSTATVIAELYFKDAIDLIGGKKKELKPDLAGLLLSAIISDT 148 Query: 204 SNMRRKVEES-DKLAIERCQAVLSGAVNEVSAQGLEDSSEFYKEIKSRKNDIKGFSVSDI 262 + DK ++ + G+ + EF EI K+ + +I Sbjct: 149 VLFKSPTTTDLDKEMAKKLAEI----------AGISNIEEFGMEILKAKSVVGKLKPEEI 198 Query: 263 LKKDYKQFNFQGKGHKGLEIGLSSI-VKRMSWLFNEHGGEADFVNQCRRFQAERGLDVLV 321 + D+K F+F GK ++G+ + V +S + + D G D++V Sbjct: 199 INMDFKNFDFNGK-----KVGIGQVEVIDVSEV---ESKKEDIYKLLEEKLKNEGYDLIV 250 Query: 322 -LLTSWRKAGDSHRELVILGDSNVVRELIERVSDKLQLQLFGGNLDGGVAMFKQLNVEAT 380 L+T K G E +++G+ +E+ E+ F ++G + V + Sbjct: 251 FLITDIMKEG---SEALVVGN----KEMFEKA--------FNVKVEGNSVFLE--GVMSR 293 Query: 381 RKQVVPYLEEAYSN 394 +KQVVP LE AY+ Sbjct: 294 KKQVVPPLERAYNG 307 >1K23-A nrPDB Length = 309 Score = 135 bits (339), Expect = 4e-32, Method: Composition-based stats. Identities = 69/365 (18%), Positives = 144/365 (39%), Gaps = 67/365 (18%) Query: 31 ICVGNESADMDSIASAITYSYCQYIYNEGTYSEEKKKGSFIVPIIDIPREDLSLRRDVMY 90 + G+++ D D+I SAI Y+ + N+ ++ E P + + Y Sbjct: 5 LIFGHQNPDTDTICSAIAYA---DLKNKLGFNAE-------------PVRLGQVNGETQY 48 Query: 91 VLEKLKIKEEELFFIEDLKSLKQNVSQGTELNSYLVDNNDTPKNLKNYID-NVVGIIDHH 149 L+ K + L + LVD+N+ +++K+ + V+ +IDHH Sbjct: 49 ALDYFKQESPRLV----------ETAANEVNGVILVDHNERQQSIKDIEEVQVLEVIDHH 98 Query: 150 FDLQKHLDAEPRI--VKVSGSCSSLVFNYWYEKLQGDREVVMNIAPLLMGAILIDTSNMR 207 + AEP + G ++++ + E + ++ IA L++ AI+ D+ + Sbjct: 99 -RIANFETAEPLYYRAEPVGCTATILNKMYKEN---NVKIEKEIAGLMLSAIISDSLLFK 154 Query: 208 RKVEES-DKLAIERCQAVLSGAVNEVSAQGLEDSSEFYKEIKSRKNDIKGFSVSDILKKD 266 D A + + G+ D+ E+ + D+ +V +++ D Sbjct: 155 SPTCTDQDVAAAKELAEI----------AGV-DAEEYGLNMLKAGADLSKKTVEELISLD 203 Query: 267 YKQFNFQGKGHKGLEIGLSSIVKRMSWLFNEHGGEADFVNQCRRFQAERGLDVLVLLTSW 326 K+F K ++ ++ + + + +A+ + AE+ LD+ +L+ + Sbjct: 204 AKEFTLGSK-----KVEIAQV--NTVDIEDVKKRQAELEAVISKVVAEKNLDLFLLVITD 256 Query: 327 RKAGDSHRELVILGDSNVVRELIERVSDKLQLQLFGGNLDGGVAMFKQLNVEATRKQVVP 386 DS + +G+ E + F L+ A+ K V + +KQVVP Sbjct: 257 ILENDSL--ALAIGNEAAKVE-----------KAFNVTLENNTALLK--GVVSRKKQVVP 301 Query: 387 YLEEA 391 L +A Sbjct: 302 VLTDA 306 >4RPA-A nrPDB Length = 317 Score = 131 bits (330), Expect = 5e-31, Method: Composition-based stats. Identities = 62/372 (16%), Positives = 131/372 (35%), Gaps = 69/372 (18%) Query: 30 TICVGNESADMDSIASAITYSYCQYIYNEGTYSEEKKKGSFIVPIIDIPREDLSLRRDVM 89 T G+++ D D+I+SAI + + + + + Sbjct: 4 TYIFGHKNPDTDAISSAIIMAEFEQLRGNSGAKAY---------------RLGDVSAETQ 48 Query: 90 YVLEKLKIKEEELFFIEDLKSLKQNVSQGTELNSYLVDNNDTPKNLKNYIDNVVG-IIDH 148 + L+ + EL + G ++ LVD+N+ ++ + +IDH Sbjct: 49 FALDTFNVPAPELL---------TDDLDGQDV--ILVDHNEFQQSSDTIASATIKHVIDH 97 Query: 149 HFDLQKHLDAEPRI--VKVSGSCSSLVFNYWYEKLQGDREVVMNIAPLLMGAILIDTSNM 206 H + A P + G +++++ + E+ E+ IA L++ AI+ D+ Sbjct: 98 H-RIANFETAGPLCYRAEPVGCTATILYKMFRER---GFEIKPEIAGLMLSAIISDSLLF 153 Query: 207 RRKV-EESDKLAIERCQAVLSGAVNEVSAQGLEDSSEFYKEIKSRKNDIKGFSVSDILKK 265 + + D A E + + D ++ ++ SV +L Sbjct: 154 KSPTCTQQDVKAAEELKDIAKV-----------DIQKYGLDMLKAGASTTDKSVEFLLNM 202 Query: 266 DYKQFNFQGKGHKGLEIGLSSIVKRMSWLFNEHGGEADFVNQCRRFQAERGLDVLVL-LT 324 D K F + ++ + + N + D + A+ D+ VL +T Sbjct: 203 DAKSFTMGDYVTRIAQVN----AVDLDEVLN---RKEDLEKEMLAVSAQEKYDLFVLVVT 255 Query: 325 SWRKAGDSHRELVILGDSNVVRELIERVSDKLQLQLFGGNLDGGVAMFKQLNVEATRKQV 384 +S +++++G + F L+ +A V + +KQ+ Sbjct: 256 DII---NSDSKILVVG-----------AEKDKVGEAFNVQLEDDMAFLS--GVVSRKKQI 299 Query: 385 VPYLEEAYSNLE 396 VP + EA + LE Sbjct: 300 VPQITEALTKLE 311 >2ENX-A nrPDB Length = 310 Score = 126 bits (317), Expect = 1e-29, Method: Composition-based stats. Identities = 62/368 (16%), Positives = 138/368 (37%), Gaps = 67/368 (18%) Query: 31 ICVGNESADMDSIASAITYSYCQYIYNEGTYSEEKKKGSFIVPIIDIPREDLSLRRDVMY 90 + G+++ D D+I S++ ++Y + + + Y Sbjct: 4 LVFGHQNPDSDAIGSSVAFAYL---------------AKEAWGLDTEAVALGTPNEETAY 48 Query: 91 VLEKLKIKEEELFFIEDLKSLKQNVSQGTELNSYLVDNNDTPKNLKNYID-NVVGIIDHH 149 VL+ ++ + + ++G E L D+N+ +++ + D V G++DHH Sbjct: 49 VLDYFGVQAPRVV--------ESAKAEGVE-TVILTDHNEFQQSISDIKDVTVYGVVDHH 99 Query: 150 FDLQKHLDAEPRIVK--VSGSCSSLVFNYWYEKLQGDREVVMNIAPLLMGAILIDTSNMR 207 + A P ++ GS SS+V+ + E V +A LL+ ++ DT ++ Sbjct: 100 -RVANFETANPLYMRLEPVGSASSIVYRMFKENGV---SVPKELAGLLLSGLISDTLLLK 155 Query: 208 RKVE-ESDKLAIERCQAVLSGAVNEVSAQGLEDSSEFYKEIKSRKNDIKGFSVSDILKKD 266 SD + + G+ + E+ E+ ++ + ++++ D Sbjct: 156 SPTTHASDIPVAKELAEL----------AGV-NLEEYGLEMLKAGTNLSSKTAAELIDID 204 Query: 267 YKQFNFQGKGHKGLEIGLSSIVKRMSWLFNEHGGEADFVNQCRRFQAERGL-DVLVLLTS 325 K F G+ + ++ ++ + + + + G D ++++T Sbjct: 205 AKTFELNGEAVRVAQVN----TVDINDIL---ARQEEIEVAIQEAIVTEGYSDFVLMITD 257 Query: 326 WRKAGDSHRELVILGDSNVVRELIERVSDKLQLQLFGGNLDGGVAMFKQLNVEATRKQVV 385 +S+ E++ LG + E F L+ A + +KQVV Sbjct: 258 IV---NSNSEILALGSNMAKVE-----------AAFEFTLENNHAFL--AGAVSRKKQVV 301 Query: 386 PYLEEAYS 393 P L E+Y+ Sbjct: 302 PQLTESYN 309 >1K20-A nrPDB Length = 310 Score = 126 bits (315), Expect = 2e-29, Method: Composition-based stats. Identities = 62/369 (16%), Positives = 137/369 (37%), Gaps = 69/369 (18%) Query: 31 ICVGNESADMDSIASAITYSYC-QYIYNEGTYSEEKKKGSFIVPIIDIPREDLSLRRDVM 89 + G+++ D D+I S+ ++Y + Y T + + Sbjct: 4 LVFGHQNPDSDAIGSSYAFAYLAREAYGLDTEAVA----------------LGEPNEETA 47 Query: 90 YVLEKLKIKEEELFFIEDLKSLKQNVSQGTELNSYLVDNNDTPKNLKNYID-NVVGIIDH 148 +VL+ + + ++G E L D+N+ +++ + + V G++DH Sbjct: 48 FVLDYFGVAAPRVITSAK--------AEGAE-QVILTDHNEFQQSVADIAEVEVYGVVDH 98 Query: 149 HFDLQKHLDAEPRIVK--VSGSCSSLVFNYWYEKLQGDREVVMNIAPLLMGAILIDTSNM 206 H + A P ++ GS SS+V+ + E V IA L++ ++ DT + Sbjct: 99 H-RVANFETANPLYMRLEPVGSASSIVYRMFKEHSVA---VSKEIAGLMLSGLISDTLLL 154 Query: 207 RRKVEE-SDKLAIERCQAVLSGAVNEVSAQGLEDSSEFYKEIKSRKNDIKGFSVSDILKK 265 + +DK + G+ + E+ + ++ S +++ Sbjct: 155 KSPTTHPTDKAIAPELAEL----------AGV-NLEEYGLAMLKAGTNLASKSAEELIDI 203 Query: 266 DYKQFNFQGKGHKGLEIGLSSIVKRMSWLFNEHGGEADFVNQCRRFQAERGL-DVLVLLT 324 D K F G + ++ ++ + +A+ + A+ G D ++++T Sbjct: 204 DAKTFELNGNNVRVAQVN----TVDIAEVLE---RQAEIEAAIEKAIADNGYSDFVLMIT 256 Query: 325 SWRKAGDSHRELVILGDSNVVRELIERVSDKLQLQLFGGNLDGGVAMFKQLNVEATRKQV 384 +S+ E++ +G + E F L+ A + +KQV Sbjct: 257 DII---NSNSEILAIGSNMDKVE-----------AAFNFVLENNHAFL--AGAVSRKKQV 300 Query: 385 VPYLEEAYS 393 VP L E+++ Sbjct: 301 VPQLTESFN 309 >1I74-A nrPDB Length = 309 Score = 122 bits (305), Expect = 3e-28, Method: Composition-based stats. Identities = 59/368 (16%), Positives = 132/368 (35%), Gaps = 66/368 (17%) Query: 31 ICVGNESADMDSIASAITYSYCQYIYNEGTYSEEKKKGSFIVPIIDIPREDLSLRRDVMY 90 + G+++ D D+I S++ Y+Y + + + + + + Sbjct: 4 LVFGHQNPDSDAIGSSMAYAYLK----------------RQLGVDAQAVALGNPNEETAF 47 Query: 91 VLEKLKIKEEELFFIEDLKSLKQNVSQGTELNSYLVDNNDTPKNLKNYIDNVVGIIDHHF 150 VL+ I+ + + KQ L D+N+ +++ + + V + H Sbjct: 48 VLDYFGIQAPPVVKSAQAEGAKQ---------VILTDHNEFQQSIADIREVEVVEVVDHH 98 Query: 151 DLQKHLDAEPRIVK--VSGSCSSLVFNYWYEKLQGDREVVMNIAPLLMGAILIDTSNMRR 208 + A P ++ GS SS+V+ + E + IA +++ ++ DT ++ Sbjct: 99 RVANFETANPLYMRLEPVGSASSIVYRLYKENGVA---IPKEIAGVMLSGLISDTLLLKS 155 Query: 209 KVE-ESDKLAIERCQAVLSGAVNEVSAQGLEDSSEFYKEIKSRKNDIKGFSVSDILKKDY 267 SD E + G+ D E+ + ++ + + ++ D Sbjct: 156 PTTHASDPAVAEDLAKI----------AGV-DLQEYGLAMLKAGTNLASKTAAQLVDIDA 204 Query: 268 KQFNFQGKGHKGLEIGLSSIVKRMSWLFNEHGGEADFVNQCRRFQAERGL-DVLVLLTSW 326 K F G + ++ ++ + + + QA G D ++++T Sbjct: 205 KTFELNGSQVRVAQVN----TVDINEVLERQNEIEEAIK---ASQAANGYSDFVLMITDI 257 Query: 327 RKAGDSHRELVILGDSNVVRELIERVSDKLQLQLFGGNLDGGVAMFKQLNVEATRKQVVP 386 +S+ E++ LG++ E F L A + +KQVVP Sbjct: 258 L---NSNSEILALGNNTDKVE-----------AAFNFTLKNNHAFL--AGAVSRKKQVVP 301 Query: 387 YLEEAYSN 394 L E+++ Sbjct: 302 QLTESFNG 309 >3RRW-A nrPDB Length = 268 Score = 31.7 bits (70), Expect = 0.53, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 30/78 (38%), Gaps = 1/78 (1%) Query: 188 VMNIAPLLMGAILIDTSNMRRKVEESDKLAIERCQAVLSGAVNEVSAQGLEDSSEFYKEI 247 + P L+ L D + + R + LS A NE + GL E KEI Sbjct: 28 KPELVPSLLKLALNDAMTYDKATKSGGANGSIRFSSELSRAENEGLSDGLSLIEEVKKEI 87 Query: 248 KSRKNDIKGFSVSDILKK 265 S + S +DI++ Sbjct: 88 DSI-SKGGPISYADIIQL 104 >4V94-A nrPDB Length = 559 Score = 29.4 bits (64), Expect = 3.1, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 43/119 (36%), Gaps = 1/119 (0%) Query: 192 APLLMGAILIDTSNMRRKVEESDKLAIERCQAVLSGAVNEVSAQGLEDSSEFYKEIKSRK 251 + A+ I N V ++LAI A L ++ +DSSE +++S Sbjct: 422 GGCVEAALNIYLDNFATTVGSREQLAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSYH 481 Query: 252 NDIKGFSVSDILKKDYKQFNFQG-KGHKGLEIGLSSIVKRMSWLFNEHGGEADFVNQCR 309 + D+ ++ Y+ + +G EI + +S + + V R Sbjct: 482 AASQMAKPEDVKRRSYRNYGLDLIRGKIVDEIHAGVLEPTISKVKSLKSALEACVAILR 540 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.312 0.123 0.302 Lambda K H 0.267 0.0375 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,171,610 Number of Sequences: 36641 Number of extensions: 489635 Number of successful extensions: 1518 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 16 Number of HSP's that attempted gapping in prelim test: 1468 Number of HSP's gapped (non-prelim): 34 length of query: 397 length of database: 10,336,785 effective HSP length: 99 effective length of query: 298 effective length of database: 6,709,326 effective search space: 1999379148 effective search space used: 1999379148 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 60 (27.8 bits)