BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P38629 (340 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1SXJ-C nrPDB 699 0.0 2CHV-A nrPDB 256 1e-68 1IQP-A nrPDB 243 1e-64 2CHG-A nrPDB 229 2e-60 1SXJ-B nrPDB 202 1e-52 1SXJ-D nrPDB 193 7e-50 1SXJ-E nrPDB 103 1e-22 3U5Z-B nrPDB 87 1e-17 1NJG-A nrPDB 76 2e-14 3GLF-B nrPDB 75 3e-14 3PVS-A nrPDB 74 9e-14 1SXJ-A nrPDB 74 1e-13 1HQC-A nrPDB 45 3e-05 5WVI-K nrPDB 43 2e-04 6EF1-K nrPDB 43 2e-04 6CHS-H nrPDB 42 4e-04 6EPD-M nrPDB 42 6e-04 5EQT-A nrPDB 41 7e-04 5C18-A nrPDB 41 7e-04 5VFP-F nrPDB 41 7e-04 5VHO-F nrPDB 40 0.001 3CF0-A nrPDB 40 0.001 6MCK-A nrPDB 40 0.002 6EF0-L nrPDB 39 0.004 5WVI-L nrPDB 39 0.004 6FVU-L nrPDB 39 0.005 1IN6-A nrPDB 38 0.006 4D81-A nrPDB 37 0.010 6QEL-G nrPDB 37 0.016 3EC2-A nrPDB 37 0.016 3WHK-A nrPDB 37 0.018 1LV7-A nrPDB 36 0.021 5VC7-A nrPDB 36 0.026 5G4G-A nrPDB 36 0.029 6HE4-H nrPDB 35 0.031 6AZ0-A nrPDB 35 0.032 4M4W-J nrPDB 35 0.032 5VQ9-D nrPDB 35 0.033 6HE9-H nrPDB 35 0.037 3H4M-A nrPDB 35 0.041 5A5B-M nrPDB 35 0.049 3PFI-A nrPDB 35 0.049 6AP1-A nrPDB 35 0.056 6BLB-A nrPDB 35 0.063 6EF0-M nrPDB 34 0.076 2R65-A nrPDB 34 0.087 4LCB-A nrPDB 33 0.12 5V8F-9 nrPDB 33 0.12 3SYK-A nrPDB 33 0.12 5UBV-A nrPDB 33 0.12 5VHP-E nrPDB 33 0.17 4LGM-A nrPDB 33 0.17 5E7P-A nrPDB 33 0.18 3EIH-A nrPDB 33 0.19 3K1J-A nrPDB 33 0.20 5XMK-A nrPDB 33 0.21 5L3S-B nrPDB 33 0.21 6MSD-E nrPDB 33 0.22 5D4W-A nrPDB 33 0.25 4ZPX-A nrPDB 33 0.26 2XSZ-A nrPDB 32 0.27 5W0T-A nrPDB 32 0.27 6QI8-A nrPDB 32 0.28 6EF3-H nrPDB 32 0.31 5VHF-B nrPDB 32 0.33 6MSK-B nrPDB 32 0.36 5BQ5-A nrPDB 32 0.37 5VFP-B nrPDB 32 0.37 6MDP-A nrPDB 32 0.40 6EM8-A nrPDB 32 0.42 5T0C-AD nrPDB 32 0.44 4XGU-A nrPDB 32 0.46 6EF0-H nrPDB 32 0.47 6NYV-B nrPDB 32 0.55 5VHN-D nrPDB 32 0.55 3PXI-A nrPDB 32 0.56 5VHO-B nrPDB 32 0.57 3TK1-A nrPDB 32 0.58 5VHO-A nrPDB 31 0.60 3HU1-A nrPDB 31 0.60 2QZ4-A nrPDB 31 0.64 5VFU-A nrPDB 31 0.65 3J3U-A nrPDB 31 0.65 6EMW-B nrPDB 31 0.71 4B3F-X nrPDB 31 0.75 6EPC-H nrPDB 31 0.78 3ZTV-A nrPDB 31 0.79 3JCO-J nrPDB 31 0.90 5VY8-A nrPDB 31 0.96 3M6A-A nrPDB 30 1.1 4YPN-A nrPDB 30 1.1 5JVF-A nrPDB 30 1.1 6CS8-A nrPDB 30 1.3 6AMN-A nrPDB 30 1.3 5GAD-l nrPDB 30 1.3 3TQO-A nrPDB 30 1.4 3NXS-A nrPDB 30 1.7 4XGC-A nrPDB 30 1.8 2CE7-A nrPDB 30 1.8 6D00-1 nrPDB 30 1.8 4YPL-A nrPDB 30 1.8 5GJQ-J nrPDB 30 1.9 2ZAO-A nrPDB 30 1.9 5M32-h nrPDB 30 1.9 5VHP-C nrPDB 29 2.2 5OFO-C nrPDB 29 2.4 4Z8X-A nrPDB 29 2.4 5Z6Q-A nrPDB 29 2.7 1J2R-A nrPDB 29 2.8 4CIU-A nrPDB 29 2.9 5A0R-A nrPDB 29 2.9 6EMW-E nrPDB 29 3.0 1XWI-A nrPDB 29 3.0 6B5C-A nrPDB 29 3.8 3J15-B nrPDB 28 4.2 2YIB-D nrPDB 28 4.3 2YIB-A nrPDB 28 4.6 6EF2-J nrPDB 28 5.2 4WRT-C nrPDB 28 5.4 2IUT-A nrPDB 28 5.6 4HSE-A nrPDB 28 5.7 4YER-A nrPDB 28 6.3 3PXG-A nrPDB 28 6.4 2IUU-A nrPDB 28 6.4 6EUX-A nrPDB 28 6.4 5WWP-B nrPDB 28 6.7 6MAT-A nrPDB 28 6.9 6E11-1 nrPDB 28 7.4 5KWA-A nrPDB 28 8.0 1QVR-A nrPDB 28 8.0 1JBK-A nrPDB 27 8.6 5HE8-A nrPDB 27 8.8 2YYZ-A nrPDB 27 9.1 3MD0-A nrPDB 27 9.6 4LPS-A nrPDB 27 9.7 >1SXJ-C nrPDB Length = 340 Score = 699 bits (1804), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/340 (99%), Positives = 340/340 (100%) Query: 1 MSTSTEKRSKENLPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKT 60 MSTSTEKRSKENLPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKT Sbjct: 1 MSTSTEKRSKENLPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKT 60 Query: 61 STIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEAD 120 STIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEAD Sbjct: 61 STIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEAD 120 Query: 121 AMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSRCTRFRFQPLPQEAIERRIAN 180 AMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLS+CTRFRFQPLPQEAIERRIAN Sbjct: 121 AMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSQCTRFRFQPLPQEAIERRIAN 180 Query: 181 VLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYECCGAPR 240 VLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYECCGAPR Sbjct: 181 VLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYECCGAPR 240 Query: 241 PSDLKAVLKSILEDDWGTAHYTLNKVRSAKGLALIDLIEGIVKILEDYELQNEETRVHLL 300 PSDLKAVLKSILEDDWGTAHYTLNKVRSAKGLALIDLIEGIVKILEDYELQNEETRVHLL Sbjct: 241 PSDLKAVLKSILEDDWGTAHYTLNKVRSAKGLALIDLIEGIVKILEDYELQNEETRVHLL 300 Query: 301 TKLADIEYSISKGGNDQIQGSAVIGAIKASFENETVKANV 340 TKLADIEYSISKGGNDQIQGSAVIGAIKASFENETVKANV Sbjct: 301 TKLADIEYSISKGGNDQIQGSAVIGAIKASFENETVKANV 340 >2CHV-A nrPDB Length = 319 Score = 256 bits (653), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 124/312 (39%), Positives = 205/312 (65%), Gaps = 8/312 (2%) Query: 15 WVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKN 74 WVEKYRP TLDEV GQ+EVI ++ +V+ +PHLLF GPPGTGKT+T +ALAR+++G+N Sbjct: 7 WVEKYRPRTLDEVVGQDEVIQRLKGYVERKNIPHLLFSGPPGTGKTATAIALARDLFGEN 66 Query: 75 YSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNAAQNALRRVI 134 + + +E+NASD+RGIDVVR++IK+FA T I FK+I LDEADA+T AQ ALRR + Sbjct: 67 WRDNFIEMNASDERGIDVVRHKIKEFARTAPIGGAPFKIIFLDEADALTADAQAALRRTM 126 Query: 135 ERYTKNTRFCVLANYAHKLTPALLSRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAE 194 E Y+K+ RF + NY ++ + SRC FRF+P+P+EA+++R+ + E +K++ + Sbjct: 127 EMYSKSCRFILSCNYVSRIIEPIQSRCAVFRFKPVPKEAMKKRLLEICEKEGVKITEDGL 186 Query: 195 KALIELSNGDMRRVLNVLQSCKATLDNPDEDEISD-DVIYECCGAPRPSDLKAVLKSILE 253 +ALI +S GD R+ +N LQ A E+ D D IY+ RP ++ ++++ L+ Sbjct: 187 EALIYISGGDFRKAINALQGAAAI------GEVVDADTIYQITATARPEEMTELIQTALK 240 Query: 254 DDWGTAHYTLNKVRSAKGLALIDLIEGIVKILEDYELQNEETRVHLLTKLADIEYSISKG 313 ++ A L+++ G++ D++ + + + +++ +V L+ KL ++++ +++G Sbjct: 241 GNFMEARELLDRLMVEYGMSGEDIVAQLFREIISMPIKD-SLKVQLIDKLGEVDFRLTEG 299 Query: 314 GNDQIQGSAVIG 325 N++IQ A + Sbjct: 300 ANERIQLDAYLA 311 >1IQP-A nrPDB Length = 327 Score = 243 bits (619), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 123/313 (39%), Positives = 199/313 (63%), Gaps = 8/313 (2%) Query: 14 PWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGK 73 PWVEKYRP+ LD++ GQ ++ ++ +V G +PHLLF GPPG GKT+ +ALARE++G+ Sbjct: 14 PWVEKYRPQRLDDIVGQEHIVKRLKHYVKTGSMPHLLFAGPPGVGKTTAALALARELFGE 73 Query: 74 NYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNAAQNALRRV 133 N+ + LELNASD+RGI+V+R ++K+FA T+ I FK+I LDEADA+T AQ ALRR Sbjct: 74 NWRHNFLELNASDERGINVIREKVKEFARTKPIGGASFKIIFLDEADALTQDAQQALRRT 133 Query: 134 IERYTKNTRFCVLANYAHKLTPALLSRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNA 193 +E ++ N RF + NY+ K+ + SRC FRF+PL E I +R+ + +E L+L+ Sbjct: 134 MEMFSSNVRFILSCNYSSKIIEPIQSRCAIFRFRPLRDEDIAKRLRYIAENEGLELTEEG 193 Query: 194 EKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYECCGAPRPSDLKAVLKSILE 253 +A++ ++ GDMRR +N+LQ+ A LD +I+D+ ++ RP D++ ++ L+ Sbjct: 194 LQAILYIAEGDMRRAINILQAA-AALDK----KITDENVFMVASRARPEDIREMMLLALK 248 Query: 254 DDWGTAHYTLNKVRSAKGLALIDLIEGIVKILEDYELQNEE-TRVHLLTKLADIEYSISK 312 ++ A L ++ +GL+ D++ + K E + L EE +V L K+ + + + + Sbjct: 249 GNFLKAREKLREILLKQGLSGEDVLVQMHK--EVFNLPIEEPKKVLLADKIGEYNFRLVE 306 Query: 313 GGNDQIQGSAVIG 325 G N+ IQ A++ Sbjct: 307 GANEIIQLEALLA 319 >2CHG-A nrPDB Length = 226 Score = 229 bits (583), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 106/213 (49%), Positives = 152/213 (71%) Query: 15 WVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKN 74 WVEKYRP TLDEV GQ+EVI ++ +V+ +PHLLF GPPGTGKT+T +ALAR+++G+N Sbjct: 7 WVEKYRPRTLDEVVGQDEVIQRLKGYVERKNIPHLLFSGPPGTGKTATAIALARDLFGEN 66 Query: 75 YSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNAAQNALRRVI 134 + + +E+NASD+RGIDVVR++IK+FA T I FK+I LDEADA+T AQ ALRR + Sbjct: 67 WRDNFIEMNASDERGIDVVRHKIKEFARTAPIGGAPFKIIFLDEADALTADAQAALRRTM 126 Query: 135 ERYTKNTRFCVLANYAHKLTPALLSRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAE 194 E Y+K+ RF + NY ++ + SRC FRF+P+P+EA+++R+ + E +K++ + Sbjct: 127 EMYSKSCRFILSCNYVSRIIEPIQSRCAVFRFKPVPKEAMKKRLLEICEKEGVKITEDGL 186 Query: 195 KALIELSNGDMRRVLNVLQSCKATLDNPDEDEI 227 +ALI +S GD R+ +N LQ A + D D I Sbjct: 187 EALIYISGGDFRKAINALQGAAAIGEVVDADTI 219 >1SXJ-B nrPDB Length = 323 Score = 202 bits (515), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 113/317 (35%), Positives = 182/317 (57%), Gaps = 11/317 (3%) Query: 13 LPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYG 72 LPWVEKYRP+ L ++ G E I +++ +G +PH++ G PG GKT+++ LA E+ G Sbjct: 9 LPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLG 68 Query: 73 KNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKG-FKLIILDEADAMTNAAQNALR 131 ++Y++ VLELNASDDRGIDVVRNQIK FA + G K++ILDEAD+MT AQ ALR Sbjct: 69 RSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALR 128 Query: 132 RVIERYTKNTRFCVLANYAHKLTPALLSRCTRFRFQPLPQEAIERRIANVLVHEKLKLSP 191 R +E Y+ +TRF N ++K+ L S+C R+ L E + +R+ ++ E +K + Sbjct: 129 RTMELYSNSTRFAFACNQSNKIIEPLQSQCAILRYSKLSDEDVLKRLLQIIKLEDVKYTN 188 Query: 192 NAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYECCGAPRPSDL-KAVLKS 250 + +A+I + GDMR+ +N LQS A ++ D +++ +P P + K +L S Sbjct: 189 DGLEAIIFTAEGDMRQAINNLQSTVA-----GHGLVNADNVFKIVDSPHPLIVKKMLLAS 243 Query: 251 ILEDDWGTAHYTLNKVRSAKGLALIDLIEGIVKILEDYELQNEETRVHLLTKLADIEYSI 310 LED L K KG + ID++ ++ ++ E R+ ++ ++ I Sbjct: 244 NLEDSIQILRTDLWK----KGYSSIDIVTTSFRVTKNLAQVKESVRLEMIKEIGLTHMRI 299 Query: 311 SKGGNDQIQGSAVIGAI 327 +G +Q ++++ I Sbjct: 300 LEGVGTYLQLASMLAKI 316 >1SXJ-D nrPDB Length = 353 Score = 193 bits (491), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 114/324 (35%), Positives = 180/324 (55%), Gaps = 25/324 (7%) Query: 14 PWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGK 73 PWVEKYRP+ LDEV Q+ +T ++K + LPH+LFYGPPGTGKTSTI+AL +E+YG Sbjct: 26 PWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGP 85 Query: 74 N-YSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSK------------GFKLIILDEAD 120 + + +LELNASD+RGI +VR ++K+FA R SK +K+IILDEAD Sbjct: 86 DLMKSRILELNASDERGISIVREKVKNFA--RLTVSKPSKHDLENYPCPPYKIIILDEAD 143 Query: 121 AMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSRCTRFRFQPLPQEAIERRIAN 180 +MT AQ+ALRR +E Y+ TRFC++ NY ++ L S+C++FRF+ L R+ Sbjct: 144 SMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASQCSKFRFKALDASNAIDRLRF 203 Query: 181 VLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSC-KATLDNPDEDEISDDVIYECCGAP 239 + E +K + ++++S GD+RR + +LQS K D I+ + E G Sbjct: 204 ISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNITSTQVEELAGVV 263 Query: 240 RPSDLKAVLKSILEDDWGTAHYTLNKVRSAKGLALIDLIEGIVKILEDYELQNEETRVHL 299 L +++ + D+ +N + A +V L +Y + N+ + Sbjct: 264 PHDILIEIVEKVKSGDFDEIKKYVNTFMKSGWSA-----ASVVNQLHEYYITNDNFDTNF 318 Query: 300 LTKLADIEYS----ISKGGNDQIQ 319 +++ + ++ ++ G N+ IQ Sbjct: 319 KNQISWLLFTTDSRLNNGTNEHIQ 342 >1SXJ-E nrPDB Length = 354 Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 69/237 (29%), Positives = 125/237 (52%), Gaps = 38/237 (16%) Query: 15 WVEKYRPETLDEVYGQNEVITTVRKFVDEGK-LPHLLFYGPPGTGKTSTIVALAREIYGK 73 WV+KYRP++L+ + E+ ++ D+ + LPHLL YGP GTGK + +AL I+G Sbjct: 4 WVDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGP 63 Query: 74 NY-------------SNMVLELN---------------ASDDRGI------DVVRNQIKD 99 SN LELN ++DR + +V + + D Sbjct: 64 GVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVD 123 Query: 100 FASTRQIFSKGFKLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLS 159 F ++ + +K +I++EA+++T AQ ALRR +E+Y+KN R ++ + + + S Sbjct: 124 FQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKS 183 Query: 160 RCTRFRFQPLPQEA-IERRIANVLVHEKLKL-SPNAEKALIELSNGDMRRVLNVLQS 214 +C R P P ++ I +++V+ +E+++L + + K + + SNG++R L +L+S Sbjct: 184 QCLLIRC-PAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLES 239 >3U5Z-B nrPDB Length = 324 Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 68/216 (31%), Positives = 105/216 (48%), Gaps = 19/216 (8%) Query: 17 EKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGP-PGTGKTSTIVALAREIYGKNY 75 +KYRP T+DE T + +GK+PH++ + P PGTGKT+ AL ++ Sbjct: 18 QKYRPSTIDECILPAFDKETFKSITSKGKIPHIILHSPSPGTGKTTVAKALCHDVNAD-- 75 Query: 76 SNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNA-AQNALRRVI 134 ++ +N SD + ID VR + +FAS F K+I++DE D A +Q LR + Sbjct: 76 ---MMFVNGSDCK-IDFVRGPLTNFASAAS-FDGRQKVIVIDEFDRSGLAESQRHLRSFM 130 Query: 135 ERYTKNTRFCVLANYAHKLTPALLSRCTRFRF-QPLPQEAIE------RRIANVLVHEKL 187 E Y+ N + AN + L SRC F QP ++ IE RR+ + HE + Sbjct: 131 EAYSSNCSIIITANNIDGIIKPLQSRCRVITFGQPTDEDKIEMMKQMIRRLTEICKHEGI 190 Query: 188 KLSP-NAEKALIELSNGDMRRVLNVLQ--SCKATLD 220 ++ AL++ + D R+ + L S K LD Sbjct: 191 AIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLD 226 >1NJG-A nrPDB Length = 250 Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 58/227 (25%), Positives = 105/227 (46%), Gaps = 28/227 (12%) Query: 18 KYRPETLDEVYGQNEVITTVRKFVDEGKLPH-LLFYGPPGTGKTSTIVALA--------- 67 K+RP+T +V GQ V+T + + G++ H LF G G GKTS LA Sbjct: 16 KWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGI 75 Query: 68 -----------REIYGKNYSNMVLELNASDDRGIDVVRNQIKD--FASTRQIFSKGFKLI 114 REI + +++ E++A+ ++ R+ + + +A R FK+ Sbjct: 76 TATPCGVCDNCREIEQGRFVDLI-EIDAASRTKVEDTRDLLDNVQYAPAR----GRFKVY 130 Query: 115 ILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSRCTRFRFQPLPQEAI 174 ++DE ++ + NAL + +E ++ +F + KL +LSRC +F + L E I Sbjct: 131 LIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQI 190 Query: 175 ERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDN 221 ++ ++L E + P A + L + G +R L++ A+ D Sbjct: 191 RHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDG 237 >3GLF-B nrPDB Length = 395 Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 58/227 (25%), Positives = 105/227 (46%), Gaps = 28/227 (12%) Query: 18 KYRPETLDEVYGQNEVITTVRKFVDEGKLPH-LLFYGPPGTGKTSTIVALA--------- 67 K+RP+T +V GQ V+T + + G++ H LF G G GKTS LA Sbjct: 31 KWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGI 90 Query: 68 -----------REIYGKNYSNMVLELNASDDRGIDVVRNQIKD--FASTRQIFSKGFKLI 114 REI + +++ E++A+ ++ R+ + + +A R FK+ Sbjct: 91 TATPCGVCDNCREIEQGRFVDLI-EIDAASRTKVEDTRDLLDNVQYAPAR----GRFKVY 145 Query: 115 ILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSRCTRFRFQPLPQEAI 174 ++DE ++ + NAL + +E ++ +F + KL +LSRC +F + L E I Sbjct: 146 LIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQI 205 Query: 175 ERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDN 221 ++ ++L E + P A + L + G +R L++ A+ D Sbjct: 206 RHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDG 252 >3PVS-A nrPDB Length = 447 Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 63/237 (26%), Positives = 107/237 (45%), Gaps = 22/237 (9%) Query: 14 PWVEKYRPETLDEVYGQNEVITTVR---KFVDEGKLPHLLFYGPPGTGKTSTIVALAREI 70 P + RPE L + GQ ++ + + ++ G L ++ +GPPGTGKT+ +AR Sbjct: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIAR-- 72 Query: 71 YGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIIL-DEADAMTNAAQNA 129 Y+N +E ++ G+ +R I+ RQ + G + I+ DE + Q+A Sbjct: 73 ----YANADVERISAVTSGVKEIREAIE---RARQNRNAGRRTILFVDEVHRFNKSQQDA 125 Query: 130 LRRVIERYTKNTRFCVLANYAHKLTPALLSRCTRFRFQPLPQEAIERRIANVLVH----- 184 IE T N + +L ALLSR + + L E IE+ + + Sbjct: 126 FLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGY 185 Query: 185 --EKLKLSPNAEKALIELSNGDMRRVLNVLQSCK--ATLDNPDEDEISDDVIYECCG 237 + + L +A+ EL NGD RR LN L+ A +D+ + + +++ E G Sbjct: 186 GGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAG 242 >1SXJ-A nrPDB Length = 516 Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 72/286 (25%), Positives = 130/286 (45%), Gaps = 44/286 (15%) Query: 15 WVEKYRPETLDEVYGQNEVITTVRKFV-----------------DEGKLPHLLFYGPPGT 57 W KY P L +V G + ++ ++ G + YGPPG Sbjct: 29 WTVKYAPTNLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGI 88 Query: 58 GKTSTIVALAREIYGKNYSNMVLELNASDDRGIDV----VRNQIKDFA---------STR 104 GKT+ +A+E+ Y +LE NASD R + V+N + + + + Sbjct: 89 GKTTAAHLVAQEL---GYD--ILEQNASDVRSKTLLNAGVKNALDNMSVVGYFKHNEEAQ 143 Query: 105 QIFSKGFKLIILDEADAMTNAAQNALRRVIERYTK-NTRFCVLANYAH--KLTPALLSR- 160 + K F +II+DE D M+ + + ++ + K +T ++ N + K+ P R Sbjct: 144 NLNGKHF-VIIMDEVDGMSGGDRGGVGQLAQFCRKTSTPLILICNERNLPKMRP--FDRV 200 Query: 161 CTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLD 220 C +F+ +I+ R+ + + EK KL PN LI+ + GD+R+V+N+L + T Sbjct: 201 CLDIQFRRPDANSIKSRLMTIAIREKFKLDPNVIDRLIQTTRGDIRQVINLLSTISTTTK 260 Query: 221 NPDEDEISD-DVIYECCGAPRPSDL-KAVLKSILEDDWGTAHYTLN 264 + + I++ +E A +P D+ +L + D G+ ++TLN Sbjct: 261 TINHENINEISKAWEKNIALKPFDIAHKMLDGQIYSDIGSRNFTLN 306 >1HQC-A nrPDB Length = 324 Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 5/56 (8%) Query: 20 RPETLDEVYGQNEVITTVRKFVDEGK-----LPHLLFYGPPGTGKTSTIVALAREI 70 RP+TLDE GQ + +R +++ K L HLL +GPPG GKT+ +A E+ Sbjct: 7 RPKTLDEYIGQERLKQKLRVYLEAAKARKEPLEHLLLFGPPGLGKTTLAHVIAHEL 62 >5WVI-K nrPDB Length = 428 Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 48/161 (29%), Positives = 68/161 (42%), Gaps = 17/161 (10%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGK----NYSNMVLELNASDDRGI-DVVRNQIKDFAST 103 +L YGPPGTGKT + A+A N S V + R + DV R ++ S Sbjct: 209 VLLYGPPGTGKTMLVKAVANSTKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSI 268 Query: 104 RQIFSKGFKLIILDEADAMTNAAQNALRRVIERYTK--------NTRFCVLANYAHKLTP 155 IF I DA T + + R +IE T+ N + + N A L P Sbjct: 269 --IFIDEVDSIATKRFDAQTGSDREVQRILIELLTQMDGFDQSTNVKVIMATNRADTLDP 326 Query: 156 ALL--SRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAE 194 ALL R R P ++ ERR+ + K+ L+P A+ Sbjct: 327 ALLRPGRLDRKIEFPSLRDRRERRLIFGTIASKMSLAPEAD 367 >6EF1-K nrPDB Length = 276 Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 48/161 (29%), Positives = 68/161 (42%), Gaps = 17/161 (10%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGK----NYSNMVLELNASDDRGI-DVVRNQIKDFAST 103 +L YGPPGTGKT + A+A N S V + R + DV R ++ S Sbjct: 57 VLLYGPPGTGKTMLVKAVANSTKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSI 116 Query: 104 RQIFSKGFKLIILDEADAMTNAAQNALRRVIERYTK--------NTRFCVLANYAHKLTP 155 IF I DA T + + R +IE T+ N + + N A L P Sbjct: 117 --IFIDEVDSIATKRFDAQTGSDREVQRILIELLTQMDGFDQSTNVKVIMATNRADTLDP 174 Query: 156 ALL--SRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAE 194 ALL R R P ++ ERR+ + K+ L+P A+ Sbjct: 175 ALLRPGRLDRKIEFPSLRDRRERRLIFGTIASKMSLAPEAD 215 >6CHS-H nrPDB Length = 819 Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 48/160 (30%), Positives = 70/160 (43%), Gaps = 35/160 (21%) Query: 39 KFVDEGKLPH--LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQ 96 KF+ G P +LFYGPPGTGKT A+A E N+ ++ +G +++ Sbjct: 519 KFLKFGLSPSRGVLFYGPPGTGKTMLAKAVANEC-AANFISV---------KGPELLSMW 568 Query: 97 IKDFAST-RQIFSKGFK----LIILDEADAMTNA-------AQNALRRVIERY------- 137 + S R IF K ++ LDE D++ A A A RV+ + Sbjct: 569 FGESESNIRDIFDKARAAAPCVVFLDELDSIAKARGGSIGDAGGASDRVVNQLLTEMDGM 628 Query: 138 -TKNTRFCVLA-NYAHKLTPALL--SRCTRFRFQPLPQEA 173 +K F + A N +L PAL R + + PLP EA Sbjct: 629 TSKKNVFVIGATNRPEQLDPALCRPGRLDQLIYVPLPDEA 668 Score = 31.2 bits (69), Expect = 0.75, Method: Compositional matrix adjust. Identities = 13/21 (61%), Positives = 15/21 (71%) Query: 49 LLFYGPPGTGKTSTIVALARE 69 +L YGPPGTGKT A+A E Sbjct: 257 VLLYGPPGTGKTLMARAVANE 277 >6EPD-M nrPDB Length = 442 Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 51/177 (28%), Positives = 78/177 (44%), Gaps = 32/177 (18%) Query: 39 KFVDEGKLP--HLLFYGPPGTGKT---STIVALAREIYGKNYSNMVLELNASDDRGIDVV 93 KF + G P +L YGPPGTGKT A + + K ++++ D G +V Sbjct: 214 KFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD--GAKLV 271 Query: 94 RNQIKDFASTRQIFSKGFKLIILDEADAMTNA---AQNALRRVIER-----------YTK 139 R+ FA ++ K +I +DE DA+ ++ A R ++R + Sbjct: 272 RDA---FALAKE---KAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQP 325 Query: 140 NTRFCVLA--NYAHKLTPALL--SRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPN 192 NT+ V+A N L PALL R R P+P E RI + K+ +SP+ Sbjct: 326 NTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIH-SRKMNVSPD 381 >5EQT-A nrPDB Length = 257 Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 51/180 (28%), Positives = 76/180 (42%), Gaps = 38/180 (21%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDR--GIDVVRNQIKDFAS-TRQ 105 +L YGPPG GKT ALA E+ NA+ R G ++VR I + A + Sbjct: 42 VLLYGPPGCGKTLMAKALAHEV------------NATFIRVVGSELVRKYIGEGARLVHE 89 Query: 106 IF----SKGFKLIILDEADAM-------TNAAQNALRRVIERYTK---------NTRFCV 145 +F K +I +DE DA+ T + + R + + N + Sbjct: 90 LFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIA 149 Query: 146 LANYAHKLTPALLSRCTRF-RFQPLPQEAIERRIANVLVH-EKLKLSPNAEKALIELSNG 203 N L PALL R RF R +P E R+ + VH ++KL +A+ E++ G Sbjct: 150 ATNRPDILDPALL-RPGRFDRLIEVPLPDFEGRLEILKVHTRRMKLKGVDLRAIAEMTEG 208 >5C18-A nrPDB Length = 785 Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 49/226 (21%) Query: 39 KFVDEGKLPH--LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQ 96 KF+ G P +LFYGPPG GKT A+A E N+ ++ +G +++ Sbjct: 501 KFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQA-NFISI---------KGPELLTMW 550 Query: 97 IKDF-ASTRQIFSKGFK----LIILDEADAMTNA-------AQNALRRVIERY------- 137 + A+ R+IF K + ++ DE D++ A A RVI + Sbjct: 551 FGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGM 610 Query: 138 -TKNTRFCVLA-NYAHKLTPALL--SRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNA 193 TK F + A N + PA+L R + + PLP E + R+A ++ L+ SP A Sbjct: 611 STKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE--KSRVA--ILKANLRKSPVA 666 Query: 194 EKA----LIELSNG----DMRRVLNVLQSCKATLDNPDEDEISDDV 231 + L +++NG D+ + ++CK + E EI ++ Sbjct: 667 KDVDLEFLAKMTNGFSGADLTEICQ--RACKLAIRESIESEIRPEI 710 Score = 31.2 bits (69), Expect = 0.63, Method: Compositional matrix adjust. Identities = 13/21 (61%), Positives = 15/21 (71%) Query: 49 LLFYGPPGTGKTSTIVALARE 69 +L YGPPGTGKT A+A E Sbjct: 240 ILLYGPPGTGKTLIARAVANE 260 >5VFP-F nrPDB Length = 396 Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 51/177 (28%), Positives = 78/177 (44%), Gaps = 32/177 (18%) Query: 39 KFVDEGKLP--HLLFYGPPGTGKT---STIVALAREIYGKNYSNMVLELNASDDRGIDVV 93 KF + G P +L YGPPGTGKT A + + K ++++ D G +V Sbjct: 168 KFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD--GAKLV 225 Query: 94 RNQIKDFASTRQIFSKGFKLIILDEADAMTNA---AQNALRRVIER-----------YTK 139 R+ FA ++ K +I +DE DA+ ++ A R ++R + Sbjct: 226 RDA---FALAKE---KAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQP 279 Query: 140 NTRFCVLA--NYAHKLTPALL--SRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPN 192 NT+ V+A N L PALL R R P+P E RI + K+ +SP+ Sbjct: 280 NTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIH-SRKMNVSPD 335 >5VHO-F nrPDB Length = 267 Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust. Identities = 51/177 (28%), Positives = 78/177 (44%), Gaps = 32/177 (18%) Query: 39 KFVDEGKLP--HLLFYGPPGTGKT---STIVALAREIYGKNYSNMVLELNASDDRGIDVV 93 KF + G P +L YGPPGTGKT A + + K ++++ D G +V Sbjct: 46 KFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD--GAKLV 103 Query: 94 RNQIKDFASTRQIFSKGFKLIILDEADAMTNA---AQNALRRVIER-----------YTK 139 R+ FA ++ K +I +DE DA+ ++ A R ++R + Sbjct: 104 RDA---FALAKE---KAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQP 157 Query: 140 NTRFCVLA--NYAHKLTPALL--SRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPN 192 NT+ V+A N L PALL R R P+P E RI + K+ +SP+ Sbjct: 158 NTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIH-SRKMNVSPD 213 >3CF0-A nrPDB Length = 301 Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust. Identities = 54/194 (27%), Positives = 87/194 (44%), Gaps = 43/194 (22%) Query: 39 KFVDEGKLPH--LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQ 96 KF+ G P +LFYGPPG GKT A+A E N+ ++ +G +++ Sbjct: 40 KFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQA-NFISI---------KGPELLTMW 89 Query: 97 IKDF-ASTRQIFSKGFK----LIILDEADAMTNA-------AQNALRRVIERY------- 137 + A+ R+IF K + ++ DE D++ A A RVI + Sbjct: 90 FGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGM 149 Query: 138 -TKNTRFCVLA-NYAHKLTPALL--SRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNA 193 TK F + A N + PA+L R + + PLP E + R+A ++ L+ SP A Sbjct: 150 STKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE--KSRVA--ILKANLRKSPVA 205 Query: 194 EKA----LIELSNG 203 + L +++NG Sbjct: 206 KDVDLEFLAKMTNG 219 >6MCK-A nrPDB Length = 606 Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust. Identities = 54/194 (27%), Positives = 87/194 (44%), Gaps = 43/194 (22%) Query: 39 KFVDEGKLPH--LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQ 96 KF+ G P +LFYGPPG GKT A+A E N+ ++ +G +++ Sbjct: 294 KFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQA-NFISI---------KGPELLTMW 343 Query: 97 IKDF-ASTRQIFSKGFK----LIILDEADAMTNA-------AQNALRRVIERY------- 137 + A+ R+IF K + ++ DE D++ A A RVI + Sbjct: 344 FGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGM 403 Query: 138 -TKNTRFCVLA-NYAHKLTPALL--SRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNA 193 TK F + A N + PA+L R + + PLP E + R+A ++ L+ SP A Sbjct: 404 STKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE--KSRVA--ILKANLRKSPVA 459 Query: 194 EKA----LIELSNG 203 + L +++NG Sbjct: 460 KDVDLEFLAKMTNG 473 Score = 31.2 bits (69), Expect = 0.64, Method: Compositional matrix adjust. Identities = 13/21 (61%), Positives = 15/21 (71%) Query: 49 LLFYGPPGTGKTSTIVALARE 69 +L YGPPGTGKT A+A E Sbjct: 33 ILLYGPPGTGKTLIARAVANE 53 >6EF0-L nrPDB Length = 273 Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust. Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 33/178 (18%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFAS-TRQIF 107 +L YGPPGTGKT LA+ + +N + + +V I + A R++F Sbjct: 55 VLLYGPPGTGKT----LLAKAVAATIGANFIFSPASG------IVDKYIGESARIIREMF 104 Query: 108 SKGFK----LIILDEADAM--------TNAAQNALRRVIERYTK--------NTRFCVLA 147 + + +I +DE DA+ T+A + R ++E T+ T+ + Sbjct: 105 AYAKEHEPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLTQMDGFDNLGQTKIIMAT 164 Query: 148 NYAHKLTPALL--SRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNG 203 N L PALL R R PLP EA I + + K +A +++S+G Sbjct: 165 NRPDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSDG 222 >5WVI-L nrPDB Length = 437 Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust. Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 33/178 (18%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFAS-TRQIF 107 +L YGPPGTGKT LA+ + +N + + +V I + A R++F Sbjct: 218 VLLYGPPGTGKT----LLAKAVAATIGANFIFSPASG------IVDKYIGESARIIREMF 267 Query: 108 SKGFK----LIILDEADAM--------TNAAQNALRRVIERYTK--------NTRFCVLA 147 + + +I +DE DA+ T+A + R ++E T+ T+ + Sbjct: 268 AYAKEHEPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLTQMDGFDNLGQTKIIMAT 327 Query: 148 NYAHKLTPALL--SRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNG 203 N L PALL R R PLP EA I + + K +A +++S+G Sbjct: 328 NRPDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSDG 385 >6FVU-L nrPDB Length = 388 Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust. Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 33/178 (18%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFAS-TRQIF 107 +L YGPPGTGKT LA+ + +N + + +V I + A R++F Sbjct: 170 VLLYGPPGTGKT----LLAKAVAATIGANFIFSPASG------IVDKYIGESARIIREMF 219 Query: 108 SKGFK----LIILDEADAM--------TNAAQNALRRVIERYTK--------NTRFCVLA 147 + + +I +DE DA+ T+A + R ++E T+ T+ + Sbjct: 220 AYAKEHEPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLTQMDGFDNLGQTKIIMAT 279 Query: 148 NYAHKLTPALL--SRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNG 203 N L PALL R R PLP EA I + + K +A +++S+G Sbjct: 280 NRPDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSDG 337 >1IN6-A nrPDB Length = 334 Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 18/127 (14%) Query: 16 VEKYRPETLDEVYGQNEVITTVRKFVDEGK-----LPHLLFYGPPGTGKTSTIVALAREI 70 V+ RP++LDE GQ V + ++ K L H+L GPPG G+T+ +A E Sbjct: 16 VQFLRPKSLDEFIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGRTTLAHIIASE- 74 Query: 71 YGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNAAQNAL 130 L+ N G +V+ D A+ +G ++ +DE + A + L Sbjct: 75 ---------LQTNIHVTSGPVLVKQ--GDMAAILTSLERG-DVLFIDEIHRLNKAVEELL 122 Query: 131 RRVIERY 137 IE + Sbjct: 123 YSAIEDF 129 >4D81-A nrPDB Length = 283 Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust. Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 46/224 (20%) Query: 16 VEKYRPE-TLDEVYGQNEVITTVRK-FVDEGKLPHL---------LFYGPPGTGKTSTIV 64 V K +P+ TL+E+ G +V +++ V K P L L YGPPG GKT Sbjct: 4 VMKEKPKVTLNEIVGLEDVKEALKEAVVYPSKRPDLFPLGWPRGILLYGPPGCGKTMIAA 63 Query: 65 ALARE-----IYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFK--LIILD 117 A+A E I+ S M L ++ +N K F + R++ K K +I +D Sbjct: 64 AVANELDSEFIHVDAASIMSKWLGEAE-------KNVAKIFKTARELSKKENKPAIIFID 116 Query: 118 EADAMTNAAQNAL---RRVIERYTKN----------TRFCVLA--NYAHKLTPALLSRCT 162 E DA+ + + + RV ++ K ++ V+ N +L L R Sbjct: 117 ELDALLASYTSEVGGEARVRNQFLKEMDGLADKNEISKVYVIGATNKPWRLDEPFLRRFQ 176 Query: 163 RFRFQPLPQEAIERRIANVLVH--EKLKLSPNAE-KALIELSNG 203 + + LP +A R+ +L H K+KL PN + L EL++G Sbjct: 177 KRIYITLPDKA--HRL-ELLKHYSSKVKLDPNVNLEELAELTDG 217 >6QEL-G nrPDB Length = 245 Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust. Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 6/66 (9%) Query: 17 EKYRPETLDEVYGQNEVITTVRKFVDE--GKLPHLLFYGPPGTGKTSTIVALAREIYGKN 74 E YR E GQ ++ R++V+E G + +F G PGTGK A+ E+ + Sbjct: 72 ENYRVE----CEGQMNALSKARQYVEEFDGNIASFIFSGKPGTGKNHLAAAICNELLLRG 127 Query: 75 YSNMVL 80 S +++ Sbjct: 128 KSVLII 133 >3EC2-A nrPDB Length = 180 Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 11/63 (17%) Query: 16 VEKYRPETLDEVYGQNEVITTVRKFV-----DEGKLPHLLFYGPPGTGKTSTIVALAREI 70 ++ Y P+ + QN + T+R FV +EGK L F G PG GKT VA + I Sbjct: 9 LDTYHPKNV----SQNRALLTIRVFVHNFNPEEGK--GLTFVGSPGVGKTHLAVATLKAI 62 Query: 71 YGK 73 Y K Sbjct: 63 YEK 65 >3WHK-A nrPDB Length = 270 Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust. Identities = 42/149 (28%), Positives = 59/149 (39%), Gaps = 37/149 (24%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDR--GIDVVRNQIKDFAS-TRQ 105 +L YGPPG GKT A+A E+ NA+ R G ++VR I + A + Sbjct: 54 VLLYGPPGCGKTLMAKAIAHEV------------NATFIRVVGSELVRKYIGEGARLVHE 101 Query: 106 IF----SKGFKLIILDEADAM-------TNAAQNALRRVIERYTK---------NTRFCV 145 +F K +I +DE DA+ T + + R + + N + Sbjct: 102 LFELAKEKAPTIIFIDEIDAIGAKRLDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIA 161 Query: 146 LANYAHKLTPALL--SRCTRFRFQPLPQE 172 N L PALL R R PLP E Sbjct: 162 ATNRPDILDPALLRPGRFDRLIEVPLPDE 190 >1LV7-A nrPDB Length = 257 Score = 36.2 bits (82), Expect = 0.021, Method: Compositional matrix adjust. Identities = 53/203 (26%), Positives = 81/203 (39%), Gaps = 54/203 (26%) Query: 44 GKLPH-LLFYGPPGTGKTSTIVALARE-------IYGKNYSNMVLELNASDDRGIDVVRN 95 GK+P +L GPPGTGKT A+A E I G ++ M + + AS Sbjct: 42 GKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGAS---------- 91 Query: 96 QIKDFASTRQIFSKGFK----LIILDEADAMT--------------NAAQNALRRVIERY 137 R +F + K +I +DE DA+ N + ++ + Sbjct: 92 ------RVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGF 145 Query: 138 TKNTRFCVLA--NYAHKLTPALLSRCTRFRFQ---PLPQEAIERRIANVLVHEKLKLSPN 192 N V+A N L PALL R RF Q LP +I V + ++ L+P+ Sbjct: 146 EGNEGIIVIAATNRPDVLDPALL-RPGRFDRQVVVGLPDVRGREQILKVHMR-RVPLAPD 203 Query: 193 AEKALIE-----LSNGDMRRVLN 210 + A+I S D+ ++N Sbjct: 204 IDAAIIARGTPGFSGADLANLVN 226 >5VC7-A nrPDB Length = 564 Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust. Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 36/226 (15%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDF-ASTRQIF 107 L YGPPG GKT LA+ + ++ +N + +G +V+ + + + R+IF Sbjct: 323 FLLYGPPGVGKT----LLAKAVATESNANFI------SIKGPEVLSKWVGESEKAIREIF 372 Query: 108 SKGFK----LIILDEADAM-----TNAAQNALRRVIERY--------TKNTRFCVLA-NY 149 K + ++ LDE D++ T + R++ + N + A N Sbjct: 373 KKAKQVAPAIVFLDEIDSIAPRRGTTSDSGVTERIVNQLLTSLDGIEVMNGVVVIGATNR 432 Query: 150 AHKLTPALLSRCTRF-RFQPLPQEAIERRIANVLVHEK-LKLSPNAE-KALIELSNGDMR 206 + PALL R RF + +P E R++ + VH K + L+P+ + + + + G + Sbjct: 433 PDIMDPALL-RAGRFDKLIYIPPPDKEARLSILKVHTKNMPLAPDVDLNDIAQRTEGYVG 491 Query: 207 RVLNVL---QSCKATLDNPDEDEISDDVIYECCGAPRPSDLKAVLK 249 L L A +NPD +S + RPS + V+K Sbjct: 492 ADLENLCREAGMNAYRENPDATSVSQKNFLDALKTIRPSVDEEVIK 537 Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 13/79 (16%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFS 108 ++ YGPPGTGKT A+A E G N+ L +N + +++ K R+IFS Sbjct: 46 VILYGPPGTGKTLIARAVANE-SGANF----LSINGPEIMSKYYGQSEQK----LREIFS 96 Query: 109 KGFK----LIILDEADAMT 123 K + +I +DE D++ Sbjct: 97 KAEETAPSIIFIDEIDSIA 115 >5G4G-A nrPDB Length = 721 Score = 35.8 bits (81), Expect = 0.029, Method: Compositional matrix adjust. Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 36/226 (15%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDF-ASTRQIF 107 L YGPPG GKT LA+ + ++ +N + +G +V+ + + + R+IF Sbjct: 499 FLLYGPPGVGKT----LLAKAVATESNANFI------SIKGPEVLSKWVGESEKAIREIF 548 Query: 108 SKGFK----LIILDEADAM-----TNAAQNALRRVIERY--------TKNTRFCVLA-NY 149 K + ++ LDE D++ T + R++ + N + A N Sbjct: 549 KKAKQVAPAIVFLDEIDSIAPRRGTTSDSGVTERIVNQLLTSLDGIEVMNGVVVIGATNR 608 Query: 150 AHKLTPALLSRCTRF-RFQPLPQEAIERRIANVLVHEK-LKLSPNAE-KALIELSNGDMR 206 + PALL R RF + +P E R++ + VH K + L+P+ + + + + G + Sbjct: 609 PDIMDPALL-RAGRFDKLIYIPPPDKEARLSILKVHTKNMPLAPDVDLNDIAQRTEGYVG 667 Query: 207 RVLNVL---QSCKATLDNPDEDEISDDVIYECCGAPRPSDLKAVLK 249 L L A +NPD +S + RPS + V+K Sbjct: 668 ADLENLCREAGMNAYRENPDATSVSQKNFLDALKTIRPSVDEEVIK 713 Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 13/78 (16%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFS 108 ++ YGPPGTGKT A+A E G N+ L +N + +++ K R+IFS Sbjct: 222 VILYGPPGTGKTLIARAVANE-SGANF----LSINGPEIMSKYYGQSEQK----LREIFS 272 Query: 109 KGFK----LIILDEADAM 122 K + +I +DE D++ Sbjct: 273 KAEETAPSIIFIDEIDSI 290 >6HE4-H nrPDB Length = 267 Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust. Identities = 48/179 (26%), Positives = 77/179 (43%), Gaps = 35/179 (19%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFAS-TRQIF 107 +L YGPPGTGKT LA+ + + + + + G + V+ I + A R++F Sbjct: 56 VLLYGPPGTGKT----LLAKAVANQTRATFIRVV------GSEFVQKYIGEGARLVREVF 105 Query: 108 S----KGFKLIILDEADAM----TNAAQNALRRVIERYTK------------NTRFCVLA 147 K +I +DE DA+ TN+ + R V + + + Sbjct: 106 QLAKEKAPSIIFIDELDAIAARRTNSDTSGDREVQRTMMQLLAELDGFDPRGDVKVIGAT 165 Query: 148 NYAHKLTPALLSRCTRF-RFQPLPQEAIERRIANVLVH-EKLKLSPNAE-KALIELSNG 203 N L PA+L R RF R +P E RI +H K+KL+ + + K L ++ G Sbjct: 166 NRIDILDPAIL-RPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKELARITEG 223 >6AZ0-A nrPDB Length = 439 Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust. Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 21/113 (18%) Query: 24 LDEVYGQNEVITTVRKFVD-----------EGKLPH-LLFYGPPGTGKTSTIVALAREIY 71 D+V G +E + + VD GKLP +L GPPGTGKT LAR Sbjct: 2 FDDVCGCDEARAELEEIVDFLKDPTKYESLGGKLPKGVLLTGPPGTGKT----LLARATA 57 Query: 72 GKNYSNMVLELNAS-DDRGIDVVRNQIKD-FASTRQIFSKGFKLIILDEADAM 122 G+ + + D+ + V +I+D FA R S+ +I +D+ DA+ Sbjct: 58 GEAGVDFFFMSGSEFDEVYVGVGAKRIRDLFAQAR---SRAPAIIFIDQLDAI 107 >4M4W-J nrPDB Length = 317 Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust. Identities = 17/48 (35%), Positives = 27/48 (56%) Query: 33 VITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVL 80 V ++ + + GK L YG G GKT + A+A E+ K YS+M++ Sbjct: 148 VTDFLKSYNETGKGKGLYLYGKFGVGKTFMLAAIANELAEKEYSSMIV 195 >5VQ9-D nrPDB Length = 432 Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust. Identities = 25/96 (26%), Positives = 49/96 (51%), Gaps = 18/96 (18%) Query: 49 LLFYGPPGTGKTSTIVALAREI---------YGK----NYSNMVLELNASDDRGIDVVRN 95 +L +GPPGTGKTS ALA+++ YG+ N ++ + + + + + Sbjct: 175 VLLHGPPGTGKTSLCKALAQKLTIRLSSRYRYGQLIEINSHSLFSKWFSESGKLVTKMFQ 234 Query: 96 QIKDFASTRQIFSKGFKLIILDEADAMTNAAQNALR 131 +I+D + +++D+ +++T AA+NA R Sbjct: 235 KIQDLIDDKD----ALVFVLIDQVESLT-AARNACR 265 >6HE9-H nrPDB Length = 390 Score = 35.4 bits (80), Expect = 0.037, Method: Compositional matrix adjust. Identities = 48/179 (26%), Positives = 77/179 (43%), Gaps = 35/179 (19%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFAS-TRQIF 107 +L YGPPGTGKT LA+ + + + + + G + V+ I + A R++F Sbjct: 170 VLLYGPPGTGKT----LLAKAVANQTRATFIRVV------GSEFVQKYIGEGARLVREVF 219 Query: 108 S----KGFKLIILDEADAM----TNAAQNALRRVIERYTK------------NTRFCVLA 147 K +I +DE DA+ TN+ + R V + + + Sbjct: 220 QLAKEKAPSIIFIDELDAIAARRTNSDTSGDREVQRTMMQLLAELDGFDPRGDVKVIGAT 279 Query: 148 NYAHKLTPALLSRCTRF-RFQPLPQEAIERRIANVLVH-EKLKLSPNAE-KALIELSNG 203 N L PA+L R RF R +P E RI +H K+KL+ + + K L ++ G Sbjct: 280 NRIDILDPAIL-RPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKELARITEG 337 >3H4M-A nrPDB Length = 285 Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 19/89 (21%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDR--GIDVVRNQIKDFAS-TRQ 105 +L YGPPGTGKT A+A E NA+ R G ++V+ I + AS + Sbjct: 54 ILLYGPPGTGKTLLAKAVATET------------NATFIRVVGSELVKKFIGEGASLVKD 101 Query: 106 IF----SKGFKLIILDEADAMTNAAQNAL 130 IF K +I +DE DA+ +AL Sbjct: 102 IFKLAKEKAPSIIFIDEIDAIAAKRTDAL 130 >5A5B-M nrPDB Length = 434 Score = 35.0 bits (79), Expect = 0.049, Method: Compositional matrix adjust. Identities = 50/160 (31%), Positives = 69/160 (43%), Gaps = 37/160 (23%) Query: 39 KFVDEG-KLPH-LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASD------DRGI 90 KF D G + P L YGPPGTGKT LAR + + L+L A G Sbjct: 206 KFKDMGIRAPKGALMYGPPGTGKT----LLARACAAQTNATF-LKLAAPQLVQMYIGEGA 260 Query: 91 DVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNA---AQNALRRVIER----------- 136 +VR+ FA ++ K +I +DE DA+ ++ + R ++R Sbjct: 261 KLVRDA---FALAKE---KAPTIIFIDELDAIGTKRFDSEKSGDREVQRTMLELLNQLDG 314 Query: 137 YTKNTRFCVLA--NYAHKLTPALL--SRCTRFRFQPLPQE 172 ++ + R VLA N L PALL R R PLP E Sbjct: 315 FSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSE 354 >3PFI-A nrPDB Length = 338 Score = 35.0 bits (79), Expect = 0.049, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 5/47 (10%) Query: 20 RPETLDEVYGQNEVITTVRKFVDEGK-----LPHLLFYGPPGTGKTS 61 RP D GQ + + F+ K L H+LF GP G GKT+ Sbjct: 24 RPSNFDGYIGQESIKKNLNVFIAAAKKRNECLDHILFSGPAGLGKTT 70 >6AP1-A nrPDB Length = 519 Score = 34.7 bits (78), Expect = 0.056, Method: Compositional matrix adjust. Identities = 38/155 (24%), Positives = 60/155 (38%), Gaps = 38/155 (24%) Query: 45 KLPHL-----------LFYGPPGTGKTSTIVALARE----IYGKNYSNMVLELNASDDRG 89 K PHL L YGPPGTGK+ A+A E + + S++V + ++ Sbjct: 55 KFPHLFKGNRKPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKL 114 Query: 90 IDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTN----AAQNALRRV----------IE 135 + + FA R+ +I +DE DA+T A RR+ + Sbjct: 115 VKQL------FAMARE---NKPSIIFIDEVDALTGTRGEGESEASRRIKTELLVQMNGVG 165 Query: 136 RYTKNTRFCVLANYAHKLTPALLSRCTRFRFQPLP 170 ++ N +L A+ R R + PLP Sbjct: 166 NDSQGVLVLGATNIPWQLDSAIRRRFERRIYIPLP 200 >6BLB-A nrPDB Length = 355 Score = 34.7 bits (78), Expect = 0.063, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 7/69 (10%) Query: 20 RPETLDEVYGQNEVITTVRKFVDEGK-----LPHLLFYGPPGTGKTS--TIVALAREIYG 72 RP L + GQ V + F+ + L H L +GPPG GKT+ I+A + Sbjct: 28 RPLKLADYIGQPSVREQMELFIHAARGRQEALDHTLIFGPPGLGKTTLANIIAQEMGVSI 87 Query: 73 KNYSNMVLE 81 K+ S VLE Sbjct: 88 KSTSGPVLE 96 >6EF0-M nrPDB Length = 258 Score = 34.3 bits (77), Expect = 0.076, Method: Compositional matrix adjust. Identities = 50/160 (31%), Positives = 69/160 (43%), Gaps = 37/160 (23%) Query: 39 KFVDEG-KLPH-LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASD------DRGI 90 KF D G + P L YGPPGTGKT LAR + + L+L A G Sbjct: 31 KFKDMGIRAPKGALMYGPPGTGKT----LLARACAAQTNATF-LKLAAPQLVQMYIGEGA 85 Query: 91 DVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNA---AQNALRRVIER----------- 136 +VR+ FA ++ K +I +DE DA+ ++ + R ++R Sbjct: 86 KLVRDA---FALAKE---KAPTIIFIDELDAIGTKRFDSEKSGDREVQRTMLELLNQLDG 139 Query: 137 YTKNTRFCVLA--NYAHKLTPALL--SRCTRFRFQPLPQE 172 ++ + R VLA N L PALL R R PLP E Sbjct: 140 FSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSE 179 >2R65-A nrPDB Length = 268 Score = 34.3 bits (77), Expect = 0.087, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 64/151 (42%), Gaps = 39/151 (25%) Query: 45 KLPH-LLFYGPPGTGKTSTIVALAREIY-------GKNYSNMVLELNASDDRGIDVVRNQ 96 K+P +L GPPGTGKT A+A E + G ++ M + L AS + Sbjct: 42 KIPKGVLLVGPPGTGKTLLAKAVAGEAHVPFFSMGGSSFIEMFVGLGAS----------R 91 Query: 97 IKDFASTRQIFSKGFKLIILDEADAM--TNAAQNALRRVIER--------------YTKN 140 ++D T + + +I +DE DA+ + AA + ER ++N Sbjct: 92 VRDLFETAK--KQAPSIIFIDEIDAIGKSRAAGGVVSGNDEREQTLNQLLAEMDGFGSEN 149 Query: 141 TRFCVLA--NYAHKLTPALLSRCTRFRFQPL 169 VLA N L PAL+ R RF Q L Sbjct: 150 APVIVLAATNRPEILDPALM-RPGRFDRQVL 179 >4LCB-A nrPDB Length = 367 Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust. Identities = 38/139 (27%), Positives = 57/139 (41%), Gaps = 19/139 (13%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFS 108 +L YGPPG GKT A+A EI +Y V + + +N K F + R+ Sbjct: 133 ILLYGPPGNGKTMLAAAVANEI--DSYFIHVDAASIMSKWLGEAEKNVAKIFNTAREYSK 190 Query: 109 KGFK--LIILDEADAMTNAAQNALR---RVIERY--------TKNTRFCVLA----NYAH 151 K K +I +DE DA+ + + RV ++ KN + V N Sbjct: 191 KDNKPAIIFVDEIDALLGTYTSEVGGEVRVRNQFLKEMDGIMDKNENYMVYVIGATNKPW 250 Query: 152 KLTPALLSRCTRFRFQPLP 170 +L L R + + PLP Sbjct: 251 RLDEPFLRRFQKRIYVPLP 269 >5V8F-9 nrPDB Length = 513 Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 6/64 (9%) Query: 32 EVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGID 91 +V+ + K + E + L GPPGTGKT+ + + R+ + L L+ S R D Sbjct: 87 QVMNFLAKAISEHRSDSLYITGPPGTGKTAQLDMIIRQKFQS------LPLSLSTPRSKD 140 Query: 92 VVRN 95 V+R+ Sbjct: 141 VLRH 144 >3SYK-A nrPDB Length = 309 Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust. Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 22/168 (13%) Query: 48 HLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFA-STRQI 106 H+ F G PGTGKT+ + +A ++ Y ++ + D D+V I A T+++ Sbjct: 69 HMSFTGNPGTGKTTVALKMAGLLHRLGYVRKGHLVSVTRD---DLVGQYIGHTAPKTKEV 125 Query: 107 FSKGF-KLIILDEA------DAMTNAAQNALRRVIERYTKNTR---FCVLANYAHKL--- 153 + ++ +DEA D + Q A+ ++ + +N R +LA YA ++ Sbjct: 126 LKRAMGGVLFIDEAYYLYRPDNERDYGQEAI-EILLQVMENNRDDLVVILAGYADRMENF 184 Query: 154 ---TPALLSRCT-RFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKAL 197 P SR F E + ++L + +++P AE AL Sbjct: 185 FQSNPGFRSRIAHHIEFPDYSDEELFEIAGHMLDDQNYQMTPEAETAL 232 >5UBV-A nrPDB Length = 246 Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust. Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 29/189 (15%) Query: 44 GKLPH-LLFYGPPGTGKTSTIVALAREIYGK-NYSNMVLELNASDDRGIDVVRNQIKDFA 101 GKLP +L GPPGTGKT LAR + G+ + + D+ + V ++++ Sbjct: 36 GKLPKGVLLVGPPGTGKT----LLARAVAGEAGVPFFYMSGSEFDEIYVGVGAKRVRELF 91 Query: 102 STRQIFSKGFKLIILDEADAMTN-----------AAQNALRRVIERYTKNTRFCVLA--N 148 + + +K ++ +DE DA+ N L ++ + +N+ +L N Sbjct: 92 NAAK--AKAPSIVFIDELDAIGGRRNSRDATYVRQTLNQLLTEMDGFAQNSGVIILGATN 149 Query: 149 YAHKLTPALLSRCTRF-RFQPLPQEAIERRIANVLVH-EKLKLSPNAEKALIE-----LS 201 + L A L+R RF R + + RIA + H +K+K+ + A I LS Sbjct: 150 FPESLDKA-LTRPGRFDRHVHVSLPDVRGRIAILKHHAKKIKIGSDVNIAAIAARTSGLS 208 Query: 202 NGDMRRVLN 210 ++ ++N Sbjct: 209 GAELENIVN 217 >5VHP-E nrPDB Length = 262 Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust. Identities = 51/186 (27%), Positives = 77/186 (41%), Gaps = 37/186 (19%) Query: 50 LFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFAS-TRQIFS 108 L YGPPGTGKT LAR + + N + +++S +V I + A R++F+ Sbjct: 44 LLYGPPGTGKT----LLARAVASQLDCNFLKVVSSS------IVDKYIGESARLIREMFN 93 Query: 109 KGFK----LIILDEADAM--------TNAAQNALRRVIERYTKNTRFCVL--------AN 148 +I +DE DA+ T+A + R ++E + F L N Sbjct: 94 YARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATN 153 Query: 149 YAHKLTPALL--SRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNG--- 203 L PALL R R LP E I + K +A+++LS+G Sbjct: 154 RPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNG 213 Query: 204 -DMRRV 208 D+R V Sbjct: 214 ADLRNV 219 >4LGM-A nrPDB Length = 295 Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 60/142 (42%), Gaps = 25/142 (17%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGI---DVVRNQIKDFASTRQ 105 +L YGPPG GKT A+A EI ++ ++L+A+ + +N F R+ Sbjct: 60 ILLYGPPGCGKTMIAAAVANEI-----DSIFMQLDAASVMSKWLGEAEKNVANVFKMARE 114 Query: 106 IFSKGFK--LIILDEADAMTNAAQNAL---RRVIERYTK----------NTRFCVLA--N 148 K K +I +D+ DA+ + RV ++ K N + V+ N Sbjct: 115 ESKKQNKPAIIFIDQLDALLGVYSTEVGGEARVRNQFLKEMDGLLDKSENYKVYVIGATN 174 Query: 149 YAHKLTPALLSRCTRFRFQPLP 170 +L A L R + + PLP Sbjct: 175 KPWRLDEAFLRRFQKRIYVPLP 196 >5E7P-A nrPDB Length = 745 Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 13/78 (16%) Query: 49 LLFYGPPGTGKTSTIVALAR----EIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTR 104 +L YGPPG GKT + ALA ++ S ++ + S ++ + + + +D A + Sbjct: 522 VLLYGPPGCGKTFVVRALASSGRLSVHAVKGSELMDKWVGSSEKAVRELFARARDSAPS- 580 Query: 105 QIFSKGFKLIILDEADAM 122 L+ LDE DA+ Sbjct: 581 --------LVFLDEIDAL 590 >3EIH-A nrPDB Length = 340 Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust. Identities = 38/158 (24%), Positives = 61/158 (38%), Gaps = 38/158 (24%) Query: 45 KLPHL-----------LFYGPPGTGKTSTIVALARE----IYGKNYSNMVLELNASDDRG 89 K PHL L YGPPGTGK+ A+A E + + S++V + ++ Sbjct: 57 KFPHLFKGNRKPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKL 116 Query: 90 IDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTN----AAQNALRRV----------IE 135 + + FA R+ +I +D+ DA+T A RR+ + Sbjct: 117 VKQL------FAMARE---NKPSIIFIDQVDALTGTRGEGESEASRRIKTELLVQMNGVG 167 Query: 136 RYTKNTRFCVLANYAHKLTPALLSRCTRFRFQPLPQEA 173 ++ N +L A+ R R + PLP A Sbjct: 168 NDSQGVLVLGATNIPWQLDSAIRRRFERRIYIPLPDLA 205 >3K1J-A nrPDB Length = 604 Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust. Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 3/68 (4%) Query: 21 PETL-DEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMV 79 PE L D+V GQ + ++ ++ + H+L G PGTGK+ A+A + + +++ Sbjct: 36 PEKLIDQVIGQEHAVEVIKTAANQKR--HVLLIGEPGTGKSMLGQAMAELLPTETLEDIL 93 Query: 80 LELNASDD 87 + N D+ Sbjct: 94 VFPNPEDE 101 >5XMK-A nrPDB Length = 437 Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust. Identities = 37/155 (23%), Positives = 60/155 (38%), Gaps = 38/155 (24%) Query: 45 KLPHL-----------LFYGPPGTGKTSTIVALARE----IYGKNYSNMVLELNASDDRG 89 K PHL L YGPPGTGK+ A+A E + + S++V + ++ Sbjct: 154 KFPHLFKGNRKPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKL 213 Query: 90 IDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTN----AAQNALRRV----------IE 135 + + FA R+ +I +D+ DA+T A RR+ + Sbjct: 214 VKQL------FAMARE---NKPSIIFIDQVDALTGTRGEGESEASRRIKTELLVQMNGVG 264 Query: 136 RYTKNTRFCVLANYAHKLTPALLSRCTRFRFQPLP 170 ++ N +L A+ R R + PLP Sbjct: 265 NDSQGVLVLGATNIPWQLDSAIRRRFERRIYIPLP 299 >5L3S-B nrPDB Length = 296 Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust. Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Query: 22 ETLDEVYGQNEVITTVRKFVDEGKLPH-LLFYGPPGTGKTSTIVALAREIYGKNYSNMV 79 +++ E+ +N+ + K GK P ++F+G G GKT+TI + + N S ++ Sbjct: 76 KSITEILTKNQKTDLIEKIRSSGKKPFVIIFFGVNGVGKTTTIAKVVNMLKKNNLSTII 134 >6MSD-E nrPDB Length = 403 Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust. Identities = 51/186 (27%), Positives = 77/186 (41%), Gaps = 37/186 (19%) Query: 50 LFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFAS-TRQIFS 108 L YGPPGTGKT LAR + + N + +++S +V I + A R++F+ Sbjct: 185 LLYGPPGTGKT----LLARAVASQLDCNFLKVVSSS------IVDKYIGESARLIREMFN 234 Query: 109 KGFK----LIILDEADAM--------TNAAQNALRRVIERYTKNTRFCVL--------AN 148 +I +DE DA+ T+A + R ++E + F L N Sbjct: 235 YARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATN 294 Query: 149 YAHKLTPALL--SRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNG--- 203 L PALL R R LP E I + K +A+++LS+G Sbjct: 295 RPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNG 354 Query: 204 -DMRRV 208 D+R V Sbjct: 355 ADLRNV 360 >5D4W-A nrPDB Length = 926 Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust. Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 8/70 (11%) Query: 27 VYGQNEVITTVRKFV--------DEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNM 78 V GQ E + +V + + + P LF GP GTGKT ALA ++ S + Sbjct: 600 VVGQKEAVQSVSNAIRLQRSGLSNPNQPPSFLFCGPSGTGKTLLTKALAEFLFDDPKSMI 659 Query: 79 VLELNASDDR 88 +++ +R Sbjct: 660 RFDMSEYQER 669 Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust. Identities = 16/51 (31%), Positives = 25/51 (49%) Query: 20 RPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREI 70 R +D V G+ E I V + + + + G PG GKT+ + LA+ I Sbjct: 190 REGKIDPVIGREEEIRRVIRILSRRTKNNPVLIGEPGVGKTTIVEGLAQRI 240 >4ZPX-A nrPDB Length = 413 Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust. Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 3/68 (4%) Query: 21 PETL-DEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMV 79 PE L D+V GQ + ++ ++ + H+L G PGTGK+ A+A + + +++ Sbjct: 36 PEKLIDQVIGQEHAVEVIKTAANQKR--HVLLIGEPGTGKSMLGQAMAELLPTETLEDIL 93 Query: 80 LELNASDD 87 + N D+ Sbjct: 94 VFPNPEDE 101 >2XSZ-A nrPDB Length = 367 Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust. Identities = 13/25 (52%), Positives = 19/25 (76%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGK 73 +L GPPGTGKT+ +A+A+E+ K Sbjct: 80 VLLAGPPGTGKTALALAIAQELGSK 104 >5W0T-A nrPDB Length = 304 Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust. Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 1/27 (3%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNY 75 +L YGPPG GKT ALA+E G N+ Sbjct: 80 VLLYGPPGCGKTMLAKALAKE-SGANF 105 >6QI8-A nrPDB Length = 456 Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust. Identities = 13/25 (52%), Positives = 19/25 (76%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGK 73 +L GPPGTGKT+ +A+A+E+ K Sbjct: 66 VLLAGPPGTGKTALALAIAQELGSK 90 >6EF3-H nrPDB Length = 467 Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 31/131 (23%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFAS-TRQIF 107 +L YGPPGTGKT AR + + + + + G ++V+ + + A R++F Sbjct: 246 ILLYGPPGTGKT----LCARAVANRTDATFIRVI------GSELVQKYVGEGARMVRELF 295 Query: 108 ----SKGFKLIILDEADAMTNA-------AQNALRR-VIERYTK--------NTRFCVLA 147 +K +I DE DA+ A N ++R ++E T+ N + Sbjct: 296 EMARTKKACIIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFAT 355 Query: 148 NYAHKLTPALL 158 N + L PALL Sbjct: 356 NRPNTLDPALL 366 >5VHF-B nrPDB Length = 340 Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust. Identities = 45/203 (22%), Positives = 82/203 (40%), Gaps = 48/203 (23%) Query: 16 VEKYRPETLDEVYGQNEVITTVRKFVDEGKLPH--------------LLFYGPPGTGKTS 61 VEK ET ++ G + I +++ V E L H ++ YGPPGTGKT Sbjct: 84 VEKAPQETYADIGGLDNQIQEIKESV-ELPLTHPEYYEEMGIKPPKGVILYGPPGTGKT- 141 Query: 62 TIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFAS-TRQIF----SKGFKLIIL 116 LA+ + + + + + G ++++ + D R++F ++ + Sbjct: 142 ---LLAKAVANQTSATFLRVV------GSELIQKYLGDGPKLVRELFRVAEEHAPSIVFI 192 Query: 117 DEADAM--------TNAAQNALRRVIERYTK--------NTRFCVLANYAHKLTPALL-- 158 DE DA+ + + R ++E + + + + N L PAL+ Sbjct: 193 DEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRP 252 Query: 159 SRCTRFRFQPLPQEAIERRIANV 181 R R PLP E ++RI + Sbjct: 253 GRIDRKIEFPLPDEKTKKRIFQI 275 >6MSK-B nrPDB Length = 440 Score = 32.0 bits (71), Expect = 0.36, Method: Compositional matrix adjust. Identities = 35/156 (22%), Positives = 64/156 (41%), Gaps = 33/156 (21%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFAS-TRQIF 107 ++ YGPPGTGKT A+A + + +V G ++++ + D R++F Sbjct: 222 VILYGPPGTGKTLLAKAVANQTSA-TFLRVV---------GSELIQKYLGDGPKLVRELF 271 Query: 108 ----SKGFKLIILDEADAM--------TNAAQNALRRVIERYTK--------NTRFCVLA 147 ++ +DE DA+ + + R ++E + + + + Sbjct: 272 RVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMAT 331 Query: 148 NYAHKLTPALL--SRCTRFRFQPLPQEAIERRIANV 181 N L PAL+ R R PLP E ++RI + Sbjct: 332 NRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQI 367 >5BQ5-A nrPDB Length = 189 Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust. Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 9/57 (15%) Query: 40 FVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYS-------NMVLELNASDDRG 89 F+D + ++LF GPPG GKT +++ E + Y ++V +L +D G Sbjct: 35 FIDRKE--NILFLGPPGIGKTHLAISIGMEAIARGYKTYFITAHDLVNQLRRADQEG 89 >5VFP-B nrPDB Length = 389 Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust. Identities = 35/156 (22%), Positives = 64/156 (41%), Gaps = 33/156 (21%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFAS-TRQIF 107 ++ YGPPGTGKT A+A + + +V G ++++ + D R++F Sbjct: 171 VILYGPPGTGKTLLAKAVANQTSA-TFLRVV---------GSELIQKYLGDGPKLVRELF 220 Query: 108 ----SKGFKLIILDEADAM--------TNAAQNALRRVIERYTK--------NTRFCVLA 147 ++ +DE DA+ + + R ++E + + + + Sbjct: 221 RVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMAT 280 Query: 148 NYAHKLTPALL--SRCTRFRFQPLPQEAIERRIANV 181 N L PAL+ R R PLP E ++RI + Sbjct: 281 NRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQI 316 >6MDP-A nrPDB Length = 768 Score = 32.0 bits (71), Expect = 0.40, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 28/90 (31%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDR---GIDVVRNQIKDF-ASTR 104 +L YGPPG GKT LAR+I GK LNA + + G +++ + + A+ R Sbjct: 280 ILLYGPPGCGKT----LLARQI-GKM-------LNAREPKVVNGPEILNKYVGESEANIR 327 Query: 105 QIFS------------KGFKLIILDEADAM 122 ++F+ G +II DE DA+ Sbjct: 328 KLFADAEEEQRRLGANSGLHIIIFDEIDAI 357 >6EM8-A nrPDB Length = 818 Score = 32.0 bits (71), Expect = 0.42, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 10/61 (16%) Query: 22 ETLDE-VYGQNEVITTVRKFVDEGK---------LPHLLFYGPPGTGKTSTIVALAREIY 71 +TL E V GQ + + ++ K V + + +F GP G GKT ALA ++ Sbjct: 504 DTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMF 563 Query: 72 G 72 G Sbjct: 564 G 564 Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust. Identities = 17/48 (35%), Positives = 26/48 (54%) Query: 23 TLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREI 70 TLD V G+++ IT V + + + + G PG GKT+ LA+ I Sbjct: 178 TLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAI 225 >5T0C-AD nrPDB Length = 418 Score = 32.0 bits (71), Expect = 0.44, Method: Compositional matrix adjust. Identities = 43/161 (26%), Positives = 62/161 (38%), Gaps = 26/161 (16%) Query: 49 LLFYGPPGTGKTSTIVALARE-------IYGKNYSNMVLELNASDDRGIDVVRN--QIKD 99 +L YGPPG GKT A+A + G + L G +VR+ ++ Sbjct: 202 VLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYL------GEGPRMVRDVFRLAK 255 Query: 100 FASTRQIFSKGFKLIILDEADAMTNAAQNALRRVIERYTK--------NTRFCVLANYAH 151 + IF I DA T A + R ++E + N + + N A Sbjct: 256 ENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRAD 315 Query: 152 KLTPALL--SRCTRFRFQPLPQEAIERRIANVLVHEKLKLS 190 L PALL R R PLP +R I + + K+ LS Sbjct: 316 TLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTIT-SKMNLS 355 >4XGU-A nrPDB Length = 424 Score = 31.6 bits (70), Expect = 0.46, Method: Compositional matrix adjust. Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 4/40 (10%) Query: 49 LLFYGPPGTGKTSTIVALAREI---YGKNYS-NMVLELNA 84 +L GPPGTGKTS LA+ + YS +++LE+N+ Sbjct: 175 ILLTGPPGTGKTSLCKGLAQHLSIRMNDKYSKSVMLEINS 214 >6EF0-H nrPDB Length = 257 Score = 31.6 bits (70), Expect = 0.47, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 31/131 (23%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFAS-TRQIF 107 +L YGPPGTGKT AR + + + + + G ++V+ + + A R++F Sbjct: 46 ILLYGPPGTGKT----LCARAVANRTDATFIRVI------GSELVQKYVGEGARMVRELF 95 Query: 108 ----SKGFKLIILDEADAMTNA-------AQNALRR-VIERYTK--------NTRFCVLA 147 +K +I DE DA+ A N ++R ++E T+ N + Sbjct: 96 EMARTKKACIIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFAT 155 Query: 148 NYAHKLTPALL 158 N + L PALL Sbjct: 156 NRPNTLDPALL 166 >6NYV-B nrPDB Length = 314 Score = 31.6 bits (70), Expect = 0.55, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 71/174 (40%), Gaps = 26/174 (14%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGK--NYSNMVLELNASDDRGIDVVRNQIKDFASTRQI 106 LL +GPPG GKT A+A E N S L D G +VR FA R + Sbjct: 75 LLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGD-GEKLVRAL---FAVARHM 130 Query: 107 FSKGFKLIILDEAD----AMTNAAQNALRRVIERY----------TKNTRFCVLA--NYA 150 +I +DE D +++ A RR+ + R VLA N Sbjct: 131 QP---SIIFIDEVDSLLSERSSSEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRP 187 Query: 151 HKLTPALLSRCTRFRFQPLPQEAIERRIANVLVHEK-LKLSPNAEKALIELSNG 203 +L A L R T+ + LP E + N L+ ++ L A + L ++++G Sbjct: 188 QELDEAALRRFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITDG 241 >5VHN-D nrPDB Length = 262 Score = 31.6 bits (70), Expect = 0.55, Method: Compositional matrix adjust. Identities = 43/159 (27%), Positives = 61/159 (38%), Gaps = 22/159 (13%) Query: 49 LLFYGPPGTGKTSTIVALARE-------IYGKNYSNMVLELNASDDRGIDVVRNQIKDFA 101 +L YGPPG GKT A+A + G + L R DV R ++ Sbjct: 58 VLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVR--DVFRLAKENAP 115 Query: 102 STRQIFSKGFKLIILDEADAMTNAAQNALRRVIERYTK--------NTRFCVLANYAHKL 153 + IF I DA T A + R ++E + N + + N A L Sbjct: 116 AI--IFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTL 173 Query: 154 TPALL--SRCTRFRFQPLPQEAIERRIANVLVHEKLKLS 190 PALL R R PLP ++R+ + K+ LS Sbjct: 174 DPALLRPGRLDRKIEFPLPDRR-QKRLIFSTITSKMNLS 211 >3PXI-A nrPDB Length = 758 Score = 31.6 bits (70), Expect = 0.56, Method: Compositional matrix adjust. Identities = 13/35 (37%), Positives = 20/35 (57%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELN 83 +F GP G GKT ALA I+G S + ++++ Sbjct: 524 FIFLGPTGVGKTELARALAESIFGDEESMIRIDMS 558 Score = 27.7 bits (60), Expect = 8.4, Method: Compositional matrix adjust. Identities = 15/51 (29%), Positives = 28/51 (54%) Query: 20 RPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREI 70 + ++LD V G+++ I V + + + + G PG GKT+ LA++I Sbjct: 175 KEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQI 225 >5VHO-B nrPDB Length = 267 Score = 31.6 bits (70), Expect = 0.57, Method: Compositional matrix adjust. Identities = 36/156 (23%), Positives = 63/156 (40%), Gaps = 33/156 (21%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFAS-TRQIF 107 ++ YGPPGTGKT A+A + + +V G ++++ + D R++F Sbjct: 56 VILYGPPGTGKTLLAKAVANQTSA-TFLRVV---------GSELIQKYLGDGPKLVRELF 105 Query: 108 ----SKGFKLIILDEADAMTNA---AQNALRRVIERYT-------------KNTRFCVLA 147 ++ +DE DA+ + + R I+R + + + Sbjct: 106 RVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMAT 165 Query: 148 NYAHKLTPALL--SRCTRFRFQPLPQEAIERRIANV 181 N L PAL+ R R PLP E ++RI + Sbjct: 166 NRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQI 201 >3TK1-A nrPDB Length = 330 Score = 31.6 bits (70), Expect = 0.58, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 25/47 (53%) Query: 42 DEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDR 88 D G+ H+ G PG GK+++I AL + + + VL ++ S R Sbjct: 52 DAGRAMHVGITGVPGVGKSTSIEALGMHLIEQGHRVAVLAVDPSSVR 98 >5VHO-A nrPDB Length = 267 Score = 31.2 bits (69), Expect = 0.60, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 17/94 (18%) Query: 39 KFVDEGKLP--HLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQ 96 +FV+ G P +L +GPPGTGKT AR + + + + + G ++V+ Sbjct: 43 RFVNLGIEPPKGVLLFGPPGTGKT----LCARAVANRTDACFIRVI------GSELVQKY 92 Query: 97 IKDFAS-TRQIF----SKGFKLIILDEADAMTNA 125 + + A R++F +K LI DE DA+ A Sbjct: 93 VGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 126 >3HU1-A nrPDB Length = 489 Score = 31.2 bits (69), Expect = 0.60, Method: Compositional matrix adjust. Identities = 13/21 (61%), Positives = 15/21 (71%) Query: 49 LLFYGPPGTGKTSTIVALARE 69 +L YGPPGTGKT A+A E Sbjct: 241 ILLYGPPGTGKTLIARAVANE 261 >2QZ4-A nrPDB Length = 262 Score = 31.2 bits (69), Expect = 0.64, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 12/59 (20%) Query: 23 TLDEVYGQNEVITTVRKFVDEGKLPH------------LLFYGPPGTGKTSTIVALARE 69 + +V G +E VR+FVD K P L GPPG GKT A+A E Sbjct: 4 SFKDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATE 62 >5VFU-A nrPDB Length = 361 Score = 31.2 bits (69), Expect = 0.65, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 17/94 (18%) Query: 39 KFVDEGKLP--HLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQ 96 +FV+ G P +L +GPPGTGKT AR + + + + + G ++V+ Sbjct: 128 RFVNLGIEPPKGVLLFGPPGTGKT----LCARAVANRTDACFIRVI------GSELVQKY 177 Query: 97 IKDFAS-TRQIF----SKGFKLIILDEADAMTNA 125 + + A R++F +K LI DE DA+ A Sbjct: 178 VGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 211 >3J3U-A nrPDB Length = 810 Score = 31.2 bits (69), Expect = 0.65, Method: Compositional matrix adjust. Identities = 13/35 (37%), Positives = 20/35 (57%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELN 83 +F GP G GKT ALA I+G S + ++++ Sbjct: 541 FIFLGPTGVGKTELARALAESIFGDEESMIRIDMS 575 Score = 27.3 bits (59), Expect = 9.3, Method: Compositional matrix adjust. Identities = 15/51 (29%), Positives = 28/51 (54%) Query: 20 RPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREI 70 + ++LD V G+++ I V + + + + G PG GKT+ LA++I Sbjct: 175 KEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQI 225 >6EMW-B nrPDB Length = 225 Score = 31.2 bits (69), Expect = 0.71, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 10/63 (15%) Query: 22 ETLDE-VYGQNEVITTVRKFVDEGK---------LPHLLFYGPPGTGKTSTIVALAREIY 71 +TL E V GQ + + ++ K V + + +F GP G GKT ALA ++ Sbjct: 17 DTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMF 76 Query: 72 GKN 74 G + Sbjct: 77 GDD 79 >4B3F-X nrPDB Length = 646 Score = 31.2 bits (69), Expect = 0.75, Method: Compositional matrix adjust. Identities = 10/15 (66%), Positives = 14/15 (93%) Query: 50 LFYGPPGTGKTSTIV 64 + +GPPGTGKT+T+V Sbjct: 209 IIHGPPGTGKTTTVV 223 >6EPC-H nrPDB Length = 433 Score = 30.8 bits (68), Expect = 0.78, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 17/94 (18%) Query: 39 KFVDEGKLP--HLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQ 96 +FV+ G P +L +GPPGTGKT AR + + + + + G ++V+ Sbjct: 200 RFVNLGIEPPKGVLLFGPPGTGKT----LCARAVANRTDACFIPVI------GSELVQKY 249 Query: 97 IKDFAS-TRQIF----SKGFKLIILDEADAMTNA 125 + + A R++F +K LI DE DA+ A Sbjct: 250 VGEGARMVRELFEMARTKKACLIFFDEIDAIGGA 283 >3ZTV-A nrPDB Length = 579 Score = 30.8 bits (68), Expect = 0.79, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 3/69 (4%) Query: 165 RFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKA-TLDNPD 223 +F P +I R+I +VL+ N+E EL+ + ++ L+ L+S K+ +LD D Sbjct: 277 KFSPEGIASITRKIPHVLMSSHKLQVKNSEGKWAELTGDERKKALDTLKSMKSISLD--D 334 Query: 224 EDEISDDVI 232 D +D +I Sbjct: 335 HDAKTDKLI 343 >3JCO-J nrPDB Length = 405 Score = 30.8 bits (68), Expect = 0.90, Method: Compositional matrix adjust. Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 13/69 (18%) Query: 12 NLPWVEKYRPETLDEVYGQNEVITTVRKFVD-EGKLPHL------------LFYGPPGTG 58 +L VEK T D V G + I +++ ++ K P L + YGPPGTG Sbjct: 135 SLMMVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTG 194 Query: 59 KTSTIVALA 67 KT A+A Sbjct: 195 KTLLARAVA 203 >5VY8-A nrPDB Length = 908 Score = 30.8 bits (68), Expect = 0.96, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 2/70 (2%) Query: 2 STSTEKRSKENLPWVEKYRPETLDEVYGQNEVI-TTVRKFVDEGKLPHLLFYGPPGTGKT 60 +T E SK + E+ R LD V G+ E I +T+R K L G PG GKT Sbjct: 161 NTPLEYLSKYAIDMTEQARQGKLDPVIGREEEIRSTIRVLARRIKSNPCLI-GEPGIGKT 219 Query: 61 STIVALAREI 70 + I +A+ I Sbjct: 220 AIIEGVAQRI 229 >3M6A-A nrPDB Length = 543 Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 7/93 (7%) Query: 37 VRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQ 96 V+K K P L GPPG GKTS ++A+ + G+ + + L D+ I R Sbjct: 99 VQKLTKSLKGPILCLAGPPGVGKTSLAKSIAKSL-GRKFVRISLG-GVRDESEIRGHRRT 156 Query: 97 IKDFASTR--QIFSKGFKL---IILDEADAMTN 124 R Q K KL +LDE D M++ Sbjct: 157 YVGAMPGRIIQGMKKAGKLNPVFLLDEIDKMSS 189 >4YPN-A nrPDB Length = 293 Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust. Identities = 13/26 (50%), Positives = 17/26 (65%) Query: 45 KLPHLLFYGPPGTGKTSTIVALAREI 70 K P L+ GPPG GKTS ++AR + Sbjct: 142 KAPILVLVGPPGVGKTSLGRSIARSM 167 >5JVF-A nrPDB Length = 285 Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust. Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 2/39 (5%) Query: 113 LIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAH 151 L++ DE ++T+A AL +++ R TRF VLAN AH Sbjct: 153 LVVCDEPTSITDA--YALIKLLNRDHGMTRFRVLANMAH 189 >6CS8-A nrPDB Length = 303 Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust. Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Query: 43 EGKLPH-LLFYGPPGTGKTSTIVALAREIYGKNYSNMV 79 EGK P +L G G GKT+TI LAR+ + S M+ Sbjct: 95 EGKAPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVML 132 >6AMN-A nrPDB Length = 349 Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 2/70 (2%) Query: 2 STSTEKRSKENLPWVEKYRPETLDEVYGQNEVI-TTVRKFVDEGKLPHLLFYGPPGTGKT 60 +T E SK + E+ R LD V G+ E I +T+R K L G PG GKT Sbjct: 158 NTPLEYLSKYAIDMTEQARQGKLDPVIGREEEIRSTIRVLARRIKSNPCLI-GEPGIGKT 216 Query: 61 STIVALAREI 70 + I +A+ I Sbjct: 217 AIIEGVAQRI 226 >5GAD-l nrPDB Length = 497 Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust. Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Query: 43 EGKLPH-LLFYGPPGTGKTSTIVALAREIYGKNYSNMV 79 EGK P +L G G GKT+TI LAR+ + S M+ Sbjct: 289 EGKAPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVML 326 >3TQO-A nrPDB Length = 462 Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust. Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 4/52 (7%) Query: 1 MSTSTEKRSKENLPWVEKYRPETLDEVY---GQN-EVITTVRKFVDEGKLPH 48 +S E R+ + +P + K + LD Y GQN +V VR+F D GKL H Sbjct: 109 LSPDQEPRATQYVPEIIKLIQKLLDNQYAYTGQNGDVFFDVRRFKDYGKLSH 160 >3NXS-A nrPDB Length = 329 Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 23/47 (48%) Query: 42 DEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDR 88 + G H+ G PG GK++TI AL + + VL ++ S R Sbjct: 53 EAGSAMHVGITGVPGVGKSTTIEALGMHLIEAGHRVAVLAVDPSSTR 99 >4XGC-A nrPDB Length = 393 Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust. Identities = 50/218 (22%), Positives = 88/218 (40%), Gaps = 46/218 (21%) Query: 53 GPPGTGKTSTIVALAREIYGKNYSNMV-----LELNA---SDDRGIDV-----VRNQIKD 99 G PGTGKT+T+ + R + N + LE+N ++ R V + + Sbjct: 67 GVPGTGKTATVTGVIRTLQRMAKQNELPAFEYLEINGMRLTEPRQAYVQIYKQLTGKTVS 126 Query: 100 FASTRQIFSKGFK---------LIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYA 150 + + K F ++++DE D + N Q+ + +++ TK+ V+ A Sbjct: 127 WEQAHALLEKRFTTPAPRRVTTVLLVDELDILCNRRQDVVYNLLDWPTKSAAKLVVVTIA 186 Query: 151 HK-------LTPALLSR--CTRFRFQPLP----QEAIERRIANVLVHEKLKLSPNAEKAL 197 + L + SR TR FQP QE + R+ + + A K Sbjct: 187 NTMDLPERLLMGKVTSRLGLTRLTFQPYSHKQLQEIVTARLGGSETFKGEAVQLVARK-- 244 Query: 198 IELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYEC 235 + +GD RR L++ + +AT EI+D +C Sbjct: 245 VAAVSGDARRALDICR--RAT-------EIADTAAVKC 273 >2CE7-A nrPDB Length = 476 Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust. Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 24/94 (25%) Query: 19 YRPE-----TLDEVYGQNEVITTVRKFVDEGKLPH------------LLFYGPPGTGKTS 61 Y+P T +V G E I +++ V+ K P +L GPPGTGKT Sbjct: 5 YKPSGNKRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTL 64 Query: 62 TIVALARE-------IYGKNYSNMVLELNASDDR 88 A+A E I G ++ + + + A+ R Sbjct: 65 LARAVAGEANVPFFHISGSDFVELFVGVGAARVR 98 >6D00-1 nrPDB Length = 883 Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 24/47 (51%) Query: 24 LDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREI 70 LD V G++E+I+ V + + + G PG GKT+ LA I Sbjct: 177 LDPVIGRDEIISRVIRVLSRRTKNNPCLVGEPGVGKTAIAEGLANRI 223 Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust. Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 16/115 (13%) Query: 73 KNYSNMVLEL----NASDDRGIDVVRNQIKDFASTRQIFSK--GFKLIILDEADAMTNAA 126 K+ SN++L++ + +D +G V DF +T + + G L LDE D ++ A Sbjct: 686 KDVSNLLLQILDDGHCTDSKGRRV------DFKNTIIVMTSNLGADLFELDEGDKVSQAT 739 Query: 127 QNALRRVIERYTKN---TRFCVLANYAHKLTPALLSRCTRFRFQPLPQEAIERRI 178 +NA+ R+ N R L + ++LTP+ + + R + + + E++I Sbjct: 740 KNAVLATARRHFANEFINRIDELIVF-NRLTPSNIRKIVDVRLKEVQERLDEKQI 793 Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust. Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 12/74 (16%) Query: 3 TSTEKRSKENLPWVEKYRPETLDEVYGQNEVITTVRKFVDEGK---------LPHLLFYG 53 ++ ++ KE L +E+Y + V GQ+E I + + + L LF G Sbjct: 551 SNLQRSEKEKLLHMEEYMKQ---HVVGQDEAIKAICDAIRLSRTGLQNRNRPLASFLFLG 607 Query: 54 PPGTGKTSTIVALA 67 P G GKT + LA Sbjct: 608 PTGCGKTLCVKELA 621 >4YPL-A nrPDB Length = 555 Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust. Identities = 13/26 (50%), Positives = 17/26 (65%) Query: 45 KLPHLLFYGPPGTGKTSTIVALAREI 70 K P L+ GPPG GKTS ++AR + Sbjct: 109 KAPILVLVGPPGVGKTSLGRSIARSM 134 >5GJQ-J nrPDB Length = 406 Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust. Identities = 12/19 (63%), Positives = 14/19 (73%) Query: 49 LLFYGPPGTGKTSTIVALA 67 +L YGPPGTGKT A+A Sbjct: 186 VLLYGPPGTGKTLLARAVA 204 >2ZAO-A nrPDB Length = 444 Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust. Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 11/36 (30%) Query: 45 KLPHL-----------LFYGPPGTGKTSTIVALARE 69 K PHL L +GPPGTGK+ A+A E Sbjct: 155 KFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATE 190 >5M32-h nrPDB Length = 355 Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 13/69 (18%) Query: 12 NLPWVEKYRPETLDEVYGQNEVITTVRKFVD-EGKLPHL------------LFYGPPGTG 58 +L VEK T + + G ++ I +++ ++ K P L L YGPPGTG Sbjct: 99 SLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTG 158 Query: 59 KTSTIVALA 67 KT A+A Sbjct: 159 KTLLARAVA 167 >5VHP-C nrPDB Length = 266 Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 13/69 (18%) Query: 12 NLPWVEKYRPETLDEVYGQNEVITTVRKFVD-EGKLPHL------------LFYGPPGTG 58 +L VEK T + + G ++ I +++ ++ K P L L YGPPGTG Sbjct: 7 SLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTG 66 Query: 59 KTSTIVALA 67 KT A+A Sbjct: 67 KTLLARAVA 75 >5OFO-C nrPDB Length = 871 Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust. Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 9/54 (16%) Query: 27 VYGQNEVITTVRKFVDEGK---------LPHLLFYGPPGTGKTSTIVALAREIY 71 V GQNE + V + + + LF GP G GKT ALA ++ Sbjct: 574 VIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMF 627 Score = 28.1 bits (61), Expect = 5.3, Method: Compositional matrix adjust. Identities = 17/61 (27%), Positives = 28/61 (45%) Query: 10 KENLPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALARE 69 K + E+ LD V G++E I + + + + G PG GKT+ + LA+ Sbjct: 167 KYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQR 226 Query: 70 I 70 I Sbjct: 227 I 227 >4Z8X-A nrPDB Length = 497 Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 67/175 (38%), Gaps = 47/175 (26%) Query: 44 GKLPH-LLFYGPPGTGKTSTIVALARE-------IYGKNYSNMVLELNASDDRGIDVVRN 95 G+ P +L YG PG GKT A+A E + G ++ M + + A Sbjct: 48 GRPPKGVLLYGEPGVGKTLLAKAIAGEAHVPFISVSGSDFVEMFVGVGA----------- 96 Query: 96 QIKDFASTRQIFSKGFK----LIILDEADAMTNA---------------AQNALRRVIER 136 A R +F K +I +DE DA+ A N L ++ Sbjct: 97 -----ARVRDLFETAKKHAPCMIFIDEIDAVGRARGAIPVGGGHDEREQTLNQLLVEMDG 151 Query: 137 YTKNTRFCVLA--NYAHKLTPALLSRCTRFRFQP-LPQEAIERRIANVLVHEKLK 188 + + V+A N L PALL R RF Q +P+ + R + VH + K Sbjct: 152 FDTSDGIIVIAATNRPDILDPALL-RPGRFDRQIFIPKPDVRGRYEILKVHARNK 205 >5Z6Q-A nrPDB Length = 392 Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust. Identities = 43/169 (25%), Positives = 70/169 (41%), Gaps = 24/169 (14%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASD-DRGIDVVRNQIKDFASTRQIF 107 LL +GPPG GKT A+A E ++ L + G +VR FA R++ Sbjct: 154 LLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRAL---FAVARELQ 210 Query: 108 SKGFKLIILDEADAM----TNAAQNALRRVIERY---------TKNTRFCVLA--NYAHK 152 +I +DE D++ +A RR+ + + R V+ N + Sbjct: 211 P---SIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQE 267 Query: 153 LTPALLSRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELS 201 L A+L R + + LP E E R+ + + SP +K L +L+ Sbjct: 268 LDEAVLRRFIKRVYVSLPNE--ETRLLLLKNLLCKQGSPLTQKELAQLA 314 >1J2R-A nrPDB Length = 199 Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust. Identities = 24/102 (23%), Positives = 47/102 (46%), Gaps = 11/102 (10%) Query: 46 LPHLLFYGPPGTGKTSTIVALAREIYGKNY-SNMVLELNASDDRGIDVV-----RNQIKD 99 LP + P G T + + + + +G Y +++ L+L RGID + I Sbjct: 90 LPENWWQHPAALGTTDSDIEIIKRQWGAFYGTDLELQLR---RRGIDTIVLCGISTNIGV 146 Query: 100 FASTRQIFSKGFKLIILDEADAMTNAAQ--NALRRVIERYTK 139 ++ R + GF L+I ++A + +A Q N++ + R + Sbjct: 147 ESTARNAWELGFNLVIAEDACSAASAEQHNNSINHIYPRIAR 188 >4CIU-A nrPDB Length = 727 Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust. Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 9/66 (13%) Query: 27 VYGQNEVITTVRKFVDEGK---------LPHLLFYGPPGTGKTSTIVALAREIYGKNYSN 77 V GQNE + V + + + LF GP G GKT ALA ++ + + Sbjct: 428 VIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAM 487 Query: 78 MVLELN 83 + ++++ Sbjct: 488 VRIDMS 493 Score = 27.7 bits (60), Expect = 7.2, Method: Compositional matrix adjust. Identities = 17/61 (27%), Positives = 28/61 (45%) Query: 10 KENLPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALARE 69 K + E+ LD V G++E I + + + + G PG GKT+ + LA+ Sbjct: 21 KYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQR 80 Query: 70 I 70 I Sbjct: 81 I 81 >5A0R-A nrPDB Length = 198 Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 28/55 (50%) Query: 55 PGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSK 109 PG G ++ + + GK + + LEL+A+ +V N I A +QIF+K Sbjct: 92 PGLGGSTVALRIGFSNKGKGHDAINLELHATAHAIDHIVLNDISKSAQFKQIFAK 146 >6EMW-E nrPDB Length = 181 Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust. Identities = 17/48 (35%), Positives = 26/48 (54%) Query: 23 TLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREI 70 TLD V G+++ IT V + + + + G PG GKT+ LA+ I Sbjct: 17 TLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAI 64 >1XWI-A nrPDB Length = 322 Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust. Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 11/36 (30%) Query: 45 KLPHL-----------LFYGPPGTGKTSTIVALARE 69 K PHL L +GPPGTGK+ A+A E Sbjct: 33 KFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATE 68 >6B5C-A nrPDB Length = 307 Score = 28.9 bits (63), Expect = 3.8, Method: Compositional matrix adjust. Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRG 89 +L GPPGTGKT A+A E G + N+ S RG Sbjct: 61 VLMVGPPGTGKTMLAKAVATEC-GTTFFNVSSSTLTSKYRG 100 >3J15-B nrPDB Length = 593 Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 6/54 (11%) Query: 21 PETLDE----VYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREI 70 PE LDE YG N + V +G + ++ GP GTGKT+ + LA ++ Sbjct: 76 PEQLDEDCVHRYGVNAFVLYRLPIVKDGMVVGIV--GPNGTGKTTAVKILAGQL 127 >2YIB-D nrPDB Length = 770 Score = 28.5 bits (62), Expect = 4.3, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 6/48 (12%) Query: 222 PDEDEISDDVIYECCGAPRPSDLKAVLKSILEDDWGTAHYTLNKVRSA 269 PD DE+ GAP + LK + +LE+D+ T TL +VR A Sbjct: 112 PDHDEVG------TFGAPDITLLKQLTFFLLENDFPTGPETLRQVREA 153 >2YIB-A nrPDB Length = 853 Score = 28.5 bits (62), Expect = 4.6, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 6/48 (12%) Query: 222 PDEDEISDDVIYECCGAPRPSDLKAVLKSILEDDWGTAHYTLNKVRSA 269 PD DE+ GAP + LK + +LE+D+ T TL +VR A Sbjct: 112 PDHDEVG------TFGAPDITLLKQLTFFLLENDFPTGPETLRQVREA 153 >6EF2-J nrPDB Length = 262 Score = 28.1 bits (61), Expect = 5.2, Method: Compositional matrix adjust. Identities = 11/19 (57%), Positives = 14/19 (73%) Query: 49 LLFYGPPGTGKTSTIVALA 67 ++ YGPPGTGKT A+A Sbjct: 42 VILYGPPGTGKTLLARAVA 60 >4WRT-C nrPDB Length = 798 Score = 28.1 bits (61), Expect = 5.4, Method: Compositional matrix adjust. Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 7/39 (17%) Query: 67 AREIYGKNYSNMVLELNASDD--RGIDVVRNQIKDFAST 103 A E++G N S +NASD +G+ V RN I DF+ST Sbjct: 468 ASELHGINES-----MNASDYTLKGVVVTRNVIDDFSST 501 >2IUT-A nrPDB Length = 574 Score = 28.1 bits (61), Expect = 5.6, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 6/54 (11%) Query: 21 PETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKN 74 P L G +IT D K+PHLL G G+GK+ + A+ I K+ Sbjct: 195 PLALGHDIGGRPIIT------DLAKMPHLLVAGTTGSGKSVGVNAMLLSILFKS 242 >4HSE-A nrPDB Length = 397 Score = 28.1 bits (61), Expect = 5.7, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 25/47 (53%) Query: 24 LDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREI 70 LD V G++E I V + + + + G PG GKT+ + LA+ I Sbjct: 32 LDPVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRI 78 >4YER-A nrPDB Length = 328 Score = 28.1 bits (61), Expect = 6.3, Method: Compositional matrix adjust. Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Query: 22 ETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVAL 66 E L + +G E + V V +G++ F GP G GKT+TI L Sbjct: 9 ENLVKKFGDFEAVKGVSFSVKKGEI--FAFLGPNGAGKTTTIHML 51 >3PXG-A nrPDB Length = 468 Score = 28.1 bits (61), Expect = 6.4, Method: Compositional matrix adjust. Identities = 15/51 (29%), Positives = 28/51 (54%) Query: 20 RPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREI 70 + ++LD V G+++ I V + + + + G PG GKT+ LA++I Sbjct: 175 KEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQI 225 >2IUU-A nrPDB Length = 491 Score = 28.1 bits (61), Expect = 6.4, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 6/54 (11%) Query: 21 PETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKN 74 P L G +IT D K+PHLL G G+GK+ + A+ I K+ Sbjct: 195 PLALGHDIGGRPIIT------DLAKMPHLLVAGTTGSGKSVGVNAMLLSILFKS 242 >6EUX-A nrPDB Length = 292 Score = 28.1 bits (61), Expect = 6.4, Method: Compositional matrix adjust. Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 7/39 (17%) Query: 67 AREIYGKNYSNMVLELNASDD--RGIDVVRNQIKDFAST 103 A E++G N S +NASD +G+ V RN I DF+ST Sbjct: 211 ASELHGINES-----MNASDYTLKGVVVTRNVIDDFSST 244 >5WWP-B nrPDB Length = 600 Score = 27.7 bits (60), Expect = 6.7, Method: Compositional matrix adjust. Identities = 13/36 (36%), Positives = 18/36 (50%) Query: 32 EVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALA 67 E + V F G ++ GPPGTGK+ + LA Sbjct: 263 EFASHVANFQKSGYSKYVTVQGPPGTGKSHFAIGLA 298 >6MAT-A nrPDB Length = 813 Score = 27.7 bits (60), Expect = 6.9, Method: Compositional matrix adjust. Identities = 11/21 (52%), Positives = 14/21 (66%) Query: 49 LLFYGPPGTGKTSTIVALARE 69 +L +GPPG GKT A+A E Sbjct: 538 ILLWGPPGCGKTLVAKAVANE 558 >6E11-1 nrPDB Length = 906 Score = 27.7 bits (60), Expect = 7.4, Method: Compositional matrix adjust. Identities = 17/54 (31%), Positives = 26/54 (48%) Query: 17 EKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREI 70 EK R L +YG++E I + + + + G PGTGKT+ + L I Sbjct: 199 EKVRNGKLQGIYGRDEEIRAIIESLLRYNKNSPVLVGNPGTGKTTIVEGLVYRI 252 >5KWA-A nrPDB Length = 497 Score = 27.7 bits (60), Expect = 8.0, Method: Compositional matrix adjust. Identities = 12/25 (48%), Positives = 15/25 (60%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGK 73 +L YGPPG GKT A+A + K Sbjct: 184 VLLYGPPGCGKTLIAKAVANSLAKK 208 >1QVR-A nrPDB Length = 854 Score = 27.7 bits (60), Expect = 8.0, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 25/47 (53%) Query: 24 LDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREI 70 LD V G++E I V + + + + G PG GKT+ + LA+ I Sbjct: 169 LDPVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRI 215 >1JBK-A nrPDB Length = 195 Score = 27.3 bits (59), Expect = 8.6, Method: Compositional matrix adjust. Identities = 17/61 (27%), Positives = 28/61 (45%) Query: 10 KENLPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALARE 69 K + E+ LD V G++E I + + + + G PG GKT+ + LA+ Sbjct: 7 KYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQR 66 Query: 70 I 70 I Sbjct: 67 I 67 >5HE8-A nrPDB Length = 174 Score = 27.3 bits (59), Expect = 8.8, Method: Compositional matrix adjust. Identities = 12/34 (35%), Positives = 20/34 (58%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLEL 82 L YGP GTGK+ + A+A ++ K + ++ L Sbjct: 28 LYLYGPFGTGKSFILGAIANQLKSKKVRSTIIYL 61 >2YYZ-A nrPDB Length = 359 Score = 27.3 bits (59), Expect = 9.1, Method: Compositional matrix adjust. Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 2/44 (4%) Query: 24 LDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALA 67 L + +G+ + + V V +G+ LL GP G GKT+T++ LA Sbjct: 9 LKKYFGKVKAVDGVSFEVKDGEFVALL--GPSGCGKTTTLLMLA 50 >3MD0-A nrPDB Length = 355 Score = 27.3 bits (59), Expect = 9.6, Method: Compositional matrix adjust. Identities = 14/47 (29%), Positives = 22/47 (46%) Query: 42 DEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDR 88 D G + G PG GK++ I AL + + + VL ++ S R Sbjct: 75 DSGNAHRVGITGVPGVGKSTAIEALGMHLIERGHRVAVLAVDPSSTR 121 >4LPS-A nrPDB Length = 242 Score = 27.3 bits (59), Expect = 9.7, Method: Compositional matrix adjust. Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 6/92 (6%) Query: 7 KRSKENLPWVEKYRPETLDEVYGQNEVITTVRK--FVDEGKLPHLLFYGPPGTGKTSTIV 64 + S +N P + K + ++++ +N++ K ++ EG L L F PG+GKT+ + Sbjct: 6 QESLQNNPNLSKKDVKIVEKILSKNDIKAAEMKERYLKEG-LYVLNFMSSPGSGKTTMLE 64 Query: 65 ALAREIYGKNYSNMVLELNASDDRGIDVVRNQ 96 LA K++ V+E + +R D +R + Sbjct: 65 NLAD---FKDFKFCVVEGDLQTNRDADRLRKK 93 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1SXJ-C nrPDB 472 e-133 2CHV-A nrPDB 372 e-103 1IQP-A nrPDB 354 3e-98 1SXJ-B nrPDB 335 1e-92 1SXJ-D nrPDB 321 2e-88 2CHG-A nrPDB 284 5e-77 1SXJ-A nrPDB 204 4e-53 1SXJ-E nrPDB 190 8e-49 3GLF-B nrPDB 189 2e-48 3U5Z-B nrPDB 188 4e-48 3PVS-A nrPDB 186 1e-47 1NJG-A nrPDB 185 3e-47 5C18-A nrPDB 125 3e-29 6MCK-A nrPDB 114 4e-26 3CF0-A nrPDB 114 5e-26 6EF1-K nrPDB 108 3e-24 5WVI-K nrPDB 107 5e-24 6CHS-H nrPDB 107 6e-24 5EQT-A nrPDB 107 7e-24 5VHO-F nrPDB 103 1e-22 5VFP-F nrPDB 102 3e-22 6EPD-M nrPDB 101 4e-22 1HQC-A nrPDB 95 5e-20 Sequences not found previously or not previously below threshold: 3WHK-A nrPDB 100 1e-21 5VHN-D nrPDB 98 4e-21 5T0C-AD nrPDB 97 1e-20 6MSK-B nrPDB 94 8e-20 5VHF-B nrPDB 94 1e-19 5VFP-B nrPDB 93 1e-19 3H4M-A nrPDB 93 2e-19 5VHO-B nrPDB 93 2e-19 5VC7-A nrPDB 91 9e-19 6EF2-J nrPDB 90 2e-18 3JCO-J nrPDB 89 2e-18 5G4G-A nrPDB 89 2e-18 5VHP-C nrPDB 89 2e-18 5M32-h nrPDB 89 3e-18 5VHP-E nrPDB 88 5e-18 5GJQ-J nrPDB 88 5e-18 6EF0-L nrPDB 88 6e-18 6HE4-H nrPDB 88 7e-18 6HE9-H nrPDB 87 1e-17 6EF0-M nrPDB 86 2e-17 6MSD-E nrPDB 86 2e-17 5WVI-L nrPDB 85 5e-17 6FVU-L nrPDB 84 6e-17 5VFU-A nrPDB 84 1e-16 5VHO-A nrPDB 83 1e-16 5A5B-M nrPDB 83 1e-16 1IN6-A nrPDB 83 3e-16 6EPC-H nrPDB 82 3e-16 4D81-A nrPDB 82 3e-16 2X8A-A nrPDB 81 8e-16 4LCB-A nrPDB 80 1e-15 6EF0-H nrPDB 79 4e-15 1LV7-A nrPDB 78 4e-15 6EF3-H nrPDB 78 6e-15 2CE7-A nrPDB 78 7e-15 3D8B-A nrPDB 75 4e-14 3JCP-I nrPDB 75 5e-14 6FVU-I nrPDB 74 9e-14 4Z8X-A nrPDB 74 1e-13 6EF1-I nrPDB 73 2e-13 6AP1-A nrPDB 73 2e-13 5Z6Q-A nrPDB 73 3e-13 3HU1-A nrPDB 72 3e-13 6B5C-A nrPDB 72 3e-13 4LGM-A nrPDB 72 4e-13 2R65-A nrPDB 72 4e-13 3EIH-A nrPDB 70 1e-12 6B5D-A nrPDB 70 1e-12 6NYV-B nrPDB 70 2e-12 5E7P-A nrPDB 69 2e-12 5XMK-A nrPDB 69 3e-12 5ZQM-A nrPDB 68 4e-12 5UBV-A nrPDB 68 5e-12 6MDP-A nrPDB 68 5e-12 1IY1-A nrPDB 68 6e-12 5WC0-A nrPDB 68 7e-12 3PFI-A nrPDB 68 8e-12 2DHR-A nrPDB 67 1e-11 6AZ0-A nrPDB 66 3e-11 1XWI-A nrPDB 65 5e-11 5W0T-A nrPDB 64 6e-11 4L16-A nrPDB 64 7e-11 6MAT-A nrPDB 64 8e-11 2QZ4-A nrPDB 64 9e-11 5KWA-A nrPDB 63 1e-10 2ZAO-A nrPDB 63 2e-10 6BLB-A nrPDB 61 5e-10 5VQ9-D nrPDB 56 2e-08 2XSZ-D nrPDB 55 5e-08 4ZPX-A nrPDB 49 2e-06 6QI9-D nrPDB 48 4e-06 3K1J-A nrPDB 48 5e-06 3SC3-A nrPDB 48 5e-06 2QBY-A nrPDB 48 6e-06 2Z4R-A nrPDB 47 2e-05 5X06-E nrPDB 46 2e-05 3SYK-A nrPDB 46 2e-05 4YPL-A nrPDB 46 3e-05 4YPN-A nrPDB 45 4e-05 4CIU-A nrPDB 45 5e-05 6EM8-A nrPDB 45 6e-05 6EMW-B nrPDB 44 7e-05 4XGU-A nrPDB 44 8e-05 5UJM-A nrPDB 44 8e-05 6ED3-A nrPDB 44 8e-05 3M6A-A nrPDB 44 8e-05 6QEL-G nrPDB 44 9e-05 4LJ8-A nrPDB 43 1e-04 5VY8-A nrPDB 42 2e-04 2XSZ-A nrPDB 42 3e-04 4M4W-J nrPDB 42 3e-04 6D00-1 nrPDB 42 4e-04 5D4W-A nrPDB 42 4e-04 4XGC-A nrPDB 42 4e-04 5V8F-9 nrPDB 42 4e-04 6E11-1 nrPDB 42 5e-04 1OFI-A nrPDB 41 6e-04 6AMN-A nrPDB 41 8e-04 3PXI-A nrPDB 41 8e-04 1QVR-A nrPDB 41 0.001 6EMW-E nrPDB 41 0.001 2V1U-A nrPDB 41 0.001 2R44-A nrPDB 41 0.001 6QI8-A nrPDB 41 0.001 3JC7-2 nrPDB 40 0.001 3J3U-A nrPDB 40 0.002 5BQ5-A nrPDB 39 0.002 1UM8-A nrPDB 39 0.003 4R7Y-A nrPDB 39 0.004 3PXG-A nrPDB 39 0.004 5OFO-C nrPDB 39 0.004 1XXI-E nrPDB 38 0.005 1JBK-A nrPDB 38 0.005 4HSE-A nrPDB 38 0.006 1R6B-X nrPDB 37 0.009 3J15-B nrPDB 37 0.015 4I5O-A nrPDB 37 0.016 1FNN-A nrPDB 36 0.018 2P65-A nrPDB 36 0.021 3R8F-A nrPDB 36 0.022 2NZJ-A nrPDB 36 0.032 5XF8-3 nrPDB 36 0.033 4XGC-D nrPDB 36 0.035 2GA8-A nrPDB 35 0.050 5U8S-7 nrPDB 35 0.060 1G8P-A nrPDB 34 0.074 5UJ7-C nrPDB 34 0.076 4WW4-B nrPDB 34 0.087 5FM7-A nrPDB 34 0.100 2I3B-A nrPDB 34 0.11 5C1S-A nrPDB 34 0.11 6J5T-G nrPDB 34 0.11 2AKY-A nrPDB 34 0.12 5D0U-A nrPDB 34 0.12 3F9V-A nrPDB 34 0.14 5M7N-A nrPDB 33 0.15 3UPU-A nrPDB 33 0.15 1Z6G-A nrPDB 33 0.15 4FDG-B nrPDB 33 0.18 2W58-A nrPDB 33 0.20 1V43-A nrPDB 33 0.21 3IIK-A nrPDB 33 0.21 5JZV-A nrPDB 33 0.22 5WWP-B nrPDB 33 0.24 1U0J-A nrPDB 32 0.24 5V8F-A nrPDB 32 0.26 4OI0-A nrPDB 32 0.28 3EC2-A nrPDB 32 0.29 3JC6-4 nrPDB 32 0.32 5G3Y-A nrPDB 32 0.33 5J1S-A nrPDB 32 0.34 5L3S-B nrPDB 32 0.38 4F4J-A nrPDB 32 0.38 2V3C-C nrPDB 32 0.43 2YVU-A nrPDB 32 0.44 2QGZ-A nrPDB 32 0.45 1Y63-A nrPDB 32 0.48 3MD0-A nrPDB 32 0.51 3TK1-A nrPDB 32 0.52 2PJZ-A nrPDB 31 0.56 5HE8-A nrPDB 31 0.57 3L0S-A nrPDB 31 0.58 3NXS-A nrPDB 31 0.59 2SHK-A nrPDB 31 0.59 2QOR-A nrPDB 31 0.69 5U1D-B nrPDB 31 0.80 4Y0A-A nrPDB 31 0.82 1VPL-A nrPDB 31 0.82 1D2N-A nrPDB 31 0.86 1VIA-A nrPDB 31 0.97 5BK4-5 nrPDB 31 0.98 5UJ7-A nrPDB 31 1.0 4EUN-A nrPDB 31 1.1 2CVH-A nrPDB 30 1.2 6CUM-A nrPDB 30 1.2 2BDT-A nrPDB 30 1.3 4CVN-A nrPDB 30 1.5 4XRP-A nrPDB 30 1.6 4B3F-X nrPDB 30 1.6 5V7X-A nrPDB 30 1.7 2YV5-A nrPDB 30 1.7 3GP8-A nrPDB 30 2.0 4V6G-BF nrPDB 29 2.1 5A9K-A nrPDB 29 2.2 2GXA-A nrPDB 29 2.2 2IHY-A nrPDB 29 2.3 5X5Y-B nrPDB 29 2.3 3H1T-A nrPDB 29 2.3 3SR0-A nrPDB 29 2.4 3CM0-A nrPDB 29 2.6 4LV5-B nrPDB 29 2.7 3KN1-A nrPDB 29 2.9 1YE8-A nrPDB 29 3.0 3A4L-A nrPDB 29 3.1 5LKM-A nrPDB 29 3.5 6H3Z-A nrPDB 29 3.6 6GEJ-U nrPDB 29 3.6 6CS8-A nrPDB 29 3.7 4A0L-E nrPDB 29 4.0 4E22-A nrPDB 29 4.2 1P4S-A nrPDB 28 4.6 1IHU-A nrPDB 28 4.8 5GAD-l nrPDB 28 6.1 3JVU-A nrPDB 28 7.5 3TLX-A nrPDB 27 8.1 4KSS-A nrPDB 27 8.2 3EU4-A nrPDB 27 8.6 4A0K-A nrPDB 27 9.4 >1SXJ-C nrPDB Length = 340 Score = 472 bits (1214), Expect = e-133, Method: Composition-based stats. Identities = 339/340 (99%), Positives = 340/340 (100%) Query: 1 MSTSTEKRSKENLPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKT 60 MSTSTEKRSKENLPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKT Sbjct: 1 MSTSTEKRSKENLPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKT 60 Query: 61 STIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEAD 120 STIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEAD Sbjct: 61 STIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEAD 120 Query: 121 AMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSRCTRFRFQPLPQEAIERRIAN 180 AMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLS+CTRFRFQPLPQEAIERRIAN Sbjct: 121 AMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSQCTRFRFQPLPQEAIERRIAN 180 Query: 181 VLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYECCGAPR 240 VLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYECCGAPR Sbjct: 181 VLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYECCGAPR 240 Query: 241 PSDLKAVLKSILEDDWGTAHYTLNKVRSAKGLALIDLIEGIVKILEDYELQNEETRVHLL 300 PSDLKAVLKSILEDDWGTAHYTLNKVRSAKGLALIDLIEGIVKILEDYELQNEETRVHLL Sbjct: 241 PSDLKAVLKSILEDDWGTAHYTLNKVRSAKGLALIDLIEGIVKILEDYELQNEETRVHLL 300 Query: 301 TKLADIEYSISKGGNDQIQGSAVIGAIKASFENETVKANV 340 TKLADIEYSISKGGNDQIQGSAVIGAIKASFENETVKANV Sbjct: 301 TKLADIEYSISKGGNDQIQGSAVIGAIKASFENETVKANV 340 >2CHV-A nrPDB Length = 319 Score = 372 bits (954), Expect = e-103, Method: Composition-based stats. Identities = 122/311 (39%), Positives = 203/311 (65%), Gaps = 6/311 (1%) Query: 15 WVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKN 74 WVEKYRP TLDEV GQ+EVI ++ +V+ +PHLLF GPPGTGKT+T +ALAR+++G+N Sbjct: 7 WVEKYRPRTLDEVVGQDEVIQRLKGYVERKNIPHLLFSGPPGTGKTATAIALARDLFGEN 66 Query: 75 YSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNAAQNALRRVI 134 + + +E+NASD+RGIDVVR++IK+FA T I FK+I LDEADA+T AQ ALRR + Sbjct: 67 WRDNFIEMNASDERGIDVVRHKIKEFARTAPIGGAPFKIIFLDEADALTADAQAALRRTM 126 Query: 135 ERYTKNTRFCVLANYAHKLTPALLSRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAE 194 E Y+K+ RF + NY ++ + SRC FRF+P+P+EA+++R+ + E +K++ + Sbjct: 127 EMYSKSCRFILSCNYVSRIIEPIQSRCAVFRFKPVPKEAMKKRLLEICEKEGVKITEDGL 186 Query: 195 KALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYECCGAPRPSDLKAVLKSILED 254 +ALI +S GD R+ +N LQ A + + D IY+ RP ++ ++++ L+ Sbjct: 187 EALIYISGGDFRKAINALQGAAAIG-----EVVDADTIYQITATARPEEMTELIQTALKG 241 Query: 255 DWGTAHYTLNKVRSAKGLALIDLIEGIVKILEDYELQNEETRVHLLTKLADIEYSISKGG 314 ++ A L+++ G++ D++ + + + + + +V L+ KL ++++ +++G Sbjct: 242 NFMEARELLDRLMVEYGMSGEDIVAQLFREIISMPI-KDSLKVQLIDKLGEVDFRLTEGA 300 Query: 315 NDQIQGSAVIG 325 N++IQ A + Sbjct: 301 NERIQLDAYLA 311 >1IQP-A nrPDB Length = 327 Score = 354 bits (909), Expect = 3e-98, Method: Composition-based stats. Identities = 118/313 (37%), Positives = 198/313 (63%), Gaps = 6/313 (1%) Query: 14 PWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGK 73 PWVEKYRP+ LD++ GQ ++ ++ +V G +PHLLF GPPG GKT+ +ALARE++G+ Sbjct: 14 PWVEKYRPQRLDDIVGQEHIVKRLKHYVKTGSMPHLLFAGPPGVGKTTAALALARELFGE 73 Query: 74 NYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNAAQNALRRV 133 N+ + LELNASD+RGI+V+R ++K+FA T+ I FK+I LDEADA+T AQ ALRR Sbjct: 74 NWRHNFLELNASDERGINVIREKVKEFARTKPIGGASFKIIFLDEADALTQDAQQALRRT 133 Query: 134 IERYTKNTRFCVLANYAHKLTPALLSRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNA 193 +E ++ N RF + NY+ K+ + SRC FRF+PL E I +R+ + +E L+L+ Sbjct: 134 MEMFSSNVRFILSCNYSSKIIEPIQSRCAIFRFRPLRDEDIAKRLRYIAENEGLELTEEG 193 Query: 194 EKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYECCGAPRPSDLKAVLKSILE 253 +A++ ++ GDMRR +N+LQ+ A + +I+D+ ++ RP D++ ++ L+ Sbjct: 194 LQAILYIAEGDMRRAINILQAAAAL-----DKKITDENVFMVASRARPEDIREMMLLALK 248 Query: 254 DDWGTAHYTLNKVRSAKGLALIDLIEGIVKILEDYELQNEETRVHLLTKLADIEYSISKG 313 ++ A L ++ +GL+ D++ + K + + ++ E +V L K+ + + + +G Sbjct: 249 GNFLKAREKLREILLKQGLSGEDVLVQMHKEVFNLPIE-EPKKVLLADKIGEYNFRLVEG 307 Query: 314 GNDQIQGSAVIGA 326 N+ IQ A++ Sbjct: 308 ANEIIQLEALLAQ 320 >1SXJ-B nrPDB Length = 323 Score = 335 bits (859), Expect = 1e-92, Method: Composition-based stats. Identities = 113/317 (35%), Positives = 182/317 (57%), Gaps = 11/317 (3%) Query: 13 LPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYG 72 LPWVEKYRP+ L ++ G E I +++ +G +PH++ G PG GKT+++ LA E+ G Sbjct: 9 LPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLG 68 Query: 73 KNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKG-FKLIILDEADAMTNAAQNALR 131 ++Y++ VLELNASDDRGIDVVRNQIK FA + G K++ILDEAD+MT AQ ALR Sbjct: 69 RSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALR 128 Query: 132 RVIERYTKNTRFCVLANYAHKLTPALLSRCTRFRFQPLPQEAIERRIANVLVHEKLKLSP 191 R +E Y+ +TRF N ++K+ L S+C R+ L E + +R+ ++ E +K + Sbjct: 129 RTMELYSNSTRFAFACNQSNKIIEPLQSQCAILRYSKLSDEDVLKRLLQIIKLEDVKYTN 188 Query: 192 NAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYECCGAPRPSDLKAV-LKS 250 + +A+I + GDMR+ +N LQS A ++ D +++ +P P +K + L S Sbjct: 189 DGLEAIIFTAEGDMRQAINNLQSTVA-----GHGLVNADNVFKIVDSPHPLIVKKMLLAS 243 Query: 251 ILEDDWGTAHYTLNKVRSAKGLALIDLIEGIVKILEDYELQNEETRVHLLTKLADIEYSI 310 LED L K KG + ID++ ++ ++ E R+ ++ ++ I Sbjct: 244 NLEDSIQILRTDLWK----KGYSSIDIVTTSFRVTKNLAQVKESVRLEMIKEIGLTHMRI 299 Query: 311 SKGGNDQIQGSAVIGAI 327 +G +Q ++++ I Sbjct: 300 LEGVGTYLQLASMLAKI 316 >1SXJ-D nrPDB Length = 353 Score = 321 bits (823), Expect = 2e-88, Method: Composition-based stats. Identities = 114/343 (33%), Positives = 184/343 (53%), Gaps = 21/343 (6%) Query: 1 MSTSTEKRSKENLPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKT 60 +S ++S PWVEKYRP+ LDEV Q+ +T ++K + LPH+LFYGPPGTGKT Sbjct: 13 ISKLAAEQSLAQQPWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKT 72 Query: 61 STIVALAREIYGKN-YSNMVLELNASDDRGIDVVRNQIKDFAST----------RQIFSK 109 STI+AL +E+YG + + +LELNASD+RGI +VR ++K+FA Sbjct: 73 STILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCP 132 Query: 110 GFKLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSRCTRFRFQPL 169 +K+IILDEAD+MT AQ+ALRR +E Y+ TRFC++ NY ++ L S+C++FRF+ L Sbjct: 133 PYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASQCSKFRFKAL 192 Query: 170 PQEAIERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSC-KATLDNPDEDEIS 228 R+ + E +K + ++++S GD+RR + +LQS K D I+ Sbjct: 193 DASNAIDRLRFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNIT 252 Query: 229 DDVIYECCGAPRPSDLKAVLKSILEDDWGTAHYTLNKVRSAKGLALIDLIEGIVKILEDY 288 + E G L +++ + D+ +N + A +V L +Y Sbjct: 253 STQVEELAGVVPHDILIEIVEKVKSGDFDEIKKYVNTFMKSGWSA-----ASVVNQLHEY 307 Query: 289 ELQNEETRVHLLTKLADIEY----SISKGGNDQIQGSAVIGAI 327 + N+ + +++ + + ++ G N+ IQ ++ I Sbjct: 308 YITNDNFDTNFKNQISWLLFTTDSRLNNGTNEHIQLLNLLVKI 350 >2CHG-A nrPDB Length = 226 Score = 284 bits (725), Expect = 5e-77, Method: Composition-based stats. Identities = 106/213 (49%), Positives = 152/213 (71%) Query: 15 WVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKN 74 WVEKYRP TLDEV GQ+EVI ++ +V+ +PHLLF GPPGTGKT+T +ALAR+++G+N Sbjct: 7 WVEKYRPRTLDEVVGQDEVIQRLKGYVERKNIPHLLFSGPPGTGKTATAIALARDLFGEN 66 Query: 75 YSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNAAQNALRRVI 134 + + +E+NASD+RGIDVVR++IK+FA T I FK+I LDEADA+T AQ ALRR + Sbjct: 67 WRDNFIEMNASDERGIDVVRHKIKEFARTAPIGGAPFKIIFLDEADALTADAQAALRRTM 126 Query: 135 ERYTKNTRFCVLANYAHKLTPALLSRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAE 194 E Y+K+ RF + NY ++ + SRC FRF+P+P+EA+++R+ + E +K++ + Sbjct: 127 EMYSKSCRFILSCNYVSRIIEPIQSRCAVFRFKPVPKEAMKKRLLEICEKEGVKITEDGL 186 Query: 195 KALIELSNGDMRRVLNVLQSCKATLDNPDEDEI 227 +ALI +S GD R+ +N LQ A + D D I Sbjct: 187 EALIYISGGDFRKAINALQGAAAIGEVVDADTI 219 >1SXJ-A nrPDB Length = 516 Score = 204 bits (519), Expect = 4e-53, Method: Composition-based stats. Identities = 71/286 (24%), Positives = 129/286 (45%), Gaps = 44/286 (15%) Query: 15 WVEKYRPETLDEVYGQNEVITTVRKFV-----------------DEGKLPHLLFYGPPGT 57 W KY P L +V G + ++ ++ G + YGPPG Sbjct: 29 WTVKYAPTNLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGI 88 Query: 58 GKTSTIVALAREIYGKNYSNMVLELNASDDRGIDV----VRNQIKDFA---------STR 104 GKT+ +A+E+ +LE NASD R + V+N + + + + Sbjct: 89 GKTTAAHLVAQEL-----GYDILEQNASDVRSKTLLNAGVKNALDNMSVVGYFKHNEEAQ 143 Query: 105 QIFSKGFKLIILDEADAMTNAAQNALRRVIERYTK-NTRFCVLANYAH--KLTPALLSR- 160 + K F +II+DE D M+ + + ++ + K +T ++ N + K+ P R Sbjct: 144 NLNGKHF-VIIMDEVDGMSGGDRGGVGQLAQFCRKTSTPLILICNERNLPKMRP--FDRV 200 Query: 161 CTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLD 220 C +F+ +I+ R+ + + EK KL PN LI+ + GD+R+V+N+L + T Sbjct: 201 CLDIQFRRPDANSIKSRLMTIAIREKFKLDPNVIDRLIQTTRGDIRQVINLLSTISTTTK 260 Query: 221 NPDEDEISD-DVIYECCGAPRPSDL-KAVLKSILEDDWGTAHYTLN 264 + + I++ +E A +P D+ +L + D G+ ++TLN Sbjct: 261 TINHENINEISKAWEKNIALKPFDIAHKMLDGQIYSDIGSRNFTLN 306 >1SXJ-E nrPDB Length = 354 Score = 190 bits (482), Expect = 8e-49, Method: Composition-based stats. Identities = 83/352 (23%), Positives = 153/352 (43%), Gaps = 45/352 (12%) Query: 15 WVEKYRPETLDEVYGQNEVITTVRKFVDEGK-LPHLLFYGPPGTGKTSTIVALAREIYGK 73 WV+KYRP++L+ + E+ ++ D+ + LPHLL YGP GTGK + +AL I+G Sbjct: 4 WVDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGP 63 Query: 74 NY-------------SNMVLELN---------------ASDDRGI------DVVRNQIKD 99 SN LELN ++DR + +V + + D Sbjct: 64 GVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVD 123 Query: 100 FASTRQIFSKGFKLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLS 159 F ++ + +K +I++EA+++T AQ ALRR +E+Y+KN R ++ + + + S Sbjct: 124 FQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKS 183 Query: 160 RCTRFRFQPLPQEAIERRIANVLVHEKLKL-SPNAEKALIELSNGDMRRVLNVLQSCKAT 218 +C R I +++V+ +E+++L + + K + + SNG++R L +L+S Sbjct: 184 QCLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESMALN 243 Query: 219 LDNPDEDE---ISDDVIYECCGAPRPSDLKAVLKSILEDDWGTAHYTLNKVRSAKGLALI 275 + + I D I + ++K + L + + A I Sbjct: 244 NELALKSSSPIIKPDWIIVI-----HKLTRKIVKERSVNSLIECRAVLYDLLAHCIPANI 298 Query: 276 DLIEGIVKILEDYELQNEETRVHLLTKLADIEYSISKGGNDQIQGSAVIGAI 327 L E +L D E N + ++ + + +S G I + Sbjct: 299 ILKELTFSLL-DVETLNTTNKSSIIEYSSVFDERLSLGNKAIFHLEGFIAKV 349 >3GLF-B nrPDB Length = 395 Score = 189 bits (479), Expect = 2e-48, Method: Composition-based stats. Identities = 71/321 (22%), Positives = 140/321 (43%), Gaps = 34/321 (10%) Query: 15 WVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPH-LLFYGPPGTGKTSTIVALA------ 67 K+RP+T +V GQ V+T + + G++ H LF G G GKTS LA Sbjct: 28 LARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCE 87 Query: 68 --------------REIYGKNYSNMVLELNASDDRGIDVVRNQIKD--FASTRQIFSKGF 111 REI + +++ E++A+ ++ R+ + + +A R F Sbjct: 88 TGITATPCGVCDNCREIEQGRFVDLI-EIDAASRTKVEDTRDLLDNVQYAPAR----GRF 142 Query: 112 KLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSRCTRFRFQPLPQ 171 K+ ++DE ++ + NAL + +E ++ +F + KL +LSRC +F + L Sbjct: 143 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 202 Query: 172 EAIERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDV 231 E I ++ ++L E + P A + L + G +R L++ A+ D ++S Sbjct: 203 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGD----GQVSTQA 258 Query: 232 IYECCGAPRPSDLKAVLKSILEDDWGTAHYTLNKVRSAKGLALIDLIEGIVKILEDYELQ 291 + G +++++++E + G L +A+G+ L+ ++ +L + Sbjct: 259 VSAMLGTLDDDQALSLVEAMVEAN-GERVMALINEAAARGIEWEALLVEMLGLLHRIAMV 317 Query: 292 NEETRVHLLTKLADIEYSISK 312 L +A IE + + Sbjct: 318 QLS-PAALGNDMAAIELRMRE 337 >3U5Z-B nrPDB Length = 324 Score = 188 bits (476), Expect = 4e-48, Method: Composition-based stats. Identities = 72/245 (29%), Positives = 117/245 (47%), Gaps = 21/245 (8%) Query: 17 EKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGP-PGTGKTSTIVALAREIYGKNY 75 +KYRP T+DE T + +GK+PH++ + P PGTGKT+ AL ++ Sbjct: 18 QKYRPSTIDECILPAFDKETFKSITSKGKIPHIILHSPSPGTGKTTVAKALCHDVNAD-- 75 Query: 76 SNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNA-AQNALRRVI 134 ++ +N SD + ID VR + +FAS F K+I++DE D A +Q LR + Sbjct: 76 ---MMFVNGSDCK-IDFVRGPLTNFASAAS-FDGRQKVIVIDEFDRSGLAESQRHLRSFM 130 Query: 135 ERYTKNTRFCVLANYAHKLTPALLSRCTRFRF-QPLPQEAIE------RRIANVLVHEKL 187 E Y+ N + AN + L SRC F QP ++ IE RR+ + HE + Sbjct: 131 EAYSSNCSIIITANNIDGIIKPLQSRCRVITFGQPTDEDKIEMMKQMIRRLTEICKHEGI 190 Query: 188 KLSP-NAEKALIELSNGDMRRVLNVLQ--SCKATLDNPDEDEISDDV--IYECCGAPRPS 242 ++ AL++ + D R+ + L S K LD +++D I + + + Sbjct: 191 AIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLDAGILSLVTNDRGAIDDVLESLKNK 250 Query: 243 DLKAV 247 D+K + Sbjct: 251 DVKQL 255 >3PVS-A nrPDB Length = 447 Score = 186 bits (472), Expect = 1e-47, Method: Composition-based stats. Identities = 60/236 (25%), Positives = 105/236 (44%), Gaps = 20/236 (8%) Query: 14 PWVEKYRPETLDEVYGQNEVITTVR---KFVDEGKLPHLLFYGPPGTGKTSTIVALAREI 70 P + RPE L + GQ ++ + + ++ G L ++ +GPPGTGKT+ +AR Sbjct: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIAR-- 72 Query: 71 YGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNAAQNAL 130 Y+N +E ++ G+ +R I+ R + ++ +DE + Q+A Sbjct: 73 ----YANADVERISAVTSGVKEIREAIERARQNRN--AGRRTILFVDEVHRFNKSQQDAF 126 Query: 131 RRVIERYTKNTRFCVLANYAHKLTPALLSRCTRFRFQPLPQEAIERRIANVLVH------ 184 IE T N + +L ALLSR + + L E IE+ + + Sbjct: 127 LPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYG 186 Query: 185 -EKLKLSPNAEKALIELSNGDMRRVLNVLQSCK--ATLDNPDEDEISDDVIYECCG 237 + + L +A+ EL NGD RR LN L+ A +D+ + + +++ E G Sbjct: 187 GQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAG 242 >1NJG-A nrPDB Length = 250 Score = 185 bits (468), Expect = 3e-47, Method: Composition-based stats. Identities = 58/230 (25%), Positives = 105/230 (45%), Gaps = 28/230 (12%) Query: 15 WVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPH-LLFYGPPGTGKTSTIVALA------ 67 K+RP+T +V GQ V+T + + G++ H LF G G GKTS LA Sbjct: 13 LARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCE 72 Query: 68 --------------REIYGKNYSNMVLELNASDDRGIDVVRNQIKD--FASTRQIFSKGF 111 REI + +++ E++A+ ++ R+ + + +A R F Sbjct: 73 TGITATPCGVCDNCREIEQGRFVDLI-EIDAASRTKVEDTRDLLDNVQYAPAR----GRF 127 Query: 112 KLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSRCTRFRFQPLPQ 171 K+ ++DE ++ + NAL + +E ++ +F + KL +LSRC +F + L Sbjct: 128 KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 187 Query: 172 EAIERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDN 221 E I ++ ++L E + P A + L + G +R L++ A+ D Sbjct: 188 EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDG 237 >5C18-A nrPDB Length = 785 Score = 125 bits (313), Expect = 3e-29, Method: Composition-based stats. Identities = 54/222 (24%), Positives = 88/222 (39%), Gaps = 41/222 (18%) Query: 39 KFVDEGKLPH--LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQ 96 KF+ G P +LFYGPPG GKT A+A E N +G +++ Sbjct: 501 KFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQA----------NFISIKGPELLTMW 550 Query: 97 IKDF-ASTRQIFSKGFK----LIILDEADAMTNA-------AQNALRRVIERY------- 137 + A+ R+IF K + ++ DE D++ A A RVI + Sbjct: 551 FGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGM 610 Query: 138 -TKNTRFCV-LANYAHKLTPALL--SRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNA 193 TK F + N + PA+L R + + PLP E I + + Sbjct: 611 STKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVD 670 Query: 194 EKALIELSNG----DMRRVLNVLQSCKATLDNPDEDEISDDV 231 + L +++NG D+ + ++CK + E EI ++ Sbjct: 671 LEFLAKMTNGFSGADLTEICQ--RACKLAIRESIESEIRPEI 710 Score = 74.1 bits (180), Expect = 8e-14, Method: Composition-based stats. Identities = 52/314 (16%), Positives = 113/314 (35%), Gaps = 42/314 (13%) Query: 47 PHLLFYGPPGTGKTSTIVALAREI----YGKNYSNMVLELNASDDRGIDVVRNQIKDFAS 102 +L YGPPGTGKT A+A E + N ++ +L + +R ++ Sbjct: 238 RGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESN---LRKAFEEAEK 294 Query: 103 TRQIFSKGFKLIILDEADAMT----NAAQNALRRVIERY---------TKNTRFCVLANY 149 +I +DE DA+ RR++ + + N Sbjct: 295 N------APAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNR 348 Query: 150 AHKLTPAL--LSRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNA-EKALIELSNG--- 203 + + PAL R R +P I + +KL+ + + + ++G Sbjct: 349 PNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTK-NMKLADDVDLEQVANETHGHVG 407 Query: 204 -DMRRVLNV--LQSCKATLDNPDEDEISDDVIYECCGAPRPSDLKAVLKSILEDDWGTAH 260 D+ + + LQ+ + +D D ++ + D A D + L + + Sbjct: 408 ADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALS---QSNPSALR 464 Query: 261 YTLNKVRSAKG--LALIDLIEGIVKILEDYELQNEETRVHL-LTKLADIEYSISKGGNDQ 317 T+ +V + ++ ++ ++ L Y +++ + + +T + + G Sbjct: 465 ETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKT 524 Query: 318 IQGSAVIGAIKASF 331 + A+ +A+F Sbjct: 525 LLAKAIANECQANF 538 >6MCK-A nrPDB Length = 606 Score = 114 bits (286), Expect = 4e-26, Method: Composition-based stats. Identities = 58/279 (20%), Positives = 103/279 (36%), Gaps = 41/279 (14%) Query: 39 KFVDEGKLPH--LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQ 96 KF+ G P +LFYGPPG GKT A+A E N +G +++ Sbjct: 294 KFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQA----------NFISIKGPELLTMW 343 Query: 97 IKDF-ASTRQIFSKGFK----LIILDEADAMTNA-------AQNALRRVIERY------- 137 + A+ R+IF K + ++ DE D++ A A RVI + Sbjct: 344 FGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGM 403 Query: 138 -TKNTRFCV-LANYAHKLTPALL--SRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNA 193 TK F + N + PA+L R + + PLP E I + + Sbjct: 404 STKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVD 463 Query: 194 EKALIELSNG----DMRRVLNVLQSCKATLDNPDEDEISDDVIYECCGAPRPSDLKAVLK 249 + L +++NG D+ + ++CK + E EI + + + + + Sbjct: 464 LEFLAKMTNGFSGADLTEICQ--RACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVP 521 Query: 250 SILEDDWGTAHYTLNKVRSAKGLALIDLIEGIVKILEDY 288 I D + A + S + ++ ++ + Sbjct: 522 EIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGF 560 Score = 73.7 bits (179), Expect = 1e-13, Method: Composition-based stats. Identities = 52/314 (16%), Positives = 113/314 (35%), Gaps = 42/314 (13%) Query: 47 PHLLFYGPPGTGKTSTIVALAREI----YGKNYSNMVLELNASDDRGIDVVRNQIKDFAS 102 +L YGPPGTGKT A+A E + N ++ +L + +R ++ Sbjct: 31 RGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESN---LRKAFEEAEK 87 Query: 103 TRQIFSKGFKLIILDEADAMT----NAAQNALRRVIERY---------TKNTRFCVLANY 149 +I +DE DA+ RR++ + + N Sbjct: 88 N------APAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNR 141 Query: 150 AHKLTPAL--LSRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNA-EKALIELSNG--- 203 + + PAL R R +P I + +KL+ + + + ++G Sbjct: 142 PNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTK-NMKLADDVDLEQVANETHGHVG 200 Query: 204 -DMRRVLNV--LQSCKATLDNPDEDEISDDVIYECCGAPRPSDLKAVLKSILEDDWGTAH 260 D+ + + LQ+ + +D D ++ + D A D + L + + Sbjct: 201 ADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALS---QSNPSALR 257 Query: 261 YTLNKVRSAKG--LALIDLIEGIVKILEDYELQNEETRVHL-LTKLADIEYSISKGGNDQ 317 T+ +V + ++ ++ ++ L Y +++ + + +T + + G Sbjct: 258 ETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKT 317 Query: 318 IQGSAVIGAIKASF 331 + A+ +A+F Sbjct: 318 LLAKAIANECQANF 331 >3CF0-A nrPDB Length = 301 Score = 114 bits (285), Expect = 5e-26, Method: Composition-based stats. Identities = 51/209 (24%), Positives = 82/209 (39%), Gaps = 41/209 (19%) Query: 39 KFVDEGKLPH--LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQ 96 KF+ G P +LFYGPPG GKT A+A E N +G +++ Sbjct: 40 KFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQA----------NFISIKGPELLTMW 89 Query: 97 IKDF-ASTRQIFSKGFK----LIILDEADAMTNA-------AQNALRRVIERY------- 137 + A+ R+IF K + ++ DE D++ A A RVI + Sbjct: 90 FGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGM 149 Query: 138 -TKNTRFCV-LANYAHKLTPALL--SRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNA 193 TK F + N + PA+L R + + PLP E I + + Sbjct: 150 STKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVD 209 Query: 194 EKALIELSNG----DMRRVLNVLQSCKAT 218 + L +++NG D+ + ++CK Sbjct: 210 LEFLAKMTNGFSGADLTEICQ--RACKLA 236 >6EF1-K nrPDB Length = 276 Score = 108 bits (270), Expect = 3e-24, Method: Composition-based stats. Identities = 48/163 (29%), Positives = 68/163 (41%), Gaps = 17/163 (10%) Query: 47 PHLLFYGPPGTGKTSTIVALAREIYGK----NYSNMVLELNASDDRGI-DVVRNQIKDFA 101 +L YGPPGTGKT + A+A N S V + R + DV R ++ Sbjct: 55 RGVLLYGPPGTGKTMLVKAVANSTKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAP 114 Query: 102 STRQIFSKGFKLIILDEADAMTNAAQNALRRVIERYTK--------NTRFCVLANYAHKL 153 S IF I DA T + + R +IE T+ N + + N A L Sbjct: 115 SI--IFIDEVDSIATKRFDAQTGSDREVQRILIELLTQMDGFDQSTNVKVIMATNRADTL 172 Query: 154 TPALL--SRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAE 194 PALL R R P ++ ERR+ + K+ L+P A+ Sbjct: 173 DPALLRPGRLDRKIEFPSLRDRRERRLIFGTIASKMSLAPEAD 215 >5WVI-K nrPDB Length = 428 Score = 107 bits (268), Expect = 5e-24, Method: Composition-based stats. Identities = 48/163 (29%), Positives = 68/163 (41%), Gaps = 17/163 (10%) Query: 47 PHLLFYGPPGTGKTSTIVALAREIYGK----NYSNMVLELNASDDRGI-DVVRNQIKDFA 101 +L YGPPGTGKT + A+A N S V + R + DV R ++ Sbjct: 207 RGVLLYGPPGTGKTMLVKAVANSTKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAP 266 Query: 102 STRQIFSKGFKLIILDEADAMTNAAQNALRRVIERYTK--------NTRFCVLANYAHKL 153 S IF I DA T + + R +IE T+ N + + N A L Sbjct: 267 SI--IFIDEVDSIATKRFDAQTGSDREVQRILIELLTQMDGFDQSTNVKVIMATNRADTL 324 Query: 154 TPALL--SRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAE 194 PALL R R P ++ ERR+ + K+ L+P A+ Sbjct: 325 DPALLRPGRLDRKIEFPSLRDRRERRLIFGTIASKMSLAPEAD 367 >6CHS-H nrPDB Length = 819 Score = 107 bits (268), Expect = 6e-24, Method: Composition-based stats. Identities = 55/253 (21%), Positives = 89/253 (35%), Gaps = 52/253 (20%) Query: 25 DEVYGQNEVITTVR-----------KFVDEGKLPH--LLFYGPPGTGKTSTIVALAREIY 71 +++ G +V ++ KF+ G P +LFYGPPGTGKT A+A E Sbjct: 494 EDIGGLEQVKQELKEQVQYPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLAKAVANECA 553 Query: 72 GKNYSNMVLELNASDDRGIDVVRNQIKDF-ASTRQIFSKGFK----LIILDEADAMTN-- 124 N +G +++ + ++ R IF K ++ LDE D++ Sbjct: 554 A----------NFISVKGPELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSIAKAR 603 Query: 125 -----AAQNALRRVIERY---------TKNTRFCVLANYAHKLTPALL--SRCTRFRFQP 168 A A RV+ + KN N +L PAL R + + P Sbjct: 604 GGSIGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDPALCRPGRLDQLIYVP 663 Query: 169 LPQEAIERRIANVLVHEKLKLSPNAEKALIELSNG----DMRRVLNVLQSCKATLDNPDE 224 LP EA I + + + ++G D+ ++ K + Sbjct: 664 LPDEAGRLSILKAQLRKTPVSKDVDLAYIASKTHGFSGADL--AFITQRAVKLAIKESIA 721 Query: 225 DEISDDVIYECCG 237 EI E G Sbjct: 722 AEIERQKAREAAG 734 Score = 76.0 bits (185), Expect = 2e-14, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 75/214 (35%), Gaps = 38/214 (17%) Query: 47 PHLLFYGPPGTGKTSTIVALAREI----YGKNYSNMVLELNASDDRGIDVVRNQIKDFAS 102 +L YGPPGTGKT A+A E + N ++ ++ + +R ++ Sbjct: 255 RGVLLYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESN---LRKAFEEAEK 311 Query: 103 TRQIFSKGFKLIILDEADAMT----NAAQNALRRVIERY---------TKNTRFCVLANY 149 +I +DE D++ RRV+ + N N Sbjct: 312 N------SPAIIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGMKARSNVVVMAATNR 365 Query: 150 AHKLTPAL--LSRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNA-EKALIELSNGDMR 206 + + PAL R R +P I + +KL+ + + + ++G + Sbjct: 366 PNSIDPALRRFGRFDREVDIGIPDPTGRLEILQIHTK-NMKLADDVDLEQIAAETHGYVG 424 Query: 207 RVLNVLQSCKATLD--------NPDEDEISDDVI 232 L L S A + DED I +V+ Sbjct: 425 SDLAALCSEAAMQQIREKMDLIDLDEDTIDAEVL 458 >5EQT-A nrPDB Length = 257 Score = 107 bits (267), Expect = 7e-24, Method: Composition-based stats. Identities = 54/220 (24%), Positives = 87/220 (39%), Gaps = 53/220 (24%) Query: 23 TLDEVYGQNEVITTVRKFVDEGKLP-------------HLLFYGPPGTGKTSTIVALARE 69 T +++ G + + +R+ ++ +L YGPPG GKT ALA E Sbjct: 3 TYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKALAHE 62 Query: 70 IYGKNYSNMVLELNASDDR--GIDVVRNQIKDFAS-TRQIF----SKGFKLIILDEADAM 122 + NA+ R G ++VR I + A ++F K +I +DE DA+ Sbjct: 63 V------------NATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAI 110 Query: 123 -------TNAAQNALRRVIER---------YTKNTRFCVLANYAHKLTPALL--SRCTRF 164 T + + R + + N + N L PALL R R Sbjct: 111 GAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRL 170 Query: 165 RFQPLPQEAIERRIANVLVH-EKLKLSPNAEKALIELSNG 203 PLP E R+ + VH ++KL +A+ E++ G Sbjct: 171 IEVPLP--DFEGRLEILKVHTRRMKLKGVDLRAIAEMTEG 208 >5VHO-F nrPDB Length = 267 Score = 103 bits (257), Expect = 1e-22, Method: Composition-based stats. Identities = 47/179 (26%), Positives = 73/179 (40%), Gaps = 32/179 (17%) Query: 38 RKFVDEGKLP--HLLFYGPPGTGKTSTIVALA---REIYGKNYSNMVLELNASDDRGIDV 92 KF + G P +L YGPPGTGKT A A + + K ++++ D G + Sbjct: 45 EKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD--GAKL 102 Query: 93 VRNQIKDFASTRQIFSKGFKLIILDEADAMTN---AAQNALRRVIE-------------R 136 VR+ FA ++ K +I +DE DA+ ++ A R ++ + Sbjct: 103 VRDA---FALAKE---KAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQ 156 Query: 137 YTKNTRFCVLANYAHKLTPALL--SRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNA 193 + N L PALL R R P+P E RI + K+ +SP+ Sbjct: 157 PNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIH-SRKMNVSPDV 214 >5VFP-F nrPDB Length = 396 Score = 102 bits (253), Expect = 3e-22, Method: Composition-based stats. Identities = 47/179 (26%), Positives = 73/179 (40%), Gaps = 32/179 (17%) Query: 38 RKFVDEGKLP--HLLFYGPPGTGKTSTIVALA---REIYGKNYSNMVLELNASDDRGIDV 92 KF + G P +L YGPPGTGKT A A + + K ++++ D G + Sbjct: 167 EKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD--GAKL 224 Query: 93 VRNQIKDFASTRQIFSKGFKLIILDEADAMTN---AAQNALRRVIE-------------R 136 VR+ FA ++ K +I +DE DA+ ++ A R ++ + Sbjct: 225 VRDA---FALAKE---KAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQ 278 Query: 137 YTKNTRFCVLANYAHKLTPALL--SRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNA 193 + N L PALL R R P+P E RI + K+ +SP+ Sbjct: 279 PNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIH-SRKMNVSPDV 336 >6EPD-M nrPDB Length = 442 Score = 101 bits (251), Expect = 4e-22, Method: Composition-based stats. Identities = 47/179 (26%), Positives = 73/179 (40%), Gaps = 32/179 (17%) Query: 38 RKFVDEGKLP--HLLFYGPPGTGKTSTIVALA---REIYGKNYSNMVLELNASDDRGIDV 92 KF + G P +L YGPPGTGKT A A + + K ++++ D G + Sbjct: 213 EKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD--GAKL 270 Query: 93 VRNQIKDFASTRQIFSKGFKLIILDEADAMTN---AAQNALRRVIE-------------R 136 VR+ FA ++ K +I +DE DA+ ++ A R ++ + Sbjct: 271 VRDA---FALAKE---KAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQ 324 Query: 137 YTKNTRFCVLANYAHKLTPALL--SRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNA 193 + N L PALL R R P+P E RI + K+ +SP+ Sbjct: 325 PNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIH-SRKMNVSPDV 382 >3WHK-A nrPDB Length = 270 Score = 100 bits (248), Expect = 1e-21, Method: Composition-based stats. Identities = 49/213 (23%), Positives = 79/213 (37%), Gaps = 52/213 (24%) Query: 20 RPE-TLDEVYGQNEVITTVRKFVDEGKLP-------------HLLFYGPPGTGKTSTIVA 65 RP T +++ G + + +R+ ++ +L YGPPG GKT A Sbjct: 11 RPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKA 70 Query: 66 LAREIYGKNYSNMVLELNASDDR--GIDVVRNQIKDFAS-TRQIF----SKGFKLIILDE 118 +A E+ NA+ R G ++VR I + A ++F K +I +DE Sbjct: 71 IAHEV------------NATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDE 118 Query: 119 ADAM-------TNAAQNALRRVIER---------YTKNTRFCVLANYAHKLTPALL--SR 160 DA+ T + + R + + N + N L PALL R Sbjct: 119 IDAIGAKRLDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGR 178 Query: 161 CTRFRFQPLPQEAIERRIANVLVHEKLKLSPNA 193 R PLP E +I + K+ + Sbjct: 179 FDRLIEVPLPDEFSRAQILQIH-SRKMTTDDDI 210 >5VHN-D nrPDB Length = 262 Score = 98.4 bits (243), Expect = 4e-21, Method: Composition-based stats. Identities = 43/163 (26%), Positives = 63/163 (38%), Gaps = 18/163 (11%) Query: 47 PHLLFYGPPGTGKTSTIVALAREIYGK----NYSNMVLELNASDDRGI-DVVRNQIKDFA 101 +L YGPPG GKT A+A S V + R + DV R ++ Sbjct: 56 RGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAP 115 Query: 102 STRQIFSKGFKLIILDEADAMTNAAQNALRRVIERYTK--------NTRFCVLANYAHKL 153 + IF I DA T A + R ++E + N + + N A L Sbjct: 116 AI--IFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTL 173 Query: 154 TPALL--SRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAE 194 PALL R R PLP + ++R+ + K+ LS + Sbjct: 174 DPALLRPGRLDRKIEFPLP-DRRQKRLIFSTITSKMNLSEEVD 215 >5T0C-AD nrPDB Length = 418 Score = 97.2 bits (240), Expect = 1e-20, Method: Composition-based stats. Identities = 43/163 (26%), Positives = 63/163 (38%), Gaps = 18/163 (11%) Query: 47 PHLLFYGPPGTGKTSTIVALAREIYGK----NYSNMVLELNASDDRGI-DVVRNQIKDFA 101 +L YGPPG GKT A+A S V + R + DV R ++ Sbjct: 200 RGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAP 259 Query: 102 STRQIFSKGFKLIILDEADAMTNAAQNALRRVIERYTK--------NTRFCVLANYAHKL 153 + IF I DA T A + R ++E + N + + N A L Sbjct: 260 AI--IFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTL 317 Query: 154 TPALL--SRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAE 194 PALL R R PLP + ++R+ + K+ LS + Sbjct: 318 DPALLRPGRLDRKIEFPLP-DRRQKRLIFSTITSKMNLSEEVD 359 >1HQC-A nrPDB Length = 324 Score = 94.9 bits (234), Expect = 5e-20, Method: Composition-based stats. Identities = 46/234 (19%), Positives = 85/234 (36%), Gaps = 38/234 (16%) Query: 20 RPETLDEVYGQNEVITTVRKFVDEGK-----LPHLLFYGPPGTGKTSTIVALAREIYGKN 74 RP+TLDE GQ + +R +++ K L HLL +GPPG GKT+ +A E+ Sbjct: 7 RPKTLDEYIGQERLKQKLRVYLEAAKARKEPLEHLLLFGPPGLGKTTLAHVIAHELG--- 63 Query: 75 YSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNAAQNALRRVI 134 +N G + + D A+ + ++ +DE ++ A+ L + Sbjct: 64 -------VNLRVTSGPAI--EKPGDLAAILANSLEEGDILFIDEIHRLSRQAEEHLYPAM 114 Query: 135 ERY------------------TKNTRFCVLANYAHKLTPALLSRCTRF--RFQPLPQEAI 174 E + +T LLSR P+E Sbjct: 115 EDFVMDIVIGQGPAARTIRLELPRFTLIGATTRPGLITAPLLSRFGIVEHLEYYTPEELA 174 Query: 175 ERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEIS 228 + + + + ++++ A + S G MR + + + E+ I+ Sbjct: 175 QGVMRDARLL-GVRITEEAALEIGRRSRGTMRVAKRLFRRVRDFAQVAGEEVIT 227 >6MSK-B nrPDB Length = 440 Score = 94.1 bits (232), Expect = 8e-20, Method: Composition-based stats. Identities = 52/263 (19%), Positives = 97/263 (36%), Gaps = 51/263 (19%) Query: 16 VEKYRPETLDEVYGQNEVITTVRKFVDEGKLP-------------HLLFYGPPGTGKTST 62 VEK ET ++ G + I +++ V+ ++ YGPPGTGKT Sbjct: 176 VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLL 235 Query: 63 IVALARE---IYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEA 119 A+A + + + + +++ D G +VR R ++ +DE Sbjct: 236 AKAVANQTSATFLRVVGSELIQKYLGD--GPKLVRELF------RVAEEHAPSIVFIDEI 287 Query: 120 DAMTN-------AAQNALRRVIERY---------TKNTRFCVLANYAHKLTPALL--SRC 161 DA+ + ++R + + + + N L PAL+ R Sbjct: 288 DAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRI 347 Query: 162 TRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALI----ELSNGDMRRVLNV-----L 212 R PLP E ++RI + LI +LS D++ + L Sbjct: 348 DRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMAL 407 Query: 213 QSCKATLDNPDEDEISDDVIYEC 235 + + + N D + ++V+Y+ Sbjct: 408 RERRMKVTNEDFKKSKENVLYKK 430 >5VHF-B nrPDB Length = 340 Score = 93.7 bits (231), Expect = 1e-19, Method: Composition-based stats. Identities = 47/234 (20%), Positives = 84/234 (35%), Gaps = 46/234 (19%) Query: 16 VEKYRPETLDEVYGQNEVITTVRKFVDEGKLP-------------HLLFYGPPGTGKTST 62 VEK ET ++ G + I +++ V+ ++ YGPPGTGKT Sbjct: 84 VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLL 143 Query: 63 IVALARE---IYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEA 119 A+A + + + + +++ D G +VR R ++ +DE Sbjct: 144 AKAVANQTSATFLRVVGSELIQKYLGD--GPKLVRELF------RVAEEHAPSIVFIDEI 195 Query: 120 DAMTN-------AAQNALRRVIERY---------TKNTRFCVLANYAHKLTPALL--SRC 161 DA+ + ++R + + + + N L PAL+ R Sbjct: 196 DAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRI 255 Query: 162 TRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALI----ELSNGDMRRVLNV 211 R PLP E ++RI + LI +LS D++ + Sbjct: 256 DRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTE 309 >5VFP-B nrPDB Length = 389 Score = 93.3 bits (230), Expect = 1e-19, Method: Composition-based stats. Identities = 47/234 (20%), Positives = 84/234 (35%), Gaps = 46/234 (19%) Query: 16 VEKYRPETLDEVYGQNEVITTVRKFVDEGKLP-------------HLLFYGPPGTGKTST 62 VEK ET ++ G + I +++ V+ ++ YGPPGTGKT Sbjct: 125 VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLL 184 Query: 63 IVALARE---IYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEA 119 A+A + + + + +++ D G +VR R ++ +DE Sbjct: 185 AKAVANQTSATFLRVVGSELIQKYLGD--GPKLVRELF------RVAEEHAPSIVFIDEI 236 Query: 120 DAMTN-------AAQNALRRVIERY---------TKNTRFCVLANYAHKLTPALL--SRC 161 DA+ + ++R + + + + N L PAL+ R Sbjct: 237 DAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRI 296 Query: 162 TRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALI----ELSNGDMRRVLNV 211 R PLP E ++RI + LI +LS D++ + Sbjct: 297 DRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTE 350 >3H4M-A nrPDB Length = 285 Score = 92.6 bits (228), Expect = 2e-19, Method: Composition-based stats. Identities = 49/193 (25%), Positives = 80/193 (41%), Gaps = 43/193 (22%) Query: 40 FVDEGKLP--HLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDR--GIDVVRN 95 F G P +L YGPPGTGKT A+A E NA+ R G ++V+ Sbjct: 43 FEKVGIEPPKGILLYGPPGTGKTLLAKAVATET------------NATFIRVVGSELVKK 90 Query: 96 QIKDFAS-TRQIF----SKGFKLIILDEADAM--------TNAAQNALRRVIERYTK--- 139 I + AS + IF K +I +DE DA+ T + R +++ + Sbjct: 91 FIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDALTGGDREVQRTLMQLLAEMDG 150 Query: 140 -----NTRFCVLANYAHKLTPALL--SRCTRFRFQPLPQEAIERRIANVLVH-EKLKLSP 191 + + N L PA+L R R P P E + R+ + +H K+ L+ Sbjct: 151 FDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDE--KGRLEILKIHTRKMNLAE 208 Query: 192 NA-EKALIELSNG 203 + + + +++ G Sbjct: 209 DVNLEEIAKMTEG 221 >5VHO-B nrPDB Length = 267 Score = 92.6 bits (228), Expect = 2e-19, Method: Composition-based stats. Identities = 47/234 (20%), Positives = 84/234 (35%), Gaps = 46/234 (19%) Query: 16 VEKYRPETLDEVYGQNEVITTVRKFVDEGKLP-------------HLLFYGPPGTGKTST 62 VEK ET ++ G + I +++ V+ ++ YGPPGTGKT Sbjct: 10 VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLL 69 Query: 63 IVALARE---IYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEA 119 A+A + + + + +++ D G +VR R ++ +DE Sbjct: 70 AKAVANQTSATFLRVVGSELIQKYLGD--GPKLVRELF------RVAEEHAPSIVFIDEI 121 Query: 120 DAMTN-------AAQNALRRVIERY---------TKNTRFCVLANYAHKLTPALL--SRC 161 DA+ + ++R + + + + N L PAL+ R Sbjct: 122 DAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRI 181 Query: 162 TRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALI----ELSNGDMRRVLNV 211 R PLP E ++RI + LI +LS D++ + Sbjct: 182 DRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTE 235 >5VC7-A nrPDB Length = 564 Score = 90.6 bits (223), Expect = 9e-19, Method: Composition-based stats. Identities = 55/263 (20%), Positives = 94/263 (35%), Gaps = 49/263 (18%) Query: 25 DEVYGQNEVITTVRKFVDEGKLP-------------HLLFYGPPGTGKTSTIVALAREIY 71 D++ G +V +++ V+ L L YGPPG GKT A+A E Sbjct: 286 DDIGGLEDVKREIKETVELPLLKPDVFKRLGIRPSKGFLLYGPPGVGKTLLAKAVATESN 345 Query: 72 GKNYSNMVLELNASDDRGIDVVRNQIKDFAST-RQIFSK----GFKLIILDEADAM---- 122 N +G +V+ + + R+IF K ++ LDE D++ Sbjct: 346 A----------NFISIKGPEVLSKWVGESEKAIREIFKKAKQVAPAIVFLDEIDSIAPRR 395 Query: 123 -TNAAQNALRRVIERYTKN---------TRFCVLANYAHKLTPALL--SRCTRFRFQPLP 170 T + R++ + + N + PALL R + + P P Sbjct: 396 GTTSDSGVTERIVNQLLTSLDGIEVMNGVVVIGATNRPDIMDPALLRAGRFDKLIYIPPP 455 Query: 171 QEAIERRIANVLVHEKLKLSPNA-EKALIELSNGDMRRVLNVL---QSCKATLDNPDEDE 226 + I V + L+P+ + + + G + L L A +NPD Sbjct: 456 DKEARLSILKVHTK-NMPLAPDVDLNDIAQRTEGYVGADLENLCREAGMNAYRENPDATS 514 Query: 227 ISDDVIYECCGAPRPSDLKAVLK 249 +S + RPS + V+K Sbjct: 515 VSQKNFLDALKTIRPSVDEEVIK 537 Score = 69.8 bits (169), Expect = 2e-12, Method: Composition-based stats. Identities = 38/167 (22%), Positives = 60/167 (35%), Gaps = 32/167 (19%) Query: 40 FVDEGKLP--HLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQI 97 F G P ++ YGPPGTGKT A+A E G N+ ++ G +++ Sbjct: 35 FERLGITPPKGVILYGPPGTGKTLIARAVANE-SGANFLSI---------NGPEIMSKYY 84 Query: 98 KDFAST-RQIFSK----GFKLIILDEADAMTNAAQNAL----RRVIERY---------TK 139 R+IFSK +I +DE D++ + RRV+ + Sbjct: 85 GQSEQKLREIFSKAEETAPSIIFIDEIDSIAPKREEVQGEVERRVVAQLLTLMDGMKERG 144 Query: 140 NTRFCVLANYAHKLTPALL--SRCTRFRFQPLPQEAIERRIANVLVH 184 + N + PAL R R +P + I + Sbjct: 145 HVIVIGATNRIDAIDPALRRPGRFDREIEIGVPDRNGRKEILMIHTR 191 >6EF2-J nrPDB Length = 262 Score = 89.9 bits (221), Expect = 2e-18, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 68/180 (37%), Gaps = 35/180 (19%) Query: 48 HLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFAS-TRQI 106 ++ YGPPGTGKT A+A K G ++V+ I + + R++ Sbjct: 41 GVILYGPPGTGKTLLARAVAHHTDCKFIR----------VSGAELVQKYIGEGSRMVREL 90 Query: 107 F----SKGFKLIILDEADAM-------TNAAQNALRRVIERY---------TKNTRFCVL 146 F +I +DE D++ + + ++R + +KN + + Sbjct: 91 FVMAREHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMA 150 Query: 147 ANYAHKLTPALL--SRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNA-EKALIELSNG 203 N L PALL R R P P A I + K+ L+ + + E NG Sbjct: 151 TNRLDILDPALLRPGRIDRKIEFPPPSVAARAEILRIH-SRKMNLTRGINLRKVAEKMNG 209 >3JCO-J nrPDB Length = 405 Score = 89.5 bits (220), Expect = 2e-18, Method: Composition-based stats. Identities = 50/229 (21%), Positives = 84/229 (36%), Gaps = 48/229 (20%) Query: 12 NLPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLP-------------HLLFYGPPGTG 58 +L VEK T D V G + I +++ ++ ++ YGPPGTG Sbjct: 135 SLMMVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTG 194 Query: 59 KTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFAS-TRQIF----SKGFKL 113 KT A+A K G ++V+ I + + R++F + Sbjct: 195 KTLLARAVAHHTDCKFIR----------VSGAELVQKYIGEGSRMVRELFVMAREHAPSI 244 Query: 114 IILDEADAM-------TNAAQNALRRVIERY---------TKNTRFCVLANYAHKLTPAL 157 I +DE D++ + + ++R + +KN + + N L PAL Sbjct: 245 IFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPAL 304 Query: 158 L--SRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNA-EKALIELSNG 203 L R R P P A I + K+ L+ + + E NG Sbjct: 305 LRPGRIDRKIEFPPPSVAARAEILRIH-SRKMNLTRGINLRKVAEKMNG 352 >5G4G-A nrPDB Length = 721 Score = 89.1 bits (219), Expect = 2e-18, Method: Composition-based stats. Identities = 55/263 (20%), Positives = 94/263 (35%), Gaps = 49/263 (18%) Query: 25 DEVYGQNEVITTVRKFVDEGKLP-------------HLLFYGPPGTGKTSTIVALAREIY 71 D++ G +V +++ V+ L L YGPPG GKT A+A E Sbjct: 462 DDIGGLEDVKREIKETVELPLLKPDVFKRLGIRPSKGFLLYGPPGVGKTLLAKAVATESN 521 Query: 72 GKNYSNMVLELNASDDRGIDVVRNQIKDFAST-RQIFSK----GFKLIILDEADAM---- 122 N +G +V+ + + R+IF K ++ LDE D++ Sbjct: 522 A----------NFISIKGPEVLSKWVGESEKAIREIFKKAKQVAPAIVFLDEIDSIAPRR 571 Query: 123 -TNAAQNALRRVIERYTKN---------TRFCVLANYAHKLTPALL--SRCTRFRFQPLP 170 T + R++ + + N + PALL R + + P P Sbjct: 572 GTTSDSGVTERIVNQLLTSLDGIEVMNGVVVIGATNRPDIMDPALLRAGRFDKLIYIPPP 631 Query: 171 QEAIERRIANVLVHEKLKLSPNA-EKALIELSNGDMRRVLNVL---QSCKATLDNPDEDE 226 + I V + L+P+ + + + G + L L A +NPD Sbjct: 632 DKEARLSILKVHTK-NMPLAPDVDLNDIAQRTEGYVGADLENLCREAGMNAYRENPDATS 690 Query: 227 ISDDVIYECCGAPRPSDLKAVLK 249 +S + RPS + V+K Sbjct: 691 VSQKNFLDALKTIRPSVDEEVIK 713 Score = 68.7 bits (166), Expect = 4e-12, Method: Composition-based stats. Identities = 38/167 (22%), Positives = 60/167 (35%), Gaps = 32/167 (19%) Query: 40 FVDEGKLP--HLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQI 97 F G P ++ YGPPGTGKT A+A E G N+ ++ G +++ Sbjct: 211 FERLGITPPKGVILYGPPGTGKTLIARAVANE-SGANFLSI---------NGPEIMSKYY 260 Query: 98 KDFAST-RQIFSK----GFKLIILDEADAMTNAAQNAL----RRVIERY---------TK 139 R+IFSK +I +DE D++ + RRV+ + Sbjct: 261 GQSEQKLREIFSKAEETAPSIIFIDEIDSIAPKREEVQGEVERRVVAQLLTLMDGMKERG 320 Query: 140 NTRFCVLANYAHKLTPALL--SRCTRFRFQPLPQEAIERRIANVLVH 184 + N + PAL R R +P + I + Sbjct: 321 HVIVIGATNRIDAIDPALRRPGRFDREIEIGVPDRNGRKEILMIHTR 367 >5VHP-C nrPDB Length = 266 Score = 89.1 bits (219), Expect = 2e-18, Method: Composition-based stats. Identities = 50/229 (21%), Positives = 82/229 (35%), Gaps = 48/229 (20%) Query: 12 NLPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLP-------------HLLFYGPPGTG 58 +L VEK T + + G ++ I +++ ++ +L YGPPGTG Sbjct: 7 SLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTG 66 Query: 59 KTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFAS-TRQIF----SKGFKL 113 KT A+A G ++V+ I + A R++F + Sbjct: 67 KTLLARAVAHHTDCTFIR----------VSGSELVQKFIGEGARMVRELFVMAREHAPSI 116 Query: 114 IILDEADAM--------TNAAQNALRRVIERY--------TKNTRFCVLANYAHKLTPAL 157 I +DE D++ + R ++E TKN + + N L AL Sbjct: 117 IFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSAL 176 Query: 158 L--SRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNA-EKALIELSNG 203 L R R P P E I + K+ L+ + + EL G Sbjct: 177 LRPGRIDRKIEFPPPNEEARLDILKIH-SRKMNLTRGINLRKIAELMPG 224 >5M32-h nrPDB Length = 355 Score = 88.7 bits (218), Expect = 3e-18, Method: Composition-based stats. Identities = 50/229 (21%), Positives = 82/229 (35%), Gaps = 48/229 (20%) Query: 12 NLPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLP-------------HLLFYGPPGTG 58 +L VEK T + + G ++ I +++ ++ +L YGPPGTG Sbjct: 99 SLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTG 158 Query: 59 KTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFAS-TRQIF----SKGFKL 113 KT A+A G ++V+ I + A R++F + Sbjct: 159 KTLLARAVAHHTDCTFIR----------VSGSELVQKFIGEGARMVRELFVMAREHAPSI 208 Query: 114 IILDEADAM--------TNAAQNALRRVIERY--------TKNTRFCVLANYAHKLTPAL 157 I +DE D++ + R ++E TKN + + N L AL Sbjct: 209 IFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSAL 268 Query: 158 L--SRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNA-EKALIELSNG 203 L R R P P E I + K+ L+ + + EL G Sbjct: 269 LRPGRIDRKIEFPPPNEEARLDILKIH-SRKMNLTRGINLRKIAELMPG 316 >5VHP-E nrPDB Length = 262 Score = 88.3 bits (217), Expect = 5e-18, Method: Composition-based stats. Identities = 51/201 (25%), Positives = 80/201 (39%), Gaps = 39/201 (19%) Query: 40 FVDEGKLP--HLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQI 97 F G +P L YGPPGTGKT A+A ++ L++ +S +V I Sbjct: 32 FQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL-----DCNFLKVVSSS-----IVDKYI 81 Query: 98 KDFAS-TRQIFSKGFK----LIILDEADAM--------TNAAQNALRRVIERYTK----- 139 + A R++F+ +I +DE DA+ T+A + R ++E + Sbjct: 82 GESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 141 Query: 140 ---NTRFCVLANYAHKLTPALL--SRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAE 194 + + N L PALL R R LP E I + K Sbjct: 142 TLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDY 201 Query: 195 KALIELSNG----DMRRVLNV 211 +A+++LS+G D+R V Sbjct: 202 EAIVKLSDGFNGADLRNVCTE 222 >5GJQ-J nrPDB Length = 406 Score = 88.0 bits (216), Expect = 5e-18, Method: Composition-based stats. Identities = 50/229 (21%), Positives = 82/229 (35%), Gaps = 48/229 (20%) Query: 12 NLPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLP-------------HLLFYGPPGTG 58 +L VEK T + + G ++ I +++ ++ +L YGPPGTG Sbjct: 136 SLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTG 195 Query: 59 KTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFAS-TRQIF----SKGFKL 113 KT A+A G ++V+ I + A R++F + Sbjct: 196 KTLLARAVAHHTDCTFIR----------VSGSELVQKFIGEGARMVRELFVMAREHAPSI 245 Query: 114 IILDEADAM--------TNAAQNALRRVIERY--------TKNTRFCVLANYAHKLTPAL 157 I +DE D++ + R ++E TKN + + N L AL Sbjct: 246 IFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSAL 305 Query: 158 L--SRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNA-EKALIELSNG 203 L R R P P E I + K+ L+ + + EL G Sbjct: 306 LRPGRIDRKIEFPPPNEEARLDILKIH-SRKMNLTRGINLRKIAELMPG 353 >6EF0-L nrPDB Length = 273 Score = 87.6 bits (215), Expect = 6e-18, Method: Composition-based stats. Identities = 54/209 (25%), Positives = 83/209 (39%), Gaps = 30/209 (14%) Query: 48 HLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIF 107 +L YGPPGTGKT A+A G N+ D + R + FA ++ Sbjct: 54 GVLLYGPPGTGKTLLAKAVA-ATIGANFI-FSPASGIVDKYIGESARIIREMFAYAKE-- 109 Query: 108 SKGFKLIILDEADAM--------TNAAQNALRRVIERYTK--------NTRFCVLANYAH 151 +I +DE DA+ T+A + R ++E T+ T+ + N Sbjct: 110 -HEPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPD 168 Query: 152 KLTPALL--SRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNG----DM 205 L PALL R R PLP EA I + + K +A +++S+G D+ Sbjct: 169 TLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADI 228 Query: 206 RRVLNVLQSCKATLDNPDEDEISDDVIYE 234 R A D+ D I+ D + + Sbjct: 229 RN-CATEAGFFAIRDDRDH--INPDDLMK 254 >6HE4-H nrPDB Length = 267 Score = 87.6 bits (215), Expect = 7e-18, Method: Composition-based stats. Identities = 49/191 (25%), Positives = 77/191 (40%), Gaps = 39/191 (20%) Query: 40 FVDEGKLP--HLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQI 97 F + G P +L YGPPGTGKT A+A + + G + V+ I Sbjct: 45 FAEVGIEPPKGVLLYGPPGTGKTLLAKAVANQTRATFIRVV----------GSEFVQKYI 94 Query: 98 KDFAS-TRQIF----SKGFKLIILDEADAM--------TNAAQNALRRVIE--------R 136 + A R++F K +I +DE DA+ T+ + R +++ Sbjct: 95 GEGARLVREVFQLAKEKAPSIIFIDELDAIAARRTNSDTSGDREVQRTMMQLLAELDGFD 154 Query: 137 YTKNTRFCVLANYAHKLTPALL--SRCTRFRFQPLPQEAIERRIANVLVH-EKLKLSPNA 193 + + N L PA+L R R PLP E RI +H K+KL+ + Sbjct: 155 PRGDVKVIGATNRIDILDPAILRPGRFDRIIEVPLPT--FEGRIQIFKIHTRKMKLAEDV 212 Query: 194 E-KALIELSNG 203 + K L ++ G Sbjct: 213 DFKELARITEG 223 >6HE9-H nrPDB Length = 390 Score = 87.2 bits (214), Expect = 1e-17, Method: Composition-based stats. Identities = 49/191 (25%), Positives = 77/191 (40%), Gaps = 39/191 (20%) Query: 40 FVDEGKLP--HLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQI 97 F + G P +L YGPPGTGKT A+A + + G + V+ I Sbjct: 159 FAEVGIEPPKGVLLYGPPGTGKTLLAKAVANQTRATFIRVV----------GSEFVQKYI 208 Query: 98 KDFAS-TRQIF----SKGFKLIILDEADAM--------TNAAQNALRRVIE--------R 136 + A R++F K +I +DE DA+ T+ + R +++ Sbjct: 209 GEGARLVREVFQLAKEKAPSIIFIDELDAIAARRTNSDTSGDREVQRTMMQLLAELDGFD 268 Query: 137 YTKNTRFCVLANYAHKLTPALL--SRCTRFRFQPLPQEAIERRIANVLVH-EKLKLSPNA 193 + + N L PA+L R R PLP E RI +H K+KL+ + Sbjct: 269 PRGDVKVIGATNRIDILDPAILRPGRFDRIIEVPLPT--FEGRIQIFKIHTRKMKLAEDV 326 Query: 194 E-KALIELSNG 203 + K L ++ G Sbjct: 327 DFKELARITEG 337 >6EF0-M nrPDB Length = 258 Score = 86.0 bits (211), Expect = 2e-17, Method: Composition-based stats. Identities = 44/194 (22%), Positives = 70/194 (36%), Gaps = 32/194 (16%) Query: 48 HLLFYGPPGTGKTSTIVALA---REIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTR 104 L YGPPGTGKT A A + K + ++++ + G +VR+ FA + Sbjct: 42 GALMYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIGE--GAKLVRDA---FALAK 96 Query: 105 QIFSKGFKLIILDEADAMTN--------AAQNALRRVIERYTK--------NTRFCVLAN 148 + K +I +DE DA+ + R ++E + + N Sbjct: 97 E---KAPTIIFIDELDAIGTKRFDSEKSGDREVQRTMLELLNQLDGFSSDDRVKVLAATN 153 Query: 149 YAHKLTPALL--SRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELS---NG 203 L PALL R R PLP E +I + + + L + NG Sbjct: 154 RVDVLDPALLRSGRLDRKIEFPLPSEDSRAQILQIHSRKMTTDDDINWQELARSTDEFNG 213 Query: 204 DMRRVLNVLQSCKA 217 + + V A Sbjct: 214 AQLKAVTVEAGMIA 227 >6MSD-E nrPDB Length = 403 Score = 86.0 bits (211), Expect = 2e-17, Method: Composition-based stats. Identities = 51/201 (25%), Positives = 80/201 (39%), Gaps = 39/201 (19%) Query: 40 FVDEGKLP--HLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQI 97 F G +P L YGPPGTGKT A+A ++ L++ +S +V I Sbjct: 173 FQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL-----DCNFLKVVSSS-----IVDKYI 222 Query: 98 KDFAS-TRQIFSKGFK----LIILDEADAM--------TNAAQNALRRVIERYTK----- 139 + A R++F+ +I +DE DA+ T+A + R ++E + Sbjct: 223 GESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFD 282 Query: 140 ---NTRFCVLANYAHKLTPALL--SRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAE 194 + + N L PALL R R LP E I + K Sbjct: 283 TLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDY 342 Query: 195 KALIELSNG----DMRRVLNV 211 +A+++LS+G D+R V Sbjct: 343 EAIVKLSDGFNGADLRNVCTE 363 >5WVI-L nrPDB Length = 437 Score = 84.9 bits (208), Expect = 5e-17, Method: Composition-based stats. Identities = 54/209 (25%), Positives = 83/209 (39%), Gaps = 30/209 (14%) Query: 48 HLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIF 107 +L YGPPGTGKT A+A G N+ D + R + FA ++ Sbjct: 217 GVLLYGPPGTGKTLLAKAVA-ATIGANFI-FSPASGIVDKYIGESARIIREMFAYAKE-- 272 Query: 108 SKGFKLIILDEADAM--------TNAAQNALRRVIERYTK--------NTRFCVLANYAH 151 +I +DE DA+ T+A + R ++E T+ T+ + N Sbjct: 273 -HEPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPD 331 Query: 152 KLTPALL--SRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNG----DM 205 L PALL R R PLP EA I + + K +A +++S+G D+ Sbjct: 332 TLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADI 391 Query: 206 RRVLNVLQSCKATLDNPDEDEISDDVIYE 234 R A D+ D I+ D + + Sbjct: 392 RN-CATEAGFFAIRDDRDH--INPDDLMK 417 >6FVU-L nrPDB Length = 388 Score = 84.5 bits (207), Expect = 6e-17, Method: Composition-based stats. Identities = 54/209 (25%), Positives = 83/209 (39%), Gaps = 30/209 (14%) Query: 48 HLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIF 107 +L YGPPGTGKT A+A G N+ D + R + FA ++ Sbjct: 169 GVLLYGPPGTGKTLLAKAVA-ATIGANFI-FSPASGIVDKYIGESARIIREMFAYAKE-- 224 Query: 108 SKGFKLIILDEADAM--------TNAAQNALRRVIERYTK--------NTRFCVLANYAH 151 +I +DE DA+ T+A + R ++E T+ T+ + N Sbjct: 225 -HEPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPD 283 Query: 152 KLTPALL--SRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNG----DM 205 L PALL R R PLP EA I + + K +A +++S+G D+ Sbjct: 284 TLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADI 343 Query: 206 RRVLNVLQSCKATLDNPDEDEISDDVIYE 234 R A D+ D I+ D + + Sbjct: 344 RN-CATEAGFFAIRDDRDH--INPDDLMK 369 >5VFU-A nrPDB Length = 361 Score = 83.7 bits (205), Expect = 1e-16, Method: Composition-based stats. Identities = 47/229 (20%), Positives = 74/229 (32%), Gaps = 50/229 (21%) Query: 23 TLDEVYGQNEVITTVRKFVDEGKLP-------------HLLFYGPPGTGKTSTIVALARE 69 T +V G E I +R+ V+ L +L +GPPGTGKT A+A Sbjct: 101 TYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANR 160 Query: 70 IYGKNYSNMVLELNASDDRGIDVVRNQIKDFAS-TRQIFSKGFK----LIILDEADAMTN 124 + G ++V+ + + A R++F LI DE DA+ Sbjct: 161 TDACFIRVI----------GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGG 210 Query: 125 -------AAQNALRRVIER---------YTKNTRFCVLANYAHKLTPALL--SRCTRFRF 166 N ++R + N + + N L PAL+ R R Sbjct: 211 ARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIE 270 Query: 167 QPLPQEAIERRIANVLVHEKLKLSPNAEKALIEL----SNGDMRRVLNV 211 LP I + + L L + ++R V Sbjct: 271 FSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTE 319 >5VHO-A nrPDB Length = 267 Score = 83.3 bits (204), Expect = 1e-16, Method: Composition-based stats. Identities = 47/229 (20%), Positives = 74/229 (32%), Gaps = 50/229 (21%) Query: 23 TLDEVYGQNEVITTVRKFVDEGKLP-------------HLLFYGPPGTGKTSTIVALARE 69 T +V G E I +R+ V+ L +L +GPPGTGKT A+A Sbjct: 16 TYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANR 75 Query: 70 IYGKNYSNMVLELNASDDRGIDVVRNQIKDFAS-TRQIFSKGFK----LIILDEADAMTN 124 + G ++V+ + + A R++F LI DE DA+ Sbjct: 76 TDACFIRVI----------GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGG 125 Query: 125 -------AAQNALRRVIER---------YTKNTRFCVLANYAHKLTPALL--SRCTRFRF 166 N ++R + N + + N L PAL+ R R Sbjct: 126 ARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIE 185 Query: 167 QPLPQEAIERRIANVLVHEKLKLSPNAEKALIEL----SNGDMRRVLNV 211 LP I + + L L + ++R V Sbjct: 186 FSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTE 234 >5A5B-M nrPDB Length = 434 Score = 83.3 bits (204), Expect = 1e-16, Method: Composition-based stats. Identities = 40/176 (22%), Positives = 65/176 (36%), Gaps = 29/176 (16%) Query: 48 HLLFYGPPGTGKTSTIVALA---REIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTR 104 L YGPPGTGKT A A + K + ++++ + G +VR+ FA + Sbjct: 217 GALMYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIGE--GAKLVRDA---FALAK 271 Query: 105 QIFSKGFKLIILDEADAMTN--------AAQNALRRVIERYTK--------NTRFCVLAN 148 + K +I +DE DA+ + R ++E + + N Sbjct: 272 E---KAPTIIFIDELDAIGTKRFDSEKSGDREVQRTMLELLNQLDGFSSDDRVKVLAATN 328 Query: 149 YAHKLTPALL--SRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSN 202 L PALL R R PLP E +I + + + L ++ Sbjct: 329 RVDVLDPALLRSGRLDRKIEFPLPSEDSRAQILQIHSRKMTTDDDINWQELARSTD 384 >1IN6-A nrPDB Length = 334 Score = 82.6 bits (202), Expect = 3e-16, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 92/252 (36%), Gaps = 37/252 (14%) Query: 16 VEKYRPETLDEVYGQNEVITTVRKFVDEGKLP-----HLLFYGPPGTGKTSTIVALAREI 70 V+ RP++LDE GQ V + ++ K+ H+L GPPG G+T+ +A E Sbjct: 16 VQFLRPKSLDEFIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGRTTLAHIIASE- 74 Query: 71 YGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNAAQNAL 130 L+ N G +V+ D A+ +G ++ +DE + A + L Sbjct: 75 ---------LQTNIHVTSGPVLVK--QGDMAAILTSLERG-DVLFIDEIHRLNKAVEELL 122 Query: 131 RRVIERYT-----------KNTRFCV-------LANYAHKLTPALLSRCTRFRFQPL-PQ 171 IE + K+ R + + L+ L SR Sbjct: 123 YSAIEDFQIDIMIGKGPSAKSIRIDIQPFTLVGATTRSGLLSSPLRSRFGIILELDFYTV 182 Query: 172 EAIERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDV 231 + ++ I +++ A + + + S G R + + + + L D I+ D+ Sbjct: 183 KELKEIIKRAASLMDVEIEDAAAEMIAKRSRGTPRIAIRLTKRVRDMLTVVKADRINTDI 242 Query: 232 IYECCGAPRPSD 243 + + D Sbjct: 243 VLKTMEVLNIDD 254 >6EPC-H nrPDB Length = 433 Score = 82.2 bits (201), Expect = 3e-16, Method: Composition-based stats. Identities = 47/229 (20%), Positives = 76/229 (33%), Gaps = 50/229 (21%) Query: 23 TLDEVYGQNEVITTVRKFVDEGKLP-------------HLLFYGPPGTGKTSTIVALARE 69 T +V G E I +R+ V+ L +L +GPPGTGKT A+A Sbjct: 173 TYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANR 232 Query: 70 IYGKNYSNMVLELNASDDRGIDVVRNQIKDFAS-TRQIFSKGFK----LIILDEADAMTN 124 + ++ G ++V+ + + A R++F LI DE DA+ Sbjct: 233 TDAC-FIPVI---------GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGG 282 Query: 125 -------AAQNALRRVIER---------YTKNTRFCVLANYAHKLTPALL--SRCTRFRF 166 N ++R + N + + N L PAL+ R R Sbjct: 283 ARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIE 342 Query: 167 QPLPQEAIERRIANVLVHEKLKLSPNAEKALIEL----SNGDMRRVLNV 211 LP I + + L L + ++R V Sbjct: 343 FSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTE 391 >4D81-A nrPDB Length = 283 Score = 82.2 bits (201), Expect = 3e-16, Method: Composition-based stats. Identities = 61/275 (22%), Positives = 109/275 (39%), Gaps = 46/275 (16%) Query: 16 VEKYRPE-TLDEVYGQNEVITTVRKFV----------DEGKLPHLLFYGPPGTGKTSTIV 64 V K +P+ TL+E+ G +V +++ V G +L YGPPG GKT Sbjct: 4 VMKEKPKVTLNEIVGLEDVKEALKEAVVYPSKRPDLFPLGWPRGILLYGPPGCGKTMIAA 63 Query: 65 ALAREIYGKNYSNMVLELNASDDRGI---DVVRNQIKDFASTRQIFSKG--FKLIILDEA 119 A+A E+ + + ++A+ + +N K F + R++ K +I +DE Sbjct: 64 AVANEL-----DSEFIHVDAASIMSKWLGEAEKNVAKIFKTARELSKKENKPAIIFIDEL 118 Query: 120 DAMTNAAQNALR---RVIERYTK------------NTRFCVLANYAHKLTPALLSRCTRF 164 DA+ + + + RV ++ K N +L L R + Sbjct: 119 DALLASYTSEVGGEARVRNQFLKEMDGLADKNEISKVYVIGATNKPWRLDEPFLRRFQKR 178 Query: 165 RFQPLPQEAIERRIANVLVHEKLKLSPNA-EKALIELSNG----DMRRVLNVLQSCKA-- 217 + LP +A + K+KL PN + L EL++G D+R ++ Sbjct: 179 IYITLPDKAHRLELLK-HYSSKVKLDPNVNLEELAELTDGYTASDIRDIVQSAHMRVVKE 237 Query: 218 --TLDNPDEDEISDDVIYECCGAPRPSDLKAVLKS 250 + + I+ D E +PS + +LK+ Sbjct: 238 MFEKNLQEPRAINMDDFREVLKVRKPSVNQDMLKA 272 >2X8A-A nrPDB Length = 274 Score = 80.6 bits (197), Expect = 8e-16, Method: Composition-based stats. Identities = 46/238 (19%), Positives = 80/238 (33%), Gaps = 33/238 (13%) Query: 48 HLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFAST-RQI 106 +L GPPG GKT A+A E LN +G +++ + + RQ+ Sbjct: 46 GVLLAGPPGCGKTLLAKAVANESG----------LNFISVKGPELLNMYVGESERAVRQV 95 Query: 107 F----SKGFKLIILDEADAM----TNAAQNALRRVIERY---------TKNTRFCVLANY 149 F + +I DE DA+ ++ A RV+ + + N Sbjct: 96 FQRAKNSAPCVIFFDEVDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNR 155 Query: 150 AHKLTPALL--SRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNGDMRR 207 + PA+L R + F LP A I + K P +E GD+R Sbjct: 156 PDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTK-PPLDADVNLEAIAGDLRC 214 Query: 208 VLNVLQSCKATLDNPDEDEISDDVIYECCGAPRPSDLKAVLKSILEDDWGTAHYTLNK 265 A + + ++ + G + V E+ + +++K Sbjct: 215 DCYTGADLSALVREASICALRQEMARQKSGNEKGEL--KVSHKHFEEAFKKVRSSISK 270 >4LCB-A nrPDB Length = 367 Score = 80.2 bits (196), Expect = 1e-15, Method: Composition-based stats. Identities = 53/284 (18%), Positives = 107/284 (37%), Gaps = 45/284 (15%) Query: 6 EKRSKENLPWVEKYRPE-TLDEVYGQNEVITTVRKFV----------DEGKLPHLLFYGP 54 + K + + K +P+ + ++ G ++V +++ + G +L YGP Sbjct: 79 DNSQKTDDELIMKEKPKVSFSDIVGLDDVKEALKEAIIYPSKRPDLFPLGWPRGILLYGP 138 Query: 55 PGTGKTSTIVALAREIYG----KNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKG 110 PG GKT A+A EI + ++++ + ++ + +I + A Sbjct: 139 PGNGKTMLAAAVANEIDSYFIHVDAASIMSKWLGEAEKNVA----KIFNTAREYSKKDNK 194 Query: 111 FKLIILDEADAMTN---AAQNALRRVIERYTKNTRFCV------------LANYAHKLTP 155 +I +DE DA+ + RV ++ K + N +L Sbjct: 195 PAIIFVDEIDALLGTYTSEVGGEVRVRNQFLKEMDGIMDKNENYMVYVIGATNKPWRLDE 254 Query: 156 ALLSRCTRFRFQPLPQEAIERRIA-NVLVHEKLKLSPNAEKALIELSNG----DMRRVLN 210 L R + + PLP +R+A K+KL + L +++ G D+R ++ Sbjct: 255 PFLRRFQKRIYVPLP--DFNQRLALFKYYTSKVKLGNVDLQELAKMTEGYSASDIRDIVQ 312 Query: 211 VLQSCKA----TLDNPDEDEISDDVIYECCGAPRPSDLKAVLKS 250 + + EI+ D E +PS + +LK+ Sbjct: 313 SAHMRVVKEMFEKNLSEPREITMDDFKEVLKIRKPSVNQELLKA 356 >6EF0-H nrPDB Length = 257 Score = 78.7 bits (192), Expect = 4e-15, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 67/199 (33%), Gaps = 46/199 (23%) Query: 23 TLDEVYGQNEVITTVRKFVDEGKL-------------PHLLFYGPPGTGKTSTIVALARE 69 T +V G + I +R+ V+ L +L YGPPGTGKT A+A Sbjct: 7 TYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVANR 66 Query: 70 IYGKNYSNMVLELNASDDRGIDVVRNQIKDFAS-TRQIFSKGFK----LIILDEADAMT- 123 + G ++V+ + + A R++F +I DE DA+ Sbjct: 67 TDATFIRVI----------GSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGG 116 Query: 124 -------NAAQNALRRVIERYTK--------NTRFCVLANYAHKLTPALL--SRCTRFRF 166 R ++E T+ N + N + L PALL R R Sbjct: 117 ARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVE 176 Query: 167 QPLPQEAIERRIANVLVHE 185 LP I + Sbjct: 177 FSLPDLEGRANIFRIHSKS 195 >1LV7-A nrPDB Length = 257 Score = 78.3 bits (191), Expect = 4e-15, Method: Composition-based stats. Identities = 50/212 (23%), Positives = 77/212 (36%), Gaps = 46/212 (21%) Query: 22 ETLDEVYGQNEVITTVRKFVDE-----------GKLP-HLLFYGPPGTGKTSTIVALARE 69 T +V G +E V + V+ GK+P +L GPPGTGKT A+A E Sbjct: 9 TTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGE 68 Query: 70 IYGKNYSNMVLELNASDDRGIDVVRNQIKDFA-STRQIFSKGFK----LIILDEADAMTN 124 ++ G D V + A R +F + K +I +DE DA+ Sbjct: 69 AKVPFFT----------ISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGR 118 Query: 125 AAQNALR-------RVIER---------YTKNTRFCVLANYAHKLTPALL--SRCTRFRF 166 L + + + + N L PALL R R Sbjct: 119 QRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVV 178 Query: 167 QPLPQEAIERRIANVLVHEKLKLSPNAEKALI 198 LP +I V + ++ L+P+ + A+I Sbjct: 179 VGLPDVRGREQILKVHM-RRVPLAPDIDAAII 209 >6EF3-H nrPDB Length = 467 Score = 77.6 bits (189), Expect = 6e-15, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 75/228 (32%), Gaps = 60/228 (26%) Query: 8 RSKEN--LPWVEKYRPE------------TLDEVYGQNEVITTVRKFVDEGKL------- 46 RSK N LP + P T +V G + I +R+ V+ L Sbjct: 178 RSKYNIELPLPPRIDPSVTMMTVEEKPDVTYSDVGGCKDQIEKLREVVELPLLSPERFAT 237 Query: 47 ------PHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDF 100 +L YGPPGTGKT A+A + G ++V+ + + Sbjct: 238 LGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVI----------GSELVQKYVGEG 287 Query: 101 AS-TRQIFSKGFK----LIILDEADAMT--------NAAQNALRRVIERYTK-------- 139 A R++F +I DE DA+ R ++E T+ Sbjct: 288 ARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDPRG 347 Query: 140 NTRFCVLANYAHKLTPALL--SRCTRFRFQPLPQEAIERRIANVLVHE 185 N + N + L PALL R R LP I + Sbjct: 348 NIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIFRIHSKS 395 >2CE7-A nrPDB Length = 476 Score = 77.6 bits (189), Expect = 7e-15, Method: Composition-based stats. Identities = 53/271 (19%), Positives = 91/271 (33%), Gaps = 52/271 (19%) Query: 19 YRPE-----TLDEVYGQNEVITTVRKFVDEGKLPH------------LLFYGPPGTGKTS 61 Y+P T +V G E I +++ V+ K P +L GPPGTGKT Sbjct: 5 YKPSGNKRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTL 64 Query: 62 TIVALAREIYGKNY---SNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDE 118 A+A E + + +EL G VR+ FA + + ++ +DE Sbjct: 65 LARAVAGEANVPFFHISGSDFVELFVGV--GAARVRDL---FAQAK---AHAPCIVFIDE 116 Query: 119 ADAMTNAAQNALR-------RVIERY---------TKNTRFCVLANYAHKLTPALL--SR 160 DA+ L + + + + N L PALL R Sbjct: 117 IDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFDSKEGIIVMAATNRPDILDPALLRPGR 176 Query: 161 CTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNG----DMRRVLNV--LQS 214 + P ++I + K + + + + G D+ ++N L + Sbjct: 177 FDKKIVVDPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLA 236 Query: 215 CKATLDNPDEDEISDDVIYECCGAPRPSDLK 245 + D + + + G R S L Sbjct: 237 AREGRDKITMKDFEEAIDRVIAGPARKSLLI 267 >3D8B-A nrPDB Length = 357 Score = 74.9 bits (182), Expect = 4e-14, Method: Composition-based stats. Identities = 46/253 (18%), Positives = 95/253 (37%), Gaps = 43/253 (16%) Query: 21 PETLDEVYGQNEVITTVRKFVDEGKLP------------HLLFYGPPGTGKTSTIVALAR 68 P +++ G T+++ V L +L +GPPGTGKT +A Sbjct: 80 PVNWEDIAGVEFAKATIKEIVVWPMLRPDIFTGLRGPPKGILLFGPPGTGKTLIGKCIAS 139 Query: 69 E----IYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAM-- 122 + + + S++ + ++ + + FA R + +I +DE D++ Sbjct: 140 QSGATFFSISASSLTSKWVGEGEKMVRAL------FAVAR---CQQPAVIFIDEIDSLLS 190 Query: 123 --TNAAQNALRRVIERY---------TKNTRFCV--LANYAHKLTPALLSRCTRFRFQPL 169 + + RR+ + + R V N ++ A R + + PL Sbjct: 191 QRGDGEHESSRRIKTEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARRRLVKRLYIPL 250 Query: 170 PQEAIERRI-ANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEIS 228 P+ + ++I N++ E+ LS + +++ S D ++ Q C+ P + Sbjct: 251 PEASARKQIVINLMSKEQCCLSEEEIEQIVQQS--DAFSGADMTQLCREASLGPIRSLQT 308 Query: 229 DDVIYECCGAPRP 241 D+ RP Sbjct: 309 ADIATITPDQVRP 321 >3JCP-I nrPDB Length = 437 Score = 74.9 bits (182), Expect = 5e-14, Method: Composition-based stats. Identities = 46/275 (16%), Positives = 93/275 (33%), Gaps = 49/275 (17%) Query: 16 VEKYRPETLDEVYGQNEVITTVRKFVDEGKLP-------------HLLFYGPPGTGKTST 62 ++K E+ ++ G I +++ V+ ++ YG PGTGKT Sbjct: 173 MDKSPTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLL 232 Query: 63 IVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFAST-RQIF----SKGFKLIILD 117 A+A + + G ++++ + D RQIF ++ +D Sbjct: 233 AKAVANQTSATFLRIV----------GSELIQKYLGDGPRLCRQIFKVAGENAPSIVFID 282 Query: 118 EADAMTN-------AAQNALRRVIERY---------TKNTRFCVLANYAHKLTPALL--S 159 E DA+ + ++R + + + + N L PAL+ Sbjct: 283 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPG 342 Query: 160 RCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATL 219 R R P + +++I + K+ LS + + + D+ +Q+ Sbjct: 343 RIDRKILFENPDLSTKKKILGIHT-SKMNLSEDVNLETLVTTKDDLSGA--DIQAMCTEA 399 Query: 220 DNPDEDEISDDVIYECCGAPRPSDLKAVLKSILED 254 E V E + +K ++ LE Sbjct: 400 GLLALRERRMQVTAEDFKQAKERVMKNKVEENLEG 434 >6FVU-I nrPDB Length = 384 Score = 74.1 bits (180), Expect = 9e-14, Method: Composition-based stats. Identities = 43/240 (17%), Positives = 83/240 (34%), Gaps = 38/240 (15%) Query: 40 FVDEGKLP--HLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQI 97 + + G P ++ YG PGTGKT A+A + + G ++++ + Sbjct: 155 YEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIV----------GSELIQKYL 204 Query: 98 KDFAST-RQIF----SKGFKLIILDEADAMTN-------AAQNALRRVIERY-------- 137 D RQIF ++ +DE DA+ + ++R + Sbjct: 205 GDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFD 264 Query: 138 -TKNTRFCVLANYAHKLTPALL--SRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAE 194 + + + N L PAL+ R R P + +++I + K+ LS + Sbjct: 265 DRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDLSTKKKILGIHT-SKMNLSEDVN 323 Query: 195 KALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYECCGAPRPSDLKAVLKSILED 254 + + D+ +Q+ E V E + +K ++ LE Sbjct: 324 LETLVTTKDDLSGA--DIQAMCTEAGLLALRERRMQVTAEDFKQAKERVMKNKVEENLEG 381 >4Z8X-A nrPDB Length = 497 Score = 73.7 bits (179), Expect = 1e-13, Method: Composition-based stats. Identities = 43/191 (22%), Positives = 59/191 (30%), Gaps = 36/191 (18%) Query: 39 KFVDEGKLP--HLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQ 96 KF G P +L YG PG GKT A+A E + S G D V Sbjct: 42 KFQKLGGRPPKGVLLYGEPGVGKTLLAKAIAGEAHVPFIS----------VSGSDFVEMF 91 Query: 97 IK-DFASTRQIFSKGFK----LIILDEADAMT--------NAAQNALRRVIERY------ 137 + A R +F K +I +DE DA+ + + + + Sbjct: 92 VGVGAARVRDLFETAKKHAPCMIFIDEIDAVGRARGAIPVGGGHDEREQTLNQLLVEMDG 151 Query: 138 ---TKNTRFCVLANYAHKLTPALL--SRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPN 192 + N L PALL R R F P P I V K Sbjct: 152 FDTSDGIIVIAATNRPDILDPALLRPGRFDRQIFIPKPDVRGRYEILKVHARNKKLAKDV 211 Query: 193 AEKALIELSNG 203 + + + G Sbjct: 212 DLEFVARATPG 222 >6EF1-I nrPDB Length = 271 Score = 72.9 bits (177), Expect = 2e-13, Method: Composition-based stats. Identities = 46/275 (16%), Positives = 93/275 (33%), Gaps = 49/275 (17%) Query: 16 VEKYRPETLDEVYGQNEVITTVRKFVDEGKLP-------------HLLFYGPPGTGKTST 62 ++K E+ ++ G I +++ V+ ++ YG PGTGKT Sbjct: 7 MDKSPTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLL 66 Query: 63 IVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFAST-RQIF----SKGFKLIILD 117 A+A + + G ++++ + D RQIF ++ +D Sbjct: 67 AKAVANQTSATFLRIV----------GSELIQKYLGDGPRLCRQIFKVAGENAPSIVFID 116 Query: 118 EADAMTN-------AAQNALRRVIERY---------TKNTRFCVLANYAHKLTPALL--S 159 E DA+ + ++R + + + + N L PAL+ Sbjct: 117 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPG 176 Query: 160 RCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATL 219 R R P + +++I + K+ LS + + + D+ +Q+ Sbjct: 177 RIDRKILFENPDLSTKKKILGIHT-SKMNLSEDVNLETLVTTKDDLSGA--DIQAMCTEA 233 Query: 220 DNPDEDEISDDVIYECCGAPRPSDLKAVLKSILED 254 E V E + +K ++ LE Sbjct: 234 GLLALRERRMQVTAEDFKQAKERVMKNKVEENLEG 268 >6AP1-A nrPDB Length = 519 Score = 72.5 bits (176), Expect = 2e-13, Method: Composition-based stats. Identities = 49/226 (21%), Positives = 79/226 (34%), Gaps = 51/226 (22%) Query: 10 KENLPWVEKYRPETLDEVYGQNEVITTVRKFVDEG-KLPHL-----------LFYGPPGT 57 K N+ W ++V G +++ V K PHL L YGPPGT Sbjct: 28 KPNVKW---------EDVAGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGT 78 Query: 58 GKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFAS-TRQIFSKGF----K 112 GK+ A+A E +S D+V + + +Q+F+ Sbjct: 79 GKSYLAKAVATEANSTFFS----------VSSSDLVSKWMGESEKLVKQLFAMARENKPS 128 Query: 113 LIILDEADAMTN----AAQNALRRVIERY----------TKNTRFCVLANYAHKLTPALL 158 +I +DE DA+T A RR+ ++ N +L A+ Sbjct: 129 IIFIDEVDALTGTRGEGESEASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQLDSAIR 188 Query: 159 SRCTRFRFQPLPQEAIERRIANVLV-HEKLKLSPNAEKALIELSNG 203 R R + PLP A + + V L+ + L ++ G Sbjct: 189 RRFERRIYIPLPDLAARTTMFEINVGDTPCVLTKEDYRTLGAMTEG 234 >5Z6Q-A nrPDB Length = 392 Score = 72.5 bits (176), Expect = 3e-13, Method: Composition-based stats. Identities = 53/264 (20%), Positives = 89/264 (33%), Gaps = 42/264 (15%) Query: 24 LDEVYGQNEVITTVRKFVDEGKLP------------HLLFYGPPGTGKTSTIVALAREIY 71 D++ GQ+ +++ V L LL +GPPG GKT A+A E Sbjct: 117 FDDIAGQDLAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESN 176 Query: 72 GKNYSNMVLELNASDD-RGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAM----TNAA 126 ++ L + G +VR FA R++ +I +DE D++ Sbjct: 177 ATFFNISAASLTSKYVGEGEKLVRAL---FAVAREL---QPSIIFIDEVDSLLCERREGE 230 Query: 127 QNALRRVIERYTK-----------NTRFCVLANYAHKLTPALLSRCTRFRFQPLPQEAIE 175 +A RR+ + N +L A+L R + + LP E Sbjct: 231 HDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFIKRVYVSLPNEETR 290 Query: 176 RRIANVLV-HEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYE 234 + L+ + L+ L +++G L L A E+ + + Sbjct: 291 LLLLKNLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPI---RELKPEQVKN 347 Query: 235 CCGA----PRPSDLKAVLKSILED 254 + R SD LK I Sbjct: 348 MSASEMRNIRLSDFTESLKKIKRS 371 >3HU1-A nrPDB Length = 489 Score = 72.2 bits (175), Expect = 3e-13, Method: Composition-based stats. Identities = 38/191 (19%), Positives = 67/191 (35%), Gaps = 30/191 (15%) Query: 47 PHLLFYGPPGTGKTSTIVALAREI----YGKNYSNMVLELNASDDRGIDVVRNQIKDFAS 102 +L YGPPGTGKT A+A E + N ++ +L + +R ++ Sbjct: 239 RGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESN---LRKAFEEAEK 295 Query: 103 TRQIFSKGFKLIILDEADAMT----NAAQNALRRVIERY---------TKNTRFCVLANY 149 +I +DE DA+ RR++ + + N Sbjct: 296 N------APAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNR 349 Query: 150 AHKLTPAL--LSRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNA-EKALIELSNGDMR 206 + + PAL R R +P I + +KL+ + + + ++G + Sbjct: 350 PNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTK-NMKLADDVDLEQVANETHGHVG 408 Query: 207 RVLNVLQSCKA 217 L L S A Sbjct: 409 ADLAALCSEAA 419 >6B5C-A nrPDB Length = 307 Score = 72.2 bits (175), Expect = 3e-13, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 87/256 (33%), Gaps = 38/256 (14%) Query: 48 HLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGI--DVVRNQIKDFASTRQ 105 +L GPPGTGKT A+A E G + N+ S RG +VR + A Sbjct: 60 GVLMVGPPGTGKTMLAKAVATEC-GTTFFNVSSSTLTSKYRGESEKLVRLLF-EMARFY- 116 Query: 106 IFSKGFKLIILDEADAM-----TNAAQNALRRVI----------------ERYTKNTRFC 144 I +D+ D++ T+ A RRV + +K Sbjct: 117 ----APTTIFIDQIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVL 172 Query: 145 VLANYAHKLTPALLSRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNA-EKALIELSNG 203 N+ + AL R + + PLP + + + E ++L P+ + + E G Sbjct: 173 AATNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKINLRE-VELDPDIQLEDIAEKIEG 231 Query: 204 ----DMRRVLN--VLQSCKATLDNPDEDEISDDVIYECCGAPRPSDLKAVLKSILEDDWG 257 D+ V L + + ++ +EI E D + LK I + Sbjct: 232 YSGADITNVCRDASLMAMRRRINGLSPEEIRALSKEELQMPVTKGDFELALKKIAKSVSA 291 Query: 258 TAHYTLNKVRSAKGLA 273 K G A Sbjct: 292 ADLEKYEKWMVEFGSA 307 >4LGM-A nrPDB Length = 295 Score = 71.8 bits (174), Expect = 4e-13, Method: Composition-based stats. Identities = 49/229 (21%), Positives = 88/229 (38%), Gaps = 44/229 (19%) Query: 20 RPE-TLDEVYGQNEVITTVRKFV----------DEGKLPHLLFYGPPGTGKTSTIVALAR 68 +P+ + ++ G ++V +R+ + G +L YGPPG GKT A+A Sbjct: 20 KPKVSFKDIVGLDDVKEALREAIIYPTKRPDLFPLGWPRGILLYGPPGCGKTMIAAAVAN 79 Query: 69 EIYGKNYSNMVLELNASDDRGI---DVVRNQIKDFASTRQIFSK--GFKLIILDEADAMT 123 EI ++ ++L+A+ + +N F R+ K +I +D+ DA+ Sbjct: 80 EI-----DSIFMQLDAASVMSKWLGEAEKNVANVFKMAREESKKQNKPAIIFIDQLDALL 134 Query: 124 N---AAQNALRRVIERYTK------------NTRFCVLANYAHKLTPALLSRCTRFRFQP 168 RV ++ K N +L A L R + + P Sbjct: 135 GVYSTEVGGEARVRNQFLKEMDGLLDKSENYKVYVIGATNKPWRLDEAFLRRFQKRIYVP 194 Query: 169 LPQEAIERRI-ANVLVHEKLKLSPNA-EKALIELSNG----DMRRVLNV 211 LP E+R+ K+KL + L +L+ G D+R ++ Sbjct: 195 LP--DYEQRLSLFKYYTSKIKLDTEVSLEELAKLTEGYTASDIRDIVQA 241 >2R65-A nrPDB Length = 268 Score = 71.8 bits (174), Expect = 4e-13, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 97/252 (38%), Gaps = 52/252 (20%) Query: 23 TLDEVYGQNEVITTVRKFVDEGKLP------------HLLFYGPPGTGKTSTIVALAREI 70 ++ G E V + VD K P +L GPPGTGKT A+A E Sbjct: 9 RFKDMAGNEEAKEEVVEIVDFLKYPERYANLGAKIPKGVLLVGPPGTGKTLLAKAVAGEA 68 Query: 71 YGKNYS---NMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTN--- 124 + +S + +E+ G VR+ + + +I +DE DA+ Sbjct: 69 HVPFFSMGGSSFIEMFVGL--GASRVRDLFETAKK------QAPSIIFIDEIDAIGKSRA 120 Query: 125 -----AAQNALRRVIERY--------TKNTRFCV--LANYAHKLTPALLSRCTRF-RFQP 168 + + + + + ++N V N L PAL+ R RF R Sbjct: 121 AGGVVSGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALM-RPGRFDRQVL 179 Query: 169 LPQEAIERRIANVLVH-EKLKLSPNA-EKALIELSNG----DMRRVLNVLQSCKATLDNP 222 + + R+ + VH + +KL+ + + + +L+ G D+ ++N ++ N Sbjct: 180 VDKPDFNGRVEILKVHIKGVKLANDVNLQEVAKLTAGLAGADLANIIN--EAALLAGRN- 236 Query: 223 DEDEISDDVIYE 234 ++ E+ + E Sbjct: 237 NQKEVRQQHLKE 248 >3EIH-A nrPDB Length = 340 Score = 70.2 bits (170), Expect = 1e-12, Method: Composition-based stats. Identities = 48/226 (21%), Positives = 79/226 (34%), Gaps = 51/226 (22%) Query: 10 KENLPWVEKYRPETLDEVYGQNEVITTVRKFVDEG-KLPHL-----------LFYGPPGT 57 K N+ W ++V G +++ V K PHL L YGPPGT Sbjct: 30 KPNVKW---------EDVAGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGT 80 Query: 58 GKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFAS-TRQIFSKGF----K 112 GK+ A+A E +S D+V + + +Q+F+ Sbjct: 81 GKSYLAKAVATEANSTFFS----------VSSSDLVSKWMGESEKLVKQLFAMARENKPS 130 Query: 113 LIILDEADAMTN----AAQNALRRVIERY----------TKNTRFCVLANYAHKLTPALL 158 +I +D+ DA+T A RR+ ++ N +L A+ Sbjct: 131 IIFIDQVDALTGTRGEGESEASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQLDSAIR 190 Query: 159 SRCTRFRFQPLPQEAIERRIANVLV-HEKLKLSPNAEKALIELSNG 203 R R + PLP A + + V L+ + L ++ G Sbjct: 191 RRFERRIYIPLPDLAARTTMFEINVGDTPCVLTKEDYRTLGAMTEG 236 >6B5D-A nrPDB Length = 309 Score = 70.2 bits (170), Expect = 1e-12, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 71/210 (33%), Gaps = 34/210 (16%) Query: 23 TLDEVYGQNEVITTVRKFVDEGKL------------PHLLFYGPPGTGKTSTIVALAREI 70 +LD++ G ++V + + V L ++ GPPGTGKT A+A E Sbjct: 28 SLDDIIGMHDVKQVLHEAVTLPLLVPEFFQGLRSPWKAMVLAGPPGTGKTLIARAIASES 87 Query: 71 YGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTN-----A 125 ++ +L++ + + + + A +I +DE D + Sbjct: 88 SSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFY-----APSIIFIDEIDTLGGQRGNSG 142 Query: 126 AQNALRRVIERY------------TKNTRFCVLANYAHKLTPALLSRCTRFRFQPLPQEA 173 A RRV + ++ N +L AL R + F PLP Sbjct: 143 EHEASRRVKSEFLVQMDGSQNKFDSRRVFVLAATNIPWELDEALRRRFEKRIFIPLPDID 202 Query: 174 IERRIANVLVHEKLKLSPNAEKALIELSNG 203 +++ + K L + G Sbjct: 203 ARKKLIEKSMEGTPKSDEINYDDLAARTEG 232 >6NYV-B nrPDB Length = 314 Score = 69.8 bits (169), Expect = 2e-12, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 77/211 (36%), Gaps = 42/211 (19%) Query: 26 EVYGQNEVITTVRKFVDEGKLP------------HLLFYGPPGTGKTSTIVALAREIYGK 73 ++ GQ+ +++ V + LL +GPPG GKT A+A E Sbjct: 40 DIAGQDVAKQALQEMVILPSVRPELFTGLRAPAKGLLLFGPPGNGKTLLARAVATECSAT 99 Query: 74 ----NYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEAD----AMTNA 125 + +++ + ++ + + FA R + +I +DE D +++ Sbjct: 100 FLNISAASLTSKYVGDGEKLVRAL------FAVARHM---QPSIIFIDEVDSLLSERSSS 150 Query: 126 AQNALRRVIERYT------------KNTRFCVLANYAHKLTPALLSRCTRFRFQPLPQEA 173 A RR+ + N +L A L R T+ + LP E Sbjct: 151 EHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDEQ 210 Query: 174 IERRIAN-VLVHEKLKLSPNAEKALIELSNG 203 + N +L + L A + L ++++G Sbjct: 211 TRELLLNRLLQKQGSPLDTEALRRLAKITDG 241 >5E7P-A nrPDB Length = 745 Score = 69.1 bits (167), Expect = 2e-12, Method: Composition-based stats. Identities = 38/162 (23%), Positives = 55/162 (33%), Gaps = 31/162 (19%) Query: 40 FVDEGKLP--HLLFYGPPGTGKTSTIVALAR----EIYGKNYSNMVLELNASDDRGIDVV 93 F G P +L YGPPG GKT + ALA ++ S ++ + S ++ + + Sbjct: 511 FSRLGIDPPRGVLLYGPPGCGKTFVVRALASSGRLSVHAVKGSELMDKWVGSSEKAVREL 570 Query: 94 RNQIKDFASTRQIFSKGFKLIILDEADAMTNAAQNALRRVIE--------------RYTK 139 FA R L+ LDE DA+ + + Sbjct: 571 ------FARAR---DSAPSLVFLDEIDALAPRRGQNFDSGVTDKVVASLLTELDGIEPLR 621 Query: 140 NTRFCVLANYAHKLTPALL--SRCTRFRFQPLPQEAIERRIA 179 + N + PALL R R F P A R I Sbjct: 622 DVVVLGATNRPDLIDPALLRPGRLERLVFVEPPDAAARRDIL 663 Score = 37.5 bits (85), Expect = 0.008, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 60/176 (34%), Gaps = 24/176 (13%) Query: 43 EGKLPHL--LFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDF 100 G PHL L GP G GK + + A+ S V+EL+ + G V +++ Sbjct: 258 LGATPHLGVLVSGPAGVGKATMVRAVC-------ASRRVVELDGPEV-GALQVDERLRSV 309 Query: 101 ASTRQIFSKGFKLIILDEADAMTNAAQN-------ALRRVIER----YTKNTRFCVLANY 149 S ++ ++ + + DA+ A A + E T F + Sbjct: 310 TSAVAAVTESGGVLFIADVDALLPAGNEMRPPEPVATLILAELRKAVATPGVAFIATSAV 369 Query: 150 AHKLTPALLSR--CTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNG 203 + L + C R LP R + +L+ + + + + G Sbjct: 370 PENVDARLRAPEVCDRELGLSLPDATARRSLLEMLL-RGVPSEDLDLGDIADHTPG 424 >5XMK-A nrPDB Length = 437 Score = 69.1 bits (167), Expect = 3e-12, Method: Composition-based stats. Identities = 48/226 (21%), Positives = 79/226 (34%), Gaps = 51/226 (22%) Query: 10 KENLPWVEKYRPETLDEVYGQNEVITTVRKFVDEG-KLPHL-----------LFYGPPGT 57 K N+ W ++V G +++ V K PHL L YGPPGT Sbjct: 127 KPNVKW---------EDVAGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGT 177 Query: 58 GKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFAS-TRQIFSKGF----K 112 GK+ A+A E +S D+V + + +Q+F+ Sbjct: 178 GKSYLAKAVATEANSTFFS----------VSSSDLVSKWMGESEKLVKQLFAMARENKPS 227 Query: 113 LIILDEADAMTN----AAQNALRRVIERY----------TKNTRFCVLANYAHKLTPALL 158 +I +D+ DA+T A RR+ ++ N +L A+ Sbjct: 228 IIFIDQVDALTGTRGEGESEASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQLDSAIR 287 Query: 159 SRCTRFRFQPLPQEAIERRIANVLV-HEKLKLSPNAEKALIELSNG 203 R R + PLP A + + V L+ + L ++ G Sbjct: 288 RRFERRIYIPLPDLAARTTMFEINVGDTPCVLTKEDYRTLGAMTEG 333 >5ZQM-A nrPDB Length = 309 Score = 68.3 bits (165), Expect = 4e-12, Method: Composition-based stats. Identities = 43/234 (18%), Positives = 77/234 (32%), Gaps = 32/234 (13%) Query: 48 HLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIF 107 +L GPPGTGKT A+A E ++ L + + + + + A Sbjct: 64 GVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYS-- 121 Query: 108 SKGFKLIILDEADAM-----TNAAQNALRRVI----------------ERYTKNTRFCVL 146 I +DE D++ T+ A RRV + +K Sbjct: 122 ---PATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAA 178 Query: 147 ANYAHKLTPALLSRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNG--- 203 N+ + AL R + + PLP + + + E ++ E G Sbjct: 179 TNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRISLRELELADDVDLASIAENMEGYSG 238 Query: 204 -DMRRVLN--VLQSCKATLDNPDEDEISDDVIYECCGAPRPSDLKAVLKSILED 254 D+ V L + + ++ +EI + E D + LK + + Sbjct: 239 ADITNVCRDASLMAMRRRIEGLTPEEIRNLSKEEMHMPTTMEDFEMALKKVSKS 292 >5UBV-A nrPDB Length = 246 Score = 68.3 bits (165), Expect = 5e-12, Method: Composition-based stats. Identities = 48/195 (24%), Positives = 82/195 (42%), Gaps = 29/195 (14%) Query: 31 NEVITTVRKFVDE----GKLP-HLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELN-A 84 E++ +R GKLP +L GPPGTGKT A+A E + E + Sbjct: 19 QELVEFLRNPEKFSNLGGKLPKGVLLVGPPGTGKTLLARAVAGEAGVPFFYMSGSEFDEI 78 Query: 85 SDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTN--AAQNA--LRRVIER---- 136 G VR + A K ++ +DE DA+ +++A +R+ + + Sbjct: 79 YVGVGAKRVRELF-NAAKA-----KAPSIVFIDELDAIGGRRNSRDATYVRQTLNQLLTE 132 Query: 137 ---YTKNTRFCV--LANYAHKLTPALLSRCTRF-RFQPLPQEAIERRIANVLVH-EKLKL 189 + +N+ + N+ L AL +R RF R + + RIA + H +K+K+ Sbjct: 133 MDGFAQNSGVIILGATNFPESLDKAL-TRPGRFDRHVHVSLPDVRGRIAILKHHAKKIKI 191 Query: 190 -SPNAEKALIELSNG 203 S A+ ++G Sbjct: 192 GSDVNIAAIAARTSG 206 >6MDP-A nrPDB Length = 768 Score = 67.9 bits (164), Expect = 5e-12, Method: Composition-based stats. Identities = 47/284 (16%), Positives = 96/284 (33%), Gaps = 33/284 (11%) Query: 44 GKLPHLLFYGPPGTGKTSTIVAL-----AREIYGKNYSNMVLELNASDDRGI-DVVRNQI 97 + +L YGPPG GKT + ARE N ++ + + I + + Sbjct: 275 KHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAE 334 Query: 98 KDFASTRQIFSKGFKLIILDEADAMTN------AAQNALRRVIERYTK---------NTR 142 ++ R + G +II DE DA+ + V+ + N Sbjct: 335 EE--QRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNIL 392 Query: 143 FCVLANYAHKLTPALL--SRCTRFRFQPLPQEAIERRIANVLV-----HEKLKLSPNAEK 195 + N + ALL R LP E +I ++ H+ L + ++ Sbjct: 393 VIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKE 452 Query: 196 ALIELSNGDMRRVLNVLQSC-KATLDNPDEDEISDDVIYECCGAPRPS--DLKAVLKSIL 252 +E N + ++++ ++ +V E + + + D A L++ + Sbjct: 453 LAVETKNFSGAELEGLVRAAQSTAMNRHIIASTKVEVDMEKAESLQVTRGDFLASLENDI 512 Query: 253 EDDWGTAHYTLNKVRSAKGLALIDLIEGIVKILEDYELQNEETR 296 + +GT + D + ++ E Q + + Sbjct: 513 KPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSD 556 Score = 30.6 bits (67), Expect = 0.94, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 12/79 (15%) Query: 48 HLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIF 107 +L GPP +GKT+ +A E SN S D+ I + ++IF Sbjct: 562 SVLLEGPPHSGKTALAAKIAEE------SNFPFIKICSPDKMIGFSETA--KCQAMKKIF 613 Query: 108 SKGFK----LIILDEADAM 122 +K +++D+ + + Sbjct: 614 DDAYKSQLSCVVVDDIERL 632 >1IY1-A nrPDB Length = 254 Score = 67.9 bits (164), Expect = 6e-12, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 66/199 (33%), Gaps = 38/199 (19%) Query: 33 VITTVRKFVDE----GKLP-HLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDD 87 ++ ++ ++P +L GPPG GKT A+A E V + AS Sbjct: 31 IVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGE-------ARVPFITAS-- 81 Query: 88 RGIDVVRNQIK-DFASTRQIFS----KGFKLIILDEADAMTNAAQNA------------- 129 G D V + A R +F ++ +DE DA+ + Sbjct: 82 -GSDFVEMFVGVGAARVRDLFETAKRHAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLN 140 Query: 130 -LRRVIERYTKNTRFCV--LANYAHKLTPALL--SRCTRFRFQPLPQEAIERRIANVLVH 184 L ++ + K+T V N L PALL R R P +I + Sbjct: 141 QLLVEMDGFEKDTAIVVMAATNRPDILDPALLRPGRFDRQIAIDAPDVKGREQILRIHAR 200 Query: 185 EKLKLSPNAEKALIELSNG 203 K L + + G Sbjct: 201 GKPLAEDVDLALLAKRTPG 219 >5WC0-A nrPDB Length = 472 Score = 67.5 bits (163), Expect = 7e-12, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 71/210 (33%), Gaps = 34/210 (16%) Query: 23 TLDEVYGQNEVITTVRKFVDEGKL------------PHLLFYGPPGTGKTSTIVALAREI 70 +LD++ G ++V + + V L ++ GPPGTGKT A+A E Sbjct: 191 SLDDIIGMHDVKQVLHEAVTLPLLVPEFFQGLRSPWKAMVLAGPPGTGKTLIARAIASES 250 Query: 71 YGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTN-----A 125 ++ +L++ + + + + A +I +D+ D + Sbjct: 251 SSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFY-----APSIIFIDQIDTLGGQRGNSG 305 Query: 126 AQNALRRVIERY------------TKNTRFCVLANYAHKLTPALLSRCTRFRFQPLPQEA 173 A RRV + ++ N +L AL R + F PLP Sbjct: 306 EHEASRRVKSEFLVQMDGSQNKFDSRRVFVLAATNIPWELDEALRRRFEKRIFIPLPDID 365 Query: 174 IERRIANVLVHEKLKLSPNAEKALIELSNG 203 +++ + K L + G Sbjct: 366 ARKKLIEKSMEGTPKSDEINYDDLAARTEG 395 >3PFI-A nrPDB Length = 338 Score = 67.5 bits (163), Expect = 8e-12, Method: Composition-based stats. Identities = 45/239 (18%), Positives = 80/239 (33%), Gaps = 37/239 (15%) Query: 20 RPETLDEVYGQNEVITTVRKFVDEGK-----LPHLLFYGPPGTGKTSTIVALAREIYGKN 74 RP D GQ + + F+ K L H+LF GP G GKT+ ++ Sbjct: 24 RPSNFDGYIGQESIKKNLNVFIAAAKKRNECLDHILFSGPAGLGKTTLANIIS------- 76 Query: 75 YSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNAAQNALRRVI 134 E++A+ + + D A+ S+G ++ +DE ++ A + L + Sbjct: 77 -----YEMSANIKTTAAPMIEKSGDLAAILTNLSEG-DILFIDEIHRLSPAIEEVLYPAM 130 Query: 135 ERYT------------------KNTRFCVLANYAHKLTPALLSRCT-RFRFQPLPQEAIE 175 E Y A L+ L R +FR + + Sbjct: 131 EDYRLDIIIGSGPAAQTIKIDLPKFTLIGATTRAGMLSNPLRDRFGMQFRLEFYKDSELA 190 Query: 176 RRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYE 234 + + A + + S R L +L+ + D DE+ I++ E Sbjct: 191 LILQKAALKLNKTCEEKAALEIAKRSRSTPRIALRLLKRVRDFADVNDEEIITEKRANE 249 >2DHR-A nrPDB Length = 499 Score = 66.8 bits (161), Expect = 1e-11, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 66/199 (33%), Gaps = 38/199 (19%) Query: 33 VITTVRKFVDE----GKLP-HLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDD 87 ++ ++ ++P +L GPPG GKT A+A E V + AS Sbjct: 46 IVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGE-------ARVPFITAS-- 96 Query: 88 RGIDVVRNQIK-DFASTRQIFS----KGFKLIILDEADAMTNAAQNA------------- 129 G D V + A R +F ++ +DE DA+ + Sbjct: 97 -GSDFVEMFVGVGAARVRDLFETAKRHAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLN 155 Query: 130 -LRRVIERYTKNTRFCV--LANYAHKLTPALL--SRCTRFRFQPLPQEAIERRIANVLVH 184 L ++ + K+T V N L PALL R R P +I + Sbjct: 156 QLLVEMDGFEKDTAIVVMAATNRPDILDPALLRPGRFDRQIAIDAPDVKGREQILRIHAR 215 Query: 185 EKLKLSPNAEKALIELSNG 203 K L + + G Sbjct: 216 GKPLAEDVDLALLAKRTPG 234 >6AZ0-A nrPDB Length = 439 Score = 65.6 bits (158), Expect = 3e-11, Method: Composition-based stats. Identities = 50/204 (24%), Positives = 80/204 (39%), Gaps = 37/204 (18%) Query: 24 LDEVYGQNEVITTVRKFVDE-----------GKLP-HLLFYGPPGTGKTSTIVALAREIY 71 D+V G +E + + VD GKLP +L GPPGTGKT A A E Sbjct: 2 FDDVCGCDEARAELEEIVDFLKDPTKYESLGGKLPKGVLLTGPPGTGKTLLARATAGEAG 61 Query: 72 GKNYSNMVLELNASDDR-GIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTN----AA 126 + E + G +R+ FA R S+ +I +D+ DA+ Sbjct: 62 VDFFFMSGSEFDEVYVGVGAKRIRDL---FAQAR---SRAPAIIFIDQLDAIGGKRNPKD 115 Query: 127 QNALRRVIERY---------TKNTRFCVLANYAHKLTPALLSRCTRF-RFQPLPQEAIER 176 Q ++ + + T N+ L AL +R RF + + + Sbjct: 116 QAYAKQTLNQLLVELDGFSQTSGIIIIGATNFPEALDKAL-TRPGRFDKVVNVDLPDVRG 174 Query: 177 RIANVLVH--EKLKLSPNAEKALI 198 R A++L H +K+ L+ N + +I Sbjct: 175 R-ADILKHHMKKITLADNVDPTII 197 >1XWI-A nrPDB Length = 322 Score = 64.8 bits (156), Expect = 5e-11, Method: Composition-based stats. Identities = 40/217 (18%), Positives = 75/217 (34%), Gaps = 42/217 (19%) Query: 20 RPET-LDEVYGQNEVITTVRKFVDEG-KLPHL-----------LFYGPPGTGKTSTIVAL 66 RP +V G +++ V K PHL L +GPPGTGK+ A+ Sbjct: 6 RPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV 65 Query: 67 AREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFAS-TRQIF----SKGFKLIILDEADA 121 A E + ++ D+V + + + +F +I +DE D+ Sbjct: 66 ATEANNSTFFSI---------SSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDS 116 Query: 122 MTNA-----AQNALRRVIERYTK---------NTRFCVLANYAHKLTPALLSRCTRFRFQ 167 + + ++ A R E + N L A+ R + + Sbjct: 117 LCGSRSENESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRRRFEKRIYI 176 Query: 168 PLPQEAIERRIANVLV-HEKLKLSPNAEKALIELSNG 203 PLP+ + + + + L+ + L ++G Sbjct: 177 PLPEPHARAAMFKLHLGTTQNSLTEADFRELGRKTDG 213 >5W0T-A nrPDB Length = 304 Score = 64.5 bits (155), Expect = 6e-11, Method: Composition-based stats. Identities = 39/214 (18%), Positives = 74/214 (34%), Gaps = 33/214 (15%) Query: 48 HLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQ-I 106 +L YGPPG GKT ALA+E G N+ ++ R ++ + + Sbjct: 79 GVLLYGPPGCGKTMLAKALAKE-SGANFISI---------RMSSIMDKWYGESNKIVDAM 128 Query: 107 FSKGFK----LIILDEADAM-----------TNAAQNALRRVIERYTKNTRFCV--LANY 149 FS K +I +DE D+ T + + + N R + N Sbjct: 129 FSLANKLQPCIIFIDEIDSFLRERSSTDHEVTATLKAEFMTLWDGLLNNGRVMIIGATNR 188 Query: 150 AHKLTPALLSRCTRFRFQPLP-QEAIERRIANVLVHEKLKLSPNAEKALIELSNG----D 204 + + A L R + LP + + ++ +L KL + + + + G D Sbjct: 189 INDIDDAFLRRLPKRFLVSLPGSDQRYKILSVLLKDTKLDEDEFDLQLIADNTKGFSGSD 248 Query: 205 MRRVLNVLQSCKATLDNPDEDEISDDVIYECCGA 238 ++ + A + ++ D + Sbjct: 249 LKELCREAALDAAKEYIKQKRQLIDSGTIDVNDT 282 >4L16-A nrPDB Length = 334 Score = 64.5 bits (155), Expect = 7e-11, Method: Composition-based stats. Identities = 40/223 (17%), Positives = 82/223 (36%), Gaps = 40/223 (17%) Query: 48 HLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFAS-TRQI 106 +L +GPPGTGKT +A + + + + + + R + Sbjct: 91 GVLLFGPPGTGKTMIGRCVASQCKATFF----------NISASSLTSKWVGEGEKLVRAL 140 Query: 107 FS----KGFKLIILDEADAMTNAAQNA---------------LRRVIERYTKNTRFCVLA 147 FS K +I +DE D++ ++ + L V + Sbjct: 141 FSVARLKLPSVIFIDEIDSLLSSRSESEHESSRRIKTEFLVQLDGVNTAPDERLLVLGAT 200 Query: 148 NYAHKLTPALLSRCTRFRFQPLPQEAIERRIAN-VLVHEKLKLSPNAEKALIELSNG--- 203 N +L A R + + LP+ +I +LV + ++ + + + EL++G Sbjct: 201 NRPQELDEAARRRFQKRLYIALPEPESRTQIVQNLLVGTRHDITNHNLERIRELTDGYSG 260 Query: 204 -DMRRVLNV-----LQSCKATLDNPDEDEISDDVIYECCGAPR 240 DMR++ ++ ++ D+D+I + + A R Sbjct: 261 ADMRQLCTEAAMGPIRDIGDDIETIDKDDIRAVTVMDFAEAAR 303 >6MAT-A nrPDB Length = 813 Score = 64.1 bits (154), Expect = 8e-11, Method: Composition-based stats. Identities = 53/287 (18%), Positives = 93/287 (32%), Gaps = 45/287 (15%) Query: 40 FVDEGKLP--HLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQI 97 F G P +L +GPPG GKT A+A E N +G +++ + Sbjct: 527 FTRVGIKPAAGILLWGPPGCGKTLVAKAVANESKA----------NFISIKGPELLNKYV 576 Query: 98 KDFAST-RQIFSKGFK----LIILDEADA--------MTNAAQNALRRVIERY-----TK 139 + RQ+FS+ ++ D+ DA +++A+ + ++ Sbjct: 577 GESERAVRQLFSRAKSSAPCILFFDQMDALVPRRDDSLSDASARVVNTLLTELDGVGDRS 636 Query: 140 NTRFCVLANYAHKLTPALL--SRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKAL 197 N + A+ R + LP +I L +K Sbjct: 637 GIYVIGATNRPDMIDEAIRRPGRLGTSIYVGLPSAEDRVKILKTLYRNTVKAPKKR---- 692 Query: 198 IELSNG---DMRRVLNVLQSCKATLDNPDEDEISDDVIYECCGAPRPSDLKAVLKSILED 254 E +NG DM Q + T D E D GA DL ++++ + Sbjct: 693 -EGTNGEDVDMTDAAAE-QQHQGTTDADLEKVALDLRCTGFSGA----DLGNLMQAAAQA 746 Query: 255 DWGTAHYTLNKVRSAKGLALIDLIEGIVKILEDYELQNEETRVHLLT 301 + + R G + V +ED+E E + + Sbjct: 747 CLERVYTQRQQKRKEGGSVAEEEEIEPVITMEDWEKALNEVKPSVKD 793 Score = 63.3 bits (152), Expect = 1e-10, Method: Composition-based stats. Identities = 47/216 (21%), Positives = 75/216 (34%), Gaps = 32/216 (14%) Query: 48 HLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDV--VRNQIKDFASTRQ 105 +L +GP G GKT+ A+A I G + + G +R+ + Sbjct: 238 GVLLHGPSGCGKTTLAHAIAGSI-GVAFIPVSAPSVIGGTSGESEKNIRDVFDEAIRL-- 294 Query: 106 IFSKGFKLIILDEADAMTNAAQNA-----LRRVIER------------YTKNTRFCVLAN 148 LI LD+ DA+ ++A R V E KN N Sbjct: 295 ----APCLIFLDQIDAIAGRRESANKGMESRIVAEIMNGMDRIRQNTPLGKNVVVLAATN 350 Query: 149 YAHKLTPALLSRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNA-EKALIELSNGDMRR 207 L PA+ R + +P E +I L L L+ + K L +++ G + Sbjct: 351 RPEFLDPAIRRRFSVEIDMGMPSERAREQILRSLT-RDLSLADDINFKELAKMTPGYVGS 409 Query: 208 VLNVLQSCKATLDNPDEDEISDDVIYECCGAPRPSD 243 L + KA + + I D + A P+D Sbjct: 410 DLQYV--VKAAVSESFQANI--DSLLAQARAKHPAD 441 >2QZ4-A nrPDB Length = 262 Score = 64.1 bits (154), Expect = 9e-11, Method: Composition-based stats. Identities = 54/230 (23%), Positives = 82/230 (35%), Gaps = 50/230 (21%) Query: 23 TLDEVYGQNEVITTVRKFVDEGKLP------------HLLFYGPPGTGKTSTIVALAREI 70 + +V G +E VR+FVD K P L GPPG GKT A+A E Sbjct: 4 SFKDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEA 63 Query: 71 ---YGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNA-- 125 + +E+ G VR+ K+ A R ++ +DE DA+ Sbjct: 64 QVPFLAMAGAEFVEVIGGL--GAARVRSLFKE-ARAR-----APCIVYIDEIDAVGKKRS 115 Query: 126 ------AQNALRRVIERY---------TKNTRFCVLANYAHKLTPALL--SRCTRFRFQP 168 + + + + T + N A L AL+ R R F Sbjct: 116 TTMSGFSNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDGALMRPGRLDRHVFID 175 Query: 169 LPQEAIERRIANVLVHEKLKLSPNAE---KALIELSNG----DMRRVLNV 211 LP R I + LKL+ ++ + L EL+ G D+ + N Sbjct: 176 LPTLQERREIFEQHLKS-LKLTQSSTFYSQRLAELTPGFSGADIANICNE 224 >5KWA-A nrPDB Length = 497 Score = 63.3 bits (152), Expect = 1e-10, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 54/159 (33%), Gaps = 30/159 (18%) Query: 48 HLLFYGPPGTGKTSTIVALAREI---YGKNYSNMVLELNAS--DDRGIDVVRNQIKD--- 99 +L YGPPG GKT A+A + + + E + + +G +++ + + Sbjct: 183 GVLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVGETER 242 Query: 100 -----FASTRQIFSKG-FKLIILDEADAMTNAAQNALRRVIE--------------RYTK 139 F R+ S+G ++ DE D++ + +E + Sbjct: 243 HIRLIFQRAREKASEGTPVIVFFDEMDSIFRTRGTGVSSDVETTVVPQLLSEIDGVEGLE 302 Query: 140 NTRFCVLANYAHKLTPALL--SRCTRFRFQPLPQEAIER 176 N +N + PA+L R P + Sbjct: 303 NVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQ 341 >2ZAO-A nrPDB Length = 444 Score = 62.9 bits (151), Expect = 2e-10, Method: Composition-based stats. Identities = 40/217 (18%), Positives = 75/217 (34%), Gaps = 42/217 (19%) Query: 20 RPET-LDEVYGQNEVITTVRKFVDEG-KLPHL-----------LFYGPPGTGKTSTIVAL 66 RP +V G +++ V K PHL L +GPPGTGK+ A+ Sbjct: 128 RPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV 187 Query: 67 AREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFAS-TRQIF----SKGFKLIILDEADA 121 A E + ++ D+V + + + +F +I +DE D+ Sbjct: 188 ATEANNSTFFSI---------SSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDS 238 Query: 122 MTNA-----AQNALRRVIERYTK---------NTRFCVLANYAHKLTPALLSRCTRFRFQ 167 + + ++ A R E + N L A+ R + + Sbjct: 239 LCGSRSENESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRRRFEKRIYI 298 Query: 168 PLPQEAIERRIANVLV-HEKLKLSPNAEKALIELSNG 203 PLP+ + + + + L+ + L ++G Sbjct: 299 PLPEAHARAAMFRLHLGSTQNSLTEADFQELGRKTDG 335 >6BLB-A nrPDB Length = 355 Score = 61.4 bits (147), Expect = 5e-10, Method: Composition-based stats. Identities = 41/233 (17%), Positives = 78/233 (33%), Gaps = 37/233 (15%) Query: 20 RPETLDEVYGQNEVITTVRKFVDEGK-----LPHLLFYGPPGTGKTSTIVALAREIYGKN 74 RP L + GQ V + F+ + L H L +GPPG GKT+ +A+E Sbjct: 28 RPLKLADYIGQPSVREQMELFIHAARGRQEALDHTLIFGPPGLGKTTLANIIAQE----- 82 Query: 75 YSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNAAQNALRRVI 134 + ++ G + R D A+ G ++ +DE ++ + L + Sbjct: 83 -----MGVSIKSTSGPVLERP--GDLAALLTNLEAG-DVLFVDEIHRLSPIVEEVLYPAM 134 Query: 135 ERYT------------------KNTRFCVLANYAHKLTPALLSRCTRF-RFQPLPQEAIE 175 E + A LT L R R + E + Sbjct: 135 EDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQRLEFYNVEDLA 194 Query: 176 RRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEIS 228 ++ L++ P + + + G R +L+ + + + +I+ Sbjct: 195 TIVSRSAGILGLEIEPQGAAEIAKRARGTPRIANRLLRRVRDFAEVRGQGDIT 247 >5VQ9-D nrPDB Length = 432 Score = 56.4 bits (134), Expect = 2e-08, Method: Composition-based stats. Identities = 39/172 (22%), Positives = 69/172 (40%), Gaps = 36/172 (20%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSN----MVLELNAS-------DDRGIDVVRNQI 97 +L +GPPGTGKTS ALA+++ + S ++E+N+ + G V + Sbjct: 175 VLLHGPPGTGKTSLCKALAQKLTIRLSSRYRYGQLIEINSHSLFSKWFSESGKLVTKM-- 232 Query: 98 KDFASTRQIFSKGFKLII--LDEADAMTNAAQNALR---------RVIERYT-------- 138 F + + L+ +D+ +++T AA+NA R RV+ Sbjct: 233 --FQKIQDLIDDKDALVFVLIDQVESLT-AARNACRAGTEPSDAIRVVNAVLTQIDQIKR 289 Query: 139 -KNTRFCVLANYAHKLTPALLSRCTRFRFQPLPQEAIERRIANVLVHEKLKL 189 N +N K+ A + R ++ P A +I + E +K Sbjct: 290 HSNVVILTTSNITEKIDVAFVDRADIKQYIGPPSAAAIFKIYLSCLEELMKC 341 >2XSZ-D nrPDB Length = 378 Score = 54.8 bits (130), Expect = 5e-08, Method: Composition-based stats. Identities = 30/199 (15%), Positives = 63/199 (31%), Gaps = 19/199 (9%) Query: 53 GPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIK-DFASTRQIFSKG- 110 GPPG T ++ + ++ + + VR QI A R+ Sbjct: 149 GPPGVVHTVSLHEI--DVINSRTQGFLALFSGDTGEIKSEVREQINAKVAEWREEGKAEI 206 Query: 111 -FKLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANY------------AHKLTPAL 157 ++ +DE + + + L R +E + N H + L Sbjct: 207 IPGVLFIDEVHMLDIESFSFLNRALESDMAPV-LIMATNRGITRIRGTSYQSPHGIPIDL 265 Query: 158 LSRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELS-NGDMRRVLNVLQSCK 216 L R P ++ ++ + E +++S +A L + +R + ++ + Sbjct: 266 LDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAAS 325 Query: 217 ATLDNPDEDEISDDVIYEC 235 E+ D I Sbjct: 326 LVCRKRKGTEVQVDDIKRV 344 Score = 32.5 bits (72), Expect = 0.28, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 33/88 (37%), Gaps = 4/88 (4%) Query: 47 PHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVL--ELNASDDRGIDVVRNQIKDF--AS 102 +L G PGTGKT+ + +A+ + + E+ + + + + + Sbjct: 86 RAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVR 145 Query: 103 TRQIFSKGFKLIILDEADAMTNAAQNAL 130 ++ + L E D + + Q L Sbjct: 146 IKEGPPGVVHTVSLHEIDVINSRTQGFL 173 >4ZPX-A nrPDB Length = 413 Score = 49.4 bits (116), Expect = 2e-06, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 36/71 (50%), Gaps = 2/71 (2%) Query: 22 ETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLE 81 + +D+V GQ + ++ ++ + H+L G PGTGK+ A+A + + ++++ Sbjct: 38 KLIDQVIGQEHAVEVIKTAANQKR--HVLLIGEPGTGKSMLGQAMAELLPTETLEDILVF 95 Query: 82 LNASDDRGIDV 92 N D+ + Sbjct: 96 PNPEDENMPRI 106 >6QI9-D nrPDB Length = 463 Score = 48.3 bits (113), Expect = 4e-06, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 44/138 (31%), Gaps = 14/138 (10%) Query: 111 FKLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANY------------AHKLTPALL 158 ++ +DE + + + L R +E + N H + LL Sbjct: 293 PGVLFIDEVHMLDIESFSFLNRALESDMAPV-LIMATNRGITRIRGTSYQSPHGIPIDLL 351 Query: 159 SRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELS-NGDMRRVLNVLQSCKA 217 R P ++ ++ + E +++S +A L + +R + ++ + Sbjct: 352 DRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASL 411 Query: 218 TLDNPDEDEISDDVIYEC 235 E+ D I Sbjct: 412 VCRKRKGTEVQVDDIKRV 429 Score = 29.0 bits (63), Expect = 3.0, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 15/24 (62%) Query: 47 PHLLFYGPPGTGKTSTIVALAREI 70 +L G PGTGKT+ + +A+ + Sbjct: 71 RAVLIAGQPGTGKTAIAMGMAQAL 94 >3K1J-A nrPDB Length = 604 Score = 48.3 bits (113), Expect = 5e-06, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 36/71 (50%), Gaps = 2/71 (2%) Query: 22 ETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLE 81 + +D+V GQ + ++ ++ + H+L G PGTGK+ A+A + + ++++ Sbjct: 38 KLIDQVIGQEHAVEVIKTAANQKR--HVLLIGEPGTGKSMLGQAMAELLPTETLEDILVF 95 Query: 82 LNASDDRGIDV 92 N D+ + Sbjct: 96 PNPEDENMPRI 106 >3SC3-A nrPDB Length = 225 Score = 48.3 bits (113), Expect = 5e-06, Method: Composition-based stats. Identities = 33/196 (16%), Positives = 68/196 (34%), Gaps = 23/196 (11%) Query: 29 GQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDR 88 G +E+I ++ + + +GP +G+T I A + + L Sbjct: 18 GNDELIGALKSAASGDGVQAIYLWGPVKSGRTHLIHAACARANELERRSFYIPLGIHASI 77 Query: 89 GIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNAA------QNALRRVIERYTKNTR 142 ++ + F LI +D+ DA+ + RV E+ + Sbjct: 78 STALLEGL------------EQFDLICIDDVDAVAGHPLWEEAIFDLYNRVAEQKRGSLI 125 Query: 143 FCVLANYAHK--LTPALLSRC---TRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKAL 197 A+ + P L+SR ++ QP+ + + L+L + + L Sbjct: 126 VSASASPMEAGFVLPDLVSRMHWGLTYQLQPMMDDEKLAALQRRAAMRGLQLPEDVGRFL 185 Query: 198 IELSNGDMRRVLNVLQ 213 + D+R + +VL Sbjct: 186 LNRMARDLRTLFDVLD 201 >2QBY-A nrPDB Length = 386 Score = 47.9 bits (112), Expect = 6e-06, Method: Composition-based stats. Identities = 42/269 (15%), Positives = 89/269 (33%), Gaps = 48/269 (17%) Query: 25 DEVYGQNEVITTVRKFV----DEGKLPHLLFYGPPGTGKTSTIVALA---REIYGKNYSN 77 DE+ + + I + + E K ++ YG GTGKT+ + + + + + + Sbjct: 20 DELPHREDQIRKIASILAPLYREEKPNNIFIYGLTGTGKTAVVKFVLSKLHKKFLGKFKH 79 Query: 78 MVLELNASDD------------------RGIDVVRNQIKDFASTRQIFSKGFKLIILDEA 119 + + D G+ + + + R +I+LDE Sbjct: 80 VYINTRQIDTPYRVLADLLESLDVKVPFTGLSIAELYRRLVKAVRDY--GSQVVIVLDEI 137 Query: 120 DAMTNAAQNAL-----RRVIERYTKNTRFCVLANYA---HKLTPALLSRCTR--FRFQPL 169 DA + + R E F + N L P + S + F P Sbjct: 138 DAFVKKYNDDILYKLSRINSEVNKSKISFIGITNDVKFVDLLDPRVKSSLSEEEIIFPPY 197 Query: 170 PQEAIERRIANVLVHEKLKLSPNAE--------KALIELSNGDMRRVLNVLQSCKATLDN 221 E +E + ++ P AL +GD RR L++L+ + Sbjct: 198 NAEELEDILT---KRAQMAFKPGVLPDNVIKLCAALAAREHGDARRALDLLRVSGEIAER 254 Query: 222 PDEDEISDDVIYECCGAPRPSDLKAVLKS 250 + ++ ++ +Y ++ ++ + Sbjct: 255 MKDTKVKEEYVYMAKEEIERDRVRDIILT 283 >2Z4R-A nrPDB Length = 440 Score = 46.7 bits (109), Expect = 2e-05, Method: Composition-based stats. Identities = 31/215 (14%), Positives = 73/215 (33%), Gaps = 12/215 (5%) Query: 44 GKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFAST 103 G+ L YG G GKT + ++ + V+ + + V + Sbjct: 128 GRYNPLFIYGGVGLGKTHLLQSIGNYVVQNEPDLRVMYITSEKFLNDLVDSMKEGKLNEF 187 Query: 104 RQIFSKGFKLIILDEADAM--TNAAQNALRRVIERYTKNTRFCVLANY--AHKLTPALLS 159 R+ + K ++++D+ + Q L + + V+ + KL+ Sbjct: 188 REKYRKKVDILLIDDVQFLIGKTGVQTELFHTFNELHDSGKQIVICSDREPQKLSE-FQD 246 Query: 160 RC-------TRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVL 212 R + +P +E + +L E +L + E + ++RR+ + Sbjct: 247 RLVSRFQMGLVAKLEPPDEETRKSIARKMLEIEHGELPEEVLNFVAENVDDNLRRLRGAI 306 Query: 213 QSCKATLDNPDEDEISDDVIYECCGAPRPSDLKAV 247 + ++ + I +P+ +KA+ Sbjct: 307 IKLLVYKETTGKEVDLKEAILLLKDFIKPNRVKAM 341 >5X06-E nrPDB Length = 253 Score = 46.4 bits (108), Expect = 2e-05, Method: Composition-based stats. Identities = 29/192 (15%), Positives = 69/192 (35%), Gaps = 15/192 (7%) Query: 30 QNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRG 89 + ++ ++ + + ++ + G G++ + A E+ + + + L D+ Sbjct: 47 NSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACAELSQRGDAVGYVPL----DKR 102 Query: 90 IDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANY 149 V + + + I DE M A + R++E + TR + + Sbjct: 103 TWFVPEVLDGMEHLSLVCIDNIECIAGDELWEM--AIFDLYNRILE--SGKTRLLITGDR 158 Query: 150 AHKLT----PALLSRCT---RFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSN 202 + P L SR ++ QPL E + + +L + + L++ + Sbjct: 159 PPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLD 218 Query: 203 GDMRRVLNVLQS 214 +MR + L Sbjct: 219 REMRTLFMTLDQ 230 >3SYK-A nrPDB Length = 309 Score = 46.4 bits (108), Expect = 2e-05, Method: Composition-based stats. Identities = 39/167 (23%), Positives = 68/167 (40%), Gaps = 20/167 (11%) Query: 48 HLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIF 107 H+ F G PGTGKT+ + +A ++ Y ++ + D D+V I A + Sbjct: 69 HMSFTGNPGTGKTTVALKMAGLLHRLGYVRKGHLVSVTRD---DLVGQYIGHTAPKTKEV 125 Query: 108 SKGFK--LIILDEA------DAMTNAAQNALRRVIERYTKN--TRFCVLANYAHKL---- 153 K ++ +DEA D + Q A+ +++ N +LA YA ++ Sbjct: 126 LKRAMGGVLFIDEAYYLYRPDNERDYGQEAIEILLQVMENNRDDLVVILAGYADRMENFF 185 Query: 154 --TPALLSRCTRFRFQP-LPQEAIERRIANVLVHEKLKLSPNAEKAL 197 P SR P E + ++L + +++P AE AL Sbjct: 186 QSNPGFRSRIAHHIEFPDYSDEELFEIAGHMLDDQNYQMTPEAETAL 232 >4YPL-A nrPDB Length = 555 Score = 45.6 bits (106), Expect = 3e-05, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 68/199 (34%), Gaps = 53/199 (26%) Query: 13 LPWVEKYRPETLD----------EVYGQNEVITTVRKFVD----------EGKLPHLLFY 52 +PW K PE LD + YG +V + +++ K P L+ Sbjct: 58 VPW-SKADPEVLDINHTRQVLDEDHYGLKDVKERILEYLAVRQLTQGLDVRNKAPILVLV 116 Query: 53 GPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQI-FSKGF 111 GPPG GKTS ++AR + K ++ R +R + + Sbjct: 117 GPPGVGKTSLGRSIARSMNRK-----FHRISLGGVRDEAEIRGHRRTYIGAMPGKLIHAM 171 Query: 112 K-------LIILDEADAMTNAAQN----ALRRVIERYTKNT---------------RFCV 145 K +I+LD+ D M++ + A+ V++ NT F Sbjct: 172 KQVGVINPVILLDQIDKMSSDWRGDPASAMLEVLDPEQNNTFTDHYLDVPYDLSKVFFIT 231 Query: 146 LANYAHKLTPALLSRCTRF 164 AN + LL R Sbjct: 232 TANTLQTIPRPLLDRMEVI 250 >4YPN-A nrPDB Length = 293 Score = 45.2 bits (105), Expect = 4e-05, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 68/199 (34%), Gaps = 53/199 (26%) Query: 13 LPWVEKYRPETLD----------EVYGQNEVITTVRKFVD----------EGKLPHLLFY 52 +PW K PE LD + YG +V + +++ K P L+ Sbjct: 91 VPW-SKADPEVLDINHTRQVLDEDHYGLKDVKERILEYLAVRQLTQGLDVRNKAPILVLV 149 Query: 53 GPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQI-FSKGF 111 GPPG GKTS ++AR + K ++ R +R + + Sbjct: 150 GPPGVGKTSLGRSIARSMNRK-----FHRISLGGVRDEAEIRGHRRTYIGAMPGKLIHAM 204 Query: 112 K-------LIILDEADAMTNAAQN----ALRRVIERYTKNT---------------RFCV 145 K +I+LDE D M++ + A+ V++ NT F Sbjct: 205 KQVGVINPVILLDEIDKMSSDWRGDPASAMLEVLDPEQNNTFTDHYLDVPYDLSKVFFIT 264 Query: 146 LANYAHKLTPALLSRCTRF 164 AN + LL R Sbjct: 265 TANTLQTIPRPLLDRMEVI 283 >4CIU-A nrPDB Length = 727 Score = 44.8 bits (104), Expect = 5e-05, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 93/261 (35%), Gaps = 36/261 (13%) Query: 27 VYGQNEVITTVRKFVDEGK---------LPHLLFYGPPGTGKTSTIVALAREIYGKNYSN 77 V GQNE + V + + + LF GP G GKT ALA ++ + + Sbjct: 428 VIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAM 487 Query: 78 MVLELNASDDRGIDVVR---------NQIKDFASTRQIFSKGFKLIILDEADAMTNAAQN 128 + +++ + V R + T + + + +I+LD + N Sbjct: 488 VRIDM-SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDAVEKAHPDVFN 546 Query: 129 ALRRVIERYT-----------KNTRFCVLANYAHKLTPALLSRCTRFRFQPLPQEAIER- 176 L +V++ +NT + +N L + L + Sbjct: 547 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHN 606 Query: 177 -RIANV-LVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDNPDED-EISDDVIY 233 R + + E + P E+ + ++ ++R+ L+ + DE ++ + Y Sbjct: 607 FRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGY 666 Query: 234 ECCGAPRPSDLKAVLKSILED 254 + RP LK ++ +E+ Sbjct: 667 DPVYGARP--LKRAIQQQIEN 685 Score = 37.5 bits (85), Expect = 0.009, Method: Composition-based stats. Identities = 55/347 (15%), Positives = 106/347 (30%), Gaps = 46/347 (13%) Query: 10 KENLPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALARE 69 K + E+ LD V G++E I + + + + G PG GKT+ + LA+ Sbjct: 21 KYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQR 80 Query: 70 IYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFK-------------LIIL 116 I + R + + + A R F + K ++ + Sbjct: 81 IINGEVPEGL-----KGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFI 135 Query: 117 DEADAM--TNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSRCTRFRFQPLPQEAI 174 D M A A+ R + A L ++ + A+ Sbjct: 136 DALHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY-----RQYIEK---DAAL 187 Query: 175 ERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYE 234 ERR V ++ + + +L+ K + +I+D I Sbjct: 188 ERRFQKV-----------------FVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVA 230 Query: 235 CCGAPRPSDLKAVLKSILEDDWGTAHYTLNKVRSAKGLALIDLIEGIVKILEDYELQNEE 294 L D A ++ +K L L I+++ + + + Sbjct: 231 AATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKA 290 Query: 295 TRVHLLTKLADIEYSISKGGNDQIQGSAVIGAIKASFE-NETVKANV 340 + +L + +S + A KAS +T+KA + Sbjct: 291 SDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAEL 337 >6EM8-A nrPDB Length = 818 Score = 44.8 bits (104), Expect = 6e-05, Method: Composition-based stats. Identities = 42/241 (17%), Positives = 86/241 (35%), Gaps = 30/241 (12%) Query: 23 TLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALA-----REIYGKNYSN 77 TLD V G+++ IT V + + + + G PG GKT+ LA E+ Sbjct: 178 TLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDK 237 Query: 78 MVLELNASDDRGIDVVRNQIKDFAST--RQIFSKGFKLIILDEADAM--TNAAQNALRRV 133 V+ L+ R + ++ +I G ++ +DE + A+ A+ Sbjct: 238 RVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGNVILFIDELHTLVGAGGAEGAIDAS 297 Query: 134 IERYTKNTRFCVLANYAHKLTPAL----LSRCTRFRFQPLPQEA--------IERRIANV 181 R + A L RFQP+ + I + + + Sbjct: 298 NILKPALARGELQCIGATTLDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDR 357 Query: 182 LV-HEKLKLSPNAEKALIELSNGDMR------RVLNVLQSCKATLDNPDEDEISDDVIYE 234 H ++ +S A +A ++LSN + + ++++ + + + + + E Sbjct: 358 YEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAIDLIDEASSKVRLKSHT--TPNNLKE 415 Query: 235 C 235 Sbjct: 416 I 416 Score = 41.7 bits (96), Expect = 4e-04, Method: Composition-based stats. Identities = 28/152 (18%), Positives = 60/152 (39%), Gaps = 28/152 (18%) Query: 25 DEVYGQNEVITTVRKFVDEGK---------LPHLLFYGPPGTGKTSTIVALAREIYGKNY 75 + V GQ + + ++ K V + + +F GP G GKT ALA ++G + Sbjct: 508 ERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDD 567 Query: 76 SNMVLELNA-----SDDRGIDVVRNQIKD---FASTRQIFSKGFKLIILDEADAMTNAAQ 127 + + ++++ + R + + T ++ K + +I+ DE + Sbjct: 568 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 627 Query: 128 NALRRVIERYT-----------KNTRFCVLAN 148 N L +V++ +NT + +N Sbjct: 628 NILLQVLDDGHLTDTKGRTVDFRNTIIIMTSN 659 >6EMW-B nrPDB Length = 225 Score = 44.4 bits (103), Expect = 7e-05, Method: Composition-based stats. Identities = 28/152 (18%), Positives = 60/152 (39%), Gaps = 28/152 (18%) Query: 25 DEVYGQNEVITTVRKFVDEGK---------LPHLLFYGPPGTGKTSTIVALAREIYGKNY 75 + V GQ + + ++ K V + + +F GP G GKT ALA ++G + Sbjct: 21 ERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDD 80 Query: 76 SNMVLELNA-----SDDRGIDVVRNQIKD---FASTRQIFSKGFKLIILDEADAMTNAAQ 127 + + ++++ + R + + T ++ K + +I+ DE + Sbjct: 81 AMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVF 140 Query: 128 NALRRVIERYT-----------KNTRFCVLAN 148 N L +V++ +NT + +N Sbjct: 141 NILLQVLDDGHLTDTKGRTVDFRNTIIIMTSN 172 >4XGU-A nrPDB Length = 424 Score = 44.4 bits (103), Expect = 8e-05, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 58/164 (35%), Gaps = 28/164 (17%) Query: 49 LLFYGPPGTGKTSTIVALAREI----YGKNYSNMVLELNASD------DRGIDVVRNQIK 98 +L GPPGTGKTS LA+ + K +++LE+N+ +V+ Sbjct: 175 ILLTGPPGTGKTSLCKGLAQHLSIRMNDKYSKSVMLEINSHSLFSKWFSESGKLVQKMFD 234 Query: 99 DFASTRQIFSKGFKLIILDEADAMT------------NAAQNALRRVIERY-----TKNT 141 + K +++DE +++ + A A+ ++ + N Sbjct: 235 QIDELAED-EKCMVFVLIDEVESLGMCRESSSSRSEPSDAIRAVNALLTQIDRIRRRDNV 293 Query: 142 RFCVLANYAHKLTPALLSRCTRFRFQPLPQEAIERRIANVLVHE 185 +N L AL+ R + P + + + E Sbjct: 294 LILCTSNLESTLDKALVDRADIVKNVGQPSDFARYSMLKSSIME 337 >5UJM-A nrPDB Length = 522 Score = 44.4 bits (103), Expect = 8e-05, Method: Composition-based stats. Identities = 43/241 (17%), Positives = 90/241 (37%), Gaps = 39/241 (16%) Query: 31 NEVITTVRKFVDEGKLPH----LLFYGPPGTGKTSTIVALAREIYGKNYSNMV-----LE 81 + + FV+ L H + G PGTGKT+T+ + R + +N V +E Sbjct: 169 EQEFQDIYNFVESKLLDHTGGCMYISGVPGTGKTATVHEVIRCLQQAAQANDVPPFQYIE 228 Query: 82 LNASDDRG-----IDVVRNQIKDFAS---TRQIFSKGF---------KLIILDEADAMTN 124 +N + +++ A+ ++ +K F ++++DE D + Sbjct: 229 VNGMKLTEPHQVYVQILQKLTGQKATANHAAELLAKQFCTRGSPQETTVLLVDELDILWT 288 Query: 125 AAQNALRRVIERYTKN---TRFCVLANYAH----KLTPALLSRCTRFR--FQPLPQEAIE 175 Q+ + + + T +AN + + SR R FQP ++ Sbjct: 289 HKQDIMYNLFDWPTHKEARLVVLAIANTMDLPERIMMNRVSSRLGLTRMCFQPYTYSQLQ 348 Query: 176 RRIANVLVHEKLKLSPNAEKALIELS---NGDMRRVLNVLQSCKATLDNPDEDEISDDVI 232 + + + L H K +A + + +GD RR L++ + + + S ++ Sbjct: 349 QILRSRLKHLK-AFEDDAIQLVARKVAALSGDARRCLDICRRATEICEFSQQKPDSPGLV 407 Query: 233 Y 233 Sbjct: 408 T 408 >6ED3-A nrPDB Length = 848 Score = 44.0 bits (102), Expect = 8e-05, Method: Composition-based stats. Identities = 55/347 (15%), Positives = 116/347 (33%), Gaps = 41/347 (11%) Query: 10 KENLPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALARE 69 K + + R LD V G++ I V + + + + G PG GKT+ + LA+ Sbjct: 163 KYSTDLTARAREGKLDPVIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQR 222 Query: 70 IYGKNY-----SNMVLELNASDDRGIDVVRNQIKDFASTRQI---FSKGFKLIILDEADA 121 I + ++ L+ R + ++ S G + +DE Sbjct: 223 IVAGDVPESLRDKTIVALDLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHT 282 Query: 122 M------TNAAQNALRRVIERYTKNTRFCVLANYAHKL------TPALLSRCTRFRFQPL 169 + A +A + + V A + AL R + Sbjct: 283 IVGAGATGEGAMDAGNMIKPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEP 342 Query: 170 PQEAIERRIANVL----VHEKLKLSPNAEKALIELSNGDMR------RVLNVLQSCKATL 219 E + + VH ++++ +A A LS+ + + ++++ + L Sbjct: 343 SVEDTIGILRGLKDRYEVHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRL 402 Query: 220 DNPDEDEISDDVIYECCGAPRPSDLKAVLKSILEDDWGTAHYTLNKVRSAKGLALIDLIE 279 + I E R +++ + S ED+ L K+RS L E Sbjct: 403 RMEIDS--RPVEIDEVERLVRRLEIEEMALSKEEDEASAER--LAKLRSELADQKEKLAE 458 Query: 280 GIVKILEDYELQNEETRVHLLTKLADIEYSISKGGNDQIQGSAVIGA 326 + QNE+ + ++ L + + +G +++ + + Sbjct: 459 LTTRW------QNEKNAIEIVRDLKE-QLEALRGESERAERDGDLAK 498 Score = 39.4 bits (90), Expect = 0.002, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 74/203 (36%), Gaps = 36/203 (17%) Query: 27 VYGQNEVITTV-------RKFVDEGKLP--HLLFYGPPGTGKTSTIVALAREIYGKNYSN 77 V GQ +T V R V + P +F GP G GKT ALA ++ + Sbjct: 572 VIGQKAAVTAVSDAVRRSRAGVSDPNRPTGAFMFLGPTGVGKTELAKALADFLFDDERAM 631 Query: 78 MVLELNASDDRGIDVVR---------NQIKDFASTRQIFSKGFKLIILDEADAMTNAAQN 128 + ++++ ++ V R T + + + +++ DE + + Sbjct: 632 VRIDMSEYGEKH-TVARLIGAPPGYVGYEAGGQLTEAVRRRPYTVVLFDEIEKAHPDVFD 690 Query: 129 ALRRVIERYT-----------KNTRFCVLANYAHKLTPALLSRCTRFRFQPLPQEAIERR 177 L +V++ +NT + +N + + R F+P R Sbjct: 691 VLLQVLDEGRLTDGHGRTVDFRNTILILTSNLGSGGSAEQVLAAVRATFKP----EFINR 746 Query: 178 IANVLVHEKLKLSPNAEKALIEL 200 + +VL+ E L P ++++ Sbjct: 747 LDDVLIFEGLN--PEELVRIVDI 767 >3M6A-A nrPDB Length = 543 Score = 44.0 bits (102), Expect = 8e-05, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 48/156 (30%), Gaps = 32/156 (20%) Query: 36 TVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRN 95 V+K K P L GPPG GKTS ++A+ + + ++ R +R Sbjct: 98 AVQKLTKSLKGPILCLAGPPGVGKTSLAKSIAKSL-----GRKFVRISLGGVRDESEIRG 152 Query: 96 QIKDFASTRQIF--------SKGFKLIILDEADAMTNAAQNALRRVI------ERYT--- 138 + + K + +LDE D M++ + + E+ + Sbjct: 153 HRRTYVGAMPGRIIQGMKKAGKLNPVFLLDEIDKMSSDFRGDPSSAMLEVLDPEQNSSFS 212 Query: 139 ----------KNTRFCVLANYAHKLTPALLSRCTRF 164 F AN + L R Sbjct: 213 DHYIEETFDLSKVLFIATANNLATIPGPLRDRMEII 248 >6QEL-G nrPDB Length = 245 Score = 44.0 bits (102), Expect = 9e-05, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 3/102 (2%) Query: 26 EVYGQNEVITTVRKFVD--EGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELN 83 E GQ ++ R++V+ +G + +F G PGTGK A+ E+ + S +++ + Sbjct: 77 ECEGQMNALSKARQYVEEFDGNIASFIFSGKPGTGKNHLAAAICNELLLRGKSVLIITVA 136 Query: 84 ASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNA 125 D RN L+++DE T + Sbjct: 137 DIMSAMKDTFRNS-GTSEEQLLNDLSNVDLLVIDEIGVQTES 177 >4LJ8-A nrPDB Length = 339 Score = 43.3 bits (100), Expect = 1e-04, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 79/236 (33%), Gaps = 59/236 (25%) Query: 27 VYGQNEVITTV-------RKFVDEGKLP--HLLFYGPPGTGKTSTIVALAREIYGKNYSN 77 V GQ+E I V R + + P LF GP G GKT LA ++ + Sbjct: 45 VVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLF--DTEE 102 Query: 78 MVLELNASDDRGIDVVRNQI----------KDFASTRQIFSKGFKLIILDEADAMTNAAQ 127 +++++ ++ V I + T + + + +I+ DE + Sbjct: 103 AMIQIDMTEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVF 162 Query: 128 NALRRVIERYT-----------KNTRFCVLANYAHKLT---------------------- 154 N L ++++ +NT + +N L Sbjct: 163 NILLQILDDGRLTDSHGRTVDFRNTVIILTSNLGSPLILEGLQKGWPYERIRDEVFKVLQ 222 Query: 155 ----PALLSRCTRF-RFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNGDM 205 P L+R F+PL +E I + + L + + +L+ + + D Sbjct: 223 QHFRPEFLNRLDEIVVFRPLTKEQIRQIVEIQLSYLRARLAEKRISLELTEAAKDF 278 >5VY8-A nrPDB Length = 908 Score = 42.5 bits (98), Expect = 2e-04, Method: Composition-based stats. Identities = 54/297 (18%), Positives = 104/297 (35%), Gaps = 36/297 (12%) Query: 2 STSTEKRSKENLPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTS 61 +T E SK + E+ R LD V G+ E I + + + + G PG GKT+ Sbjct: 161 NTPLEYLSKYAIDMTEQARQGKLDPVIGREEEIRSTIRVLARRIKSNPCLIGEPGIGKTA 220 Query: 62 TIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFK--------- 112 I +A+ I + + L + +D+ + A + F + FK Sbjct: 221 IIEGVAQRIIDDDVPTI---LQGAKLFSLDLA--ALTAGAKYKGDFEERFKGVLKEIEES 275 Query: 113 ----LIILDEADAMTN----AAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSRCTRF 164 ++ +DE + A N L+ + R N + + RF Sbjct: 276 KTLIVLFIDEIHMLMGNGKDDAANILKPALSRGQLKVIGATTNNEYRSIVEKDGAFERRF 335 Query: 165 RFQPLPQEAIERRIANVL-------VHEKLKLSPNAEKALIELSNGDM--RRVLNVLQSC 215 + + + ++ + +A + +H +++ +A +L+ + RR + S Sbjct: 336 QKIEVAEPSVRQTVAILRGLQPKYEIHHGVRILDSALVTAAQLAKRYLPYRR---LPDSA 392 Query: 216 KATLDNP--DEDEISDDVIYECCGAPRPSDLKAVLKSILEDDWGTAHYTLNKVRSAK 270 +D D E R L V LE D T ++++ A+ Sbjct: 393 LDLVDISCAGVAVARDSKPEELDSKERQLQLIQVEIKALERDEDADSTTKDRLKLAR 449 Score = 35.2 bits (79), Expect = 0.044, Method: Composition-based stats. Identities = 51/310 (16%), Positives = 97/310 (31%), Gaps = 51/310 (16%) Query: 25 DEVYGQNEVITTV-------RKFVDEGKLP-HLLFYGPPGTGKTSTIVALAREIYGKNYS 76 EV GQ + I V R + + P LF G G+GKT +A ++ N Sbjct: 578 SEVVGQMDAIKAVSNAVRLSRSGLANPRQPASFLFLGLSGSGKTELAKKVAGFLF--NDE 635 Query: 77 NMVLELNASDDRGIDVVRNQIKDFA----------STRQIFSKGFKLIILDEADAMTNAA 126 +M++ ++ S+ V + A T Q+ K + +++ DE + Sbjct: 636 DMMIRVDCSELSEKYAVSKLLGTTAGYVGYDEGGFLTNQLQYKPYSVLLFDEVEKAHPDV 695 Query: 127 QNALRRVIERYT-----------KNTRFCVLANYAHKLTPALLSR------------CTR 163 + ++++ N + +N + + R Sbjct: 696 LTVMLQMLDDGRITSGQGKTIDCSNCIVIMTSNLGAEFINSQQGSKIQESTKNLVMGAVR 755 Query: 164 FRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSN----GDMRRVLNVLQSCKATL 219 F+P I + + K + + L E+ D LN+ Q K L Sbjct: 756 QHFRPEFLNRISSIVIFNKLSRK-AIHKIVDIRLKEIEERFEQNDKHYKLNLTQEAKDFL 814 Query: 220 DNPDEDEISDDVIYECCGAPRPSDLKAVLKSILEDDWGTAHYTLNKVRSAKGLALIDLIE 279 + D + L + IL+++ T+N V ++ E Sbjct: 815 AKYGYSD--DMGARPLNRLIQNEILNKLALRILKNEIKD-KETVNVVLKKGKSRDENVPE 871 Query: 280 GIVKILEDYE 289 + LE Sbjct: 872 EAEECLEVLP 881 >2XSZ-A nrPDB Length = 367 Score = 42.5 bits (98), Expect = 3e-04, Method: Composition-based stats. Identities = 48/294 (16%), Positives = 79/294 (26%), Gaps = 85/294 (28%) Query: 27 VYGQNEVITTVRKFVDEGKL-----PHLLFYGPPGTGKTSTIVALAREI----------- 70 + GQ V+ K +L GPPGTGKT+ +A+A+E+ Sbjct: 53 LVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVG 112 Query: 71 -------------YGKNYSNMVLELNASDDRG-IDVVRNQIKDFASTRQIFS-------- 108 +N+ + G I V D A+ R Sbjct: 113 SEVYSTEIKKTEVLMENFRRAIGLRIKEGPPGIIQDVTLHDLDVANARPQGGQDILSMMG 172 Query: 109 ---KGFKLIILD-----------------------------EADAMTNAAQNALRRVIER 136 K K I D E + L R +E Sbjct: 173 QLMKPKKTEITDKLRGEINKVVNKYIDQGIAELVPGVLFVDEVHMLDIECFTYLHRALES 232 Query: 137 YTKNTRFCVLANY-------------AHKLTPALLSRCTRFRFQPLPQEAIERRIANVLV 183 + +N H + LL R R + +++ I Sbjct: 233 -SIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMIIRTMLYTPQEMKQIIKIRAQ 291 Query: 184 HEKLKLSPNAEKALIEL-SNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYECC 236 E + +S A L E+ + +R + +L +D I + + E Sbjct: 292 TEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKINGKDSIEKEHVEEIS 345 >4M4W-J nrPDB Length = 317 Score = 42.5 bits (98), Expect = 3e-04, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 11/95 (11%) Query: 31 NEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGI 90 V ++ + + GK L YG G GKT + A+A E+ K YS+M++ + Sbjct: 146 QHVTDFLKSYNETGKGKGLYLYGKFGVGKTFMLAAIANELAEKEYSSMIVYV-------P 198 Query: 91 DVVRN----QIKDFASTRQIFSKGFKLIILDEADA 121 + VR + K +++LD+ A Sbjct: 199 EFVRELKNSLQDQTLEEKLNMVKTTPVLMLDDIGA 233 >6D00-1 nrPDB Length = 883 Score = 42.1 bits (97), Expect = 4e-04, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 51/128 (39%), Gaps = 5/128 (3%) Query: 6 EKRSKENLPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVA 65 E SK + E LD V G++E+I+ V + + + G PG GKT+ Sbjct: 159 EALSKYCIDLTELAASGKLDPVIGRDEIISRVIRVLSRRTKNNPCLVGEPGVGKTAIAEG 218 Query: 66 LAREIYGKNYSNMVLELNASDDRGIDVV-RNQIKDFASTRQIFSKGFK----LIILDEAD 120 LA I + + + + S D G + +F + K K ++ +DE Sbjct: 219 LANRIVKGDIPSSLQKKVYSLDIGSLLAGAKYRGEFEERLKAVLKELKEAQAIVFIDEIH 278 Query: 121 AMTNAAQN 128 + A ++ Sbjct: 279 TVLGAGKS 286 Score = 36.7 bits (83), Expect = 0.015, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 67/174 (38%), Gaps = 31/174 (17%) Query: 3 TSTEKRSKENLPWVEKYRPETLDEVYGQNEVITTVRKFVDEGK---------LPHLLFYG 53 ++ ++ KE L +E+Y + V GQ+E I + + + L LF G Sbjct: 551 SNLQRSEKEKLLHMEEYMKQ---HVVGQDEAIKAICDAIRLSRTGLQNRNRPLASFLFLG 607 Query: 54 PPGTGKTSTIVALAREIYGKNYSNMVLELNA-----SDDRGIDVVRNQIKD---FASTRQ 105 P G GKT + LA ++ + + ++++ + R + I T Sbjct: 608 PTGCGKTLCVKELAAFLFNDPGAIVRIDMSEYMEKHAVSRLVGAPPGYIGHDEGGQLTEA 667 Query: 106 IFSKGFKLIILDEADAMTNAAQNALRRVIERYT-----------KNTRFCVLAN 148 + + + +++ DE + N L ++++ KNT + +N Sbjct: 668 VRRRPYTVVLFDEMEKAHKDVSNLLLQILDDGHCTDSKGRRVDFKNTIIVMTSN 721 >5D4W-A nrPDB Length = 926 Score = 42.1 bits (97), Expect = 4e-04, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 50/149 (33%), Gaps = 27/149 (18%) Query: 27 VYGQNEVITTVRKFVDEGKL--------PHLLFYGPPGTGKTSTIVALAREIYGK----- 73 V GQ E + +V + + P LF GP GTGKT ALA ++ Sbjct: 600 VVGQKEAVQSVSNAIRLQRSGLSNPNQPPSFLFCGPSGTGKTLLTKALAEFLFDDPKSMI 659 Query: 74 NYSNMVLELNASDDRGIDVVRNQIKDFA---STRQIFSKGFKLIILDEADAMTNAAQNAL 130 + + S R I + A T + + F +++ D + L Sbjct: 660 RFDMSEYQERHSLSRMIGAPPGYVGHDAGGQLTEALRRRPFSILLFDAVEKAAKEVLTVL 719 Query: 131 RRVIERYT-----------KNTRFCVLAN 148 ++++ KN + +N Sbjct: 720 LQLMDDGRITDGQGRVVDAKNCIVVMTSN 748 Score = 37.5 bits (85), Expect = 0.008, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 66/188 (35%), Gaps = 13/188 (6%) Query: 6 EKRSKENLPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVA 65 E SK + R +D V G+ E I V + + + + G PG GKT+ + Sbjct: 176 ENLSKFCIDMTAMAREGKIDPVIGREEEIRRVIRILSRRTKNNPVLIGEPGVGKTTIVEG 235 Query: 66 LAREIYGKNYSNMVL--ELNASDDRGIDVVRNQIKDFASTRQIFSKGFK------LIILD 117 LA+ I + + + +L + D + +F + K + ++ +D Sbjct: 236 LAQRIVNADVPDNLAACKLLSLDVGALVAGSKYRGEFEERMKGVLKEIQESKETIILFVD 295 Query: 118 EADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSRCTRFRFQPLPQEAIERR 177 + A + + + H + L+ ++ + A ERR Sbjct: 296 AIHLLMGAGSSGEGG--MDAANLLKPMLARGQLHCIGATTLAEYRKYIEK---DAAFERR 350 Query: 178 IANVLVHE 185 VLV E Sbjct: 351 FQQVLVKE 358 >4XGC-A nrPDB Length = 393 Score = 42.1 bits (97), Expect = 4e-04, Method: Composition-based stats. Identities = 38/214 (17%), Positives = 78/214 (36%), Gaps = 35/214 (16%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMV-----LELNA--------SDDRGIDVVRN 95 + G PGTGKT+T+ + R + N + LE+N + + + Sbjct: 63 MYVSGVPGTGKTATVTGVIRTLQRMAKQNELPAFEYLEINGMRLTEPRQAYVQIYKQLTG 122 Query: 96 QIKDFASTRQIFSKGF---------KLIILDEADAMTNAAQNALRRVIERYTKN---TRF 143 + + + K F ++++DE D + N Q+ + +++ TK+ Sbjct: 123 KTVSWEQAHALLEKRFTTPAPRRVTTVLLVDELDILCNRRQDVVYNLLDWPTKSAAKLVV 182 Query: 144 CVLANYAHKLTPALLSR------CTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKAL 197 +AN L+ + TR FQP + ++ + L + A + + Sbjct: 183 VTIANTMDLPERLLMGKVTSRLGLTRLTFQPYSHKQLQEIVTARLGGSE-TFKGEAVQLV 241 Query: 198 IE---LSNGDMRRVLNVLQSCKATLDNPDEDEIS 228 +GD RR L++ + D ++ Sbjct: 242 ARKVAAVSGDARRALDICRRATEIADTAAVKCVT 275 >5V8F-9 nrPDB Length = 513 Score = 42.1 bits (97), Expect = 4e-04, Method: Composition-based stats. Identities = 56/317 (17%), Positives = 102/317 (32%), Gaps = 53/317 (16%) Query: 31 NEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGI 90 +V+ + K + E + L GPPGTGKT+ + + R+ + L L+ S R Sbjct: 86 EQVMNFLAKAISEHRSDSLYITGPPGTGKTAQLDMIIRQKFQS------LPLSLSTPRSK 139 Query: 91 DVVRNQIKDFA------------------STRQIFSKGFKLIILDEADA--------MTN 124 DV+R+ + S I I D+ + Sbjct: 140 DVLRHTNPNLQNLSWFELPDGRLESVAVTSINCISLGEPSSIFQKIFDSFQDLNGPTLQI 199 Query: 125 AAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSR-------CTRFRFQPLPQE----- 172 L++ +E Y K T F V+ + +L A S F LP Sbjct: 200 KNMQHLQKFLEPYHKKTTFVVVLDEMDRLLHANTSETQSVRTILELFLLAKLPTVSFVLI 259 Query: 173 ------AIERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDE 226 ++ R + L ++ L P + V+ + S + P + Sbjct: 260 GMANSLDMKDRFLSRLNLDR-GLLPQTIVFQPYTAEQMYEIVIQKMSSLPTIIFQPMAIK 318 Query: 227 ISDDVIYECCGAPRPSDLKAVLKSILEDDWGTAHYTLNKVRSAKGLALIDLIEGIVKILE 286 + G R L VL+ +E + L+ R + A + L + + Sbjct: 319 FAAKKCAGNTGDLR--KLFDVLRGSIEIYELEKRFLLSPTRGSLNSAQVPLTPTTSPVKK 376 Query: 287 DYELQNEETRVHLLTKL 303 Y + ++ + K+ Sbjct: 377 SYPEPQGKIGLNYIAKV 393 >6E11-1 nrPDB Length = 906 Score = 41.7 bits (96), Expect = 5e-04, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 75/211 (35%), Gaps = 27/211 (12%) Query: 17 EKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALA--------- 67 EK R L +YG++E I + + + + G PGTGKT+ + L Sbjct: 199 EKVRNGKLQGIYGRDEEIRAIIESLLRYNKNSPVLVGNPGTGKTTIVEGLVYRIEKGDVP 258 Query: 68 REIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLI-ILDEADAM---- 122 +E+ G ++ S ++K+ +++ +K K+I +DE + Sbjct: 259 KELQGYTVISLNFRKFTSGTSYRGEFETRMKNI--IKELKNKKNKIILFVDEIHLLLGAG 316 Query: 123 ----TNAAQNALRRVIERYTKNTRFCVLANYAHKLTP---ALLSRCTRFRFQPLPQEAIE 175 A N L+ V+ + K A R + +P + Sbjct: 317 KAEGGTDAANLLKPVLSKGEIKLIGATTIAEYRKFIESCSAFERRFEKILVEPPSVDMTV 376 Query: 176 RRIANVLVH----EKLKLSPNAEKALIELSN 202 + + ++ + ++ A A ++S+ Sbjct: 377 KILRSLKSKYENFYGINITDKALVAAAKISD 407 Score = 38.3 bits (87), Expect = 0.005, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 46/127 (36%), Gaps = 21/127 (16%) Query: 27 VYGQNEVITTV-------RKFVDEGKLP--HLLFYGPPGTGKTSTIVALAREIYGKNYSN 77 + G ++I ++ + + + P LF GP G GKT LA E++ N + Sbjct: 603 IIGNEDIIKSLSDAVVKAATGMKDPEKPIGTFLFLGPTGVGKTELAKTLAIELF--NSKD 660 Query: 78 MVLELNASDDRGIDVVRNQI----------KDFASTRQIFSKGFKLIILDEADAMTNAAQ 127 ++ +N S+ V T + K +++ DE + Sbjct: 661 NLIRVNMSEFTEAHSVSKITGSPPGYVGFSDSGQLTEAVREKPHSVVLFDELEKAHADVF 720 Query: 128 NALRRVI 134 L +++ Sbjct: 721 KVLLQIL 727 >1OFI-A nrPDB Length = 310 Score = 41.3 bits (95), Expect = 6e-04, Method: Composition-based stats. Identities = 33/197 (16%), Positives = 57/197 (28%), Gaps = 44/197 (22%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDV---VRNQIKDFASTRQ 105 +L GP G GKT LA+ + G +V +R+ + D A Sbjct: 53 ILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRD-LTDSAGGAI 111 Query: 106 IFSKGFKLIILDEADAMTNAA------------QNALRRVIERYTKNTRFCVLAN----- 148 + ++ +DE D + Q L ++E T +T+ ++ Sbjct: 112 DAVEQNGIVFIDEIDKICKKGEYSGADVSREGVQRDLLPLVEGSTVSTKHGMVKTDHILF 171 Query: 149 ---------YAHKLTPALLSRC-TRFRFQPLPQEAIERRIAN-------------VLVHE 185 L P L R R L ER + Sbjct: 172 IASGAFQVARPSDLIPELQGRLPIRVELTALSAADFERILTEPHASLTEQYKALMATEGV 231 Query: 186 KLKLSPNAEKALIELSN 202 + + +A K + E + Sbjct: 232 NIAFTTDAVKKIAEAAF 248 >6AMN-A nrPDB Length = 349 Score = 41.0 bits (94), Expect = 8e-04, Method: Composition-based stats. Identities = 37/197 (18%), Positives = 72/197 (36%), Gaps = 22/197 (11%) Query: 2 STSTEKRSKENLPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTS 61 +T E SK + E+ R LD V G+ E I + + + + G PG GKT+ Sbjct: 158 NTPLEYLSKYAIDMTEQARQGKLDPVIGREEEIRSTIRVLARRIKSNPCLIGEPGIGKTA 217 Query: 62 TIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFK--------- 112 I +A+ I + + L + +D+ + A + F + FK Sbjct: 218 IIEGVAQRIIDDDVPTI---LQGAKLFSLDLA--ALTAGAKYKGDFEERFKGVLKEIEES 272 Query: 113 ----LIILDEADAMTN----AAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSRCTRF 164 ++ +DE + A N L+ + R N + + RF Sbjct: 273 KTLIVLFIDEIHMLMGNGKDDAANILKPALSRGQLKVIGATTNNEYRSIVEKDGAFERRF 332 Query: 165 RFQPLPQEAIERRIANV 181 + + + ++ + +A + Sbjct: 333 QKIEVAEPSVRQTVAIL 349 >3PXI-A nrPDB Length = 758 Score = 41.0 bits (94), Expect = 8e-04, Method: Composition-based stats. Identities = 46/256 (17%), Positives = 90/256 (35%), Gaps = 33/256 (12%) Query: 25 DEVYGQNEVITTVRK-------FVDEGKLP--HLLFYGPPGTGKTSTIVALAREIYGKNY 75 V GQ+E + V K + + K P +F GP G GKT ALA I+G Sbjct: 491 SRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESIFGDEE 550 Query: 76 SNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNAAQNALRRVIE 135 S + ++++ ++ + T ++ K + +++LD + N L +V+E Sbjct: 551 SMIRIDMSEYMEK------HSTSGGQLTEKVRRKPYSVVLLDAIEKAHPDVFNILLQVLE 604 Query: 136 RYT-----------KNTRFCVLANYAHKLTPALLSRCTRFRFQPLPQEAIERRIANVLVH 184 +NT + +N ++ R F+P RI ++V Sbjct: 605 DGRLTDSKGRTVDFRNTILIMTSNVGASEKDKVMGELKR-AFRP----EFINRIDEIIVF 659 Query: 185 EKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYECCGAPRPSDL 244 L ++ L + + + L D + V E P + Sbjct: 660 H--SLEKKHLTEIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAI 717 Query: 245 KAVLKSILEDDWGTAH 260 + ++ L ++ + Sbjct: 718 QKHVEDRLSEELLRGN 733 Score = 39.0 bits (89), Expect = 0.003, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 74/189 (39%), Gaps = 13/189 (6%) Query: 23 TLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLEL 82 +LD V G+++ I V + + + + G PG GKT+ LA++I ++ + Sbjct: 178 SLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDK 237 Query: 83 NASDDRGIDVVRNQIKDFAST--RQIFSKGFKLIILDEADAMTNAAQNALRRVIERYTKN 140 R + +D +I G ++ +D A A N L+ + R Sbjct: 238 RVMTLDMGTKYRGEFEDRLKKVMDEIRQAGNIILFIDAA----IDASNILKPSLARGELQ 293 Query: 141 TRFCVLANYAHKLTPALLSRCTRFRFQPLPQEAIERRIANVL-------VHEKLKLSPNA 193 + K + RF+ + Q +++ I + H ++ ++ +A Sbjct: 294 CIGATTLDEYRKYIEKDAALERRFQPIQVDQPSVDESIQILQGLRDRYEAHHRVSITDDA 353 Query: 194 EKALIELSN 202 +A ++LS+ Sbjct: 354 IEAAVKLSD 362 >1QVR-A nrPDB Length = 854 Score = 40.6 bits (93), Expect = 0.001, Method: Composition-based stats. Identities = 56/316 (17%), Positives = 105/316 (33%), Gaps = 39/316 (12%) Query: 24 LDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELN 83 LD V G++E I V + + + + G PG GKT+ + LA+ I + + Sbjct: 169 LDPVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGL---- 224 Query: 84 ASDDRGIDVVRNQIKDFASTRQIFSKGFK-------------LIILDEADAMTN------ 124 R + + + A R F + K ++ +DE + Sbjct: 225 -KGKRIVSLQMGSLLAGAKYRGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAGKAEG 283 Query: 125 --AAQNALRRVIERYTKNTRFCVLANYAHKL--TPALLSRCTRFRFQPLPQEAIERRIAN 180 A N L+ + R + ++ PAL R E + Sbjct: 284 AVDAGNMLKPALARGELRLIGATTLDEYREIEKDPALERRFQPVYVDEPTVEETISILRG 343 Query: 181 VLV----HEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYECC 236 + H +++S +A A LS+ R + + +D DE + E Sbjct: 344 LKEKYEVHHGVRISDSAIIAAATLSH----RYITERRLPDKAIDLIDEAAARLRMALE-- 397 Query: 237 GAPRPSDLKAVLKSILEDDWGTAHYTLNKVRSAKGLALIDLIEGIVKILEDYELQNEETR 296 AP D K LE + + + A+ I + + + + E R Sbjct: 398 SAPEEIDALERKKLQLEIEREALKKEKDPDSQERLKAIEAEIAKLTEEIAKLRAEWERER 457 Query: 297 VHLLTKLADIEYSISK 312 +L KL + ++ + + Sbjct: 458 -EILRKLREAQHRLDE 472 Score = 39.4 bits (90), Expect = 0.002, Method: Composition-based stats. Identities = 39/234 (16%), Positives = 76/234 (32%), Gaps = 55/234 (23%) Query: 27 VYGQNEVITTV-------RKFVDEGKLP--HLLFYGPPGTGKTSTIVALAREIYGKNYSN 77 V GQ+E I V R + + P LF GP G GKT LA ++ + Sbjct: 560 VVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAM 619 Query: 78 MVLELNASDDR--------GIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNAAQNA 129 + +++ ++ + T + + + +I+ DE + N Sbjct: 620 IRIDMTEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNI 679 Query: 130 LRRVIERYT-----------KNTRFCVLANYAHKLT------------------------ 154 L ++++ +NT + +N L Sbjct: 680 LLQILDDGRLTDSHGRTVDFRNTVIILTSNLGSPLILEGLQKGWPYERIRDEVFKVLQQH 739 Query: 155 --PALLSRCTRF-RFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNGDM 205 P L+R F+PL +E I + + L + + +L+ + + D Sbjct: 740 FRPEFLNRLDEIVVFRPLTKEQIRQIVEIQLSYLRARLAEKRISLELTEAAKDF 793 >6EMW-E nrPDB Length = 181 Score = 40.6 bits (93), Expect = 0.001, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 45/118 (38%), Gaps = 9/118 (7%) Query: 23 TLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLEL 82 TLD V G+++ IT V + + + + G PG GKT+ LA+ I + + Sbjct: 17 TLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDK 76 Query: 83 NASDDRGIDVV--RNQIKDFAS-----TRQIFSKGFKLIILDEADAM--TNAAQNALR 131 VV +F +I G ++ +DE + A+ A+ Sbjct: 77 RVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGNVILFIDELHTLVGAGGAEGAID 134 >2V1U-A nrPDB Length = 387 Score = 40.6 bits (93), Expect = 0.001, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 81/248 (32%), Gaps = 40/248 (16%) Query: 43 EGKLPH-LLFYGPPGTGKTSTIVALAREIYGKNYSNMVL----ELNASDDRGIDVVRNQI 97 G+ P L YG GTGKT+ + R + + S VL +NA V + I Sbjct: 40 RGEKPSNALLYGLTGTGKTAVARLVLRRLEARASSLGVLVKPIYVNARHRETPYRVASAI 99 Query: 98 KDFASTRQIFSK------------------GFKLIILDEADAMTN--AAQNALRRVIERY 137 + R F+ G +I+LDE D + Q+ L R+ Sbjct: 100 AEAVGVRVPFTGLSVGEVYERLVKRLSRLRGIYIIVLDEIDFLPKRPGGQDLLYRITRIN 159 Query: 138 TKN-----TRFCVLANY---AHKLTPALLSRCT--RFRFQPLPQEAIERRIANVLVHE-- 185 + + N L P + S F P + + Sbjct: 160 QELGDRVWVSLVGITNSLGFVENLEPRVKSSLGEVELVFPPYTAPQLRDILETRAEEAFN 219 Query: 186 KLKLSPNAE---KALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYECCGAPRPS 242 L P+ AL +GD RR L++L+ + E+ + + +Y Sbjct: 220 PGVLDPDVVPLCAALAAREHGDARRALDLLRVAGEIAERRREERVRREHVYSARAEIERD 279 Query: 243 DLKAVLKS 250 + V+++ Sbjct: 280 RVSEVVRT 287 >2R44-A nrPDB Length = 331 Score = 40.6 bits (93), Expect = 0.001, Method: Composition-based stats. Identities = 55/307 (17%), Positives = 101/307 (32%), Gaps = 57/307 (18%) Query: 27 VYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVL-ELNAS 85 V GQ +I + + G H+L G PG KT ++ LA+ + + +L S Sbjct: 29 VVGQKYMINRLLIGICTGG--HILLEGVPGLAKTLSVNTLAKTMDLDFHRIQFTPDLLPS 86 Query: 86 DDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNAAQNALRRVIER--------- 136 D G + +F + F I+ DE + Q+AL ++ Sbjct: 87 DLIGTMIYNQHKGNFEVKKGPVFSNF--ILADEVNRSPAKVQSALLECMQEKQVTIGDTT 144 Query: 137 YTKNTRFCVLANY-------AHKLTPALLSR-CTRFRFQPLPQEA---IERRIANVLVH- 184 Y + F VLA + L A + R + L +E+ + RR++N+ + Sbjct: 145 YPLDNPFLVLATQNPVEQEGTYPLPEAQVDRFMMKIHLTYLDKESELEVMRRVSNMNFNY 204 Query: 185 --EKLKLSPNAEKALIELSNGDMRRVLN------------------------VLQSCKAT 218 +K+ + + E++ + L +L Sbjct: 205 QVQKIVSKNDVLEIRNEINKVTISESLEKYIIELVFATRFPAEYGLEAEASYILYGASTR 264 Query: 219 LDNPDEDEISDDVIYECCGAPRPSDLKAVLKSILEDDWGTAHYTLNKVRSAKGLALIDLI 278 + P D+K V D LN A+G++ +I Sbjct: 265 AAINLNRVAKAMAFFNNRDYVLPEDIKEVAY-----DILNHRIILNYEAEAEGISTRQII 319 Query: 279 EGIVKIL 285 E I++ + Sbjct: 320 ETILRKV 326 >6QI8-A nrPDB Length = 456 Score = 40.6 bits (93), Expect = 0.001, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 47/104 (45%), Gaps = 10/104 (9%) Query: 27 VYGQNEVITTVRKFVDEGKL-----PHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVL- 80 + GQ V+ K +L GPPGTGKT+ +A+A+E+ K ++ Sbjct: 39 LVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVG 98 Query: 81 -ELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMT 123 E+ +++ + +V+ +++F + K K + E +T Sbjct: 99 SEVYSTEIKKTEVL---MENFRRAIGLRIKETKEVYEGEVTELT 139 >3JC7-2 nrPDB Length = 868 Score = 40.2 bits (92), Expect = 0.001, Method: Composition-based stats. Identities = 36/246 (14%), Positives = 83/246 (33%), Gaps = 41/246 (16%) Query: 49 LLFYGPPGTGKTSTIVALA----REIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTR 104 +L G PGT K+ + + R ++ + L AS + + + + Sbjct: 539 VLLLGDPGTAKSQILKYVEKTAHRAVFATGQGASAVGLTASVRKDP-ITKEWTLEGG-AL 596 Query: 105 QIFSKGFKLIILDEADAMTNAAQNALRRVIERYTKN-------------TRFCVLANYAH 151 + KG + ++DE D M + + ++ +E+ + + AN Sbjct: 597 VLADKG--VCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLQARCSIIAAANPNG 654 Query: 152 K-------------LTPALLSRCTRF-RFQPLPQEAIERRIANVLVHEKLKLSPNAEKAL 197 LT +LSR + L E + R+A +V ++ P + Sbjct: 655 GRYNSTLPLAQNVSLTEPILSRFDILCVVRDLVDEEADERLATFVVDSHVRSHPEND--- 711 Query: 198 IELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYECCGAPRPSDLKAVLKSILEDDWG 257 E G+ + N +S ++ ++++ + ++ + + +L Sbjct: 712 -EDREGE--ELKNNGESAIEQGEDEINEQLNARQRRLQRQRKKEEEISPIPQELLMKYIH 768 Query: 258 TAHYTL 263 A + Sbjct: 769 YARTKI 774 >3J3U-A nrPDB Length = 810 Score = 39.8 bits (91), Expect = 0.002, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 71/202 (35%), Gaps = 22/202 (10%) Query: 23 TLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLEL 82 +LD V G+++ I V + + + + G PG GKT+ LA++I ++ + Sbjct: 178 SLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDK 237 Query: 83 NASDDRGIDVV--RNQIKDFAS-----TRQIFSKGFKLIILDEADAM--TNAAQNALRRV 133 VV +F +I G ++ +D + A+ A+ Sbjct: 238 RVMTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDALHTLIGAGGAEGAIDAS 297 Query: 134 IERYTKNTRFCVLANYAHKLTP---------ALLSRCTRFRFQPLPQEAIERRIANVLV- 183 R + A L AL R + + + + + Sbjct: 298 NILKPSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIQVDQPSVDESIQILQGLRDR 357 Query: 184 ---HEKLKLSPNAEKALIELSN 202 H ++ ++ +A +A ++LS+ Sbjct: 358 YEAHHRVSITDDAIEAAVKLSD 379 Score = 38.3 bits (87), Expect = 0.005, Method: Composition-based stats. Identities = 32/152 (21%), Positives = 58/152 (38%), Gaps = 28/152 (18%) Query: 25 DEVYGQNEVITTVRK-------FVDEGKLP--HLLFYGPPGTGKTSTIVALAREIYGKNY 75 V GQ+E + V K + + K P +F GP G GKT ALA I+G Sbjct: 508 SRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESIFGDEE 567 Query: 76 SNMVLELNASDDR--------GIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNAAQ 127 S + ++++ ++ + T ++ K + +++LD + Sbjct: 568 SMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDAIEKAHPDVF 627 Query: 128 NALRRVIERYT-----------KNTRFCVLAN 148 N L +V+E +NT + +N Sbjct: 628 NILLQVLEDGRLTDSKGRTVDFRNTILIMTSN 659 >5BQ5-A nrPDB Length = 189 Score = 39.4 bits (90), Expect = 0.002, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 45/109 (41%), Gaps = 5/109 (4%) Query: 45 KLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTR 104 + ++LF GPPG GKT +++ E + Y + + D + R + + Sbjct: 38 RKENILFLGPPGIGKTHLAISIGMEAIARGYKTYFI---TAHDLVNQLRRADQEGKLEKK 94 Query: 105 QIFSKGFKLIILDEADAMTNAAQNA--LRRVIERYTKNTRFCVLANYAH 151 ++I+DE + +A L +VI R ++ + +N + Sbjct: 95 LRVFVKPTVLIIDEMGYLKLDPNSAHYLFQVIARRYEHAPIILTSNKSF 143 >1UM8-A nrPDB Length = 376 Score = 39.0 bits (89), Expect = 0.003, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 1/81 (1%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFS 108 +L GP G+GKT LA+ + + L + G DV + ++ Sbjct: 75 ILLIGPTGSGKTLMAQTLAKHLDIPIAISDATSLTEAGYVGEDVENILTRLLQASDWNVQ 134 Query: 109 KGFK-LIILDEADAMTNAAQN 128 K K ++ +DE D ++ ++N Sbjct: 135 KAQKGIVFIDEIDKISRLSEN 155 >4R7Y-A nrPDB Length = 613 Score = 38.6 bits (88), Expect = 0.004, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 76/209 (36%), Gaps = 25/209 (11%) Query: 48 HLLFYGPPGTGKTSTIVALA----REIYGKNYSNMVLELNASDDRGIDVVRNQIKDFAST 103 H+L G PG K+ + +A R IY S+ L A+ R + + + A Sbjct: 337 HVLLVGDPGVAKSQILRYVANLAPRAIYTSGKSSSAAGLTAAAVRD-EFTGGWVLE-AGA 394 Query: 104 RQIFSKGFKLIILDEADAMTNAAQNALRRVIERYTKNTR---FCVLANYAHKLTPALLSR 160 + G+ LI DE D M++ ++ + +E+ T + N + A + Sbjct: 395 LVLADGGYALI--DELDKMSDRDRSVIHEALEQQTISISKAGITATLNARTTVIAAANPK 452 Query: 161 CTRFRFQPLPQEAI--------ERRIANVLVHE-KLKLSPNAEKALIELSNGDMRRVL-- 209 RF P E I + VL+ E K+ + ++ + G+ V Sbjct: 453 QGRFNRMKNPFEQIDLPPTLLSRFDLIFVLIDEPDDKIDSEVARHILRVRRGESEVVAPK 512 Query: 210 ---NVLQSCKATLDNPDEDEISDDVIYEC 235 +L+ A IS++ + E Sbjct: 513 IPHEILRKYIAYARKNIHPVISEEAMEEI 541 >3PXG-A nrPDB Length = 468 Score = 38.6 bits (88), Expect = 0.004, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 74/189 (39%), Gaps = 13/189 (6%) Query: 23 TLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLEL 82 +LD V G+++ I V + + + + G PG GKT+ LA++I ++ + Sbjct: 178 SLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDK 237 Query: 83 NASDDRGIDVVRNQIKDFAST--RQIFSKGFKLIILDEADAMTNAAQNALRRVIERYTKN 140 R + +D +I G ++ +D A A N L+ + R Sbjct: 238 RVMTLDMGTKYRGEFEDRLKKVMDEIRQAGNIILFIDAA----IDASNILKPSLARGELQ 293 Query: 141 TRFCVLANYAHKLTPALLSRCTRFRFQPLPQEAIERRIANVL-------VHEKLKLSPNA 193 + K + RF+ + Q +++ I + H ++ ++ +A Sbjct: 294 CIGATTLDEYRKYIEKDAALERRFQPIQVDQPSVDESIQILQGLRDRYEAHHRVSITDDA 353 Query: 194 EKALIELSN 202 +A ++LS+ Sbjct: 354 IEAAVKLSD 362 >5OFO-C nrPDB Length = 871 Score = 38.6 bits (88), Expect = 0.004, Method: Composition-based stats. Identities = 56/347 (16%), Positives = 107/347 (30%), Gaps = 46/347 (13%) Query: 10 KENLPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALARE 69 K + E+ LD V G++E I + + + + G PG GKT+ + LA+ Sbjct: 167 KYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQR 226 Query: 70 IYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFK-------------LIIL 116 I + R + + + A R F + K ++ + Sbjct: 227 IINGEVPEGL-----KGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFI 281 Query: 117 DEADAM--TNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSRCTRFRFQPLPQEAI 174 D M A A+ R + A L ++ + A+ Sbjct: 282 DALHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY-----RQYIEK---DAAL 333 Query: 175 ERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYE 234 ERR V ++ + + +L+ K + +I+D I Sbjct: 334 ERRFQKV-----------------FVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVA 376 Query: 235 CCGAPRPSDLKAVLKSILEDDWGTAHYTLNKVRSAKGLALIDLIEGIVKILEDYELQNEE 294 L D A ++ +K L L I+++ + + +E Sbjct: 377 AATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKE 436 Query: 295 TRVHLLTKLADIEYSISKGGNDQIQGSAVIGAIKASFE-NETVKANV 340 + +L + +S + A KAS +T+KA + Sbjct: 437 SDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAEL 483 Score = 36.3 bits (82), Expect = 0.017, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 55/151 (36%), Gaps = 30/151 (19%) Query: 27 VYGQNEVITTVRKFVDEGK---------LPHLLFYGPPGTGKTSTIVALAREIYGKNYSN 77 V GQNE + V + + + LF GP G GKT ALA ++ + + Sbjct: 574 VIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAM 633 Query: 78 MVLELNASDDRGIDVVR---------NQIKDFASTRQIFSKGFKLIILDEADAMTNAAQN 128 + +++ + V R + T + + + +I+LD + N Sbjct: 634 VRIDM-SEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDAVEKAHPDVFN 692 Query: 129 ALRRVIERYT-----------KNTRFCVLAN 148 L +V++ +NT + +N Sbjct: 693 ILLQVLDDGRLTDGQGRTVDFRNTVVIMTSN 723 >1XXI-E nrPDB Length = 334 Score = 38.3 bits (87), Expect = 0.005, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 59/162 (36%), Gaps = 27/162 (16%) Query: 35 TTVRKFVDEGKLPH-LLFYGPPGTGKTSTIVALAREIY---------------------- 71 + G+ H LL PG G + I AL+R + Sbjct: 12 EKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAG 71 Query: 72 -GKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNAAQNAL 130 +Y + E + G+D VR + ++ K++ + +A +T+AA NAL Sbjct: 72 THPDYYTLAPEK-GKNTLGVDAVREVTEKLNEHARLGGA--KVVWVTDAALLTDAAANAL 128 Query: 131 RRVIERYTKNTRFCVLANYAHKLTPALLSRCTRFRFQPLPQE 172 + +E T F + +L L SRC P P++ Sbjct: 129 LKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQ 170 >1JBK-A nrPDB Length = 195 Score = 38.3 bits (87), Expect = 0.005, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 46/132 (34%), Gaps = 18/132 (13%) Query: 10 KENLPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALARE 69 K + E+ LD V G++E I + + + + G PG GKT+ + LA+ Sbjct: 7 KYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQR 66 Query: 70 IYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFK-------------LIIL 116 I + R + + + A R F + K ++ + Sbjct: 67 IINGEVPEGL-----KGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFI 121 Query: 117 DEADAMTNAAQN 128 DE M A + Sbjct: 122 DELHTMVGAGKA 133 >4HSE-A nrPDB Length = 397 Score = 37.9 bits (86), Expect = 0.006, Method: Composition-based stats. Identities = 56/316 (17%), Positives = 105/316 (33%), Gaps = 39/316 (12%) Query: 24 LDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELN 83 LD V G++E I V + + + + G PG GKT+ + LA+ I + + Sbjct: 32 LDPVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGL---- 87 Query: 84 ASDDRGIDVVRNQIKDFASTRQIFSKGFK-------------LIILDEADAMTN------ 124 R + + + A R F + K ++ +DE + Sbjct: 88 -KGKRIVSLQMGSLLAGAKYRGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAGKAEG 146 Query: 125 --AAQNALRRVIERYTKNTRFCVLANYAHKL--TPALLSRCTRFRFQPLPQEAIERRIAN 180 A N L+ + R + ++ PAL R E + Sbjct: 147 AVDAGNMLKPALARGELRLIGATTLDEYREIEKDPALERRFQPVYVDEPTVEETISILRG 206 Query: 181 VLV----HEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYECC 236 + H +++S +A A LS+ R + + +D DE + E Sbjct: 207 LKEKYEVHHGVRISDSAIIAAATLSH----RYITERRLPDKAIDLIDEAAARLRMALE-- 260 Query: 237 GAPRPSDLKAVLKSILEDDWGTAHYTLNKVRSAKGLALIDLIEGIVKILEDYELQNEETR 296 AP D K LE + + + A+ I + + + + E R Sbjct: 261 SAPEEIDALERKKLQLEIEREALKKEKDPDSQERLKAIEAEIAKLTEEIAKLRAEWERER 320 Query: 297 VHLLTKLADIEYSISK 312 +L KL + ++ + + Sbjct: 321 -EILRKLREAQHRLDE 335 >1R6B-X nrPDB Length = 758 Score = 37.5 bits (85), Expect = 0.009, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 68/206 (33%), Gaps = 33/206 (16%) Query: 24 LDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELN 83 +D + G+ + + + + + + L G G GKT+ LA I + ++ Sbjct: 185 IDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM---- 240 Query: 84 ASDDRGIDVVRNQIKDFASTRQIFSKGFK------------LIILDEADAMTNAAQNALR 131 +D + + R F K FK ++ +DE + A + Sbjct: 241 -ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGG 299 Query: 132 RVIE-------RYTKNTRFCVLANYAHKLTPALLSRCTRFRFQPLP--QEAIERRIANVL 182 +V + R Y R RFQ + + +IE + + Sbjct: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 Query: 183 -------VHEKLKLSPNAEKALIELS 201 H ++ + A +A +EL+ Sbjct: 360 GLKPKYEAHHDVRYTAKAVRAAVELA 385 Score = 31.7 bits (70), Expect = 0.43, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 48/147 (32%), Gaps = 25/147 (17%) Query: 27 VYGQNEVITTVRKFVDEGK---------LPHLLFYGPPGTGKT----STIVALAREIYGK 73 V+GQ++ I + + + + + LF GP G GKT AL E+ Sbjct: 460 VFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRF 519 Query: 74 NYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGF-KLIILDEADAMTNAAQNALRR 132 + S + S G K +++LDE + N L + Sbjct: 520 DMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQ 579 Query: 133 VIERYT-----------KNTRFCVLAN 148 V++ T +N + N Sbjct: 580 VMDNGTLTDNNGRKADFRNVVLVMTTN 606 >3J15-B nrPDB Length = 593 Score = 36.7 bits (83), Expect = 0.015, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 56/128 (43%), Gaps = 13/128 (10%) Query: 21 PETLDEVYGQNEVITTVRKF----VDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYS 76 PE LDE + + V +G + ++ GP GTGKT+ + LA ++ Sbjct: 76 PEQLDEDCVHRYGVNAFVLYRLPIVKDGMVVGIV--GPNGTGKTTAVKILAGQL-----I 128 Query: 77 NMVLELNASDDRGIDVVR-NQIKDFASTRQIFSKGFKLIILDEADAMTNAAQNALRRVIE 135 + E N S D I R N+++++ R + ++ D + A + +R +++ Sbjct: 129 PNLCEDNDSWDNVIRAFRGNELQNYFE-RLKNGEIRPVVKPQYVDLLPKAVKGKVRELLK 187 Query: 136 RYTKNTRF 143 + + +F Sbjct: 188 KVDEVGKF 195 >4I5O-A nrPDB Length = 363 Score = 36.7 bits (83), Expect = 0.016, Method: Composition-based stats. Identities = 30/133 (22%), Positives = 46/133 (34%), Gaps = 18/133 (13%) Query: 13 LPWVEKYRPETLDEVYGQNEVITTVR----------------KFVDEGKLPHLLFYGPPG 56 LP + R D V GQ + + V+ GK ++L GP G Sbjct: 3 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKS-NILLIGPTG 61 Query: 57 TGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFK-LII 115 +GKT LAR + L + G DV K K + ++ Sbjct: 62 SGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVY 121 Query: 116 LDEADAMTNAAQN 128 +DE D ++ + N Sbjct: 122 IDEIDKISRKSDN 134 >1FNN-A nrPDB Length = 389 Score = 36.3 bits (82), Expect = 0.018, Method: Composition-based stats. Identities = 39/229 (17%), Positives = 73/229 (31%), Gaps = 45/229 (19%) Query: 45 KLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTR 104 P G PGTGKT T+ L E+Y + + +N R + I + A + Sbjct: 43 HYPRATLLGRPGTGKTVTLRKLW-ELYKDKTTARFVYINGFIYRNFTAI---IGEIARSL 98 Query: 105 QIFSKGFKL---------------------IILDEADAMTNAAQNALRRVIERYTKNTRF 143 I L ++LD+A + + R+ + K F Sbjct: 99 NIPFPRRGLSRDEFLALLVEHLRERDLYMFLVLDDAFNLAPDILSTFIRLGQEADKLGAF 158 Query: 144 -----CVLANYA--HKLTPALLSRCT--RFRFQPLPQEAIERRIANVLVH--EKLKLSPN 192 V N A + L P+ RF P ++ I + + + S + Sbjct: 159 RIALVIVGHNDAVLNNLDPSTRGIMGKYVIRFSPYTKDQIFDILLDRAKAGLAEGSYSED 218 Query: 193 AEKALIELS---------NGDMRRVLNVLQSCKATLDNPDEDEISDDVI 232 + + +++ GD R +++L I+ + + Sbjct: 219 ILQMIADITGAQTPLDTNRGDARLAIDILYRSAYAAQQNGRKHIAPEDV 267 >2P65-A nrPDB Length = 187 Score = 36.3 bits (82), Expect = 0.021, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 66/177 (37%), Gaps = 19/177 (10%) Query: 20 RPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMV 79 R LD V G++ I + + + + G PG GKT+ + LA +I + + + Sbjct: 17 RAGKLDPVIGRDTEIRRAIQILSRRTKNNPILLGDPGVGKTAIVEGLAIKIVQGDVPDSL 76 Query: 80 --LELNASDDRGIDVVRNQIKDFASTRQIFSKGFK------LIILDEADAMTNA---AQN 128 +L + D + DF + K + ++ +DE + A A+ Sbjct: 77 KGRKLVSLDLSSLIAGAKYRGDFEERLKSILKEVQDAEGQVVMFIDEIHTVVGAGAVAEG 136 Query: 129 ALRRVIERYTKNTRFCVLANYAHKLTPALLSRCTRFRFQPLPQEAIERRIANVLVHE 185 AL R + + +S +F + +A+ERR +LV + Sbjct: 137 ALDAGNILKPMLARGELRC-----IGATTVSEYRQFIEK---DKALERRFQQILVEQ 185 >3R8F-A nrPDB Length = 324 Score = 36.3 bits (82), Expect = 0.022, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 81/224 (36%), Gaps = 15/224 (6%) Query: 18 KYRPETLDEVYGQNEVITTVRKFVD-EGKLPHLLF-YGPPGTGKTSTIVALAREIYGKNY 75 KY E G V++ ++ G L + +F YG GTGKT + A E + Y Sbjct: 7 KYTLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAKKRGY 66 Query: 76 SNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNAAQ---NALRR 132 + +++DD +V + K + + K L++LD+ ++ + Sbjct: 67 R---VIYSSADDFAQAMVEHLKKGTINEFRNMYKSVDLLLLDDVQFLSGKERTQIEFFHI 123 Query: 133 VIERYTKNTRFCVLANY-AHKLT---PALLSRC--TRFRFQPLPQEAIERRIANVLVHEK 186 Y + + ++ KL L+SR L + + I L Sbjct: 124 FNTLYLLEKQIILASDRHPQKLDGVSDRLVSRFEGGILVEIELDNKTRFKIIKEKLKEFN 183 Query: 187 LKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDD 230 L+L L+E + ++R + ++ K E + + Sbjct: 184 LELRKEVIDYLLENTK-NVREIEGKIKLIKLKGFEGLERKERKE 226 >2NZJ-A nrPDB Length = 175 Score = 35.6 bits (80), Expect = 0.032, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 46/127 (36%), Gaps = 19/127 (14%) Query: 49 LLFYGPPGTGKTSTIVALA-------REIYGKNYSNMVLELNASDDRGIDV----VRNQI 97 ++ G PG GKTS A E G++ L ++ D + V Sbjct: 7 VVLLGDPGVGKTSLASLFAGKQERDLHEQLGEDVYERTLTVDGEDTTLVVVDTWEAEKLD 66 Query: 98 KDFASTRQIFSKGFKLIILDEADAMTNAAQNALRRVIERYTK--NTRFCVLANYAHKLTP 155 K ++ + +I+ AD + + + LR + R + + ++ N A Sbjct: 67 KSWSQESCLQGGSAYVIVYSIADRGSFESASELRIQLRRTHQADHVPIILVGNKAD---- 122 Query: 156 ALLSRCT 162 L+RC Sbjct: 123 --LARCR 127 >5XF8-3 nrPDB Length = 997 Score = 35.6 bits (80), Expect = 0.033, Method: Composition-based stats. Identities = 30/208 (14%), Positives = 57/208 (27%), Gaps = 39/208 (18%) Query: 27 VYGQNEVITTV---------RKFVDEGKLPH---LLFYGPPGTGKTSTIVALAREIYGKN 74 +YG + + + + + L +L G P T K+ + + Sbjct: 397 IYGHDHIKKAILLMLMGGVEKNLENGSHLRGDINILMVGDPSTAKSQLLRFVLNTASLAI 456 Query: 75 YSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNAAQNALRRVI 134 + + R + + ++ +DE D MT+ + A+ V+ Sbjct: 457 ATTGRGSSGVGLTAAVTTDRETGERRLEAGAMVLADRGVVCIDEFDKMTDVDRVAIHEVM 516 Query: 135 ERYTKN-------------TRFCVLANYAHK-------------LTPALLSRCTRFRFQP 168 E+ T AN L +LLSR Sbjct: 517 EQQTVTIAKAGIHTTLNARCSVIAAANPVFGQYDVNRDPHQNIALPDSLLSRFDLLFVVT 576 Query: 169 LPQEAIERR-IANVLVHEKLKLSPNAEK 195 I R I+ ++ L P + Sbjct: 577 DDINEIRDRSISEHVLRTHRYLPPGYLE 604 >4XGC-D nrPDB Length = 459 Score = 35.6 bits (80), Expect = 0.035, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 9/89 (10%) Query: 37 VRKFVDEGKLPHLLFYGPPGTGKTS-----TIVALAREIYGKNYSNMVLELNASDDRGID 91 +++ + G+ LL GP G+GKT+ L + +G+N + L+ N D + Sbjct: 40 LQRTAEMGESNSLLLLGPRGSGKTTLINSVLADLLPNKSFGENTLIVHLDGNLHTDDRVA 99 Query: 92 V----VRNQIKDFASTRQIFSKGFKLIIL 116 + V+ Q+++ A + S L L Sbjct: 100 LKSITVQMQLENAADGKVFGSFAENLAFL 128 >2GA8-A nrPDB Length = 359 Score = 34.8 bits (78), Expect = 0.050, Method: Composition-based stats. Identities = 27/219 (12%), Positives = 74/219 (33%), Gaps = 16/219 (7%) Query: 31 NEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYS-----NMVLELNAS 85 ++V+ + +++ ++ G PG+GK++ L + I K ++ V+E+N Sbjct: 9 DDVLQLLDNRIEDNYRVCVILVGSPGSGKSTIAEELCQIINEKYHTFLSEHPNVIEVNDR 68 Query: 86 DDRGIDVVR-------NQIKDFASTRQIFSKGFKLIILDEA--DAMTNAAQNALRRVIER 136 +++V N++ + + +F + + A+T+ + V Sbjct: 69 LKPMVNLVDSLKTLQPNKVAEMIENQGLFKDHVEDVNFQPVKYSALTSNNEECTAVVARG 128 Query: 137 YTKNTRFCVLANYAHKLTPALLSRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKA 196 T N + + + P+ + RR ++ + + Sbjct: 129 GTANAIRIAAVDNPVNVNKLAQDSINIAQIVPMDGFHLSRRCLDLFKDPQTAHKRRGSPS 188 Query: 197 LIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYEC 235 + +N ++ +L + S ++E Sbjct: 189 TFDSNN--FLQLCKILAKTSLCKVSSHHKFYSTSSVFEK 225 >5U8S-7 nrPDB Length = 845 Score = 34.8 bits (78), Expect = 0.060, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 86/259 (33%), Gaps = 48/259 (18%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFS 108 + G PG K+ + A+ + S + G+ + +KD + I Sbjct: 456 VCLMGDPGVAKSQLLKAICK------ISPRGVYTTGKGSSGVGLTAAVMKDPVTDEMILE 509 Query: 109 KGFKLII------LDEADAMTNAAQNALRRVIERYTKN-------------TRFCVLANY 149 G ++ +DE D M + + A+ V+E+ T + T AN Sbjct: 510 GGALVLADNGICCIDEFDKMDESDRTAIHEVMEQQTISISKAGINTTLNARTSILAAANP 569 Query: 150 AHK-------------LTPALLSRCTR-FRFQPLPQEAIERRIANVLVHEKL-KLSPNAE 194 + L ALLSR F +P + ++A + + + P+ + Sbjct: 570 LYGRYNPRLSPLDNINLPAALLSRFDILFLMLDIPSRDDDEKLAEHVTYVHMHNKQPDLD 629 Query: 195 KALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYECCGAPRPSDLKAVLKSILED 254 +E S MR + A P E +D + + R + + S Sbjct: 630 FTPVEPSK--MREYI-----AYAKTKRPVMSEAVNDYVVQAYIRLRQDSKREM-DSKFSF 681 Query: 255 DWGTAHYTLNKVRSAKGLA 273 T L +R ++ LA Sbjct: 682 GQATPRTLLGIIRLSQALA 700 >1G8P-A nrPDB Length = 350 Score = 34.4 bits (77), Expect = 0.074, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Query: 17 EKYRPE-TLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALA 67 K RP + GQ ++ + + + +L +G GTGK++ + ALA Sbjct: 15 AKTRPVFPFSAIVGQEDMKLALLLTAVDPGIGGVLVFGDRGTGKSTAVRALA 66 >5UJ7-C nrPDB Length = 436 Score = 34.4 bits (77), Expect = 0.076, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 49/140 (35%), Gaps = 28/140 (20%) Query: 31 NEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTI-VALAREIYGKNYSNMVL--------- 80 + +++ G+ +L GP G+GKT I AL + + S VL Sbjct: 45 KHLSELLKRTALHGESNSVLIIGPRGSGKTMLINHALKELMEIEEVSENVLQVHLNGLLQ 104 Query: 81 ------------ELNASDDRGIDVVRNQIKDFASTRQIFSKG------FKLIILDEADAM 122 +LN + G V + ++ + + KG + ILDE D Sbjct: 105 INDKIALKEITRQLNLENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLF 164 Query: 123 TNAAQNALRRVIERYTKNTR 142 + L + +++ + Sbjct: 165 AHHKNQTLLYNLFDISQSAQ 184 >4WW4-B nrPDB Length = 513 Score = 34.0 bits (76), Expect = 0.087, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 6/59 (10%) Query: 20 RPETLDEVYGQNEVITTVR---KFVDEGKL--PHLLFYGPPGTGKTSTIVALAREIYGK 73 RP + + GQ + + + +GK+ +L GPP TGKT+ + +A+ + Sbjct: 65 RPSS-QGLVGQEKARKAAAVVLEMIKQGKIAGRAVLIAGPPSTGKTAIAMGMAQSLGQD 122 >5FM7-A nrPDB Length = 464 Score = 34.0 bits (76), Expect = 0.100, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 39/79 (49%), Gaps = 5/79 (6%) Query: 47 PHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVL--ELNASDDRGIDVVRNQIKDFASTR 104 +L G PGTGKT+ +A+++E+ K + E+ +++ + +V+ +++F Sbjct: 67 RGVLLAGGPGTGKTALALAISQELGTKIPFCPITGSEIYSTEVKKTEVL---MENFRRAI 123 Query: 105 QIFSKGFKLIILDEADAMT 123 + + K + E MT Sbjct: 124 GLRVRETKDVYEGEVTEMT 142 >2I3B-A nrPDB Length = 189 Score = 33.6 bits (75), Expect = 0.11, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 23/70 (32%), Gaps = 6/70 (8%) Query: 47 PHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDR-----GIDVVRNQIKDFA 101 H+ GPPG GKT+ I A E+ + + + G DVV Sbjct: 2 RHVFLTGPPGVGKTTLIHK-ASEVLKSSGVPVDGFYTEEVRQGGRRIGFDVVTLSGTRGP 60 Query: 102 STRQIFSKGF 111 +R Sbjct: 61 LSRVGLEPPP 70 >5C1S-A nrPDB Length = 391 Score = 33.6 bits (75), Expect = 0.11, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 83/259 (32%), Gaps = 32/259 (12%) Query: 49 LLFYGPPGTGKTSTIVAL--AREIYGKNYSNMVLELNASDDR-GIDVVRNQIKDFASTRQ 105 LL G G GKT+ + + G+ ++++ R I + Q +A Sbjct: 65 LLVVGSSGVGKTTLCDCFFESHQSQGEETREKHVQIDNDFIRISISDIAGQQSFYACDNP 124 Query: 106 IFSKGFKLIILD--EADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSR--C 161 L++ D E + T+ L + +T+ ++ N + +++R Sbjct: 125 YDGYDAILVMYDITELKSFTDLKTMWLPDIFLYCNIDTQIIIIGNKKDQEIDRIITRKEA 184 Query: 162 TRF------RFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSC 215 +F +F + + ++ + + L+ GD Sbjct: 185 EQFAQDRLCQFYEISTKDDSCQLLFDCISRDFLQCDIKIRMLMV---GDQNVGKTTFIRK 241 Query: 216 KATLDNPDEDEISDDVIYECCGAPRPSDLKAVLKSILEDDWGTAHYTLNKVRSAKGLALI 275 A D D + R +++ + I+ DWG + L Sbjct: 242 FALQDPTGHD-------FMNAITTR-FEMEKIKYEIIMIDWGFYNKLLQT--------NP 285 Query: 276 DLIEGIVKILEDYELQNEE 294 + I IL Y++ NEE Sbjct: 286 AISRTIEAILIVYDITNEE 304 >6J5T-G nrPDB Length = 852 Score = 33.6 bits (75), Expect = 0.11, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 47/140 (33%), Gaps = 22/140 (15%) Query: 16 VEKYRPETLD--EVYGQNEVITTVRKFVDEGKLPHLL---FYGPPGTGKTSTIVALAREI 70 +++ D +V G +++++ LL F G G GKT+ +A+E+ Sbjct: 147 TDRWSSPVYDHTQVVGLEGDKRKIKEWLFRSNDSQLLIMAFVGMGGLGKTT----IAQEV 202 Query: 71 YGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNAAQNAL 130 + E QI + I+ + DA L Sbjct: 203 FNDKEIEHRFERRIWVSVSQTFTEEQI-------------MRSILRNLGDASVGDDIGTL 249 Query: 131 RRVIERYTKNTRFCVLANYA 150 R I++Y R+ ++ + Sbjct: 250 LRKIQQYLLGKRYLIVMDDV 269 >2AKY-A nrPDB Length = 220 Score = 33.6 bits (75), Expect = 0.12, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 63/175 (36%), Gaps = 30/175 (17%) Query: 49 LLFYGPPGTGKTSTI-------------------VALAREIYGKNYSNMVLELNA--SDD 87 ++ GPPG GK + +A+ + +++ SDD Sbjct: 7 MVLIGPPGAGKGTQAPNLQERFHAAHLATGDMLRSQIAKGTQLGLEAKKIMDQGGLVSDD 66 Query: 88 RGIDVVRNQIKDFASTRQIF---SKGFKLIILDEADAMTNAAQNALRRVIERYTKNTRFC 144 ++++++++ + + + F + ++ D M L + IE K Sbjct: 67 IMVNMIKDELTNNPACKNGFILDGFPRTIPQAEKLDQMLKEQGTPLEKAIEL--KVDDEL 124 Query: 145 VLANYAHKLTPALLSRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIE 199 ++A +L R F P P+E ++ +V ++ S + AL + Sbjct: 125 LVARITGRLIHPASGRSYHKIFNP-PKEDMKD---DVTGEALVQRSDDNADALKK 175 >5D0U-A nrPDB Length = 714 Score = 33.6 bits (75), Expect = 0.12, Method: Composition-based stats. Identities = 44/282 (15%), Positives = 82/282 (29%), Gaps = 47/282 (16%) Query: 8 RSKENLPWVEKYRPETLDEVYGQNEVITTVRKFV-DEGKLPHLLFYG--PPGTGK----- 59 +++ LP V K R E LD + ++ ++P + Y P TGK Sbjct: 33 KARRKLP-VNKQRQEFLDLYHNNQILVFVGETGSGKTTQIPQYVLYDELPHQTGKLIACT 91 Query: 60 -------TSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKG-- 110 S +A E+ K + + + + + D R+ Sbjct: 92 QPRRVAAMSVAQRVADELDVKLGEEVGYSIRFENKTSSKTLLKYMTDGQLLREAMHDRDM 151 Query: 111 --FKLIILDEAD--AMTNAAQNALRRVIERYTKNTRFCVLANYAHK-------LTPALL- 158 + IILDEA + AL + + K+ + V++ LL Sbjct: 152 SRYSCIILDEAHERTLATDILMALLKQLSERRKDLKIIVMSATLDAQKFQSYFFNAPLLA 211 Query: 159 --SRCTRFRFQPLPQ------EAIERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLN 210 R P+ EA R + + P + L ++ Sbjct: 212 VPGRTHPVEIFYTPEAERDYVEAAIRTVLQIH-----ACEPEGDILLFLTGEEEIEDAC- 265 Query: 211 VLQSCKATLDNPD-EDEISDDVIYECCGAPRPSDLKAVLKSI 251 + +D E + +Y G P + + + Sbjct: 266 --RRISLEVDEMIRESDAGPMSVYPLYGTLPPHQQQRIFEKA 305 >3F9V-A nrPDB Length = 595 Score = 33.6 bits (75), Expect = 0.14, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 73/210 (34%), Gaps = 24/210 (11%) Query: 1 MSTSTEKRSKE--NLPWV-EKYRPETLDEVYGQNEVITTVR--------KFVDEGKLP-- 47 +S EK+ K+ PW+ ++ +YG E+ + K +++ ++ Sbjct: 268 ISEEDEKKIKDLAKDPWIRDRIISSIAPSIYGHWELKEALALALFGGVPKVLEDTRIRGD 327 Query: 48 -HLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQI 106 H+L G PGT K+ + ++R Y+ A + + + + + Sbjct: 328 IHILIIGDPGTAKSQMLQFISRVAPRAVYTTGKGSTAAGLTAAVVREKGTGEYYLEAGAL 387 Query: 107 FSKGFKLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSRCTRFRF 166 + ++DE D M + + A+ +E+ T + + L +R Sbjct: 388 VLADGGIAVIDEIDKMRDEDRVAIHEAMEQQTVSIA-------KAGIVAKLNARAAVI-- 438 Query: 167 QPLPQEAIERRIANVLVHEKLKLSPNAEKA 196 R I+ V + + L P Sbjct: 439 -AAGNPKFGRYISERPVSDNINLPPTILSR 467 >5M7N-A nrPDB Length = 454 Score = 33.3 bits (74), Expect = 0.15, Method: Composition-based stats. Identities = 50/277 (18%), Positives = 92/277 (33%), Gaps = 41/277 (14%) Query: 1 MSTSTEKRSKENLPWVEKYRPETLDEVYGQNEVITTVRKFVDE--GKLPHLLFYGPPGTG 58 + TS KR +L + R E+ G + + +R+ ++ ++ GP G G Sbjct: 121 LETSKLKREVSDL----RKRTGDQLELVGTSLAMNQLRQTIERVAPTNSRIMITGPSGAG 176 Query: 59 KTSTIVAL-AREIYGKNYSNMVLELNASDDRG-IDVVRNQIKDFASTRQIFSKGF-KLII 115 K A+ A+ V + +R I++ ++ + ++ Sbjct: 177 KELVARAIHAQSSRANGPFVTVNAATITPERMEIELFGTEMDGGERKVGALEEAHGGILY 236 Query: 116 LDEADAMTNAAQNALRRVI-----ERYTKNTRFCV-------LANYAHKLTPALLSRCTR 163 LDE M QN + RV+ ER R V A + R Sbjct: 237 LDEVADMPRETQNKILRVLVDQQFERVGGTKRVKVDVRIISSTAQNLEGMIAEGTFREDL 296 Query: 164 FR---FQPLPQEAIERR-----------IANVLVHEKL---KLSPNAEKAL-IELSNGDM 205 F P+ A+ R + + + K+ P+A L G++ Sbjct: 297 FHRLSVVPVQVPALAARREDIPSLVEFFMKQIAEQAGIKPRKIGPDAMAVLQAHSWPGNL 356 Query: 206 RRVLNVLQ--SCKATLDNPDEDEISDDVIYECCGAPR 240 R++ N ++ D+PDE +D + E Sbjct: 357 RQLRNNVERLMILTRGDDPDELVTADLLPAEIGDTLP 393 >3UPU-A nrPDB Length = 459 Score = 33.3 bits (74), Expect = 0.15, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 2/59 (3%) Query: 23 TLDEVY-GQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVL 80 T D++ GQ V K + E K H+ GP GTG T+ + + + ++L Sbjct: 22 TFDDLTEGQKNAFNIVMKAIKEKK-HHVTINGPAGTGATTLTKFIIEALISTGETGIIL 79 >1Z6G-A nrPDB Length = 218 Score = 33.3 bits (74), Expect = 0.15, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 60/165 (36%), Gaps = 8/165 (4%) Query: 45 KLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTR 104 + L+ GP G GK + I L E NY ++ + + + + + + + Sbjct: 22 NIYPLVICGPSGVGKGTLIKKLLNEF--PNY--FYFSVSCTTRKKREKEKEGVDYYFIDK 77 Query: 105 QIFSKGFKLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLA---NYAHKLTPALLSRC 161 IF K E D N L+ ++ + + C+ N +L + + Sbjct: 78 TIFEDKLKNEDFLEYDNYANNFYGTLKSEYDKAKEQNKICLFEMNINGVKQLKKSTHIKN 137 Query: 162 TRFRF-QPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNGDM 205 + F +P + + R+ + ++ E+ IEL ++ Sbjct: 138 ALYIFIKPPSTDVLLSRLLTRNTENQEQIQKRMEQLNIELHEANL 182 >4FDG-B nrPDB Length = 692 Score = 33.3 bits (74), Expect = 0.18, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 73/210 (34%), Gaps = 24/210 (11%) Query: 1 MSTSTEKRSKE--NLPWV-EKYRPETLDEVYGQNEVITTVR--------KFVDEGKLP-- 47 +S EK+ K+ PW+ ++ +YG E+ + K +++ ++ Sbjct: 280 ISEEDEKKIKDLAKDPWIRDRIISSIAPSIYGHWELKEALALALFGGVPKVLEDTRIRGD 339 Query: 48 -HLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQI 106 H+L G PGT K+ + ++R Y+ A + + + + + Sbjct: 340 IHILIIGDPGTAKSQMLQFISRVAPRAVYTTGKGSTAAGLTAAVVREKGTGEYYLEAGAL 399 Query: 107 FSKGFKLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSRCTRFRF 166 + ++DE D M + + A+ +E+ T + + L +R Sbjct: 400 VLADGGIAVIDEIDKMRDEDRVAIHEAMEQQTVSIA-------KAGIVAKLNARAAVI-- 450 Query: 167 QPLPQEAIERRIANVLVHEKLKLSPNAEKA 196 R I+ V + + L P Sbjct: 451 -AAGNPKFGRYISERPVSDNINLPPTILSR 479 >2W58-A nrPDB Length = 202 Score = 32.9 bits (73), Expect = 0.20, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 42/95 (44%), Gaps = 11/95 (11%) Query: 36 TVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRN 95 V ++ K+ L +G G GKT + A+A E+ +N S++++ + ++ R Sbjct: 44 FVAEYEPGKKMKGLYLHGSFGVGKTYLLAAIANELAKRNVSSLIVYV-------PELFRE 96 Query: 96 ----QIKDFASTRQIFSKGFKLIILDEADAMTNAA 126 + + + K +++LD+ A ++ Sbjct: 97 LKHSLQDQTMNEKLDYIKKVPVLMLDDLGAEAMSS 131 >1V43-A nrPDB Length = 372 Score = 32.9 bits (73), Expect = 0.21, Method: Composition-based stats. Identities = 54/304 (17%), Positives = 109/304 (35%), Gaps = 37/304 (12%) Query: 22 ETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALA---REIYGKNY-SN 77 E L + +G + + + +G+ L+ GP G GKT+T+ +A G+ Y + Sbjct: 15 ENLTKRFGNFTAVNKLNLTIKDGEF--LVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGD 72 Query: 78 MVLELNASDDRGIDVV--RNQIKDFASTRQIFSKGFKLIIL--DEADAMTNAAQNALR-- 131 + DR I +V + + + + K+ DE D A L+ Sbjct: 73 RDVTYLPPKDRNISMVFQSYAVWPHMTVYENIAFPLKIKKFPKDEIDKRVRWAAELLQIE 132 Query: 132 RVIERYTKNT-----------RFCVLANYAHKLTPALLSRCTRFRFQPLPQEAIERRIAN 180 ++ RY R V+ + L S + E +++ Sbjct: 133 ELLNRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPL-SNLDAKLRVAMRAE--IKKLQQ 189 Query: 181 VLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYECCGAPR 240 L + ++ + +A ++ GD V+N + + +P E + + ++ Sbjct: 190 KLKVTTIYVTHDQVEA---MTMGDRIAVMN--RGQLLQIGSPTEVYLRPNSVFVATFIGA 244 Query: 241 PSDLKAVLKSILEDDWGTAHYTLNKVRSAKGLALIDLIEGIVKILEDYELQNEETRVHLL 300 P +ILE G + R L+DL++ V + ++ E V + Sbjct: 245 PE------MNILEVSVGDGYLEGRGFRIELPQDLMDLLKDYVGKTVLFGIRPEHMTVEGV 298 Query: 301 TKLA 304 ++LA Sbjct: 299 SELA 302 >3IIK-A nrPDB Length = 180 Score = 32.9 bits (73), Expect = 0.21, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 15/26 (57%) Query: 42 DEGKLPHLLFYGPPGTGKTSTIVALA 67 + LP++L G PG GKT+ LA Sbjct: 7 EFMLLPNILLTGTPGVGKTTLGKELA 32 >5JZV-A nrPDB Length = 206 Score = 32.9 bits (73), Expect = 0.22, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 14/22 (63%) Query: 46 LPHLLFYGPPGTGKTSTIVALA 67 LP++L G PG GKT+ LA Sbjct: 37 LPNILLTGTPGVGKTTLGKELA 58 >5WWP-B nrPDB Length = 600 Score = 32.9 bits (73), Expect = 0.24, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 19/41 (46%) Query: 27 VYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALA 67 + E + V F G ++ GPPGTGK+ + LA Sbjct: 258 ITVPEEFASHVANFQKSGYSKYVTVQGPPGTGKSHFAIGLA 298 >1U0J-A nrPDB Length = 267 Score = 32.5 bits (72), Expect = 0.24, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 45/152 (29%), Gaps = 15/152 (9%) Query: 42 DEGKLPHLLFYGPPGTGKTSTIVALAREIY---GKNYSNMVLELNASDDRGI---DVVRN 95 GK + +GP TGKT+ A+A + N++N N D+ + + + Sbjct: 100 KFGKRNTIWLFGPATTGKTNIAEAIAHTVPFYGCVNWTNENFPFNDCVDKMVIWWEEGKM 159 Query: 96 QIKDFASTRQIFSKGFKLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTP 155 K S + I D ++ + T NT C + + Sbjct: 160 TAKVVESAKAILGGSKV-----RVDQKCKSSAQ-IDPTPVIVTSNTNMCAVIDGNSTTFE 213 Query: 156 ---ALLSRCTRFRFQPLPQEAIERRIANVLVH 184 L R +F + + Sbjct: 214 HQQPLQDRMFKFELTRRLDHDFGKVTKQEVKD 245 >5V8F-A nrPDB Length = 913 Score = 32.5 bits (72), Expect = 0.26, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 45/119 (37%), Gaps = 24/119 (20%) Query: 53 GPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVR------------------ 94 G PG GKT T+ + +E+ + + + + G+ +V+ Sbjct: 479 GTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNKVSGERLT 538 Query: 95 -----NQIKDFASTRQIFSKGFKLIILDEADAMTNAAQNALRRVIERYT-KNTRFCVLA 147 ++ + K +++LDE DAM +Q+ + T +N + V+A Sbjct: 539 WAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKSQDIMYNFFNWTTYENAKLIVIA 597 >4OI0-A nrPDB Length = 431 Score = 32.5 bits (72), Expect = 0.28, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 3/78 (3%) Query: 41 VDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGI---DVVRNQI 97 ++ K P LL GP GKT+ L + + + +EL+ + V + Sbjct: 112 SNKAKGPRLLLVGPTDVGKTTVSRILCNYSVRQGRTPIFVELDVGQNSVSVPGTVAAVLV 171 Query: 98 KDFASTRQIFSKGFKLII 115 + A F + ++ Sbjct: 172 QKTADVIDGFERNQPIVF 189 >3EC2-A nrPDB Length = 180 Score = 32.5 bits (72), Expect = 0.29, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 56/142 (39%), Gaps = 16/142 (11%) Query: 17 EKYRPETLDEVYGQNEVITTVRKFV-----DEGKLPHLLFYGPPGTGKTSTIVALAREIY 71 + Y P+ QN + T+R FV +EGK L F G PG GKT VA + IY Sbjct: 10 DTYHPKN----VSQNRALLTIRVFVHNFNPEEGK--GLTFVGSPGVGKTHLAVATLKAIY 63 Query: 72 GKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNAA-QNAL 130 K + + ++ KD + + + +++LD+ + + Q L Sbjct: 64 EKKGIRGYFFDTKDLIFRLKHLMDEGKDTKFLKTVLNSP--VLVLDDLGSERLSDWQREL 121 Query: 131 RRVIERYTKNT--RFCVLANYA 150 I Y N + NY+ Sbjct: 122 ISYIITYRYNNLKSTIITTNYS 143 >3JC6-4 nrPDB Length = 933 Score = 32.1 bits (71), Expect = 0.32, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 49/136 (36%), Gaps = 17/136 (12%) Query: 38 RKFVDEGKLPH---LLFYGPPGTGKTSTI----VALAREIYGKNYSNMVLELNASDDRGI 90 + F G+ +L G P T K+ + R +Y + + L A R + Sbjct: 550 KTFTKGGRYRGDINILLCGDPSTSKSQILQYVHKITPRGVYTSGKGSSAVGLTAYITRDV 609 Query: 91 DVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNAAQNALRRVIERYTKNTR---FCVLA 147 D + ++ A + +DE D M+++ ++ L V+E+ T + Sbjct: 610 DTKQLVLESGALVLSDGG----VCCIDEFDKMSDSTRSVLHEVMEQQTISIAKAGIITTL 665 Query: 148 NYAHKLTP---ALLSR 160 N + + SR Sbjct: 666 NARSSILASANPIGSR 681 >5G3Y-A nrPDB Length = 226 Score = 32.1 bits (71), Expect = 0.33, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 49/131 (37%), Gaps = 8/131 (6%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFS 108 L+ GPPG GK + + E + S + A+ G ++ + K++ ++ Sbjct: 3 LILLGPPGAGKGTQAEKIVEEYGIPHISTGDMFR-AAIKEGTEL-GLKAKEYMDKGELVP 60 Query: 109 KGFKLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSRCTRFRFQP 168 + ++ E + + + L ++ + + A K+ L + Sbjct: 61 DEVTIGLVKERLSQPDCKKGFL---LDGFPRTV---AQAEALDKILKELGIKLDAVINIE 114 Query: 169 LPQEAIERRIA 179 +P+E + R+ Sbjct: 115 VPREELLERLT 125 >5J1S-A nrPDB Length = 284 Score = 32.1 bits (71), Expect = 0.34, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 38/92 (41%), Gaps = 6/92 (6%) Query: 51 FYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASD-----DRGIDVVRNQIKDFASTRQ 105 +G GTGK +A IY ++ + L + I + ++Q++ + Sbjct: 52 LHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRG-N 110 Query: 106 IFSKGFKLIILDEADAMTNAAQNALRRVIERY 137 + + + I D+ D M +A++ ++ Y Sbjct: 111 VSACARSIFIFDQMDKMHAGLIDAIKPFLDYY 142 >5L3S-B nrPDB Length = 296 Score = 32.1 bits (71), Expect = 0.38, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Query: 22 ETLDEVYGQNEVITTVRKFVDEGKLPHLL-FYGPPGTGKTSTIVALAREIYGKNYSNMV 79 +++ E+ +N+ + K GK P ++ F+G G GKT+TI + + N S ++ Sbjct: 76 KSITEILTKNQKTDLIEKIRSSGKKPFVIIFFGVNGVGKTTTIAKVVNMLKKNNLSTII 134 >4F4J-A nrPDB Length = 202 Score = 32.1 bits (71), Expect = 0.38, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 59/168 (35%), Gaps = 31/168 (18%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFS 108 ++ GP GTGK++ + L E Y + S R ++ Sbjct: 20 IVISGPSGTGKSTLLKKLFAE-----YPDSFGFSVPSTTRTP-----------RAGEVNG 63 Query: 109 KGFKLIILDEADAMTNAAQ------------NALRRVIERYTKNTRFCVLANYAHKL--T 154 K + + +DE +M + + +++ +K+ + C+L + Sbjct: 64 KDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYGSTVASVKQVSKSGKTCILDIDMQGVKSV 123 Query: 155 PALLSRCTRFRFQPLPQ-EAIERRIANVLVHEKLKLSPNAEKALIELS 201 A+ RF F P E +++R+ + ++ A EL+ Sbjct: 124 KAIPELNARFLFIAPPSVEDLKKRLEGRGTETEESINKRLSAAQAELA 171 >2V3C-C nrPDB Length = 432 Score = 31.7 bits (70), Expect = 0.43, Method: Composition-based stats. Identities = 42/239 (17%), Positives = 76/239 (31%), Gaps = 29/239 (12%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFS 108 +L G G+GKT+T LAR I + ++ + + +Q+ Sbjct: 102 ILLVGIQGSGKTTTAAKLARYIQKRGLKPALIAADTYRPAA----------YEQLKQLAE 151 Query: 109 KGFKLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSRCTRFRFQP 168 K I DE T + + ++ +E++ K + HK LL + + Sbjct: 152 KIHVPIYGDE--TRTKSPVDIVKEGMEKFKKADVLIIDTAGRHKEEKGLLEEMKQIKEIT 209 Query: 169 LPQEAIERRIANVLVHEKLKLS------PNAEKALIELSNGDMR--RVLNVLQSCKATLD 220 P E I + ++ ++ +G + L+ + KA + Sbjct: 210 NPDEIILVIDGTIGQQAGIQAKAFKEAVGEIGSIIVTKLDGSAKGGGALSAVAETKAPIK 269 Query: 221 NPDEDEISDDVIYECCGAPRPSDLKAVLKSIL-EDDWGTAHYTLNKVRSAKGLALIDLI 278 E DD P D K + +L D + + K ID I Sbjct: 270 FIGIGEGIDD--------LEPFDPKKFISRLLGMGDLESLLEKAEDMVDEKTEESIDAI 320 >2YVU-A nrPDB Length = 186 Score = 31.7 bits (70), Expect = 0.44, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 39/94 (41%), Gaps = 6/94 (6%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELN---ASDDRGIDVVRNQ-IKDFASTR 104 + G PG+GKT+ LA + + Y VL+ + + G R + ++ Sbjct: 16 VWLTGLPGSGKTTIATRLADLLQKEGYRVEVLDGDWARTTVSEGAGFTREERLRHLKRIA 75 Query: 105 QI--FSKGFKLIILDEADAMTNAAQNALRRVIER 136 I +I++ + A+N +RR++E Sbjct: 76 WIARLLARNGVIVICSFVSPYKQARNMVRRIVEE 109 >2QGZ-A nrPDB Length = 308 Score = 31.7 bits (70), Expect = 0.45, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 52/130 (40%), Gaps = 13/130 (10%) Query: 19 YRPETLDEV-YGQNEVITTVRKFVDE------GKLPHLLFYGPPGTGKTSTIVALAREIY 71 YR L ++ + +D + L YG G GK+ + A+A E+ Sbjct: 118 YRHIHLSDIDVNNASRMEAFSAILDFVEQYPSAEQKGLYLYGDMGIGKSYLLAAMAHELS 177 Query: 72 GKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFS-KGFKLIILDEADAMTNAA--QN 128 K + L S V+N I + + +I + K ++ILD+ A + ++ Sbjct: 178 EKKGVSTTLLHFPSF---AIDVKNAISNGSVKEEIDAVKNVPVLILDDIGAEQATSWVRD 234 Query: 129 ALRRVIERYT 138 + +VI +Y Sbjct: 235 EVLQVILQYR 244 >1Y63-A nrPDB Length = 184 Score = 31.7 bits (70), Expect = 0.48, Method: Composition-based stats. Identities = 13/32 (40%), Positives = 20/32 (62%) Query: 41 VDEGKLPHLLFYGPPGTGKTSTIVALAREIYG 72 +++ K ++L G PGTGKTS +A E+ G Sbjct: 5 MEQPKGINILITGTPGTGKTSMAEMIAAELDG 36 >3MD0-A nrPDB Length = 355 Score = 31.7 bits (70), Expect = 0.51, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 22/47 (46%) Query: 42 DEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDR 88 D G + G PG GK++ I AL + + + VL ++ S R Sbjct: 75 DSGNAHRVGITGVPGVGKSTAIEALGMHLIERGHRVAVLAVDPSSTR 121 >3TK1-A nrPDB Length = 330 Score = 31.7 bits (70), Expect = 0.52, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 25/48 (52%) Query: 42 DEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRG 89 D G+ H+ G PG GK+++I AL + + + VL ++ S R Sbjct: 52 DAGRAMHVGITGVPGVGKSTSIEALGMHLIEQGHRVAVLAVDPSSVRS 99 >2PJZ-A nrPDB Length = 263 Score = 31.3 bits (69), Expect = 0.56, Method: Composition-based stats. Identities = 38/238 (15%), Positives = 75/238 (31%), Gaps = 20/238 (8%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFS 108 ++ GP G+GKT+ L R I G + + +N + R I + +I Sbjct: 33 VIILGPNGSGKTT----LLRAISGLLPYSGNIFINGMEVRKIRNYIRYSTNLPEAYEIGV 88 Query: 109 KGFKLIIL-DEADAMTNA-----------AQNALRRVIERYTKNTRFCVLANYAHKLTPA 156 ++ L +E + + LRR + + + V + A P Sbjct: 89 TVNDIVYLYEELKGLDRDLFLEMLKALKLGEEILRRKLYKLSAGQSVLVRTSLALASQPE 148 Query: 157 LLSRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCK 216 ++ F + + R E + ++ + + V N LQ Sbjct: 149 IVGLDEPFENVDAARRHVISRYIKEYGKEGILVTHELDMLNLYKEYKAYFLVGNRLQGPI 208 Query: 217 ATLDNPDEDEISDDVIYECCGAPRPSDLKAVLKSILEDDWGTAHYTLNKVRSAKGLAL 274 + + + + E A D+ SI++ D G L + G+ Sbjct: 209 SVSELLESSIVEG----ERNDALLVLDIMDKKVSIVKGDLGMKFGALGSLNRIYGIIG 262 >5HE8-A nrPDB Length = 174 Score = 31.3 bits (69), Expect = 0.57, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 11/78 (14%) Query: 48 HLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFAS----T 103 L YGP GTGK+ + A+A ++ K + ++ L + +R F Sbjct: 27 GLYLYGPFGTGKSFILGAIANQLKSKKVRSTIIYL-------PEFIRTLKGGFKDGSFEK 79 Query: 104 RQIFSKGFKLIILDEADA 121 + + +++LD+ A Sbjct: 80 KLHRVREANILMLDDIGA 97 >3L0S-A nrPDB Length = 223 Score = 31.3 bits (69), Expect = 0.58, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 70/183 (38%), Gaps = 17/183 (9%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFS 108 +L +GP G+GK + + + + + + G + + K+F + Sbjct: 3 ILIFGPNGSGKGTQGNLVKDKYSLAHIESGGIFR--EHIGGGTELGKKAKEFIDRGDLVP 60 Query: 109 KGFKLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSRCTRFRF-- 166 + ++ E T ++ +++ + +NT A KL AL + + F Sbjct: 61 DDITIPMVLE----TLESKGKDGWLLDGFPRNTV------QAQKLFEALQEKGMKINFVI 110 Query: 167 -QPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDNPDED 225 LP+E + RI + + PN NGD+ RV S +A D+ DE Sbjct: 111 EILLPREVAKNRIMGRRICKNNPNHPNNIFIEAIKPNGDVCRVCGGALSARA--DDQDEG 168 Query: 226 EIS 228 I+ Sbjct: 169 AIN 171 >3NXS-A nrPDB Length = 329 Score = 31.3 bits (69), Expect = 0.59, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 23/47 (48%) Query: 42 DEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDR 88 + G H+ G PG GK++TI AL + + VL ++ S R Sbjct: 53 EAGSAMHVGITGVPGVGKSTTIEALGMHLIEAGHRVAVLAVDPSSTR 99 >2SHK-A nrPDB Length = 173 Score = 31.3 bits (69), Expect = 0.59, Method: Composition-based stats. Identities = 25/168 (14%), Positives = 56/168 (33%), Gaps = 3/168 (1%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFS 108 + G G GKT+ LAR + + + + S DVV + + R+ S Sbjct: 5 IFMVGARGCGKTTVGRELARALGYEFVDTDIFMQHTSGMTVADVV--AAEGWPGFRRRES 62 Query: 109 KGFKLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSRCTRFRFQP 168 + + + T L + + + L A +L L + + +P Sbjct: 63 EALQAVATPNRVVATGGGMVLLEQNRQFMRAHGTVVYLFAPAEELALRLQASP-QAHQRP 121 Query: 169 LPQEAIERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCK 216 ++ E+ L + +++ + V ++Q+ + Sbjct: 122 TLTGRPIAEEMEAVLREREALYQDVAHYVVDATQPPAAIVCELMQTMR 169 >2QOR-A nrPDB Length = 204 Score = 31.3 bits (69), Expect = 0.69, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 53/163 (32%), Gaps = 12/163 (7%) Query: 44 GKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGI-DVVRNQIKDFAS 102 ++P L+ GP G GK + I + E + + + R + N + + Sbjct: 10 ARIPPLVVCGPSGVGKGTLIKKVLSE-----FPSRFRFSISCTTRNKREKETNGVDYYFV 64 Query: 103 TRQIFSKGFKLIILDEADAMTNAAQNALRRVIERYT---KNTRFCVLANYAHKLTPALLS 159 + F + K E D N L+ + K F + N +L + Sbjct: 65 DKDDFERKLKEGQFLEFDKYANNFYGTLKSEYDLAVGEGKICLFEMNINGVKQLKESKHI 124 Query: 160 RCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSN 202 + + F P I + L + + K + EL+ Sbjct: 125 QDGIYIFVKPPSIDI---LLGRLKNRNTEKPEEINKRMQELTR 164 >5U1D-B nrPDB Length = 686 Score = 30.9 bits (68), Expect = 0.80, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 31/82 (37%), Gaps = 11/82 (13%) Query: 10 KENLPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFY----------GPPGTGK 59 + NLP P TL V +V D L L F GP G+GK Sbjct: 450 QPNLPSPGTLAPTTLQGVVKFQDVSFAYPNRPDRPVLKGLTFTLRPGEVTALVGPNGSGK 509 Query: 60 TSTIVALAREIYGKNYSNMVLE 81 ++ AL + +Y ++L+ Sbjct: 510 STVA-ALLQNLYQPTGGQVLLD 530 >4Y0A-A nrPDB Length = 179 Score = 30.9 bits (68), Expect = 0.82, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 7/76 (9%) Query: 46 LPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQ 105 LP++ GP G GKT+ LA E+ G+ + + E+ +R I F + Sbjct: 8 LPNIYLVGPMGAGKTTVGRHLA-ELLGREFLDSDHEI----ERKTGATIPWI--FEKEGE 60 Query: 106 IFSKGFKLIILDEADA 121 + + + ++L+E + Sbjct: 61 VGFRTRETVVLNELTS 76 >1VPL-A nrPDB Length = 256 Score = 30.9 bits (68), Expect = 0.82, Method: Composition-based stats. Identities = 40/240 (16%), Positives = 95/240 (39%), Gaps = 37/240 (15%) Query: 22 ETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAR---------EIYG 72 + L + G+ E++ + ++EG++ L+ GP G GKT+T+ ++ ++G Sbjct: 19 KDLRKRIGKKEILKGISFEIEEGEIFGLI--GPNGAGKTTTLRIISTLIKPSSGIVTVFG 76 Query: 73 KNYSNMVLELNA------------SDDRGIDVVRNQIKDFAST----RQIFSKGFKLIIL 116 KN E+ + +GI+ +R +AS+ ++ + ++ L Sbjct: 77 KNVVEEPHEVRKLISYLPEEAGAYRNMQGIEYLRFVAGFYASSSSEIEEMVERATEIAGL 136 Query: 117 DE--ADAMTNAAQNALRRVI--ERYTKNTRFCVLANYAHKLTPALLSRCTRFRFQPLPQE 172 E D ++ ++ +R+++ N R +L L L +R R + QE Sbjct: 137 GEKIKDRVSTYSKGMVRKLLIARALMVNPRLAILDEPTSGLDV-LNAREVRKILKQASQE 195 Query: 173 AIERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVI 232 + ++ + + + NG + ++ K + +E+ ++V+ Sbjct: 196 G----LTILVSSHNMLEVEFLCDRIALIHNGTIVET-GTVEELKERYKAQNIEEVFEEVV 250 >1D2N-A nrPDB Length = 272 Score = 30.9 bits (68), Expect = 0.86, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 12/79 (15%) Query: 48 HLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIF 107 +L GPP +GKT+ +A E SN S D+ I + ++IF Sbjct: 66 SVLLEGPPHSGKTALAAKIAEE------SNFPFIKICSPDKMIGFSETA--KCQAMKKIF 117 Query: 108 SKGFK----LIILDEADAM 122 +K +++D+ + + Sbjct: 118 DDAYKSQLSCVVVDDIERL 136 >1VIA-A nrPDB Length = 175 Score = 30.6 bits (67), Expect = 0.97, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 28/57 (49%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQ 105 ++F G G+GK++ ALA+++ + L + + ++ + ++F ++ Sbjct: 7 IVFIGFMGSGKSTLARALAKDLDLVFLDSDFLIEQKFNQKVSEIFEQKRENFFREQE 63 >5BK4-5 nrPDB Length = 775 Score = 30.6 bits (67), Expect = 0.98, Method: Composition-based stats. Identities = 40/263 (15%), Positives = 87/263 (33%), Gaps = 32/263 (12%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFS 108 +L G PGT K+ + + + Y++ A + + + + Sbjct: 412 VLLLGDPGTAKSQLLKFVEKVSPIAVYTSGKGSSAAGLTASVQRDPMTREFYLEGGAMVL 471 Query: 109 KGFKLIILDEADAMTNAAQNALRRVIERYTKNTR---FCVLANYAHKLTP---ALLSRCT 162 ++ +DE D M + + A+ +E+ T + + N + + R Sbjct: 472 ADGGVVCIDEFDKMRDEDRVAIHEAMEQQTISIAKAGITTVLNSRTSVLAAANPIYGRYD 531 Query: 163 RFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDNP 222 + P + I + + + E+ I ++N V+N+ + N Sbjct: 532 DLK-SPGDNIDFQTTILSRFDMIFIVKDDHNEERDISIAN----HVINIHTGNANAMQNQ 586 Query: 223 DEDEISDDVIY-----------ECCGAPRPSDLKAVLKSILEDDWGTAHYTL--NKVRSA 269 E+ S+ I +C P + L ++ T L N++ S Sbjct: 587 QEENGSEISIEKMKRYITYCRLKCAPRLSPQAAEK-----LSSNFVTIRKQLLINELEST 641 Query: 270 KGLA---LIDLIEGIVKILEDYE 289 + + I +E I++I E Sbjct: 642 ERSSIPITIRQLEAIIRITESLA 664 >5UJ7-A nrPDB Length = 391 Score = 30.6 bits (67), Expect = 1.0, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 4/67 (5%) Query: 31 NEVITTVRKFVDEGKLPH----LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASD 86 + + FV+ L H + G PGTGKT+T+ + R + +N V + Sbjct: 38 EQEFQDIYNFVESKLLDHTGGCMYISGVPGTGKTATVHEVIRCLQQAAQANDVPPFQYIE 97 Query: 87 DRGIDVV 93 G+ + Sbjct: 98 VNGMKLT 104 >4EUN-A nrPDB Length = 200 Score = 30.6 bits (67), Expect = 1.1, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 3/51 (5%) Query: 46 LPHLLFYGPPGTGKTSTIVALAREI---YGKNYSNMVLELNASDDRGIDVV 93 H++ G G+GKT+ +A E + + + E A+ RGI + Sbjct: 29 TRHVVVMGVSGSGKTTIAHGVADETGLEFAEADAFHSPENIATMQRGIPLT 79 >2CVH-A nrPDB Length = 220 Score = 30.2 bits (66), Expect = 1.2, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 70/209 (33%), Gaps = 41/209 (19%) Query: 34 ITTVRKFVDEGKLPHLL--FYGPPGTGKTSTI--------VALAREIYGKNYSNMVLELN 83 ++ + G P +L YGP +GKT+ +A +S L Sbjct: 6 TKSLDSLLGGGFAPGVLTQVYGPYASGKTTLALQTGLLSGKKVAYVDTEGGFSPERLVQM 65 Query: 84 ASDDRG--------------IDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNAAQN- 128 A RG + Q + S ++ F L+++D A A +N Sbjct: 66 AE-TRGLNPEEALSRFILFTPSDFKEQRRVIGSLKKTVDSNFALVVVDSITAHYRAEENR 124 Query: 129 -----ALRRVIERY----TKNTRFCVLANYAH-----KLTPALLSRCTRFRFQP-LPQEA 173 L R ++ K+ ++ N H ++T + + +R + L + Sbjct: 125 SGLIAELSRQLQVLLWIARKHNIPVIVINQVHFDSRTEMTKPVAEQTLGYRCKDILRLDK 184 Query: 174 IERRIANVLVHEKLKLSPNAEKALIELSN 202 + + V V E+ + P A ++ Sbjct: 185 LPKPGLRVAVLERHRFRPEGLMAYFRITE 213 >6CUM-A nrPDB Length = 315 Score = 30.2 bits (66), Expect = 1.2, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 69/190 (36%), Gaps = 4/190 (2%) Query: 53 GPPGTGKTSTIVALAREIYGKNYSNMVLELNASDD-RGIDVVRNQIKDFASTRQIFSKGF 111 GPPG GK++T+ A+ + VL ++ S G ++ ++I+ A Sbjct: 75 GPPGAGKSTTVGAMVGAYRERGLRVAVLAVDPSSPYSGGALLGDRIRMAAHINDPDVLIR 134 Query: 112 KLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSRCTRFRFQPLPQ 171 + + A A+R + + ++ A ++ T P Sbjct: 135 SMAARGHLGGLAAAVPAAIRLLAALSYDLIVLETVGVGQSEIEIAAIADPTVVILNPGAG 194 Query: 172 EAIERRIANVLVHEKLKLSPNAEKALIELSNGDMRRV--LNVLQSCKATLDNPDEDEISD 229 +A++ A VL L + A++ + + D+R + VL+ A D + I Sbjct: 195 DAVQAAKAGVLEVADLVVVNKADRDGADQTVRDLRAETDVPVLKLVAAQGDGL-HELIEA 253 Query: 230 DVIYECCGAP 239 ++ P Sbjct: 254 IEAHQRADTP 263 >2BDT-A nrPDB Length = 189 Score = 30.2 bits (66), Expect = 1.3, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 43/117 (36%), Gaps = 18/117 (15%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYS--NMVLELNASDDRGI----DVVRNQIKDFAS 102 + GP G GK++T LA ++ Y +++ + R +++ K+ Sbjct: 5 YIITGPAGVGKSTTCKRLAAQLDNSAYIEGDIINHMVVGGYRPPWESDELLALTWKNITD 64 Query: 103 TRQIFSKGFKLIIL------DEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKL 153 F ++L DEA+A+ Q + V RF +L +L Sbjct: 65 LTVNFLLAQNDVVLDYIAFPDEAEALAQTVQAKVDDV------EIRFIILWTNREEL 115 >4CVN-A nrPDB Length = 191 Score = 30.2 bits (66), Expect = 1.5, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGID-VVRNQIKDFASTRQIF 107 + G PG GKT+ LA ++ + + L R +D V +I + A + Sbjct: 14 IAITGTPGVGKTTIAKLLAEKLGYEYVNLRDFALEKGCGREVDGEVEVEIDELAYFVEKE 73 Query: 108 SKGFKLII 115 K +++ Sbjct: 74 LKDRNVVL 81 >4XRP-A nrPDB Length = 312 Score = 29.8 bits (65), Expect = 1.6, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 56/160 (35%), Gaps = 14/160 (8%) Query: 49 LLFYGPPGTGKTSTIVAL--AREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQI 106 L+ G PG+GK++ + + + + + D +I I Sbjct: 14 LILVGAPGSGKSTFARYFIRTEDNWVRVNRDDFRLMQFGDSLMSPFYEERITKMVEASVI 73 Query: 107 -FSKGFKLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSRCTRFR 165 K +I+D ++ + Q+ + E + + L+ RC + Sbjct: 74 ALLKNRTNVIIDATNSSLRSLQDMVHTYTEYADISFKVF------DLPVEELVKRCDKRC 127 Query: 166 FQP---LPQEAIERRIANVL-VHEKLKLSPNAEKALIELS 201 Q +P+ AIE+ + + EK P +AL E S Sbjct: 128 EQTGKFIPKSAIEKHVTQLQYTKEKFDFKP-IPRALKETS 166 >4B3F-X nrPDB Length = 646 Score = 29.8 bits (65), Expect = 1.6, Method: Composition-based stats. Identities = 10/17 (58%), Positives = 15/17 (88%) Query: 50 LFYGPPGTGKTSTIVAL 66 + +GPPGTGKT+T+V + Sbjct: 209 IIHGPPGTGKTTTVVEI 225 >5V7X-A nrPDB Length = 752 Score = 29.8 bits (65), Expect = 1.7, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 30/107 (28%), Gaps = 2/107 (1%) Query: 16 VEKYRPETLDEVYGQNEVI--TTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGK 73 VE YR E+ + R D+ K +L G G GKT + + Sbjct: 69 VEDYRNRNFYELSPHIFALSDEAYRSLRDQDKDQCILITGESGAGKTEASKLVMSYVAAV 128 Query: 74 NYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEAD 120 + V + + R S F + E D Sbjct: 129 CGKGAEVNQVKEQLLQSTPVLEAFGNAKTVRNDNSSRFGKYMDIEFD 175 >2YV5-A nrPDB Length = 302 Score = 29.8 bits (65), Expect = 1.7, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 37/110 (33%), Gaps = 14/110 (12%) Query: 15 WVEKYRPETLDEVY-------GQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALA 67 W+ YR D + G +E++ + F+ + GP G GK+S + L Sbjct: 134 WISIYRDAGYDVLKVSAKTGEGIDELVDYLEGFI-------CILAGPSGVGKSSILSRLT 186 Query: 68 REIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILD 117 E + E G+ ++ F FSK + + Sbjct: 187 GEELRTQEVSEKTERGRHTTTGVRLIPFGKGSFVGDTPGFSKVEATMFVK 236 >3GP8-A nrPDB Length = 574 Score = 29.8 bits (65), Expect = 2.0, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 41/118 (34%), Gaps = 15/118 (12%) Query: 49 LLFYGPPGTGKTSTIVALAREIYG-----------KNYSNMVLELNASDDRGIDVVRNQI 97 ++ G PGTGK++T A+A + + E+ + + Sbjct: 207 VVLTGGPGTGKSTTTKAVADLAESLGLEVGLCAPTGKAARRLGEVTGRTASTVHRLLGYG 266 Query: 98 KDFASTRQIFSKGFKLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTP 155 + + L+I+DE M +A + ++ R ++ + +L P Sbjct: 267 PQGFRHNHLEPAPYDLLIVDEVSMMGDA---LMLSLLAAVPPGARVLLVGD-TDQLPP 320 >4V6G-BF nrPDB Length = 210 Score = 29.4 bits (64), Expect = 2.1, Method: Composition-based stats. Identities = 9/36 (25%), Positives = 18/36 (50%), Gaps = 2/36 (5%) Query: 7 KRSKENLPWVEKYRPETLD--EVYGQNEVITTVRKF 40 +R+ NLPWV PE L+ ++ ++ + + Sbjct: 164 RRAARNLPWVVTLAPEGLNVYDIVRTERLVMDLDAW 199 >5A9K-A nrPDB Length = 305 Score = 29.4 bits (64), Expect = 2.2, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 1/40 (2%) Query: 34 ITTVRKFVD-EGKLPHLLFYGPPGTGKTSTIVALAREIYG 72 I ++ ++ K L F GPP TGK+ +L + G Sbjct: 113 INALKLWLKGIPKKNCLAFIGPPNTGKSMLCNSLIHFLGG 152 >2GXA-A nrPDB Length = 274 Score = 29.4 bits (64), Expect = 2.2, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 1/40 (2%) Query: 34 ITTVRKFVD-EGKLPHLLFYGPPGTGKTSTIVALAREIYG 72 I ++ ++ K L F GPP TGK+ +L + G Sbjct: 110 INALKLWLKGIPKKNCLAFIGPPNTGKSMLCNSLIHFLGG 149 >2IHY-A nrPDB Length = 279 Score = 29.4 bits (64), Expect = 2.3, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 30/77 (38%), Gaps = 2/77 (2%) Query: 24 LDEVYGQNEVITTVRKFV-DEGKLPHLLFYGPPGTGKTSTIVAL-AREIYGKNYSNMVLE 81 LD++ + T ++K K + YG G GKT+ + L A E N+ + Sbjct: 24 LDQIGRMKQGKTILKKISWQIAKGDKWILYGLNGAGKTTLLNILNAYEPATSGTVNLFGK 83 Query: 82 LNASDDRGIDVVRNQIK 98 + + VR I Sbjct: 84 MPGKVGYSAETVRQHIG 100 >5X5Y-B nrPDB Length = 247 Score = 29.4 bits (64), Expect = 2.3, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 2/88 (2%) Query: 22 ETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLE 81 + L + Y +V+ V +D G++ LL GP G GKT+ + + + E Sbjct: 7 QHLAKSYKGRQVVRDVSMSIDSGQIVGLL--GPNGAGKTTCFYMIVGLVQADQGVVRIDE 64 Query: 82 LNASDDRGIDVVRNQIKDFASTRQIFSK 109 N + R I IF K Sbjct: 65 QNVTHLPMHGRARAGIGYLPQEASIFRK 92 >3H1T-A nrPDB Length = 590 Score = 29.4 bits (64), Expect = 2.3, Method: Composition-based stats. Identities = 15/72 (20%), Positives = 29/72 (40%), Gaps = 10/72 (13%) Query: 78 MVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNAAQNALRRVIERY 137 + + ASD+R + + +DF F LII+DE + + R ++E + Sbjct: 280 AIYQSIASDERRPGLYKEFPQDF----------FDLIIIDECHRGSARDNSNWREILEYF 329 Query: 138 TKNTRFCVLANY 149 + + A Sbjct: 330 EPAFQIGMTATP 341 >3SR0-A nrPDB Length = 206 Score = 29.4 bits (64), Expect = 2.4, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 14/21 (66%) Query: 49 LLFYGPPGTGKTSTIVALARE 69 L+F GPPG GK + LA+E Sbjct: 3 LVFLGPPGAGKGTQAKRLAKE 23 >3CM0-A nrPDB Length = 186 Score = 29.4 bits (64), Expect = 2.6, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 15/23 (65%) Query: 48 HLLFYGPPGTGKTSTIVALAREI 70 ++F GPPG GK + LA+E+ Sbjct: 6 AVIFLGPPGAGKGTQASRLAQEL 28 >4LV5-B nrPDB Length = 423 Score = 29.0 bits (63), Expect = 2.7, Method: Composition-based stats. Identities = 43/262 (16%), Positives = 90/262 (34%), Gaps = 26/262 (9%) Query: 42 DEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNA-----SDDRGIDVVRNQ 96 +P+++F+ PG G T+ E + + ++A +D + Sbjct: 125 KHPNIPNVVFWDLPGIGSTNFPPNTYLEKMKFYEYDFFIIISATRFKKNDIDIAKAISMM 184 Query: 97 IKDFASTRQIFSKGFKLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPA 156 K+F R I +EAD +V++ N N + Sbjct: 185 KKEFYFVRTKVDSD----ITNEAD--GKPQTFDKEKVLQDIRLNCVNTFRENGIAEPPIF 238 Query: 157 LLSRCTRFRF-QPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSC 215 LLS + P+ + + + H + PN ++IE +++ + + Sbjct: 239 LLSNKNVCHYDFPVLMDKLISDLPIYKRHNFMVSLPNITDSVIEKKRQFLKQRIWL---- 294 Query: 216 KATLDNPDEDEISDDVIYECCGAPRPSDLKAVLKSIL--EDDWGTAHYTLNKVRSAKGLA 273 D I + + SDL+ + KS+ +G +L + + Sbjct: 295 --EGFAADLVNIIPSLTFLLD-----SDLETLKKSMKFYRTVFGVDETSLQR-LARDWEI 346 Query: 274 LIDLIEGIVKILEDYELQNEET 295 +D +E ++K ++ +EET Sbjct: 347 EVDQVEAMIKSPAVFKPTDEET 368 >3KN1-A nrPDB Length = 249 Score = 29.0 bits (63), Expect = 2.9, Method: Composition-based stats. Identities = 19/122 (15%), Positives = 43/122 (35%), Gaps = 9/122 (7%) Query: 193 AEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYECCGAPRPSDLKAVLKSIL 252 A + ++L MRR + + D P D + D+ + P ++ ++ + Sbjct: 49 ALRGRLQLEACGMRRKSLLTRKVICKSDAPTGDVLLDEALKHVKETQPPETVQNWIELLS 108 Query: 253 EDDWG---------TAHYTLNKVRSAKGLALIDLIEGIVKILEDYELQNEETRVHLLTKL 303 + W L K KG+ + ++ + + L N + L+ K+ Sbjct: 109 GETWNPLKLHYQLRNVRERLAKNLVEKGVLTTEKQNFLLFDMTTHPLTNNNIKQRLIKKV 168 Query: 304 AD 305 + Sbjct: 169 QE 170 >1YE8-A nrPDB Length = 178 Score = 29.0 bits (63), Expect = 3.0, Method: Composition-based stats. Identities = 23/172 (13%), Positives = 50/172 (29%), Gaps = 39/172 (22%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFAST----- 103 ++ G PG GKT+ + + + + E+ + + R + Sbjct: 3 IIITGEPGVGKTTLVKKIVERLGKRAIGFWTEEVRDPETKKRTGFRIITTEGKKKIFSSK 62 Query: 104 ------------------------------RQIFSKGFKLIILDEADAM---TNAAQNAL 130 R+ K+II+DE M + ++ + Sbjct: 63 FFTSKKLVGSYGVNVQYFEELAIPILERAYREAKKDRRKVIIIDEIGKMELFSKKFRDLV 122 Query: 131 RRVIERYTKNTRFCVLANYAHKLTPALLSRCTRFRFQPLPQEAIERRIANVL 182 R+++ N + H L + R L E + + ++L Sbjct: 123 RQIMHDPNVNVVATIPIRDVHPLVKEIR-RLPGAVLIELTPENRDVILEDIL 173 >3A4L-A nrPDB Length = 260 Score = 29.0 bits (63), Expect = 3.1, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 8/76 (10%) Query: 44 GKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFAST 103 G + ++ G PG GK++ LA+ + N +VL G D++R + Sbjct: 2 GDIMLIILTGLPGVGKSTFSKNLAKILSKNNIDVIVL--------GSDLIRESFPVWKEK 53 Query: 104 RQIFSKGFKLIILDEA 119 + F K ++D A Sbjct: 54 YEEFIKKSTYRLIDSA 69 >5LKM-A nrPDB Length = 452 Score = 28.6 bits (62), Expect = 3.5, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 28/65 (43%), Gaps = 7/65 (10%) Query: 17 EKYRPETLDEVYG-----QNEVITTVRKFVDEGKLPH--LLFYGPPGTGKTSTIVALARE 69 EK +P L EV + + + G +P +L G PG GK++ ++ ++ + Sbjct: 52 EKTKPMKLAEVTSINVNRTKTEMEEFNRVLGGGVVPGSLVLIGGDPGIGKSTLLLQVSTQ 111 Query: 70 IYGKN 74 + Sbjct: 112 LSQVG 116 >6H3Z-A nrPDB Length = 226 Score = 28.6 bits (62), Expect = 3.6, Method: Composition-based stats. Identities = 9/87 (10%), Positives = 35/87 (40%), Gaps = 2/87 (2%) Query: 228 SDDVIYECCGAPRPSDLKAVLKSILEDDWGTAHYTLNKVRSAKGLALIDLIEGIVKILED 287 + + + L+ + N++ A++D+I+ +++++ Sbjct: 16 RPTGLNQIDSRAVAERINKYLEQLTAAATSATEEHFNELPRPH--AVLDIIDALIQLIIK 73 Query: 288 YELQNEETRVHLLTKLADIEYSISKGG 314 + +EE ++ L +++ + + +G Sbjct: 74 AQQTSEEFAIYALQQISQLLFRQPEGT 100 >6GEJ-U nrPDB Length = 471 Score = 28.6 bits (62), Expect = 3.6, Method: Composition-based stats. Identities = 8/24 (33%), Positives = 15/24 (62%) Query: 47 PHLLFYGPPGTGKTSTIVALAREI 70 +L GPP TGKT+ + +++ + Sbjct: 69 RAVLVAGPPSTGKTALAMGVSQSL 92 >6CS8-A nrPDB Length = 303 Score = 28.6 bits (62), Expect = 3.7, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 2/75 (2%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQ--IKDFASTRQI 106 +L G G GKT+TI LAR+ + S M+ + ++ ++ + Q Sbjct: 102 ILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQH 161 Query: 107 FSKGFKLIILDEADA 121 +I D A Sbjct: 162 TGADSASVIFDAIQA 176 >4A0L-E nrPDB Length = 726 Score = 28.6 bits (62), Expect = 4.0, Method: Composition-based stats. Identities = 17/150 (11%), Positives = 51/150 (34%), Gaps = 14/150 (9%) Query: 116 LDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSRCTRFRFQPLPQEAIE 175 L+E T LRR ++ + N K +F + + Sbjct: 577 LEEIKQATGIEDGELRRTLQSLACGKARVLAKNPKGKDIED----GDKFIC----NDDFK 628 Query: 176 RRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATL----DNPDEDEISDDV 231 ++ + +++ +++ E+ + + + + + + + +V Sbjct: 629 HKLFRIKINQ-IQMKETVEEQ-ASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEV 686 Query: 232 IYECCGAPRPSDLKAVLKSILEDDWGTAHY 261 + +P+DLK ++S+++ D+ Sbjct: 687 YNQLKFPVKPADLKKRIESLIDRDYMERDK 716 >4E22-A nrPDB Length = 252 Score = 28.6 bits (62), Expect = 4.2, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 16/44 (36%) Query: 28 YGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIY 71 G E + + P + GP G GK + ALA + Sbjct: 9 LGSPEFPGRLERPHMTAIAPVITVDGPSGAGKGTLCKALAESLN 52 >1P4S-A nrPDB Length = 181 Score = 28.2 bits (61), Expect = 4.6, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 16/34 (47%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLEL 82 +L GPPG GK + V LA ++ S L Sbjct: 3 VLLLGPPGAGKGTQAVKLAEKLGIPQISTGELFR 36 >1IHU-A nrPDB Length = 589 Score = 28.2 bits (61), Expect = 4.8, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 3/55 (5%) Query: 25 DEVYGQNEVITTVRKFVDE-GKLPH--LLFYGPPGTGKTSTIVALAREIYGKNYS 76 DE Q I ++ VD+ + H ++ G G GKT+ A+A + + Sbjct: 303 DEYLQQRPDIPSLSALVDDIARNEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFD 357 >5GAD-l nrPDB Length = 497 Score = 27.9 bits (60), Expect = 6.1, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 2/75 (2%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQ--IKDFASTRQI 106 +L G G GKT+TI LAR+ + S M+ + ++ ++ + Q Sbjct: 296 ILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQH 355 Query: 107 FSKGFKLIILDEADA 121 +I D A Sbjct: 356 TGADSASVIFDAIQA 370 >3JVU-A nrPDB Length = 356 Score = 27.9 bits (60), Expect = 7.5, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 31/80 (38%), Gaps = 9/80 (11%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNY---------SNMVLELNASDDRGIDVVRNQIKD 99 +L GP G+GK++T+ A+ + Y V E +V R+ + Sbjct: 126 VLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVHRDTLGF 185 Query: 100 FASTRQIFSKGFKLIILDEA 119 + R + +I++ E Sbjct: 186 SEALRSALREDPDIILVGEM 205 >3TLX-A nrPDB Length = 243 Score = 27.5 bits (59), Expect = 8.1, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 58/137 (42%), Gaps = 8/137 (5%) Query: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFS 108 +F G PG+GK + + L + + S L A++ + + +IK+ + ++ Sbjct: 32 YIFLGAPGSGKGTQSLNLKKSHCYCHLSTGDLLREAAEKK--TELGLKIKNIINEGKLVD 89 Query: 109 KGFKLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSRCTRFRFQP 168 L ++DE Q +++ Y +N + A +KL ++ + Sbjct: 90 DQMVLSLVDE---KLKTPQCKKGFILDGYPRNVK---QAEDLNKLLQKNQTKLDGVFYFN 143 Query: 169 LPQEAIERRIANVLVHE 185 +P E + RI+ L+H+ Sbjct: 144 VPDEVLVNRISGRLIHK 160 >4KSS-A nrPDB Length = 581 Score = 27.5 bits (59), Expect = 8.2, Method: Composition-based stats. Identities = 50/294 (17%), Positives = 97/294 (32%), Gaps = 29/294 (9%) Query: 39 KFVDEGKLPH--LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNAS-DDRGIDVVR- 94 F K PH +L GP G+GK++T+ A +E+ + + +E D GI + Sbjct: 150 NFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQV 209 Query: 95 NQIKDFAST---RQIFSKGFKLIILDEADAMTNAA---QNALRRVIERYTKNTRFCVLAN 148 N D R I + ++++ E + A Q +L + T +T V A Sbjct: 210 NPRVDMTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTNTAVGAV 269 Query: 149 --------YAHKLTPALLSRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIEL 200 ++ +LL + R + KL S E ++ Sbjct: 270 TRLRDMGIEPFLISSSLLGVLAQ-RLVRTLCPDCKEPYEADKEQRKLFDSKKKEPLILYR 328 Query: 201 SNG---------DMRRVLNVLQSCKATLDNPDEDEISDDVIYECCGAPRPSDLKAVLKSI 251 + G R ++ L L E + + + A PS L + Sbjct: 329 ATGCPKCNHKGYRGRTGIHELLLVDDALQELIHSEAGEQAMEKHIRATTPSIRDDGLDKV 388 Query: 252 LEDDWGTAHYTLNKVRSAKGLALIDLIEGIVKILEDYELQNEETRVHLLTKLAD 305 + + + + + + ++ +KI + ++T + LA Sbjct: 389 RQG-ITSLEEVMRVTKESGSGSGSGAVDMFIKIGDVKGESKDKTHAEEIDVLAW 441 >3EU4-A nrPDB Length = 202 Score = 27.5 bits (59), Expect = 8.6, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 23/65 (35%) Query: 239 PRPSDLKAVLKSILEDDWGTAHYTLNKVRSAKGLALIDLIEGIVKILEDYELQNEETRVH 298 +P LK L LN+ + + I + + ++K DY+ E Sbjct: 131 IKPETLKENLDKETFASQVEKDSDLNQKMNIQATPTIYVNDKVIKNFADYDEIKETIEKE 190 Query: 299 LLTKL 303 L KL Sbjct: 191 LKGKL 195 >4A0K-A nrPDB Length = 742 Score = 27.5 bits (59), Expect = 9.4, Method: Composition-based stats. Identities = 16/155 (10%), Positives = 53/155 (34%), Gaps = 22/155 (14%) Query: 116 LDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSR----CTRFRFQPLPQ 171 +E T + LRR ++ + A L + + +F F Sbjct: 593 FEEIKMATGIEDSELRRTLQS--------LACGKARVLIKSPKGKEVEDGDKFIF----N 640 Query: 172 EAIERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATL----DNPDEDEI 227 + ++ + +++ +++ E+ + + + + + + + + Sbjct: 641 GEFKHKLFRIKINQ-IQMKETVEEQVS-TTERVFQDRQYQIDAAIVRIMKMRKTLGHNLL 698 Query: 228 SDDVIYECCGAPRPSDLKAVLKSILEDDWGTAHYT 262 ++ + +P DLK ++S+++ D+ Sbjct: 699 VSELYNQLKFPVKPGDLKKRIESLIDRDYMERDKD 733 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.308 0.121 0.280 Lambda K H 0.267 0.0372 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,736,802 Number of Sequences: 36641 Number of extensions: 346155 Number of successful extensions: 2254 Number of sequences better than 10.0: 239 Number of HSP's better than 10.0 without gapping: 262 Number of HSP's successfully gapped in prelim test: 134 Number of HSP's that attempted gapping in prelim test: 1693 Number of HSP's gapped (non-prelim): 457 length of query: 340 length of database: 10,336,785 effective HSP length: 98 effective length of query: 242 effective length of database: 6,745,967 effective search space: 1632524014 effective search space used: 1632524014 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 59 (27.5 bits)