BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P38319 (544 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1Q32-A nrPDB 1143 0.0 3SQ8-A nrPDB 969 0.0 1RG1-A nrPDB 83 4e-16 3IVU-A nrPDB 36 0.044 >1Q32-A nrPDB Length = 544 Score = 1143 bits (2957), Expect = 0.0, Method: Compositional matrix adjust. Identities = 544/544 (100%), Positives = 544/544 (100%) Query: 1 MSRETNFNGTKRKRSDVAEKVAQRWKSVRYSAEMENMAPVNSNNDSDDCVIVSESKIIDL 60 MSRETNFNGTKRKRSDVAEKVAQRWKSVRYSAEMENMAPVNSNNDSDDCVIVSESKIIDL Sbjct: 1 MSRETNFNGTKRKRSDVAEKVAQRWKSVRYSAEMENMAPVNSNNDSDDCVIVSESKIIDL 60 Query: 61 TNQEQDLSERIETNDTAKGAVFKLMKSDFYEREDFMGEVEDMITLKDIFGTETLKRSILF 120 TNQEQDLSERIETNDTAKGAVFKLMKSDFYEREDFMGEVEDMITLKDIFGTETLKRSILF Sbjct: 61 TNQEQDLSERIETNDTAKGAVFKLMKSDFYEREDFMGEVEDMITLKDIFGTETLKRSILF 120 Query: 121 SFQYELDFLLRQFHQNVENITIVGQKGTIMPIEARAMDATLAVILKKVKLIEITMPPFAS 180 SFQYELDFLLRQFHQNVENITIVGQKGTIMPIEARAMDATLAVILKKVKLIEITMPPFAS Sbjct: 121 SFQYELDFLLRQFHQNVENITIVGQKGTIMPIEARAMDATLAVILKKVKLIEITMPPFAS 180 Query: 181 HHTKLIINFYDNGECKIFLPSNNFTSMETNLPQQVCWCSPLLKIGKEGLPVPFKRSLIEY 240 HHTKLIINFYDNGECKIFLPSNNFTSMETNLPQQVCWCSPLLKIGKEGLPVPFKRSLIEY Sbjct: 181 HHTKLIINFYDNGECKIFLPSNNFTSMETNLPQQVCWCSPLLKIGKEGLPVPFKRSLIEY 240 Query: 241 LNSYHLKDIDELITKSVEEVNFAPLSELEFVYSTPSKFQSSGLLSFYNKLEKLSAGTSAS 300 LNSYHLKDIDELITKSVEEVNFAPLSELEFVYSTPSKFQSSGLLSFYNKLEKLSAGTSAS Sbjct: 241 LNSYHLKDIDELITKSVEEVNFAPLSELEFVYSTPSKFQSSGLLSFYNKLEKLSAGTSAS 300 Query: 301 DTAKHYLCQTSSIGTSLSRARDENLWTHLMIPLFTGIMSPPAKDTAGRKKAEILPTNSLI 360 DTAKHYLCQTSSIGTSLSRARDENLWTHLMIPLFTGIMSPPAKDTAGRKKAEILPTNSLI Sbjct: 301 DTAKHYLCQTSSIGTSLSRARDENLWTHLMIPLFTGIMSPPAKDTAGRKKAEILPTNSLI 360 Query: 361 NEYSQRKIKPYIIFPTEQEFVTSPLKWSSSGWFHFQYLQKKSYYEMLRNKFKVFYKQDPA 420 NEYSQRKIKPYIIFPTEQEFVTSPLKWSSSGWFHFQYLQKKSYYEMLRNKFKVFYKQDPA Sbjct: 361 NEYSQRKIKPYIIFPTEQEFVTSPLKWSSSGWFHFQYLQKKSYYEMLRNKFKVFYKQDPA 420 Query: 421 MVTRRRGTTPAHSKFYMHCATNSAGPCDASQVFKELEWCLYTSANLSQTAWGTVSRKPRN 480 MVTRRRGTTPAHSKFYMHCATNSAGPCDASQVFKELEWCLYTSANLSQTAWGTVSRKPRN Sbjct: 421 MVTRRRGTTPAHSKFYMHCATNSAGPCDASQVFKELEWCLYTSANLSQTAWGTVSRKPRN 480 Query: 481 YEAGVLYHSRRLANTRKVTCRTFTRDRRGCAGNPTHVAVPFTLPVIPYDLAEDECFCLAR 540 YEAGVLYHSRRLANTRKVTCRTFTRDRRGCAGNPTHVAVPFTLPVIPYDLAEDECFCLAR Sbjct: 481 YEAGVLYHSRRLANTRKVTCRTFTRDRRGCAGNPTHVAVPFTLPVIPYDLAEDECFCLAR 540 Query: 541 HEND 544 HEND Sbjct: 541 HEND 544 >3SQ8-A nrPDB Length = 470 Score = 969 bits (2506), Expect = 0.0, Method: Compositional matrix adjust. Identities = 461/465 (99%), Positives = 462/465 (99%) Query: 79 GAVFKLMKSDFYEREDFMGEVEDMITLKDIFGTETLKRSILFSFQYELDFLLRQFHQNVE 138 GAVFKLMKSDFYEREDFMGEVEDMITLKDIFGTETLKRSILFSFQYELDFLLRQFHQNVE Sbjct: 2 GAVFKLMKSDFYEREDFMGEVEDMITLKDIFGTETLKRSILFSFQYELDFLLRQFHQNVE 61 Query: 139 NITIVGQKGTIMPIEARAMDATLAVILKKVKLIEITMPPFASHHTKLIINFYDNGECKIF 198 NITIVGQKGTIMPIEARAMDATLAVILKKVKLIEITMPPFASHHTKLIINFYDNGECKIF Sbjct: 62 NITIVGQKGTIMPIEARAMDATLAVILKKVKLIEITMPPFASHHTKLIINFYDNGECKIF 121 Query: 199 LPSNNFTSMETNLPQQVCWCSPLLKIGKEGLPVPFKRSLIEYLNSYHLKDIDELITKSVE 258 LPSNNFTSMETNLPQQVCWCSPLLKIGKEGLPVPFKRSLIEYLNSYHLKDIDELITKSVE Sbjct: 122 LPSNNFTSMETNLPQQVCWCSPLLKIGKEGLPVPFKRSLIEYLNSYHLKDIDELITKSVE 181 Query: 259 EVNFAPLSELEFVYSTPSKFQSSGLLSFYNKLEKLSAGTSASDTAKHYLCQTSSIGTSLS 318 EVNFAPLSELEFVYSTPSKFQSSGLLSFYNKLEKLSAGTSASDTAKHYLCQTSSIGTSLS Sbjct: 182 EVNFAPLSELEFVYSTPSKFQSSGLLSFYNKLEKLSAGTSASDTAKHYLCQTSSIGTSLS 241 Query: 319 RARDENLWTHLMIPLFTGIMSPPAKDTAGRKKAEILPTNSLINEYSQRKIKPYIIFPTEQ 378 RARDENLWTHLMIPLFTGIMSPPAKDTAGRKKAEILPTNSLINEYSQRKIKPYIIFPTEQ Sbjct: 242 RARDENLWTHLMIPLFTGIMSPPAKDTAGRKKAEILPTNSLINEYSQRKIKPYIIFPTEQ 301 Query: 379 EFVTSPLKWSSSGWFHFQYLQKKSYYEMLRNKFKVFYKQDPAMVTRRRGTTPAHSKFYMH 438 EFVTSPLKWSSSGWFHFQYLQKKSYYEMLRNKFKVFYKQDPAMVTRRRGTTPA SKFYMH Sbjct: 302 EFVTSPLKWSSSGWFHFQYLQKKSYYEMLRNKFKVFYKQDPAMVTRRRGTTPARSKFYMH 361 Query: 439 CATNSAGPCDASQVFKELEWCLYTSANLSQTAWGTVSRKPRNYEAGVLYHSRRLANTRKV 498 CATNSAGPCDASQVFKELEWCLYTSANLSQTAWGTVSRKPRNYEAGVLYHSRRLANTRKV Sbjct: 362 CATNSAGPCDASQVFKELEWCLYTSANLSQTAWGTVSRKPRNYEAGVLYHSRRLANTRKV 421 Query: 499 TCRTFTRDRRGCAGNPTHVAVPFTLPVIPYDLAEDECFCLARHEN 543 TCRTFTRDRRGCAGNPTHVAVPFTLPVIPYDLAEDECFCLA H + Sbjct: 422 TCRTFTRDRRGCAGNPTHVAVPFTLPVIPYDLAEDECFCLALHHH 466 >1RG1-A nrPDB Length = 485 Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 108/439 (24%), Positives = 187/439 (42%), Gaps = 69/439 (15%) Query: 105 LKDIFGTETLKRSILFSFQYELDFLLRQFHQNVENITIVGQKGTIMPIEARAMDATLAVI 164 L +FGT L S F++ +++D+L++Q+ I+ G EA+A A Sbjct: 66 LSPLFGT--LVSSAQFNYCFDVDWLVKQYPPEFRKKPILLVHGDKR--EAKAHLHAQAKP 121 Query: 165 LKKVKLIEITMP-PFASHHTKLIINFYDNGECKIFLPSNNFTSMETNLPQQVCWCSPLLK 223 + + L + + F +HHTK+++ Y+ G ++ + ++N + + Q W SPL Sbjct: 122 YENISLCQAKLDIAFGTHHTKMMLLLYEEG-LRVVIHTSNLIHADWHQKTQGIWLSPLYP 180 Query: 224 IGKEGL------PVPFKRSLIEYLNSYHLKDIDELITKSVEEVNFAPLSE--LEFVYSTP 275 +G P FK +LI YL +Y+ + E I + ++ LSE + + STP Sbjct: 181 RIADGTHKSGESPTHFKANLISYLTAYNAPSLKEWI----DVIHKHDLSETNVYLIGSTP 236 Query: 276 SKFQSSGLLSF----YNKLEKLSAGTSASDTAKHYLCQTSSIGTSLSRARDENLWTHLMI 331 +FQ S ++ KL K A + + + + Q SS+G S DE+ W + Sbjct: 237 GRFQGSQKDNWGHFRLKKLLKDHASSMPNAESWPVVGQFSSVG---SLGADESKW---LC 290 Query: 332 PLFTGIMSPPAKDTAGRKKAEILPTNSLINEYSQRKIKPYIIFPTEQEFVTSPLKWSSSG 391 F M K++ K+ + Y+I+P+ + TS + + G Sbjct: 291 SEFKESMLTLGKESKTPGKSSV---------------PLYLIYPSVENVRTSLEGYPAGG 335 Query: 392 WFHFQYLQKKSYYEMLRNKFKVFYKQDPAMVTRRRGTTPAHSKFYMHCATNSAGPCDASQ 451 + + +N ++ + A + R P H K YM + + Sbjct: 336 SLPYSIQTAEK-----QNWLHSYFHKWSAETSGRSNAMP-HIKTYMRPSPD--------- 380 Query: 452 VFKELEWCLYTSANLSQTAWGTVSRKP-----RNYEAGVLYHSRRLA-NTRKVTCRTFTR 505 F ++ W L TSANLS+ AWG + + R+YE GVL+ L ++ KV + F Sbjct: 381 -FSKIAWFLVTSANLSKAAWGALEKNGTQLMIRSYELGVLFLPSALGLDSFKVKQKFFAG 439 Query: 506 DRRGCAGNPTHVAVPFTLP 524 + A P VP+ LP Sbjct: 440 SQEPMATFP----VPYDLP 454 >3IVU-A nrPDB Length = 423 Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust. Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 9/103 (8%) Query: 195 CKIFLPSNNFTSMETNLPQQVCWCSPLLKIGKEGLPVPFKRSLIEYLNSY-HLKDIDELI 253 CK+ L T + ++ ++ G +G+ V S +YL Y H KD+ +I Sbjct: 97 CKLGLKCKILTHIRCHMDD----ARVAVETGVDGVDVVIGTS--QYLRKYSHGKDMTYII 150 Query: 254 TKSVEEVNFAPLSELEFVYSTPSKFQSS--GLLSFYNKLEKLS 294 + E +NF +E +S+ F+S LLS Y ++K+ Sbjct: 151 DSATEVINFVKSKGIEVRFSSEDSFRSDLVDLLSLYKAVDKIG 193 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1Q32-A nrPDB 1013 0.0 3SQ8-A nrPDB 849 0.0 1RG1-A nrPDB 538 e-153 Sequences not found previously or not previously below threshold: 2Z0S-A nrPDB 34 0.14 1ZWX-A nrPDB 33 0.26 5L7O-C nrPDB 33 0.33 5N9J-E nrPDB 32 0.48 6HOZ-A nrPDB 32 0.71 5DMQ-A nrPDB 32 0.76 1SEQ-L nrPDB 29 3.9 CONVERGED! >1Q32-A nrPDB Length = 544 Score = 1013 bits (2620), Expect = 0.0, Method: Composition-based stats. Identities = 544/544 (100%), Positives = 544/544 (100%) Query: 1 MSRETNFNGTKRKRSDVAEKVAQRWKSVRYSAEMENMAPVNSNNDSDDCVIVSESKIIDL 60 MSRETNFNGTKRKRSDVAEKVAQRWKSVRYSAEMENMAPVNSNNDSDDCVIVSESKIIDL Sbjct: 1 MSRETNFNGTKRKRSDVAEKVAQRWKSVRYSAEMENMAPVNSNNDSDDCVIVSESKIIDL 60 Query: 61 TNQEQDLSERIETNDTAKGAVFKLMKSDFYEREDFMGEVEDMITLKDIFGTETLKRSILF 120 TNQEQDLSERIETNDTAKGAVFKLMKSDFYEREDFMGEVEDMITLKDIFGTETLKRSILF Sbjct: 61 TNQEQDLSERIETNDTAKGAVFKLMKSDFYEREDFMGEVEDMITLKDIFGTETLKRSILF 120 Query: 121 SFQYELDFLLRQFHQNVENITIVGQKGTIMPIEARAMDATLAVILKKVKLIEITMPPFAS 180 SFQYELDFLLRQFHQNVENITIVGQKGTIMPIEARAMDATLAVILKKVKLIEITMPPFAS Sbjct: 121 SFQYELDFLLRQFHQNVENITIVGQKGTIMPIEARAMDATLAVILKKVKLIEITMPPFAS 180 Query: 181 HHTKLIINFYDNGECKIFLPSNNFTSMETNLPQQVCWCSPLLKIGKEGLPVPFKRSLIEY 240 HHTKLIINFYDNGECKIFLPSNNFTSMETNLPQQVCWCSPLLKIGKEGLPVPFKRSLIEY Sbjct: 181 HHTKLIINFYDNGECKIFLPSNNFTSMETNLPQQVCWCSPLLKIGKEGLPVPFKRSLIEY 240 Query: 241 LNSYHLKDIDELITKSVEEVNFAPLSELEFVYSTPSKFQSSGLLSFYNKLEKLSAGTSAS 300 LNSYHLKDIDELITKSVEEVNFAPLSELEFVYSTPSKFQSSGLLSFYNKLEKLSAGTSAS Sbjct: 241 LNSYHLKDIDELITKSVEEVNFAPLSELEFVYSTPSKFQSSGLLSFYNKLEKLSAGTSAS 300 Query: 301 DTAKHYLCQTSSIGTSLSRARDENLWTHLMIPLFTGIMSPPAKDTAGRKKAEILPTNSLI 360 DTAKHYLCQTSSIGTSLSRARDENLWTHLMIPLFTGIMSPPAKDTAGRKKAEILPTNSLI Sbjct: 301 DTAKHYLCQTSSIGTSLSRARDENLWTHLMIPLFTGIMSPPAKDTAGRKKAEILPTNSLI 360 Query: 361 NEYSQRKIKPYIIFPTEQEFVTSPLKWSSSGWFHFQYLQKKSYYEMLRNKFKVFYKQDPA 420 NEYSQRKIKPYIIFPTEQEFVTSPLKWSSSGWFHFQYLQKKSYYEMLRNKFKVFYKQDPA Sbjct: 361 NEYSQRKIKPYIIFPTEQEFVTSPLKWSSSGWFHFQYLQKKSYYEMLRNKFKVFYKQDPA 420 Query: 421 MVTRRRGTTPAHSKFYMHCATNSAGPCDASQVFKELEWCLYTSANLSQTAWGTVSRKPRN 480 MVTRRRGTTPAHSKFYMHCATNSAGPCDASQVFKELEWCLYTSANLSQTAWGTVSRKPRN Sbjct: 421 MVTRRRGTTPAHSKFYMHCATNSAGPCDASQVFKELEWCLYTSANLSQTAWGTVSRKPRN 480 Query: 481 YEAGVLYHSRRLANTRKVTCRTFTRDRRGCAGNPTHVAVPFTLPVIPYDLAEDECFCLAR 540 YEAGVLYHSRRLANTRKVTCRTFTRDRRGCAGNPTHVAVPFTLPVIPYDLAEDECFCLAR Sbjct: 481 YEAGVLYHSRRLANTRKVTCRTFTRDRRGCAGNPTHVAVPFTLPVIPYDLAEDECFCLAR 540 Query: 541 HEND 544 HEND Sbjct: 541 HEND 544 >3SQ8-A nrPDB Length = 470 Score = 849 bits (2194), Expect = 0.0, Method: Composition-based stats. Identities = 461/465 (99%), Positives = 462/465 (99%) Query: 79 GAVFKLMKSDFYEREDFMGEVEDMITLKDIFGTETLKRSILFSFQYELDFLLRQFHQNVE 138 GAVFKLMKSDFYEREDFMGEVEDMITLKDIFGTETLKRSILFSFQYELDFLLRQFHQNVE Sbjct: 2 GAVFKLMKSDFYEREDFMGEVEDMITLKDIFGTETLKRSILFSFQYELDFLLRQFHQNVE 61 Query: 139 NITIVGQKGTIMPIEARAMDATLAVILKKVKLIEITMPPFASHHTKLIINFYDNGECKIF 198 NITIVGQKGTIMPIEARAMDATLAVILKKVKLIEITMPPFASHHTKLIINFYDNGECKIF Sbjct: 62 NITIVGQKGTIMPIEARAMDATLAVILKKVKLIEITMPPFASHHTKLIINFYDNGECKIF 121 Query: 199 LPSNNFTSMETNLPQQVCWCSPLLKIGKEGLPVPFKRSLIEYLNSYHLKDIDELITKSVE 258 LPSNNFTSMETNLPQQVCWCSPLLKIGKEGLPVPFKRSLIEYLNSYHLKDIDELITKSVE Sbjct: 122 LPSNNFTSMETNLPQQVCWCSPLLKIGKEGLPVPFKRSLIEYLNSYHLKDIDELITKSVE 181 Query: 259 EVNFAPLSELEFVYSTPSKFQSSGLLSFYNKLEKLSAGTSASDTAKHYLCQTSSIGTSLS 318 EVNFAPLSELEFVYSTPSKFQSSGLLSFYNKLEKLSAGTSASDTAKHYLCQTSSIGTSLS Sbjct: 182 EVNFAPLSELEFVYSTPSKFQSSGLLSFYNKLEKLSAGTSASDTAKHYLCQTSSIGTSLS 241 Query: 319 RARDENLWTHLMIPLFTGIMSPPAKDTAGRKKAEILPTNSLINEYSQRKIKPYIIFPTEQ 378 RARDENLWTHLMIPLFTGIMSPPAKDTAGRKKAEILPTNSLINEYSQRKIKPYIIFPTEQ Sbjct: 242 RARDENLWTHLMIPLFTGIMSPPAKDTAGRKKAEILPTNSLINEYSQRKIKPYIIFPTEQ 301 Query: 379 EFVTSPLKWSSSGWFHFQYLQKKSYYEMLRNKFKVFYKQDPAMVTRRRGTTPAHSKFYMH 438 EFVTSPLKWSSSGWFHFQYLQKKSYYEMLRNKFKVFYKQDPAMVTRRRGTTPA SKFYMH Sbjct: 302 EFVTSPLKWSSSGWFHFQYLQKKSYYEMLRNKFKVFYKQDPAMVTRRRGTTPARSKFYMH 361 Query: 439 CATNSAGPCDASQVFKELEWCLYTSANLSQTAWGTVSRKPRNYEAGVLYHSRRLANTRKV 498 CATNSAGPCDASQVFKELEWCLYTSANLSQTAWGTVSRKPRNYEAGVLYHSRRLANTRKV Sbjct: 362 CATNSAGPCDASQVFKELEWCLYTSANLSQTAWGTVSRKPRNYEAGVLYHSRRLANTRKV 421 Query: 499 TCRTFTRDRRGCAGNPTHVAVPFTLPVIPYDLAEDECFCLARHEN 543 TCRTFTRDRRGCAGNPTHVAVPFTLPVIPYDLAEDECFCLA H + Sbjct: 422 TCRTFTRDRRGCAGNPTHVAVPFTLPVIPYDLAEDECFCLALHHH 466 >1RG1-A nrPDB Length = 485 Score = 538 bits (1385), Expect = e-153, Method: Composition-based stats. Identities = 108/439 (24%), Positives = 187/439 (42%), Gaps = 69/439 (15%) Query: 105 LKDIFGTETLKRSILFSFQYELDFLLRQFHQNVENITIVGQKGTIMPIEARAMDATLAVI 164 L +FGT L S F++ +++D+L++Q+ I+ G EA+A A Sbjct: 66 LSPLFGT--LVSSAQFNYCFDVDWLVKQYPPEFRKKPILLVHGDKR--EAKAHLHAQAKP 121 Query: 165 LKKVKLIEITMP-PFASHHTKLIINFYDNGECKIFLPSNNFTSMETNLPQQVCWCSPLLK 223 + + L + + F +HHTK+++ Y+ G ++ + ++N + + Q W SPL Sbjct: 122 YENISLCQAKLDIAFGTHHTKMMLLLYEEG-LRVVIHTSNLIHADWHQKTQGIWLSPLYP 180 Query: 224 IGKEGL------PVPFKRSLIEYLNSYHLKDIDELITKSVEEVNFAPLSE--LEFVYSTP 275 +G P FK +LI YL +Y+ + E I + ++ LSE + + STP Sbjct: 181 RIADGTHKSGESPTHFKANLISYLTAYNAPSLKEWI----DVIHKHDLSETNVYLIGSTP 236 Query: 276 SKFQSSGLLSF----YNKLEKLSAGTSASDTAKHYLCQTSSIGTSLSRARDENLWTHLMI 331 +FQ S ++ KL K A + + + + Q SS+G S DE+ W + Sbjct: 237 GRFQGSQKDNWGHFRLKKLLKDHASSMPNAESWPVVGQFSSVG---SLGADESKW---LC 290 Query: 332 PLFTGIMSPPAKDTAGRKKAEILPTNSLINEYSQRKIKPYIIFPTEQEFVTSPLKWSSSG 391 F M K++ K+ + Y+I+P+ + TS + + G Sbjct: 291 SEFKESMLTLGKESKTPGKSSV---------------PLYLIYPSVENVRTSLEGYPAGG 335 Query: 392 WFHFQYLQKKSYYEMLRNKFKVFYKQDPAMVTRRRGTTPAHSKFYMHCATNSAGPCDASQ 451 + + +N ++ + A + R P H K YM + + Sbjct: 336 SLPYSIQTAEK-----QNWLHSYFHKWSAETSGRSNAMP-HIKTYMRPSPD--------- 380 Query: 452 VFKELEWCLYTSANLSQTAWGTVSRKP-----RNYEAGVLYHSRRLA-NTRKVTCRTFTR 505 F ++ W L TSANLS+ AWG + + R+YE GVL+ L ++ KV + F Sbjct: 381 -FSKIAWFLVTSANLSKAAWGALEKNGTQLMIRSYELGVLFLPSALGLDSFKVKQKFFAG 439 Query: 506 DRRGCAGNPTHVAVPFTLP 524 + A P VP+ LP Sbjct: 440 SQEPMATFP----VPYDLP 454 >2Z0S-A nrPDB Length = 235 Score = 34.4 bits (77), Expect = 0.14, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 39/95 (41%), Gaps = 13/95 (13%) Query: 127 DFLLRQFHQNVENITIVGQKGTIMPIEARAMDATLAVIL-------------KKVKLIEI 173 DFL R F+ V+++ + + G + + A D T + +L K V++ Sbjct: 98 DFLGRPFNPAVDDMQSLLKVGDYIKAKVVAFDKTRSPLLTVQGEGLGRIVRGKIVEISPA 157 Query: 174 TMPPFASHHTKLIINFYDNGECKIFLPSNNFTSME 208 +P ++ + ECKIF+ N +E Sbjct: 158 KVPRVIGRKMSMLKTLEEKTECKIFVARNGRIHLE 192 >1ZWX-A nrPDB Length = 301 Score = 33.2 bits (74), Expect = 0.26, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 6/63 (9%) Query: 356 TNSLINEYSQRKIKPYIIFPTEQEFVTSPLKWSSSGWFHFQYLQKKSYYEMLRNKFKVFY 415 TNS++ E + Y+ + + P W H + L KS +++ FK + Sbjct: 231 TNSMLKESYPKAAPEYLDYIFVENGHARPHSW------HNKVLHTKSPQWSVKSWFKTYT 284 Query: 416 KQD 418 QD Sbjct: 285 YQD 287 >5L7O-C nrPDB Length = 285 Score = 33.2 bits (74), Expect = 0.33, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 44/108 (40%), Gaps = 8/108 (7%) Query: 141 TIVGQKGTIMPIEARAMDATLAVILKKVKLIEITMPPFASHHTKLIINFYDNGECKIFLP 200 TIV Q+ + A +D L + LK + + P + ++ + + KI Sbjct: 10 TIVVQRPSQYFNNADGVDQGLPLSLKYGNEVILKTPFAGTSSDEMALEY----VLKIPNY 65 Query: 201 SNNFTSMETNLPQQVCWCSPLLKIGKEG----LPVPFKRSLIEYLNSY 244 + F T+LP+QV W SP+ + P + +L+ Y + Sbjct: 66 FSRFKYSSTSLPKQVLWTSPVHPQIIRNHVTVVDAPGQPTLLAYATGF 113 >5N9J-E nrPDB Length = 376 Score = 32.5 bits (72), Expect = 0.48, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 74/161 (45%), Gaps = 10/161 (6%) Query: 35 ENMAPVNSNNDSDDCVI-VSESKIIDLTNQEQD--LSERIETNDTAKGAVFKLMKSDFYE 91 ++ A +N+SD + V E L +E+D + E +++ DT + + + + Sbjct: 148 QHTAMKEKDNESDKTMKDVEEKTEPSLKKEEEDIQMKEPLDSQDTGAVSASSVNEGFRAD 207 Query: 92 REDFMGEVEDMITL-KDIFGTETLKRSILFSFQYELDFLLR---QFHQNVENITIVGQKG 147 ++ GE D+I + + + L RS++ +F L + + QF VENI ++ Sbjct: 208 QKSKDGETSDLIKIPRRAYELRFLSRSLMLNFLELLGIMAKAPEQFPSKVENIRVLLLNL 267 Query: 148 TIMPIEARAMDATLAVIL---KKVKLIEITMPPFASHHTKL 185 + + R + ++I+ K++K E + +H+ ++ Sbjct: 268 HHLINDYRPHQSRESLIMLLEKQLKHEESQVELLRTHNRQM 308 >6HOZ-A nrPDB Length = 350 Score = 32.1 bits (71), Expect = 0.71, Method: Composition-based stats. Identities = 28/153 (18%), Positives = 57/153 (37%), Gaps = 21/153 (13%) Query: 330 MIPLFTGIMSPPAKDTAGRKKAEILPTNSLINEYSQRKIKPYIIFPTEQEFV-------- 381 ++ +F ++SP D + + S N + R + +P Q+ + Sbjct: 100 VVQVFKKLLSPKYSDVFQPAREQFDGKGSYGNGGAMRVASIALAYPNIQDVIKFARRSAQ 159 Query: 382 ---TSPLKWSSSGWFHFQYLQKKSYYEMLRNKFK--VFYKQDPAMVTRRRGTTPAHSKFY 436 SPL ++ + LQ + + L+ + K F +Q + R G + S Sbjct: 160 LTHASPLGYNGA------ILQALAVHFALQGELKRDTFLEQLIGEMERIEGGEMSASDAG 213 Query: 437 MHCATNSAGPCDASQVFKELEWCLYTSANLSQT 469 H N S+ K+++ L S+N+ + Sbjct: 214 EHDRPNEVKLPFCSR-LKKIKEFL-ASSNVPKA 244 >5DMQ-A nrPDB Length = 648 Score = 31.7 bits (70), Expect = 0.76, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 49/118 (41%), Gaps = 10/118 (8%) Query: 175 MPPFASHHTKLIINFYDNGECKIFLPSNN-FTSMETNLPQQVC-----WCSPLLKIGKEG 228 +PP SH +++ D C P++ + E P+ W L G + Sbjct: 116 LPP--SHQWYTVLDLKDAFFCLRLHPTSQPLFAFEWRDPEMGISGQLTWTR--LPQGFKN 171 Query: 229 LPVPFKRSLIEYLNSYHLKDIDELITKSVEEVNFAPLSELEFVYSTPSKFQSSGLLSF 286 P F +L L + ++ D ++ + V+++ A SEL+ T + Q+ G L + Sbjct: 172 SPTLFDEALHRDLADFRIQHPDLILLQYVDDLLLAATSELDCQQGTRALLQTLGNLGY 229 >1SEQ-L nrPDB Length = 213 Score = 29.4 bits (64), Expect = 3.9, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 39/101 (38%), Gaps = 12/101 (11%) Query: 261 NFAPLSELEFVYST-------PSKFQSSGLLSFYNKLEKLSAGTSASDTAKHYLCQTSSI 313 + S + +Y+T PS+F SG +FY+ + ASD A +Y Q SS Sbjct: 37 QKSGTSPVLLIYTTSNLASGVPSRFSGSGSGTFYSLTI---SSVEASDAADYYCHQWSSY 93 Query: 314 GTSLSRARDENLWTHLMIPLFTGIMSPPAKDTAGRKKAEIL 354 + + P T + PP+ + A ++ Sbjct: 94 PWTFGGGTKLEIKRADAAP--TVSIFPPSSEQLTSGGASVV 132 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.308 0.124 0.344 Lambda K H 0.267 0.0382 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,765,545 Number of Sequences: 36641 Number of extensions: 737417 Number of successful extensions: 1728 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 9 Number of HSP's that attempted gapping in prelim test: 1707 Number of HSP's gapped (non-prelim): 16 length of query: 544 length of database: 10,336,785 effective HSP length: 102 effective length of query: 442 effective length of database: 6,599,403 effective search space: 2916936126 effective search space used: 2916936126 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 61 (28.2 bits)