BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P38251 (354 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1SXJ-E nrPDB 720 0.0 1IQP-A nrPDB 119 2e-27 2CHG-A nrPDB 117 7e-27 2CHV-A nrPDB 117 9e-27 1SXJ-D nrPDB 116 1e-26 1SXJ-C nrPDB 103 1e-22 1SXJ-B nrPDB 93 2e-19 3U5Z-B nrPDB 52 5e-07 3GLF-B nrPDB 42 3e-04 1NJG-A nrPDB 42 4e-04 3PXI-A nrPDB 40 0.002 6EM8-A nrPDB 37 0.014 3J3U-A nrPDB 37 0.017 6EMW-B nrPDB 35 0.036 5OFO-C nrPDB 33 0.22 1HQC-A nrPDB 33 0.22 4CIU-A nrPDB 33 0.23 5ZFQ-A nrPDB 32 0.58 3JVU-A nrPDB 32 0.59 5U1D-A nrPDB 31 0.65 1JJ7-A nrPDB 31 0.91 6FGZ-A nrPDB 30 1.4 2IXE-A nrPDB 30 1.7 2IUS-A nrPDB 30 2.1 6M99-B nrPDB 30 2.1 5XIG-A nrPDB 30 2.1 5D4W-A nrPDB 30 2.1 5VQ9-D nrPDB 29 2.8 4E22-A nrPDB 29 3.0 2JNX-A nrPDB 28 4.3 2IUT-A nrPDB 28 5.4 2IUU-A nrPDB 28 6.0 5ZCD-A nrPDB 28 6.9 5CUX-A nrPDB 28 8.8 >1SXJ-E nrPDB Length = 354 Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust. Identities = 353/354 (99%), Positives = 354/354 (100%) Query: 1 MSLWVDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESI 60 MSLWVDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESI Sbjct: 1 MSLWVDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESI 60 Query: 61 FGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQME 120 FGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQME Sbjct: 61 FGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQME 120 Query: 121 QVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAP 180 QVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAP Sbjct: 121 QVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAP 180 Query: 181 IKSRCLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESM 240 IKS+CLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESM Sbjct: 181 IKSQCLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESM 240 Query: 241 ALNNELALKSSSPIIKPDWIIVIHKLTRKIVKERSVNSLIECRAVLYDLLAHCIPANIIL 300 ALNNELALKSSSPIIKPDWIIVIHKLTRKIVKERSVNSLIECRAVLYDLLAHCIPANIIL Sbjct: 241 ALNNELALKSSSPIIKPDWIIVIHKLTRKIVKERSVNSLIECRAVLYDLLAHCIPANIIL 300 Query: 301 KELTFSLLDVETLNTTNKSSIIEYSSVFDERLSLGNKAIFHLEGFIAKVMCCLD 354 KELTFSLLDVETLNTTNKSSIIEYSSVFDERLSLGNKAIFHLEGFIAKVMCCLD Sbjct: 301 KELTFSLLDVETLNTTNKSSIIEYSSVFDERLSLGNKAIFHLEGFIAKVMCCLD 354 >1IQP-A nrPDB Length = 327 Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 79/238 (33%), Positives = 124/238 (52%), Gaps = 36/238 (15%) Query: 4 WVDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGP 63 WV+KYRP+ L+ + E + LK + +PHLL GP G GK T +AL +FG Sbjct: 15 WVEKYRPQRLDDIVGQEHIVKRLKHYV-KTGSMPHLLFAGPPGVGKTTAALALARELFGE 73 Query: 64 GVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVD 123 +R LELN + G N VI+E +KE A+ + + Sbjct: 74 N-WRHNF------------LELN----------ASDERGIN---VIREKVKEFARTKPIG 107 Query: 124 FQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKS 183 +K + ++EA++LT+DAQ ALRRTME +S N+R I+ C+ S II PI+S Sbjct: 108 --------GASFKIIFLDEADALTQDAQQALRRTMEMFSSNVRFILSCNYSSKIIEPIQS 159 Query: 184 RCLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESMA 241 RC + R D +I+ L + NE ++L T++ L+ I + G++R ++ +L++ A Sbjct: 160 RCAIFRFRPLRDEDIAKRLRYIAENEGLEL-TEEGLQAILYIAEGDMRRAINILQAAA 216 >2CHG-A nrPDB Length = 226 Score = 117 bits (293), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 38/247 (15%) Query: 1 MSLWVDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESI 60 +WV+KYRP++L+ + +E+ LK ++ +++PHLL GP GTGK +AL + Sbjct: 4 FEIWVEKYRPRTLDEVVGQDEVIQRLKGYVER-KNIPHLLFSGPPGTGKTATAIALARDL 62 Query: 61 FGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQME 120 FG N + +E+ SD D V++ +KE A+ Sbjct: 63 FG----------------ENWRDNF--------IEMNASDERGID--VVRHKIKEFARTA 96 Query: 121 QVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAP 180 + +K + ++EA++LT DAQAALRRTME YSK+ R I+ C+ +S II P Sbjct: 97 PIG--------GAPFKIIFLDEADALTADAQAALRRTMEMYSKSCRFILSCNYVSRIIEP 148 Query: 181 IKSRCLLIRC-PAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLES 239 I+SRC + R P P ++ +L ++ E +++ T+D L+ + S G+ R ++ L+ Sbjct: 149 IQSRCAVFRFKPVPKEAMKKRLL-EICEKEGVKI-TEDGLEALIYISGGDFRKAINALQG 206 Query: 240 MALNNEL 246 A E+ Sbjct: 207 AAAIGEV 213 >2CHV-A nrPDB Length = 319 Score = 117 bits (292), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 95/354 (26%), Positives = 170/354 (48%), Gaps = 53/354 (14%) Query: 1 MSLWVDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESI 60 +WV+KYRP++L+ + +E+ LK ++ +++PHLL GP GTGK +AL + Sbjct: 4 FEIWVEKYRPRTLDEVVGQDEVIQRLKGYVER-KNIPHLLFSGPPGTGKTATAIALARDL 62 Query: 61 FGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQME 120 FG +R +E+ SD D V++ +KE A+ Sbjct: 63 FGEN-WR-----------------------DNFIEMNASDERGID--VVRHKIKEFARTA 96 Query: 121 QVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAP 180 + +K + ++EA++LT DAQAALRRTME YSK+ R I+ C+ +S II P Sbjct: 97 PIG--------GAPFKIIFLDEADALTADAQAALRRTMEMYSKSCRFILSCNYVSRIIEP 148 Query: 181 IKSRCLLIRC-PAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLES 239 I+SRC + R P P ++ +L ++ E +++ T+D L+ + S G+ R ++ L+ Sbjct: 149 IQSRCAVFRFKPVPKEAMKKRLL-EICEKEGVKI-TEDGLEALIYISGGDFRKAINALQG 206 Query: 240 MALNNELALKSSSPIIKPDWIIVIHKLTR-----KIVKERSVNSLIECRAVLYDLLA-HC 293 A E ++ D I I R ++++ + +E R +L L+ + Sbjct: 207 AAAIGE--------VVDADTIYQITATARPEEMTELIQTALKGNFMEARELLDRLMVEYG 258 Query: 294 IPANIILKELTFSLLDVETLNTTNKSSIIEYSSVFDERLSLGNKAIFHLEGFIA 347 + I+ +L ++ + + + K +I+ D RL+ G L+ ++A Sbjct: 259 MSGEDIVAQLFREIISM-PIKDSLKVQLIDKLGEVDFRLTEGANERIQLDAYLA 311 >1SXJ-D nrPDB Length = 353 Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 93/349 (26%), Positives = 164/349 (46%), Gaps = 28/349 (8%) Query: 4 WVDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGP 63 WV+KYRPK+L+ ++ + LK + + +LPH+L YGP GTGK + +AL + ++GP Sbjct: 27 WVEKYRPKNLDEVTAQDHAVTVLKK-TLKSANLPHMLFYGPPGTGKTSTILALTKELYGP 85 Query: 64 GVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVD 123 + + +I LELN S + I + N R+ + + K Sbjct: 86 DLMKSRI------------LELNA-SDERGISIVREKVKNFARLTVSKPSK--------- 123 Query: 124 FQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKS 183 D ++ YK +I++EA+S+T DAQ+ALRRTME YS R ++C+ ++ II P+ S Sbjct: 124 -HDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLAS 182 Query: 184 RCLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESMALN 243 +C R A S L + E ++ + +L+RI S G+LR + +L+S + Sbjct: 183 QCSKFRFKALDASNAIDRLRFISEQENVKCD-DGVLERILDISAGDLRRGITLLQSASKG 241 Query: 244 NEL---ALKSSSPIIKPDWIIVIHKLTRKIVKERSVNSLIECRAVLYDLLAHCIPANIIL 300 + +S ++ +V H + +IV++ E + + + A ++ Sbjct: 242 AQYLGDGKNITSTQVEELAGVVPHDILIEIVEKVKSGDFDEIKKYVNTFMKSGWSAASVV 301 Query: 301 KELTFSLLDVETLNTTNKSSIIEYSSVFDERLSLGNKAIFHLEGFIAKV 349 +L + + +T K+ I D RL+ G L + K+ Sbjct: 302 NQLHEYYITNDNFDTNFKNQISWLLFTTDSRLNNGTNEHIQLLNLLVKI 350 >1SXJ-C nrPDB Length = 340 Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 69/237 (29%), Positives = 125/237 (52%), Gaps = 38/237 (16%) Query: 4 WVDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGP 63 WV+KYRP++L+ + E+ ++ D+ + LPHLL YGP GTGK + +AL I+G Sbjct: 15 WVEKYRPETLDEVYGQNEVITTVRKFVDEGK-LPHLLFYGPPGTGKTSTIVALAREIYGK 73 Query: 64 GVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVD 123 SN LELN ++DR + +V + + D Sbjct: 74 NY-------------SNMVLELN---------------ASDDRGI------DVVRNQIKD 99 Query: 124 FQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKS 183 F ++ + +K +I++EA+++T AQ ALRR +E+Y+KN R ++ + + + S Sbjct: 100 FASTRQIFSKGFKLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLS 159 Query: 184 RCLLIRC-PAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLES 239 +C R P P ++ I +++V+ +E+++L + + K + + SNG++R L +L+S Sbjct: 160 QCTRFRFQPLPQEA-IERRIANVLVHEKLKL-SPNAEKALIELSNGDMRRVLNVLQS 214 >1SXJ-B nrPDB Length = 323 Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 69/243 (28%), Positives = 120/243 (49%), Gaps = 35/243 (14%) Query: 4 WVDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGP 63 WV+KYRP+ L+ + N+E + L+ ++ + ++PH+++ G G GK T L + G Sbjct: 11 WVEKYRPQVLSDIVGNKETIDRLQQIA-KDGNMPHMIISGMPGIGKTTSVHCLAHELLG- 68 Query: 64 GVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVD 123 R + LE+ SD D V++ +K AQ +++ Sbjct: 69 ---------RSYADGV--------------LELNASDDRGID--VVRNQIKHFAQ-KKLH 102 Query: 124 FQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKS 183 K +K VI++EA+S+T AQ ALRRTME YS + R C+ + II P++S Sbjct: 103 LPPGK------HKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQS 156 Query: 184 RCLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESMALN 243 +C ++R SD ++ L ++ E ++ T D L+ I + G++R ++ L+S Sbjct: 157 QCAILRYSKLSDEDVLKRLLQIIKLEDVKY-TNDGLEAIIFTAEGDMRQAINNLQSTVAG 215 Query: 244 NEL 246 + L Sbjct: 216 HGL 218 >3U5Z-B nrPDB Length = 324 Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 76/333 (22%), Positives = 133/333 (39%), Gaps = 88/333 (26%) Query: 7 KYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPN-GTGKKTRCMALLESIFGPGV 65 KYRP +++ KS++ + + +PH++L+ P+ GTGK T AL + Sbjct: 19 KYRPSTIDECILPAFDKETFKSITSKGK-IPHIILHSPSPGTGKTTVAKALCHDV----- 72 Query: 66 YRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQ 125 D+ FV S+ K++ V P L A D Sbjct: 73 ---NADM-MFVNGSDCKIDF--VRGP---------------------LTNFASAASFD-- 103 Query: 126 DSKDGLAHRYKCVIINEAN-SLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKSR 184 R K ++I+E + S ++Q LR ME YS N +I+ +++ II P++SR Sbjct: 104 -------GRQKVIVIDEFDRSGLAESQRHLRSFMEAYSSNCSIIITANNIDGIIKPLQSR 156 Query: 185 CLLIRCPAPSDSEISTI-------LSDVVTNERIQLET------------KDILKRIAQ- 224 C +I P+D + + L+++ +E I + D K I + Sbjct: 157 CRVITFGQPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGEL 216 Query: 225 ---ASNGNLRVSLL------------MLESMALNNELALKSSSPIIKPDWIIVIHKLTRK 269 +S G L +L +LES+ + L++ +P D+ + KL + Sbjct: 217 DSYSSKGVLDAGILSLVTNDRGAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEE 276 Query: 270 IVKERSVNSLIECRAVLYDLLA-----HCIPAN 297 I + S+I +Y+++ H I AN Sbjct: 277 IYSRVTPQSIIR----MYEIVGENNQYHGIAAN 305 >3GLF-B nrPDB Length = 395 Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 27/101 (26%), Positives = 54/101 (53%), Gaps = 1/101 (0%) Query: 134 RYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKSRCLLIRCPAP 193 R+K +I+E + L++ + AL +T+E+ ++++ ++ + I SRCL A Sbjct: 141 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL 200 Query: 194 SDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSL 234 +I L ++ E I E + L+ +A+A+ G+LR +L Sbjct: 201 DVEQIRHQLEHILNEEHIAHEPR-ALQLLARAAEGSLRDAL 240 >1NJG-A nrPDB Length = 250 Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 27/101 (26%), Positives = 54/101 (53%), Gaps = 1/101 (0%) Query: 134 RYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKSRCLLIRCPAP 193 R+K +I+E + L++ + AL +T+E+ ++++ ++ + I SRCL A Sbjct: 126 RFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL 185 Query: 194 SDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSL 234 +I L ++ E I E + L+ +A+A+ G+LR +L Sbjct: 186 DVEQIRHQLEHILNEEHIAHEPR-ALQLLARAAEGSLRDAL 225 >3PXI-A nrPDB Length = 758 Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 3/68 (4%) Query: 28 SLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFV---TASNRKLE 84 L D R + + GP G GK AL ESIFG ++ID+ +++ + S +L Sbjct: 513 GLKDPKRPIGSFIFLGPTGVGKTELARALAESIFGDEESMIRIDMSEYMEKHSTSGGQLT 572 Query: 85 LNVVSSPY 92 V PY Sbjct: 573 EKVRRKPY 580 >6EM8-A nrPDB Length = 818 Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust. Identities = 16/49 (32%), Positives = 25/49 (51%) Query: 28 SLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFV 76 L D R + + GP G GK AL ES+FG +++D+ +F+ Sbjct: 530 GLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDDAMIRVDMSEFM 578 >3J3U-A nrPDB Length = 810 Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust. Identities = 17/49 (34%), Positives = 25/49 (51%) Query: 28 SLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFV 76 L D R + + GP G GK AL ESIFG ++ID+ +++ Sbjct: 530 GLKDPKRPIGSFIFLGPTGVGKTELARALAESIFGDEESMIRIDMSEYM 578 >6EMW-B nrPDB Length = 225 Score = 35.4 bits (80), Expect = 0.036, Method: Compositional matrix adjust. Identities = 16/49 (32%), Positives = 25/49 (51%) Query: 28 SLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFV 76 L D R + + GP G GK AL ES+FG +++D+ +F+ Sbjct: 43 GLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDDAMIRVDMSEFM 91 >5OFO-C nrPDB Length = 871 Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust. Identities = 16/49 (32%), Positives = 24/49 (48%) Query: 28 SLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFV 76 L+D R + L GP G GK C AL +F ++ID+ +F+ Sbjct: 594 GLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFM 642 >1HQC-A nrPDB Length = 324 Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 4/47 (8%) Query: 9 RPKSLNALSHNEELTN----FLKSLSDQPRDLPHLLLYGPNGTGKKT 51 RPK+L+ E L +L++ + L HLLL+GP G GK T Sbjct: 7 RPKTLDEYIGQERLKQKLRVYLEAAKARKEPLEHLLLFGPPGLGKTT 53 >4CIU-A nrPDB Length = 727 Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust. Identities = 16/49 (32%), Positives = 24/49 (48%) Query: 28 SLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFV 76 L+D R + L GP G GK C AL +F ++ID+ +F+ Sbjct: 448 GLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFM 496 >5ZFQ-A nrPDB Length = 390 Score = 31.6 bits (70), Expect = 0.58, Method: Compositional matrix adjust. Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 2/35 (5%) Query: 26 LKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESI 60 +K L+++PR L +L+ GP G+GK T A+++ I Sbjct: 141 VKELAEKPRGL--ILVTGPTGSGKSTTLAAIIDKI 173 >3JVU-A nrPDB Length = 356 Score = 31.6 bits (70), Expect = 0.59, Method: Compositional matrix adjust. Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%) Query: 22 LTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLE 58 + K +SD PR L +L+ GP G+GK T A+L+ Sbjct: 111 MGEVFKRVSDVPRGL--VLVTGPTGSGKSTTLAAMLD 145 >5U1D-A nrPDB Length = 748 Score = 31.2 bits (69), Expect = 0.65, Method: Compositional matrix adjust. Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 6/95 (6%) Query: 41 LYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSD 100 L GPNG+GK T ALL++++ P +L +D + +R L V + + P Sbjct: 536 LVGPNGSGKST-VAALLQNLYQPTGGQLLLDGKPLPQYEHRYLHRQVAA----VGQEPQV 590 Query: 101 MGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRY 135 G + + I L + ME++ K G AH + Sbjct: 591 FGRSLQENIAYGLTQKPTMEEITAAAVKSG-AHSF 624 >1JJ7-A nrPDB Length = 260 Score = 30.8 bits (68), Expect = 0.91, Method: Compositional matrix adjust. Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 6/95 (6%) Query: 41 LYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSD 100 L GPNG+GK T ALL++++ P +L +D + +R L V + + P Sbjct: 48 LVGPNGSGKST-VAALLQNLYQPTGGQLLLDGKPLPQYEHRYLHRQVAA----VGQEPQV 102 Query: 101 MGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRY 135 G + + I L + ME++ K G AH + Sbjct: 103 FGRSLQENIAYGLTQKPTMEEITAAAVKSG-AHSF 136 >6FGZ-A nrPDB Length = 774 Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 7/74 (9%) Query: 25 FLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALL-ESIFGPG---VYRLKIDVRQFVTASN 80 F ++ D P DLP +++ G +GK + ++ ESIF G V R I V+ + TA Sbjct: 15 FAETGLDSPIDLPQIMVVGAQSSGKSSVLENVVGESIFPRGTGIVTRRPIVVQLYCTARE 74 Query: 81 RKLELNVVSSPYHL 94 R LN +P ++ Sbjct: 75 R---LNQSGAPDNM 85 >2IXE-A nrPDB Length = 271 Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust. Identities = 29/121 (23%), Positives = 47/121 (38%), Gaps = 12/121 (9%) Query: 41 LYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSD 100 L GPNG+GK T ALL++++ P ++ +D V + L V + + P Sbjct: 50 LVGPNGSGKST-VAALLQNLYQPTGGKVLLDGEPLVQYDHHYLHTQVAA----VGQEPLL 104 Query: 101 MGNNDRIVIQELLKEVAQMEQV-------DFQDSKDGLAHRYKCVIINEANSLTKDAQAA 153 G + R I L ME++ D G Y + N L+ + A Sbjct: 105 FGRSFRENIAYGLTRTPTMEEITAVAMESGAHDFISGFPQGYDTEVGETGNQLSGGQRQA 164 Query: 154 L 154 + Sbjct: 165 V 165 >2IUS-A nrPDB Length = 512 Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust. Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 4/59 (6%) Query: 36 LPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHL 94 +PHLL+ G G+G A++ S+ Y+ + + +F+ + LEL+V HL Sbjct: 167 MPHLLVAGTTGSGASVGVNAMILSML----YKAQPEDVRFIMIDPKMLELSVYEGIPHL 221 >6M99-B nrPDB Length = 728 Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust. Identities = 13/42 (30%), Positives = 25/42 (59%) Query: 150 AQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKSRCLLIRCP 191 A LRR ++++S ++ + ++ I P+K+RCLL+ P Sbjct: 41 APGWLRRQLDEFSASLTASELLQALQTIPIPVKARCLLLPKP 82 >5XIG-A nrPDB Length = 500 Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust. Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 7/114 (6%) Query: 67 RLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQD 126 R++ID R T + V P LE+ P D+ V++ E Q+ D Sbjct: 322 RVRIDDRSNYTPGWKYNHWEVKGVPLRLELGPKDLAKGTARVVRRDTGEAYQISWAD--- 378 Query: 127 SKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAP 180 LA + ++ SL + A+A L +EK S ++ + ++AP Sbjct: 379 ----LAPKLLELMEGIQRSLFEKAKARLHEGIEKISTFDEVMPALNRKHLVLAP 428 >5D4W-A nrPDB Length = 926 Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust. Identities = 14/43 (32%), Positives = 21/43 (48%) Query: 33 PRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQF 75 P P L GP+GTGK AL E +F ++ D+ ++ Sbjct: 624 PNQPPSFLFCGPSGTGKTLLTKALAEFLFDDPKSMIRFDMSEY 666 >5VQ9-D nrPDB Length = 432 Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust. Identities = 11/22 (50%), Positives = 16/22 (72%) Query: 39 LLLYGPNGTGKKTRCMALLESI 60 +LL+GP GTGK + C AL + + Sbjct: 175 VLLHGPPGTGKTSLCKALAQKL 196 >4E22-A nrPDB Length = 252 Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust. Identities = 12/24 (50%), Positives = 16/24 (66%) Query: 37 PHLLLYGPNGTGKKTRCMALLESI 60 P + + GP+G GK T C AL ES+ Sbjct: 28 PVITVDGPSGAGKGTLCKALAESL 51 >2JNX-A nrPDB Length = 134 Score = 28.5 bits (62), Expect = 4.3, Method: Compositional matrix adjust. Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 1/74 (1%) Query: 100 DMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTME 159 D+ N I + E K A +++ D D K GL YK + + LTK+ + Sbjct: 46 DIDGNGEIDLAEFTKFAAAVKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKF- 104 Query: 160 KYSKNIRLIMVCDS 173 Y K + IM D+ Sbjct: 105 GYEKVVDQIMKADA 118 >2IUT-A nrPDB Length = 574 Score = 28.1 bits (61), Expect = 5.4, Method: Compositional matrix adjust. Identities = 12/26 (46%), Positives = 16/26 (61%) Query: 36 LPHLLLYGPNGTGKKTRCMALLESIF 61 +PHLL+ G G+GK A+L SI Sbjct: 214 MPHLLVAGTTGSGKSVGVNAMLLSIL 239 >2IUU-A nrPDB Length = 491 Score = 28.1 bits (61), Expect = 6.0, Method: Compositional matrix adjust. Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 4/59 (6%) Query: 36 LPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHL 94 +PHLL+ G G+GK A+L SI ++ + + + LEL++ HL Sbjct: 214 MPHLLVAGTTGSGKSVGVNAMLLSIL----FKSTPSEARLIMIDPKMLELSIYEGIPHL 268 >5ZCD-A nrPDB Length = 555 Score = 27.7 bits (60), Expect = 6.9, Method: Compositional matrix adjust. Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 11/61 (18%) Query: 90 SPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKD 149 +P L+ PS G+ +R IQE LKE+ K+ +Y + + +AN +T D Sbjct: 215 NPEKLDYVPSFEGHMNRPGIQEHLKEL-----------KEKTFAKYDIMTVGQANGVTSD 263 Query: 150 A 150 + Sbjct: 264 S 264 >5CUX-A nrPDB Length = 263 Score = 27.7 bits (60), Expect = 8.8, Method: Compositional matrix adjust. Identities = 11/25 (44%), Positives = 16/25 (64%) Query: 16 LSHNEELTNFLKSLSDQPRDLPHLL 40 +SHN+ + FLK + D P+ LP L Sbjct: 189 ISHNDPICRFLKDIHDVPKFLPGCL 213 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1SXJ-E nrPDB 467 e-132 1SXJ-D nrPDB 373 e-104 2CHV-A nrPDB 354 4e-98 1IQP-A nrPDB 294 3e-80 2CHG-A nrPDB 279 2e-75 1SXJ-B nrPDB 246 1e-65 1SXJ-C nrPDB 237 5e-63 3U5Z-B nrPDB 223 1e-58 3GLF-B nrPDB 158 3e-39 1NJG-A nrPDB 153 9e-38 Sequences not found previously or not previously below threshold: 1SXJ-A nrPDB 86 3e-17 3PVS-A nrPDB 70 1e-12 1HQC-A nrPDB 66 3e-11 4D81-A nrPDB 52 5e-07 2XSZ-D nrPDB 51 7e-07 1IN6-A nrPDB 48 7e-06 4LGM-A nrPDB 48 7e-06 2XSZ-A nrPDB 47 2e-05 6EMW-B nrPDB 44 9e-05 4LCB-A nrPDB 43 3e-04 6B5C-A nrPDB 43 3e-04 6EM8-A nrPDB 43 3e-04 6QI9-D nrPDB 42 4e-04 5WC0-A nrPDB 42 4e-04 6B5D-A nrPDB 42 5e-04 1XXI-E nrPDB 42 5e-04 6AP1-A nrPDB 41 6e-04 5VHP-C nrPDB 41 6e-04 3K1J-A nrPDB 41 6e-04 5M32-h nrPDB 41 6e-04 5EQT-A nrPDB 41 8e-04 4YPL-A nrPDB 41 8e-04 5GJQ-J nrPDB 41 8e-04 3JCO-J nrPDB 41 9e-04 3EIH-A nrPDB 41 9e-04 2I3B-A nrPDB 41 0.001 4CIU-A nrPDB 41 0.001 5XMK-A nrPDB 41 0.001 5VHN-D nrPDB 40 0.002 3J3U-A nrPDB 40 0.002 4YPN-A nrPDB 39 0.002 6QEL-G nrPDB 39 0.002 4ZPX-A nrPDB 39 0.002 5VQ9-D nrPDB 39 0.002 5T0C-AD nrPDB 39 0.003 3PFI-A nrPDB 39 0.003 6EF2-J nrPDB 39 0.003 6EF1-K nrPDB 39 0.004 6NYV-B nrPDB 39 0.004 5D4W-A nrPDB 39 0.004 3M6A-A nrPDB 38 0.005 6CHS-H nrPDB 38 0.006 5ZQM-A nrPDB 38 0.006 5OFO-C nrPDB 38 0.006 6BLB-A nrPDB 38 0.007 5WVI-K nrPDB 38 0.007 3WHK-A nrPDB 38 0.008 5UBV-A nrPDB 38 0.009 3PXI-A nrPDB 37 0.011 2QBY-A nrPDB 37 0.012 3D8B-A nrPDB 37 0.012 5U1D-A nrPDB 37 0.015 1JJ7-A nrPDB 37 0.015 1XWI-A nrPDB 37 0.015 3H4M-A nrPDB 37 0.017 6MSK-B nrPDB 36 0.019 2ZAO-A nrPDB 36 0.019 5VHO-B nrPDB 36 0.020 5VHF-B nrPDB 36 0.021 5VFP-B nrPDB 36 0.024 4XGC-A nrPDB 36 0.029 5Z6Q-A nrPDB 36 0.030 6HE4-H nrPDB 36 0.030 6GEJ-U nrPDB 36 0.037 2R44-A nrPDB 35 0.039 6HE9-H nrPDB 35 0.039 4LJ8-A nrPDB 35 0.039 6AZ0-A nrPDB 35 0.047 2CE7-A nrPDB 35 0.049 5V8F-9 nrPDB 35 0.058 1QVR-A nrPDB 34 0.075 6EMW-E nrPDB 34 0.076 6QI8-A nrPDB 34 0.078 5VC7-A nrPDB 34 0.078 2R65-A nrPDB 34 0.093 5G4G-A nrPDB 34 0.10 6EF0-H nrPDB 34 0.12 6E11-1 nrPDB 34 0.12 2IXE-A nrPDB 34 0.13 6ED3-A nrPDB 34 0.14 6D00-1 nrPDB 34 0.14 5VHP-E nrPDB 34 0.14 6EF3-H nrPDB 33 0.15 5VHO-F nrPDB 33 0.16 5W0T-A nrPDB 33 0.16 6EF0-L nrPDB 33 0.16 3CF0-A nrPDB 33 0.17 5U1D-B nrPDB 33 0.17 6MCK-A nrPDB 33 0.19 5C18-A nrPDB 33 0.19 6MSD-E nrPDB 33 0.19 5VHO-A nrPDB 33 0.19 5KWA-A nrPDB 33 0.20 5VFU-A nrPDB 33 0.22 3HU1-A nrPDB 33 0.23 1YE8-A nrPDB 33 0.24 5UJM-A nrPDB 33 0.24 4WW4-B nrPDB 33 0.25 3H1T-A nrPDB 33 0.25 4XGU-A nrPDB 33 0.25 5L3S-B nrPDB 33 0.26 1JBK-A nrPDB 33 0.26 5WVI-L nrPDB 33 0.28 6FVU-L nrPDB 33 0.28 6EPC-H nrPDB 33 0.28 5VFP-F nrPDB 33 0.29 3SYK-A nrPDB 33 0.31 3JC7-2 nrPDB 33 0.31 3PXG-A nrPDB 32 0.33 6EPD-M nrPDB 32 0.34 1IHU-A nrPDB 32 0.37 5FM7-A nrPDB 32 0.38 4XGC-D nrPDB 32 0.38 6HA8-V nrPDB 32 0.42 1LV7-A nrPDB 32 0.49 6EF0-M nrPDB 32 0.51 6AMN-A nrPDB 32 0.51 2AKY-A nrPDB 32 0.51 5D0U-A nrPDB 31 0.57 6MAT-A nrPDB 31 0.65 5VY8-A nrPDB 31 0.66 3HV2-A nrPDB 31 0.66 5V8F-A nrPDB 31 0.69 2X8A-A nrPDB 31 0.70 4M4W-J nrPDB 31 0.72 2FZ4-A nrPDB 31 0.72 2IUS-A nrPDB 31 0.76 3JC8-Ba nrPDB 31 0.77 3FHC-B nrPDB 31 0.77 1P4S-A nrPDB 31 0.84 4HSE-A nrPDB 31 0.84 2P65-A nrPDB 31 0.84 5E7P-A nrPDB 31 0.86 6F8L-G nrPDB 31 0.93 5A5B-M nrPDB 31 0.93 3CM0-A nrPDB 31 0.93 1FNN-A nrPDB 31 0.93 6B4I-E nrPDB 31 0.96 1G29-1 nrPDB 31 1.0 2V1U-A nrPDB 31 1.1 3FMO-B nrPDB 31 1.1 2FWR-A nrPDB 30 1.3 4B3F-X nrPDB 30 1.3 1IY1-A nrPDB 30 1.4 6EJ5-A nrPDB 30 1.4 5WWP-B nrPDB 30 1.4 2WJV-A nrPDB 30 1.4 5A9K-A nrPDB 30 1.5 2GXA-A nrPDB 30 1.5 1Y63-A nrPDB 30 1.5 5BQ5-A nrPDB 30 1.5 3JCP-I nrPDB 30 1.5 2BDT-A nrPDB 30 1.6 2DHR-A nrPDB 30 1.6 6GEJ-T nrPDB 30 1.8 6EF1-I nrPDB 30 1.8 6FVU-I nrPDB 30 2.0 5JZV-A nrPDB 30 2.1 3NXS-A nrPDB 30 2.1 2OG2-A nrPDB 29 2.2 4Z0H-O nrPDB 29 2.3 5LL6-h nrPDB 29 2.3 5L3R-B nrPDB 29 2.4 3HTX-A nrPDB 29 2.4 3IIK-A nrPDB 29 2.5 5ZFQ-A nrPDB 29 2.5 2D62-A nrPDB 29 2.6 4F4J-A nrPDB 29 2.9 6QUZ-B nrPDB 29 3.0 3SR0-A nrPDB 29 3.4 6FA9-A nrPDB 29 3.7 6CY1-A nrPDB 29 3.7 4Q7L-A nrPDB 29 3.9 2IUU-A nrPDB 29 4.1 2IUT-A nrPDB 29 4.3 4Z2C-C nrPDB 28 4.9 4YMS-J nrPDB 28 5.1 1ODF-A nrPDB 28 5.3 3CIA-A nrPDB 28 5.4 4E22-A nrPDB 28 5.5 3EC2-A nrPDB 28 5.6 4L16-A nrPDB 28 5.9 4YER-A nrPDB 28 6.0 2QZ4-A nrPDB 28 6.5 4Z8X-A nrPDB 28 6.8 4PHT-A nrPDB 28 6.8 3R8C-A nrPDB 28 7.1 2XZL-A nrPDB 28 7.9 5IJN-C nrPDB 28 8.1 2F03-A nrPDB 28 8.6 2IHY-A nrPDB 28 9.4 >1SXJ-E nrPDB Length = 354 Score = 467 bits (1201), Expect = e-132, Method: Composition-based stats. Identities = 353/354 (99%), Positives = 354/354 (100%) Query: 1 MSLWVDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESI 60 MSLWVDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESI Sbjct: 1 MSLWVDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESI 60 Query: 61 FGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQME 120 FGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQME Sbjct: 61 FGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQME 120 Query: 121 QVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAP 180 QVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAP Sbjct: 121 QVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAP 180 Query: 181 IKSRCLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESM 240 IKS+CLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESM Sbjct: 181 IKSQCLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESM 240 Query: 241 ALNNELALKSSSPIIKPDWIIVIHKLTRKIVKERSVNSLIECRAVLYDLLAHCIPANIIL 300 ALNNELALKSSSPIIKPDWIIVIHKLTRKIVKERSVNSLIECRAVLYDLLAHCIPANIIL Sbjct: 241 ALNNELALKSSSPIIKPDWIIVIHKLTRKIVKERSVNSLIECRAVLYDLLAHCIPANIIL 300 Query: 301 KELTFSLLDVETLNTTNKSSIIEYSSVFDERLSLGNKAIFHLEGFIAKVMCCLD 354 KELTFSLLDVETLNTTNKSSIIEYSSVFDERLSLGNKAIFHLEGFIAKVMCCLD Sbjct: 301 KELTFSLLDVETLNTTNKSSIIEYSSVFDERLSLGNKAIFHLEGFIAKVMCCLD 354 >1SXJ-D nrPDB Length = 353 Score = 373 bits (956), Expect = e-104, Method: Composition-based stats. Identities = 93/349 (26%), Positives = 164/349 (46%), Gaps = 28/349 (8%) Query: 4 WVDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGP 63 WV+KYRPK+L+ ++ + LK + + +LPH+L YGP GTGK + +AL + ++GP Sbjct: 27 WVEKYRPKNLDEVTAQDHAVTVLKK-TLKSANLPHMLFYGPPGTGKTSTILALTKELYGP 85 Query: 64 GVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVD 123 + + +I LELN S + I + N R+ + + K Sbjct: 86 DLMKSRI------------LELNA-SDERGISIVREKVKNFARLTVSKPSK--------- 123 Query: 124 FQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKS 183 D ++ YK +I++EA+S+T DAQ+ALRRTME YS R ++C+ ++ II P+ S Sbjct: 124 -HDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLAS 182 Query: 184 RCLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESMALN 243 +C R A S L + E ++ + +L+RI S G+LR + +L+S + Sbjct: 183 QCSKFRFKALDASNAIDRLRFISEQENVKCDD-GVLERILDISAGDLRRGITLLQSASKG 241 Query: 244 NEL---ALKSSSPIIKPDWIIVIHKLTRKIVKERSVNSLIECRAVLYDLLAHCIPANIIL 300 + +S ++ +V H + +IV++ E + + + A ++ Sbjct: 242 AQYLGDGKNITSTQVEELAGVVPHDILIEIVEKVKSGDFDEIKKYVNTFMKSGWSAASVV 301 Query: 301 KELTFSLLDVETLNTTNKSSIIEYSSVFDERLSLGNKAIFHLEGFIAKV 349 +L + + +T K+ I D RL+ G L + K+ Sbjct: 302 NQLHEYYITNDNFDTNFKNQISWLLFTTDSRLNNGTNEHIQLLNLLVKI 350 >2CHV-A nrPDB Length = 319 Score = 354 bits (907), Expect = 4e-98, Method: Composition-based stats. Identities = 93/353 (26%), Positives = 166/353 (47%), Gaps = 51/353 (14%) Query: 1 MSLWVDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESI 60 +WV+KYRP++L+ + +E+ LK ++ +++PHLL GP GTGK +AL + Sbjct: 4 FEIWVEKYRPRTLDEVVGQDEVIQRLKGYVER-KNIPHLLFSGPPGTGKTATAIALARDL 62 Query: 61 FGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQME 120 FG +R +E+ SD D V++ +KE A+ Sbjct: 63 FGEN-WRDNF-----------------------IEMNASDERGID--VVRHKIKEFARTA 96 Query: 121 QVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAP 180 + +K + ++EA++LT DAQAALRRTME YSK+ R I+ C+ +S II P Sbjct: 97 PIG--------GAPFKIIFLDEADALTADAQAALRRTMEMYSKSCRFILSCNYVSRIIEP 148 Query: 181 IKSRCLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESM 240 I+SRC + R + L ++ E +++ T+D L+ + S G+ R ++ L+ Sbjct: 149 IQSRCAVFRFKPVPKEAMKKRLLEICEKEGVKI-TEDGLEALIYISGGDFRKAINALQGA 207 Query: 241 ALNNELALKSSSPIIKPDWIIVIHKLTR-----KIVKERSVNSLIECRAVLYDLLA-HCI 294 A E ++ D I I R ++++ + +E R +L L+ + + Sbjct: 208 AAIGE--------VVDADTIYQITATARPEEMTELIQTALKGNFMEARELLDRLMVEYGM 259 Query: 295 PANIILKELTFSLLDVETLNTTNKSSIIEYSSVFDERLSLGNKAIFHLEGFIA 347 I+ +L ++ + + + K +I+ D RL+ G L+ ++A Sbjct: 260 SGEDIVAQLFREIISM-PIKDSLKVQLIDKLGEVDFRLTEGANERIQLDAYLA 311 >1IQP-A nrPDB Length = 327 Score = 294 bits (753), Expect = 3e-80, Method: Composition-based stats. Identities = 91/346 (26%), Positives = 164/346 (47%), Gaps = 41/346 (11%) Query: 4 WVDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGP 63 WV+KYRP+ L+ + E + LK + +PHLL GP G GK T +AL +FG Sbjct: 15 WVEKYRPQRLDDIVGQEHIVKRLKHYV-KTGSMPHLLFAGPPGVGKTTAALALARELFGE 73 Query: 64 GVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVD 123 +R LE+ SD + VI+E +KE A+ + + Sbjct: 74 N-WRHNF-----------------------LELNASDERGIN--VIREKVKEFARTKPIG 107 Query: 124 FQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKS 183 +K + ++EA++LT+DAQ ALRRTME +S N+R I+ C+ S II PI+S Sbjct: 108 --------GASFKIIFLDEADALTQDAQQALRRTMEMFSSNVRFILSCNYSSKIIEPIQS 159 Query: 184 RCLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESMALN 243 RC + R D +I+ L + NE ++L T++ L+ I + G++R ++ +L++ A Sbjct: 160 RCAIFRFRPLRDEDIAKRLRYIAENEGLEL-TEEGLQAILYIAEGDMRRAINILQAAAAL 218 Query: 244 NELALKSSSPIIKPDWIIVIHKLTRKIVKERSVNSLIECRAVLYD-LLAHCIPANIILKE 302 ++ + ++ + R+++ + ++ R L + LL + +L + Sbjct: 219 DKKITDENVFMVASRA--RPEDI-REMMLLALKGNFLKAREKLREILLKQGLSGEDVLVQ 275 Query: 303 LTFSLLDVETLNTTNKSSIIEYSSVFDERLSLGNKAIFHLEGFIAK 348 + + ++ + K + + ++ RL G I LE +A+ Sbjct: 276 MHKEVFNL-PIEEPKKVLLADKIGEYNFRLVEGANEIIQLEALLAQ 320 >2CHG-A nrPDB Length = 226 Score = 279 bits (712), Expect = 2e-75, Method: Composition-based stats. Identities = 78/267 (29%), Positives = 128/267 (47%), Gaps = 44/267 (16%) Query: 1 MSLWVDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESI 60 +WV+KYRP++L+ + +E+ LK ++ +++PHLL GP GTGK +AL + Sbjct: 4 FEIWVEKYRPRTLDEVVGQDEVIQRLKGYVER-KNIPHLLFSGPPGTGKTATAIALARDL 62 Query: 61 FGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQME 120 FG +R +E+ SD D V++ +KE A+ Sbjct: 63 FGEN-WRDNF-----------------------IEMNASDERGID--VVRHKIKEFARTA 96 Query: 121 QVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAP 180 + +K + ++EA++LT DAQAALRRTME YSK+ R I+ C+ +S II P Sbjct: 97 PIG--------GAPFKIIFLDEADALTADAQAALRRTMEMYSKSCRFILSCNYVSRIIEP 148 Query: 181 IKSRCLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESM 240 I+SRC + R + L ++ E +++ T+D L+ + S G+ R ++ L+ Sbjct: 149 IQSRCAVFRFKPVPKEAMKKRLLEICEKEGVKI-TEDGLEALIYISGGDFRKAINALQGA 207 Query: 241 ALNNELALKSSSPIIKPDWIIVIHKLT 267 A E ++ D I I Sbjct: 208 AAIGE--------VVDADTIYQITATA 226 >1SXJ-B nrPDB Length = 323 Score = 246 bits (628), Expect = 1e-65, Method: Composition-based stats. Identities = 85/349 (24%), Positives = 156/349 (44%), Gaps = 46/349 (13%) Query: 4 WVDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGP 63 WV+KYRP+ L+ + N+E + L+ ++ + ++PH+++ G G GK T L + G Sbjct: 11 WVEKYRPQVLSDIVGNKETIDRLQQIA-KDGNMPHMIISGMPGIGKTTSVHCLAHELLG- 68 Query: 64 GVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVD 123 R + LE+ SD D V++ +K AQ +++ Sbjct: 69 ---------RSYADGV--------------LELNASDDRGID--VVRNQIKHFAQ-KKLH 102 Query: 124 FQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKS 183 K +K VI++EA+S+T AQ ALRRTME YS + R C+ + II P++S Sbjct: 103 LPPGK------HKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQS 156 Query: 184 RCLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESMALN 243 +C ++R SD ++ L ++ E ++ T D L+ I + G++R ++ L+S Sbjct: 157 QCAILRYSKLSDEDVLKRLLQIIKLEDVKY-TNDGLEAIIFTAEGDMRQAINNLQSTVAG 215 Query: 244 NELALKSSSPIIKPDWIIVIHKLTRK-IVKERSVNSLIE--CRAVLYDLLAHCIPANIIL 300 + L + D + I IVK+ + S +E + + DL + I+ Sbjct: 216 HGL--------VNADNVFKIVDSPHPLIVKKMLLASNLEDSIQILRTDLWKKGYSSIDIV 267 Query: 301 KELTFSLLDVETLNTTNKSSIIEYSSVFDERLSLGNKAIFHLEGFIAKV 349 ++ + + + +I+ + R+ G L +AK+ Sbjct: 268 TTSFRVTKNLAQVKESVRLEMIKEIGLTHMRILEGVGTYLQLASMLAKI 316 >1SXJ-C nrPDB Length = 340 Score = 237 bits (605), Expect = 5e-63, Method: Composition-based stats. Identities = 83/349 (23%), Positives = 154/349 (44%), Gaps = 39/349 (11%) Query: 4 WVDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGP 63 WV+KYRP++L+ + E+ ++ D+ + LPHLL YGP GTGK + +AL I+G Sbjct: 15 WVEKYRPETLDEVYGQNEVITTVRKFVDEGK-LPHLLFYGPPGTGKTSTIVALAREIYGK 73 Query: 64 GVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVD 123 SN LELN SD D V++ +K+ A Q+ Sbjct: 74 NY-------------SNMVLELN-----------ASDDRGID--VVRNQIKDFASTRQI- 106 Query: 124 FQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKS 183 + +K +I++EA+++T AQ ALRR +E+Y+KN R ++ + + + S Sbjct: 107 -------FSKGFKLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLS 159 Query: 184 RCLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLES--MA 241 +C R I +++V+ +E+++L + + K + + SNG++R L +L+S Sbjct: 160 QCTRFRFQPLPQEAIERRIANVLVHEKLKL-SPNAEKALIELSNGDMRRVLNVLQSCKAT 218 Query: 242 LNNELALKSSSPIIKPDWIIVIHKLTRKIVKERSVNSLIECRAVLYDL-LAHCIPANIIL 300 L+N + S +I + ++K + L + A + ++ Sbjct: 219 LDNPDEDEISDDVIYECCGAPRPSDLKAVLKSILEDDWGTAHYTLNKVRSAKGLALIDLI 278 Query: 301 KELTFSLLDVETLNTTNKSSIIEYSSVFDERLSLGNKAIFHLEGFIAKV 349 + + L D E N + ++ + + +S G I + Sbjct: 279 EGIVKILEDYELQNEETRVHLLTKLADIEYSISKGGNDQIQGSAVIGAI 327 >3U5Z-B nrPDB Length = 324 Score = 223 bits (567), Expect = 1e-58, Method: Composition-based stats. Identities = 77/345 (22%), Positives = 134/345 (38%), Gaps = 91/345 (26%) Query: 6 DKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGP-NGTGKKTRCMALLESIFGPG 64 KYRP +++ KS++ + + +PH++L+ P GTGK T AL + Sbjct: 18 QKYRPSTIDECILPAFDKETFKSITSKGK-IPHIILHSPSPGTGKTTVAKALCHDV---- 72 Query: 65 VYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDF 124 D+ FV S+ K++ ++ L A D Sbjct: 73 ----NADM-MFVNGSDCKIDF-----------------------VRGPLTNFASAASFD- 103 Query: 125 QDSKDGLAHRYKCVIINEAN-SLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKS 183 R K ++I+E + S ++Q LR ME YS N +I+ +++ II P++S Sbjct: 104 --------GRQKVIVIDEFDRSGLAESQRHLRSFMEAYSSNCSIIITANNIDGIIKPLQS 155 Query: 184 RCLLIRCPAPSDSEI-------STILSDVVTNERIQLET------------KDILKRIA- 223 RC +I P+D + L+++ +E I + D K I Sbjct: 156 RCRVITFGQPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGE 215 Query: 224 ---QASNGNLRVSLL------------MLESMALNNELALKSSSPIIKPDWIIVIHKLTR 268 +S G L +L +LES+ + L++ +P D+ + KL Sbjct: 216 LDSYSSKGVLDAGILSLVTNDRGAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAE 275 Query: 269 KIVKERSVNSLIECRAVLYDLLA-----HCIPANIILKELTFSLL 308 +I + S+I +Y+++ H I AN EL + L Sbjct: 276 EIYSRVTPQSIIR----MYEIVGENNQYHGIAANT---ELHLAYL 313 >3GLF-B nrPDB Length = 395 Score = 158 bits (400), Expect = 3e-39, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 112/303 (36%), Gaps = 20/303 (6%) Query: 1 MSLWVDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESI 60 + K+RP++ + E + L + R L G G GK + L + + Sbjct: 25 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 84 Query: 61 FGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQME 120 + T + +++ D + ++ L + Q Sbjct: 85 --------NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYA 136 Query: 121 QVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAP 180 R+K +I+E + L++ + AL +T+E+ ++++ ++ + Sbjct: 137 P---------ARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVT 187 Query: 181 IKSRCLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESM 240 I SRCL A +I L ++ E I E + L+ +A+A+ G+LR +L + + Sbjct: 188 ILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPR-ALQLLARAAEGSLRDALSLTDQA 246 Query: 241 ALNNELALKSSSPIIKPDWIIVIHKLTRKIVKERSVNSLIECRAVLYDLLAHCIPANIIL 300 + + + + + + + +V+ + A++ + A I +L Sbjct: 247 IASGDGQVSTQA--VSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALL 304 Query: 301 KEL 303 E+ Sbjct: 305 VEM 307 >1NJG-A nrPDB Length = 250 Score = 153 bits (387), Expect = 9e-38, Method: Composition-based stats. Identities = 43/252 (17%), Positives = 96/252 (38%), Gaps = 18/252 (7%) Query: 1 MSLWVDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESI 60 + K+RP++ + E + L + R L G G GK + L + + Sbjct: 10 YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 69 Query: 61 FGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQME 120 + T + +++ D + ++ L + Q Sbjct: 70 --------NCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYA 121 Query: 121 QVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAP 180 R+K +I+E + L++ + AL +T+E+ ++++ ++ + Sbjct: 122 P---------ARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVT 172 Query: 181 IKSRCLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESM 240 I SRCL A +I L ++ E I E + L+ +A+A+ G+LR +L + + Sbjct: 173 ILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPR-ALQLLARAAEGSLRDALSLTDQA 231 Query: 241 ALNNELALKSSS 252 + + + + + Sbjct: 232 IASGDGQVSTQA 243 >1SXJ-A nrPDB Length = 516 Score = 85.7 bits (210), Expect = 3e-17, Method: Composition-based stats. Identities = 45/256 (17%), Positives = 97/256 (37%), Gaps = 50/256 (19%) Query: 2 SLWVDKYRPKSLNALSHNEELTNFLKSLS-----DQPRDLPHL-----------LLYGPN 45 LW KY P +L + N+ LK+ + H +LYGP Sbjct: 27 KLWTVKYAPTNLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPP 86 Query: 46 GTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNND 105 G GK T + + + LE SD+ + Sbjct: 87 GIGKTTAAHLVAQEL-----------------------------GYDILEQNASDVRSKT 117 Query: 106 RIV--IQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSK 163 + ++ L ++ + + L ++ +I++E + ++ + + + + K Sbjct: 118 LLNAGVKNALDNMSVVGYFKHNEEAQNLNGKHFVIIMDEVDGMSGGDRGGVGQLAQFCRK 177 Query: 164 -NIRLIMVCDSMS-PIIAPIKSRCLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKR 221 + LI++C+ + P + P CL I+ P + I + L + E+ +L+ +++ R Sbjct: 178 TSTPLILICNERNLPKMRPFDRVCLDIQFRRPDANSIKSRLMTIAIREKFKLD-PNVIDR 236 Query: 222 IAQASNGNLRVSLLML 237 + Q + G++R + +L Sbjct: 237 LIQTTRGDIRQVINLL 252 >3PVS-A nrPDB Length = 447 Score = 70.3 bits (170), Expect = 1e-12, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 88/262 (33%), Gaps = 57/262 (21%) Query: 7 KYRPKSLNALSHNEELTNFLKSL--SDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPG 64 + RP++L + L K L + + L ++L+GP GTGK T + Sbjct: 19 RMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIAR------ 72 Query: 65 VYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDF 124 DV + ++ E I+E ++ Q Sbjct: 73 --YANADVERISAVTSGVKE------------------------IREAIERARQNRN--- 103 Query: 125 QDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVC--DSMSPIIAPIK 182 A R + ++E + K Q A +E I I + + + + Sbjct: 104 -------AGRRTILFVDEVHRFNKSQQDAFLPHIE--DGTITFIGATTENPSFELNSALL 154 Query: 183 SRCLLIRCPAPSDSEISTILSDVVTNERIQLE------TKDILKRIAQASNGNLRVSLLM 236 SR + + S +I +L+ + ++ + + IA+ NG+ R +L Sbjct: 155 SRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNT 214 Query: 237 LESMALNNEL---ALKSSSPII 255 LE MA E+ + P + Sbjct: 215 LEMMADMAEVDDSGKRVLKPEL 236 >1HQC-A nrPDB Length = 324 Score = 65.6 bits (158), Expect = 3e-11, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 79/248 (31%), Gaps = 70/248 (28%) Query: 9 RPKSLNALSHNEELTNFLKSLSDQPRD----LPHLLLYGPNGTGKKTRCMALLESIFGPG 64 RPK+L+ E L L+ + + L HLLL+GP G GK T + + Sbjct: 7 RPKTLDEYIGQERLKQKLRVYLEAAKARKEPLEHLLLFGPPGLGKTTLAHVIAHEL---- 62 Query: 65 VYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDF 124 + L V S P A + D Sbjct: 63 -----------------GVNLRVTSGP-------------------------AIEKPGDL 80 Query: 125 QDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNI----------------RLI 168 + I+E + L++ A+ L ME + +I R Sbjct: 81 AAILANSLEEGDILFIDEIHRLSRQAEEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFT 140 Query: 169 M--VCDSMSPIIAPIKSRCLLI-RCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQA 225 + I AP+ SR ++ + E++ + +++ + L+ I + Sbjct: 141 LIGATTRPGLITAPLLSRFGIVEHLEYYTPEELAQGVMRDARLLGVRITEEAALE-IGRR 199 Query: 226 SNGNLRVS 233 S G +RV+ Sbjct: 200 SRGTMRVA 207 >4D81-A nrPDB Length = 283 Score = 51.8 bits (122), Expect = 5e-07, Method: Composition-based stats. Identities = 42/265 (15%), Positives = 80/265 (30%), Gaps = 36/265 (13%) Query: 5 VDKYRPK-SLNALSHNEELTNFLKSLSDQPRDLPHL---------LLYGPNGTGKKTRCM 54 V K +PK +LN + E++ LK P P L LLYGP G GK Sbjct: 4 VMKEKPKVTLNEIVGLEDVKEALKEAVVYPSKRPDLFPLGWPRGILLYGPPGCGKTMIAA 63 Query: 55 ALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLK 114 A+ + ++ + K + + L + + LL Sbjct: 64 AVANELDSEFIHVDAASIMSKWLGEAEKNVAKIFKTARELSKKENKPAIIFIDELDALLA 123 Query: 115 EVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSM 174 S+ G R + + E + L + + +I + Sbjct: 124 SY---------TSEVGGEARVRNQFLKEMDGLADKNE----------ISKVYVIGATNKP 164 Query: 175 SPIIAPIKSRC-LLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNG----N 229 + P R I P + +L + ++L+ L+ +A+ ++G + Sbjct: 165 WRLDEPFLRRFQKRIYITLPDKAHRLELLKHYSSK--VKLDPNVNLEELAELTDGYTASD 222 Query: 230 LRVSLLMLESMALNNELALKSSSPI 254 +R + + P Sbjct: 223 IRDIVQSAHMRVVKEMFEKNLQEPR 247 >2XSZ-D nrPDB Length = 378 Score = 51.0 bits (120), Expect = 7e-07, Method: Composition-based stats. Identities = 36/242 (14%), Positives = 89/242 (36%), Gaps = 41/242 (16%) Query: 39 LLLYGPNGTGKKTRCMALLE--------------SIFGPGVYRLKIDVRQFVTASNRKLE 84 +L+ G GTGK M + + IF + + + + F + +++ Sbjct: 88 VLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRIK 147 Query: 85 LNVVSSPYHLEITPSDMGNN-----------DRIVIQELLKEVAQMEQVDFQDSKDGLAH 133 + + + D+ N+ D I+ ++E + ++++ Sbjct: 148 EGPPGVVHTVSLHEIDVINSRTQGFLALFSGDTGEIKSEVREQINAKVAEWREEGKAEII 207 Query: 134 RYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCD------------SMSPIIAPI 181 + I+E + L ++ + L R +E + LIM + S I + Sbjct: 208 P-GVLFIDEVHMLDIESFSFLNRALESDMAPV-LIMATNRGITRIRGTSYQSPHGIPIDL 265 Query: 182 KSRCLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQAS-NGNLRVSLLMLESM 240 R L++ S+ + IL E +++ ++D + + +LR ++ ++ + Sbjct: 266 LDRLLIVSTTPYSEKDTKQILRIRCEEEDVEM-SEDAYTVLTRIGLETSLRYAIQLITAA 324 Query: 241 AL 242 +L Sbjct: 325 SL 326 >1IN6-A nrPDB Length = 334 Score = 47.9 bits (112), Expect = 7e-06, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Query: 5 VDKYRPKSLNALSHNEELTNFL----KSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESI 60 V RPKSL+ E + L ++ + L H+LL GP G G+ T + + Sbjct: 16 VQFLRPKSLDEFIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGRTTLAHIIASEL 75 >4LGM-A nrPDB Length = 295 Score = 47.9 bits (112), Expect = 7e-06, Method: Composition-based stats. Identities = 40/231 (17%), Positives = 73/231 (31%), Gaps = 32/231 (13%) Query: 9 RPK-SLNALSHNEELTNFLKSLSDQPRDLPHL---------LLYGPNGTGKKTRCMALLE 58 +PK S + +++ L+ P P L LLYGP G GK A+ Sbjct: 20 KPKVSFKDIVGLDDVKEALREAIIYPTKRPDLFPLGWPRGILLYGPPGCGKTMIAAAVAN 79 Query: 59 SIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQ 118 I + V K NV S N I+ + L Sbjct: 80 EIDSIFMQLDAASVMSKWLGEAEKNVANVFKMARE----ESKKQNKPAIIFIDQL----- 130 Query: 119 MEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPII 178 + ++ G R + + E + L ++ + +I + + Sbjct: 131 DALLGVYSTEVGGEARVRNQFLKEMDGLLDKSENY----------KVYVIGATNKPWRLD 180 Query: 179 APIKSRC-LLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNG 228 R I P P + ++ + I+L+T+ L+ +A+ + G Sbjct: 181 EAFLRRFQKRIYVPLPDYEQRLSLFKYYTSK--IKLDTEVSLEELAKLTEG 229 >2XSZ-A nrPDB Length = 367 Score = 46.8 bits (109), Expect = 2e-05, Method: Composition-based stats. Identities = 42/257 (16%), Positives = 91/257 (35%), Gaps = 45/257 (17%) Query: 39 LLLYGPNGTGKKTRCMALLESI--------------FGPGVYRLKIDVRQFVTASNRKLE 84 +LL GP GTGK +A+ + + + + + ++ + F A +++ Sbjct: 80 VLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIK 139 Query: 85 LNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQ-MEQVDFQDSKDGLAHRYKCV----- 138 + + D+ N Q++L + Q M+ + + K V Sbjct: 140 EGPPGIIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYID 199 Query: 139 -----------IINEANSLTKDAQAALRRTMEK-------YSKNIRLIMV-----CDSMS 175 ++E + L + L R +E ++ N ++ S Sbjct: 200 QGIAELVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPH 259 Query: 176 PIIAPIKSRCLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQA-SNGNLRVSL 234 I + R ++IR + E+ I+ E I + +++ L + + + LR S+ Sbjct: 260 GIPLDLLDRVMIIRTMLYTPQEMKQIIKIRAQTEGINI-SEEALNHLGEIGTKTTLRYSV 318 Query: 235 LMLESMALNNELALKSS 251 +L L ++ K S Sbjct: 319 QLLTPANLLAKINGKDS 335 >6EMW-B nrPDB Length = 225 Score = 44.1 bits (102), Expect = 9e-05, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 51/154 (33%), Gaps = 34/154 (22%) Query: 14 NALSHNEELTNFLKSLSDQPRD--------LPHLLLYGPNGTGKKTRCMALLESIFGPGV 65 + ++ N + + R + + GP G GK AL ES+FG Sbjct: 21 ERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDD 80 Query: 66 YRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQ 125 +++D+ +F + + + P +G++D + E ++ Sbjct: 81 AMIRVDMSEF---------MEKHAVSRLVGAPPGYVGHDDGGQLTEKVRR---------- 121 Query: 126 DSKDGLAHRYKCVIINEANSLTKDAQAALRRTME 159 Y ++ +E D L + ++ Sbjct: 122 -------KPYSVILFDEIEKAHPDVFNILLQVLD 148 >4LCB-A nrPDB Length = 367 Score = 42.5 bits (98), Expect = 3e-04, Method: Composition-based stats. Identities = 44/263 (16%), Positives = 84/263 (31%), Gaps = 37/263 (14%) Query: 7 KYRPK-SLNALSHNEELTNFLKSLSDQPRDLPHL---------LLYGPNGTGKKTRCMAL 56 K +PK S + + +++ LK P P L LLYGP G GK A+ Sbjct: 91 KEKPKVSFSDIVGLDDVKEALKEAIIYPSKRPDLFPLGWPRGILLYGPPGNGKTMLAAAV 150 Query: 57 LESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEV 116 I Y + +D ++ + E NV I + E+ Sbjct: 151 ANEI---DSYFIHVDAASIMSKWLGEAEKNVAKIFNTAREYSKKDNKPAIIFVDEI---- 203 Query: 117 AQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSP 176 + S+ G R + + E + + + + + +I + Sbjct: 204 --DALLGTYTSEVGGEVRVRNQFLKEMDGIMDKNENYM----------VYVIGATNKPWR 251 Query: 177 IIAPIKSRC-LLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNG----NLR 231 + P R I P P ++ + + ++L D L+ +A+ + G ++R Sbjct: 252 LDEPFLRRFQKRIYVPLPDFNQRLALFKYYTSK--VKLGNVD-LQELAKMTEGYSASDIR 308 Query: 232 VSLLMLESMALNNELALKSSSPI 254 + + S P Sbjct: 309 DIVQSAHMRVVKEMFEKNLSEPR 331 >6B5C-A nrPDB Length = 307 Score = 42.5 bits (98), Expect = 3e-04, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 92/304 (30%), Gaps = 52/304 (17%) Query: 14 NALSHNEELTNFLKSLSDQPRDLPH-----------LLLYGPNGTGKKTRCMALLESIFG 62 + ++ EE L+ P +P +L+ GP GTGK A+ Sbjct: 25 DDIADLEEAKKLLREAVVLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGT 84 Query: 63 PGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQV 122 + + KL + T + D I + + Sbjct: 85 TFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDQIDSICSRRGTSD------- 137 Query: 123 DFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIK 182 + + R K ++ + + + + + SK + ++ + I ++ Sbjct: 138 -----EHEASRRVKSELLIQMDGVGGALEN------DDPSKMVMVLAATNFPWDIDEALR 186 Query: 183 SRC-LLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNG------------- 228 R I P P+ + +L + ++L+ L+ IA+ G Sbjct: 187 RRLEKRIYIPLPTAKGRAELLK--INLREVELDPDIQLEDIAEKIEGYSGADITNVCRDA 244 Query: 229 ---NLRVSLLMLESMALNNELALKSSSPIIKPDWIIVIHKLTRKIVKERSVNSLIECRAV 285 +R + L + + P+ K D+ + +KI K S L + Sbjct: 245 SLMAMRRRINGLSPEEIRALSKEELQMPVTKGDFELA----LKKIAKSVSAADLEKYEKW 300 Query: 286 LYDL 289 + + Sbjct: 301 MVEF 304 >6EM8-A nrPDB Length = 818 Score = 42.5 bits (98), Expect = 3e-04, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 51/154 (33%), Gaps = 34/154 (22%) Query: 14 NALSHNEELTNFLKSLSDQPRD--------LPHLLLYGPNGTGKKTRCMALLESIFGPGV 65 + ++ N + + R + + GP G GK AL ES+FG Sbjct: 508 ERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDD 567 Query: 66 YRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQ 125 +++D+ +F + + + P +G++D + E ++ Sbjct: 568 AMIRVDMSEF---------MEKHAVSRLVGAPPGYVGHDDGGQLTEKVRR---------- 608 Query: 126 DSKDGLAHRYKCVIINEANSLTKDAQAALRRTME 159 Y ++ +E D L + ++ Sbjct: 609 -------KPYSVILFDEIEKAHPDVFNILLQVLD 635 Score = 34.8 bits (78), Expect = 0.061, Method: Composition-based stats. Identities = 46/284 (16%), Positives = 101/284 (35%), Gaps = 44/284 (15%) Query: 12 SLNALSHNE-ELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKI 70 +L+ + + E+T ++ LS + ++ P L+ G G GK L ++I V Sbjct: 178 TLDPVIGRDKEITRVIEVLSRRTKNNPVLI--GEPGVGKTAIAEGLAQAIVNNEVPETLK 235 Query: 71 DVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDG 130 D R V+S + + ++++++E+ Q V Sbjct: 236 DKR-------------VMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGNV-------- 274 Query: 131 LAHRYKCVIINEANSL--TKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKSRCLLI 188 + I+E ++L A+ A+ + R + C + + Sbjct: 275 ------ILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDE--------Y 320 Query: 189 RCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESMALNNELAL 248 R D+ + V +E ++T ILK + + R+++ E++ +L+ Sbjct: 321 RKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISD-EAIEAAVKLSN 379 Query: 249 KSSSPIIKPDWIIVIHKLT---RKIVKERSVNSLIECRAVLYDL 289 + S PD I + ++ + N+L E + + Sbjct: 380 RYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIEKV 423 >6QI9-D nrPDB Length = 463 Score = 42.1 bits (97), Expect = 4e-04, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 71/179 (39%), Gaps = 21/179 (11%) Query: 77 TASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYK 136 T S ++++ + L + D G V +++ +VA+ + + G Sbjct: 241 TVSLHEIDVINSRTQGFLALFSGDTGEIKSEVREQINAKVAEWREEGKAEIIPG------ 294 Query: 137 CVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCD------------SMSPIIAPIKSR 184 + I+E + L ++ + L R +E + LIM + S I + R Sbjct: 295 VLFIDEVHMLDIESFSFLNRALESDMAPV-LIMATNRGITRIRGTSYQSPHGIPIDLLDR 353 Query: 185 CLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQAS-NGNLRVSLLMLESMAL 242 L++ S+ + IL E +++ ++D + + +LR ++ ++ + +L Sbjct: 354 LLIVSTTPYSEKDTKQILRIRCEEEDVEM-SEDAYTVLTRIGLETSLRYAIQLITAASL 411 Score = 28.7 bits (62), Expect = 4.2, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 26/73 (35%), Gaps = 1/73 (1%) Query: 39 LLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITP 98 +L+ G GTGK M + +++ GP I + + K E + + + Sbjct: 73 VLIAGQPGTGKTAIAMGMAQAL-GPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRI 131 Query: 99 SDMGNNDRIVIQE 111 + + E Sbjct: 132 KEETEIIEGEVVE 144 >5WC0-A nrPDB Length = 472 Score = 41.8 bits (96), Expect = 4e-04, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 59/167 (35%), Gaps = 20/167 (11%) Query: 12 SLNALSHNEELTNFLKSLSDQPRDLPH-----------LLLYGPNGTGKKTRCMALLESI 60 SL+ + ++ L P +P ++L GP GTGK A+ Sbjct: 191 SLDDIIGMHDVKQVLHEAVTLPLLVPEFFQGLRSPWKAMVLAGPPGTGKTLIARAIASES 250 Query: 61 FGPGVYRLKIDVRQFVTASNRKL-----ELNVVSSPYHLEITPSDMGNNDRIVIQELLKE 115 D+ + K+ EL +P + I D R E E Sbjct: 251 SSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSIIFIDQIDTLGGQRGNSGEH--E 308 Query: 116 VAQMEQVDFQDSKDGLAHRY--KCVIINEANSLTKDAQAALRRTMEK 160 ++ + +F DG +++ + V + A ++ + ALRR EK Sbjct: 309 ASRRVKSEFLVQMDGSQNKFDSRRVFVLAATNIPWELDEALRRRFEK 355 >6B5D-A nrPDB Length = 309 Score = 41.8 bits (96), Expect = 5e-04, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 59/167 (35%), Gaps = 20/167 (11%) Query: 12 SLNALSHNEELTNFLKSLSDQPRDLPH-----------LLLYGPNGTGKKTRCMALLESI 60 SL+ + ++ L P +P ++L GP GTGK A+ Sbjct: 28 SLDDIIGMHDVKQVLHEAVTLPLLVPEFFQGLRSPWKAMVLAGPPGTGKTLIARAIASES 87 Query: 61 FGPGVYRLKIDVRQFVTASNRKL-----ELNVVSSPYHLEITPSDMGNNDRIVIQELLKE 115 D+ + K+ EL +P + I D R E E Sbjct: 88 SSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSIIFIDEIDTLGGQRGNSGEH--E 145 Query: 116 VAQMEQVDFQDSKDGLAHRY--KCVIINEANSLTKDAQAALRRTMEK 160 ++ + +F DG +++ + V + A ++ + ALRR EK Sbjct: 146 ASRRVKSEFLVQMDGSQNKFDSRRVFVLAATNIPWELDEALRRRFEK 192 >1XXI-E nrPDB Length = 334 Score = 41.8 bits (96), Expect = 5e-04, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 56/169 (33%), Gaps = 22/169 (13%) Query: 39 LLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITP 98 LL+ G G AL + K +L + + P + + P Sbjct: 27 LLIQALPGMGDDALIYALSRYLLCQQPQGHK----SCGHCRGCQL-MQAGTHPDYYTLAP 81 Query: 99 SDMGN----NDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAAL 154 N + + E L E A++ K V + +A LT A AL Sbjct: 82 EKGKNTLGVDAVREVTEKLNEHARL-------------GGAKVVWVTDAALLTDAAANAL 128 Query: 155 RRTMEKYSKNIRLIMVCDSMSPIIAPIKSRCLLIRCPAPSDSEISTILS 203 +T+E+ + ++A ++SRC L P + T LS Sbjct: 129 LKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLS 177 >6AP1-A nrPDB Length = 519 Score = 41.4 bits (95), Expect = 6e-04, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 56/160 (35%), Gaps = 13/160 (8%) Query: 14 NALSHNEELTNFLKSLSDQPRDLPHL-----------LLYGPNGTGKKTRCMALLESIFG 62 ++ E LK P PHL LLYGP GTGK A+ Sbjct: 34 EDVAGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGTGKSYLAKAVATEANS 93 Query: 63 PGVYRLKIDVRQFVTASNRKL--ELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQME 120 D+ + KL +L ++ I D + E E ++ Sbjct: 94 TFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFIDEVDALTGTRGEGESEASRRI 153 Query: 121 QVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEK 160 + + +G+ + + V++ A ++ +A+RR E+ Sbjct: 154 KTELLVQMNGVGNDSQGVLVLGATNIPWQLDSAIRRRFER 193 >5VHP-C nrPDB Length = 266 Score = 41.4 bits (95), Expect = 6e-04, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 68/214 (31%), Gaps = 38/214 (17%) Query: 5 VDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHL------------LLYGPNGTGKKTR 52 V+K + + ++ +K + + P P L LLYGP GTGK Sbjct: 11 VEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLL 70 Query: 53 CMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQEL 112 A+ V+ S + + E+ + I+ + Sbjct: 71 ARAVAH---------HTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDE 121 Query: 113 LKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCD 172 + + ++ D R ++N+ + +KNI++IM + Sbjct: 122 IDSIGSSR-LEGGSGGDSEVQRTMLELLNQLDGFEA-------------TKNIKVIMATN 167 Query: 173 SMSPIIAPIKSRCLL---IRCPAPSDSEISTILS 203 + + + + + I P P++ IL Sbjct: 168 RIDILDSALLRPGRIDRKIEFPPPNEEARLDILK 201 >3K1J-A nrPDB Length = 604 Score = 41.4 bits (95), Expect = 6e-04, Method: Composition-based stats. Identities = 49/294 (16%), Positives = 94/294 (31%), Gaps = 80/294 (27%) Query: 11 KSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGV----- 65 K ++ + E +K+ ++Q R H+LL G GTGK A+ E + + Sbjct: 38 KLIDQVIGQEHAVEVIKTAANQKR---HVLLIGEPGTGKSMLGQAMAELLPTETLEDILV 94 Query: 66 --------------------------YRLKIDVRQFVTASNRKLELNVV----------- 88 YR K ++ V +SN +L+ V+ Sbjct: 95 FPNPEDENMPRIKTVPACQGRRIVEKYREKAKSQESVKSSNMRLKSTVLVPKLLVDNCGR 154 Query: 89 SSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYK-CVIINEANSLT 147 + ++ T + G V + + + + +K + I+E +L+ Sbjct: 155 TKAPFIDATGAHAGALLGDVRHDPFQSGGLGTPAHERVEPGMIHRAHKGVLFIDEIATLS 214 Query: 148 KDAQAALRRTM-----------EKYSKN--------IRLIMVC----DSMSPIIAPIKSR 184 Q +L M E S ++V D++ + ++SR Sbjct: 215 LKMQQSLLTAMQEKKFPITGQSEMSSGAMVRTEPVPCDFVLVAAGNLDTVDKMHPALRSR 274 Query: 185 CL------LIRCPAPSDSEISTILSDVVTNE-----RIQLETKDILKRIAQASN 227 +R P E L V E +I TK+ ++ I + + Sbjct: 275 IRGYGYEVYMRTTMPDTIENRRKLVQFVAQEVKRDGKIPHFTKEAVEEIVREAQ 328 >5M32-h nrPDB Length = 355 Score = 41.4 bits (95), Expect = 6e-04, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 68/214 (31%), Gaps = 38/214 (17%) Query: 5 VDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHL------------LLYGPNGTGKKTR 52 V+K + + ++ +K + + P P L LLYGP GTGK Sbjct: 103 VEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLL 162 Query: 53 CMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQEL 112 A+ V+ S + + E+ + I+ + Sbjct: 163 ARAVAH---------HTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDE 213 Query: 113 LKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCD 172 + + ++ D R ++N+ + +KNI++IM + Sbjct: 214 IDSIGSSR-LEGGSGGDSEVQRTMLELLNQLDGFEA-------------TKNIKVIMATN 259 Query: 173 SMSPIIAPIKSRCLL---IRCPAPSDSEISTILS 203 + + + + + I P P++ IL Sbjct: 260 RIDILDSALLRPGRIDRKIEFPPPNEEARLDILK 293 >5EQT-A nrPDB Length = 257 Score = 41.0 bits (94), Expect = 8e-04, Method: Composition-based stats. Identities = 42/249 (16%), Positives = 80/249 (32%), Gaps = 75/249 (30%) Query: 12 SLNALSHNEELTNFLKSLSDQPRDLPHL------------LLYGPNGTGKKTRCMALLES 59 + N + ++ L+ + P P L LLYGP G GK AL Sbjct: 3 TYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKALAHE 62 Query: 60 IFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQM 119 + + + ++++ + E A++ Sbjct: 63 V------------------------------------NATFIRVVGSELVRKYIGEGARL 86 Query: 120 EQVDFQDSKDGLAHRYKCVIINEANSL-------TKDAQAALRRTM-----EK----YSK 163 F+ +K+ + I+E +++ T + + RT+ E Sbjct: 87 VHELFELAKEKAPT---IIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRG 143 Query: 164 NIRLIMVCDSMSPIIAPIKSRCLLI----RCPAPSDSEISTILSDVVTNERIQLETKDIL 219 N+++I + I+ P R P P IL V R++L+ D L Sbjct: 144 NVKVIAATNRPD-ILDPALLRPGRFDRLIEVPLPDFEGRLEILK--VHTRRMKLKGVD-L 199 Query: 220 KRIAQASNG 228 + IA+ + G Sbjct: 200 RAIAEMTEG 208 >4YPL-A nrPDB Length = 555 Score = 41.0 bits (94), Expect = 8e-04, Method: Composition-based stats. Identities = 29/248 (11%), Positives = 74/248 (29%), Gaps = 53/248 (21%) Query: 6 DKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGV 65 D Y K + L D P L+L GP G GK + ++ S+ Sbjct: 80 DHYGLKDVKERILEYLAVRQLTQGLDVRNKAPILVLVGPPGVGKTSLGRSIARSM----- 134 Query: 66 YRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQ 125 ++ L V + + +K+V + Sbjct: 135 -----------NRKFHRISLGGVRDEAEIRGHRRTYIGAMPGKLIHAMKQVGVINP---- 179 Query: 126 DSKDGLAHRYKCVIINEANSLTK----DAQAALRRTMEKYSKNI---------------R 166 +++++ + ++ D +A+ ++ N Sbjct: 180 -----------VILLDQIDKMSSDWRGDPASAMLEVLDPEQNNTFTDHYLDVPYDLSKVF 228 Query: 167 LIMVCDSMSPIIAPIKSRCLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQAS 226 I +++ I P+ R +I P ++ E I + ++++ + ++ + + Sbjct: 229 FITTANTLQTIPRPLLDRMEVIEIPGYTNMEKQAIARQYLWPKQVR---ESGMEGRIEVT 285 Query: 227 NGNLRVSL 234 + + + Sbjct: 286 DAAILRVI 293 >5GJQ-J nrPDB Length = 406 Score = 41.0 bits (94), Expect = 8e-04, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 68/214 (31%), Gaps = 38/214 (17%) Query: 5 VDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHL------------LLYGPNGTGKKTR 52 V+K + + ++ +K + + P P L LLYGP GTGK Sbjct: 140 VEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLL 199 Query: 53 CMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQEL 112 A+ V+ S + + E+ + I+ + Sbjct: 200 ARAVAH---------HTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDE 250 Query: 113 LKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCD 172 + + ++ D R ++N+ + +KNI++IM + Sbjct: 251 IDSIGSSR-LEGGSGGDSEVQRTMLELLNQLDGFEA-------------TKNIKVIMATN 296 Query: 173 SMSPIIAPIKSRCLL---IRCPAPSDSEISTILS 203 + + + + + I P P++ IL Sbjct: 297 RIDILDSALLRPGRIDRKIEFPPPNEEARLDILK 330 >3JCO-J nrPDB Length = 405 Score = 41.0 bits (94), Expect = 9e-04, Method: Composition-based stats. Identities = 41/217 (18%), Positives = 72/217 (33%), Gaps = 44/217 (20%) Query: 5 VDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHL------------LLYGPNGTGKKTR 52 V+K + + + + +K + + P P L +LYGP GTGK Sbjct: 139 VEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLL 198 Query: 53 CMALLESIFGPGVYRLKIDVRQ--FVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQ 110 A+ + ++ Q S EL V++ + I D Sbjct: 199 ARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDE--------- 249 Query: 111 ELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMV 170 + +V+ D R ++N+ + + SKNI++IM Sbjct: 250 ---IDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGF-------------ETSKNIKIIMA 293 Query: 171 CDSMSPIIAPIKSRC----LLIRCPAPSDSEISTILS 203 + + I+ P R I P PS + + IL Sbjct: 294 TNRLD-ILDPALLRPGRIDRKIEFPPPSVAARAEILR 329 >3EIH-A nrPDB Length = 340 Score = 41.0 bits (94), Expect = 9e-04, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 56/160 (35%), Gaps = 13/160 (8%) Query: 14 NALSHNEELTNFLKSLSDQPRDLPHL-----------LLYGPNGTGKKTRCMALLESIFG 62 ++ E LK P PHL LLYGP GTGK A+ Sbjct: 36 EDVAGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGTGKSYLAKAVATEANS 95 Query: 63 PGVYRLKIDVRQFVTASNRKL--ELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQME 120 D+ + KL +L ++ I D + E E ++ Sbjct: 96 TFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFIDQVDALTGTRGEGESEASRRI 155 Query: 121 QVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEK 160 + + +G+ + + V++ A ++ +A+RR E+ Sbjct: 156 KTELLVQMNGVGNDSQGVLVLGATNIPWQLDSAIRRRFER 195 >2I3B-A nrPDB Length = 189 Score = 40.6 bits (93), Expect = 0.001, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 44/133 (33%), Gaps = 9/133 (6%) Query: 38 HLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNR----KLELNVVSSPYH 93 H+ L GP G GK T E + GV + R + L+ P Sbjct: 3 HVFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQGGRRIGFDVVTLSGTRGPLS 62 Query: 94 LEITPSDMGNNDRIVIQEL--LKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQ 151 G + V Q + L Q+ +++ + +I+E + +Q Sbjct: 63 RVGLEPPPGKRECRVGQYVVDLTSFEQLALPVLRNADCSSGPGQRVCVIDEIGKMELFSQ 122 Query: 152 ---AALRRTMEKY 161 A+R+T+ Sbjct: 123 LFIQAVRQTLSTP 135 >4CIU-A nrPDB Length = 727 Score = 40.6 bits (93), Expect = 0.001, Method: Composition-based stats. Identities = 36/279 (12%), Positives = 84/279 (30%), Gaps = 51/279 (18%) Query: 16 LSHNEELTNFLK--------SLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYR 67 + E + + L+D R + L GP G GK C AL +F Sbjct: 428 VIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAM 487 Query: 68 LKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDS 127 ++ID+ +F+ + + E G ++ Sbjct: 488 VRIDMSEFMEKHSVSRLVGAPPGYVGYE-----EGGYLTEAVRRR--------------- 527 Query: 128 KDGLAHRYKCVIINEANSLTKDAQAALRRTME---KYSKNIRLIMVCDSMSPIIAPIKSR 184 Y ++++ D L + ++ R + +++ + + + S Sbjct: 528 ------PYSVILLDAVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSD 581 Query: 185 CLLIRCPAPSDSEISTILSDVVTN----------ERIQLETKDILKRIAQASNGNLRVSL 234 + R + + ++ VV++ + + + + IA + L+ Sbjct: 582 LIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLY 641 Query: 235 LMLE----SMALNNELALKSSSPIIKPDWIIVIHKLTRK 269 LE + +++E S P + K + Sbjct: 642 KRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQ 680 Score = 31.7 bits (70), Expect = 0.43, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 23/56 (41%), Gaps = 3/56 (5%) Query: 6 DKYRPKSLNALSHNEELTNF-LKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESI 60 ++ L+ + +E ++ L + ++ P L+ G G GK L + I Sbjct: 28 ERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLI--GEPGVGKTAIVEGLAQRI 81 >5XMK-A nrPDB Length = 437 Score = 40.6 bits (93), Expect = 0.001, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 56/160 (35%), Gaps = 13/160 (8%) Query: 14 NALSHNEELTNFLKSLSDQPRDLPHL-----------LLYGPNGTGKKTRCMALLESIFG 62 ++ E LK P PHL LLYGP GTGK A+ Sbjct: 133 EDVAGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGTGKSYLAKAVATEANS 192 Query: 63 PGVYRLKIDVRQFVTASNRKL--ELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQME 120 D+ + KL +L ++ I D + E E ++ Sbjct: 193 TFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFIDQVDALTGTRGEGESEASRRI 252 Query: 121 QVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEK 160 + + +G+ + + V++ A ++ +A+RR E+ Sbjct: 253 KTELLVQMNGVGNDSQGVLVLGATNIPWQLDSAIRRRFER 292 >5VHN-D nrPDB Length = 262 Score = 39.8 bits (91), Expect = 0.002, Method: Composition-based stats. Identities = 29/197 (14%), Positives = 64/197 (32%), Gaps = 28/197 (14%) Query: 39 LLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITP 98 +L+YGP G GK A+ + + + Q P + Sbjct: 58 VLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGE----------GPRMVRDVF 107 Query: 99 SDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTM 158 N +I + ++ D Q D R ++N+ + ++ Sbjct: 108 RLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNV-------- 159 Query: 159 EKYSKNIRLIMVCDSMSPIIAPIKSRCLL---IRCPAPSDSEISTILSDVVTNERI--QL 213 N+++IM + + + L I P P + I S + + + ++ Sbjct: 160 -----NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEV 214 Query: 214 ETKDILKRIAQASNGNL 230 + +D + R + S ++ Sbjct: 215 DLEDYVARPDKISGADI 231 >3J3U-A nrPDB Length = 810 Score = 39.8 bits (91), Expect = 0.002, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 47/132 (35%), Gaps = 26/132 (19%) Query: 28 SLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNV 87 L D R + + GP G GK AL ESIFG ++ID+ ++ + Sbjct: 530 GLKDPKRPIGSFIFLGPTGVGKTELARALAESIFGDEESMIRIDMSEY---------MEK 580 Query: 88 VSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLT 147 S+ + P +G ++ + E ++ Y V+++ Sbjct: 581 HSTSRLVGSPPGYVGYDEGGQLTEKVRR-----------------KPYSVVLLDAIEKAH 623 Query: 148 KDAQAALRRTME 159 D L + +E Sbjct: 624 PDVFNILLQVLE 635 Score = 32.5 bits (72), Expect = 0.27, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 27/66 (40%), Gaps = 3/66 (4%) Query: 9 RPKSLNALSHNEELTNF-LKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYR 67 + SL+ + + ++ LS + ++ P L+ G G GK L + I V Sbjct: 175 KEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLI--GEPGVGKTAIAEGLAQQIINNEVPE 232 Query: 68 LKIDVR 73 + D R Sbjct: 233 ILRDKR 238 >4YPN-A nrPDB Length = 293 Score = 39.4 bits (90), Expect = 0.002, Method: Composition-based stats. Identities = 28/205 (13%), Positives = 57/205 (27%), Gaps = 50/205 (24%) Query: 6 DKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGV 65 D Y K + L D P L+L GP G GK + ++ S+ Sbjct: 113 DHYGLKDVKERILEYLAVRQLTQGLDVRNKAPILVLVGPPGVGKTSLGRSIARSM----- 167 Query: 66 YRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQ 125 ++ L V + + +K+V + Sbjct: 168 -----------NRKFHRISLGGVRDEAEIRGHRRTYIGAMPGKLIHAMKQVGVINP---- 212 Query: 126 DSKDGLAHRYKCVIINEANSLTK----DAQAALRRTMEKYSKNI---------------R 166 ++++E + ++ D +A+ ++ N Sbjct: 213 -----------VILLDEIDKMSSDWRGDPASAMLEVLDPEQNNTFTDHYLDVPYDLSKVF 261 Query: 167 LIMVCDSMSPIIAPIKSRCLLIRCP 191 I +++ I P+ R +I P Sbjct: 262 FITTANTLQTIPRPLLDRMEVIEIP 286 >6QEL-G nrPDB Length = 245 Score = 39.4 bits (90), Expect = 0.002, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 37/107 (34%), Gaps = 9/107 (8%) Query: 6 DKYRPKSLNALSHNEELTNFLKSLSDQ-PRDLPHLLLYGPNGTGKKTRCMALLESIFGPG 64 + YR + + ++ ++ + G GTGK A+ + G Sbjct: 72 ENYRV----ECEGQMNALSKARQYVEEFDGNIASFIFSGKPGTGKNHLAAAICNELLLRG 127 Query: 65 VYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQE 111 L I V ++A + S L +D+ N D +VI E Sbjct: 128 KSVLIITVADIMSAMKDTFRNSGTSEEQLL----NDLSNVDLLVIDE 170 >4ZPX-A nrPDB Length = 413 Score = 39.4 bits (90), Expect = 0.002, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 35/97 (36%), Gaps = 3/97 (3%) Query: 11 KSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKI 70 K ++ + E +K+ ++Q R H+LL G GTGK A+ E + + + + Sbjct: 38 KLIDQVIGQEHAVEVIKTAANQKR---HVLLIGEPGTGKSMLGQAMAELLPTETLEDILV 94 Query: 71 DVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRI 107 R + +E + + + Sbjct: 95 FPNPEDENMPRIKTVPACQGRRIVEKYREKAKSQESV 131 >5VQ9-D nrPDB Length = 432 Score = 39.4 bits (90), Expect = 0.002, Method: Composition-based stats. Identities = 29/233 (12%), Positives = 76/233 (32%), Gaps = 21/233 (9%) Query: 39 LLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITP 98 +LL+GP GTGK + C AL + + R + + + + + S ++ Sbjct: 175 VLLHGPPGTGKTSLCKALAQKLTIRLSSRYRYGQLIEINSHSLFSKWFSESGKLVTKMFQ 234 Query: 99 S-----DMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAA 153 D + V+ + ++ + ++ A R ++ + + + + + Sbjct: 235 KIQDLIDDKDALVFVLIDQVESLTAARNACRAGTEPSDAIRVVNAVLTQIDQIKRHS--- 291 Query: 154 LRRTMEKYSKNIRLIMVCDSMSPIIAPIKSRCLLIRCPAPSDSEISTILSDVVTNERIQL 213 N+ ++ + I R + + P + + E ++ Sbjct: 292 ----------NVVILTTSNITEKIDVAFVDRADIKQYIGPPSAAAIFKIYLSCLEELMKC 341 Query: 214 ETKDILKRIAQASNGNLRVSLLMLESMALNNELALKSSSPIIKPDWIIVIHKL 266 + +++ + + +E+ L L S + V+ KL Sbjct: 342 QIIYPRQQLLTLRELEM---IGFIENNVSKLSLLLNDISRKSEGLSGRVLRKL 391 >5T0C-AD nrPDB Length = 418 Score = 39.1 bits (89), Expect = 0.003, Method: Composition-based stats. Identities = 29/197 (14%), Positives = 64/197 (32%), Gaps = 28/197 (14%) Query: 39 LLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITP 98 +L+YGP G GK A+ + + + Q P + Sbjct: 202 VLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGE----------GPRMVRDVF 251 Query: 99 SDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTM 158 N +I + ++ D Q D R ++N+ + ++ Sbjct: 252 RLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNV-------- 303 Query: 159 EKYSKNIRLIMVCDSMSPIIAPIKSRCLL---IRCPAPSDSEISTILSDVVTNERI--QL 213 N+++IM + + + L I P P + I S + + + ++ Sbjct: 304 -----NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEV 358 Query: 214 ETKDILKRIAQASNGNL 230 + +D + R + S ++ Sbjct: 359 DLEDYVARPDKISGADI 375 >3PFI-A nrPDB Length = 338 Score = 39.1 bits (89), Expect = 0.003, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 20/56 (35%), Gaps = 4/56 (7%) Query: 9 RPKSLNALSHNEELTNFLKSLSDQPRD----LPHLLLYGPNGTGKKTRCMALLESI 60 RP + + E + L + L H+L GP G GK T + + Sbjct: 24 RPSNFDGYIGQESIKKNLNVFIAAAKKRNECLDHILFSGPAGLGKTTLANIISYEM 79 >6EF2-J nrPDB Length = 262 Score = 39.1 bits (89), Expect = 0.003, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 69/211 (32%), Gaps = 44/211 (20%) Query: 11 KSLNALSHNEELTNFLKSLSDQPRDLPHL------------LLYGPNGTGKKTRCMALLE 58 + + + + +K + + P P L +LYGP GTGK A+ Sbjct: 2 STYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAH 61 Query: 59 SIFGPGVYRLKIDVRQ--FVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEV 116 + ++ Q S EL V++ + I D + Sbjct: 62 HTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDE------------IDS 109 Query: 117 AQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSP 176 +V+ D R ++N+ + + SKNI++IM + + Sbjct: 110 IGSTRVEGSGGGDSEVQRTMLELLNQLDGF-------------ETSKNIKIIMATNRLD- 155 Query: 177 IIAPIKSRC----LLIRCPAPSDSEISTILS 203 I+ P R I P PS + + IL Sbjct: 156 ILDPALLRPGRIDRKIEFPPPSVAARAEILR 186 >6EF1-K nrPDB Length = 276 Score = 38.7 bits (88), Expect = 0.004, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 56/188 (29%), Gaps = 27/188 (14%) Query: 39 LLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITP 98 +LLYGP GTGK A+ S V S + + P + Sbjct: 57 VLLYGPPGTGKTMLVKAVANS---------TKAAFIRVNGSEFVHKY-LGEGPRMVRDVF 106 Query: 99 SDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTM 158 N +I + ++ D Q D R ++ + + + Sbjct: 107 RLARENAPSIIFIDEVDSIATKRFDAQTGSDREVQRILIELLTQMDGFDQ---------- 156 Query: 159 EKYSKNIRLIMVCDSMSPIIAPIKSRCLL---IRCPAPSDSEISTILSDVVTNERIQLET 215 S N+++IM + + + L I P+ D L ++ L Sbjct: 157 ---STNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRD-RRERRLIFGTIASKMSLAP 212 Query: 216 KDILKRIA 223 + L + Sbjct: 213 EADLDSLI 220 >6NYV-B nrPDB Length = 314 Score = 38.7 bits (88), Expect = 0.004, Method: Composition-based stats. Identities = 36/242 (14%), Positives = 80/242 (33%), Gaps = 33/242 (13%) Query: 15 ALSHNEELTNFLKSLSDQPRDLPHL-----------LLYGPNGTGKKTRCMALLESIFGP 63 ++ + L+ + P P L LL+GP G GK A+ Sbjct: 40 DIAGQDVAKQALQEMVILPSVRPELFTGLRAPAKGLLLFGPPGNGKTLLARAVATECSAT 99 Query: 64 GVYRLKIDVRQFVTASNRKLELNVVSSPYHLE-----ITPSDMGNNDRIVIQELLKEVAQ 118 + + KL + + H++ I D ++R + + Sbjct: 100 FLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSSEHEASRRLK 159 Query: 119 MEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEK-----YSKNIRLIMVCDS 173 E + D G + V++ N + +AALRR ++ + R +++ Sbjct: 160 TEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDEQTRELLLNRL 219 Query: 174 MSPIIAPIKSRCLLIRCPAPSDSEISTILSDVVTN-----------ERIQLETKDILKRI 222 + +P+ + L R +D + L+ + + E+++ ++ I Sbjct: 220 LQKQGSPLDTEALR-RLAKITDGYSGSDLTALAKDAALEPIRELNVEQVKCLDISAMRAI 278 Query: 223 AQ 224 + Sbjct: 279 TE 280 >5D4W-A nrPDB Length = 926 Score = 38.7 bits (88), Expect = 0.004, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 7/67 (10%) Query: 16 LSHNEELTNFL-------KSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRL 68 + +E + +S P P L GP+GTGK AL E +F + Sbjct: 600 VVGQKEAVQSVSNAIRLQRSGLSNPNQPPSFLFCGPSGTGKTLLTKALAEFLFDDPKSMI 659 Query: 69 KIDVRQF 75 + D+ ++ Sbjct: 660 RFDMSEY 666 Score = 36.0 bits (81), Expect = 0.025, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 36/104 (34%), Gaps = 10/104 (9%) Query: 9 RPKSLNALSHNEELTNF-LKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYR 67 R ++ + EE ++ LS + ++ P L+ G G GK T L + I V Sbjct: 190 REGKIDPVIGREEEIRRVIRILSRRTKNNPVLI--GEPGVGKTTIVEGLAQRIVNADVPD 247 Query: 68 -------LKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNN 104 L +DV V S + E EI S Sbjct: 248 NLAACKLLSLDVGALVAGSKYRGEFEERMKGVLKEIQESKETII 291 >3M6A-A nrPDB Length = 543 Score = 38.3 bits (87), Expect = 0.005, Method: Composition-based stats. Identities = 40/216 (18%), Positives = 84/216 (38%), Gaps = 37/216 (17%) Query: 5 VDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPG 64 ++K + + L L+ + LT LK P L L GP G GK + ++ +S+ Sbjct: 86 LEKVKERILEYLAVQK-LTKSLKG--------PILCLAGPPGVGKTSLAKSIAKSL---- 132 Query: 65 VYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDF 124 R+FV ++ L V + I + +K+ ++ V Sbjct: 133 -------GRKFV-----RISLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAGKLNPVFL 180 Query: 125 QDSKDGLAHRYK-------CVIIN-EANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSP 176 D D ++ ++ +++ E NS D + T + + I ++++ Sbjct: 181 LDEIDKMSSDFRGDPSSAMLEVLDPEQNSSFSD--HYIEETFDL--SKVLFIATANNLAT 236 Query: 177 IIAPIKSRCLLIRCPAPSDSEISTILSDVVTNERIQ 212 I P++ R +I ++ E I+ D + ++I+ Sbjct: 237 IPGPLRDRMEIINIAGYTEIEKLEIVKDHLLPKQIK 272 >6CHS-H nrPDB Length = 819 Score = 38.3 bits (87), Expect = 0.006, Method: Composition-based stats. Identities = 50/281 (17%), Positives = 91/281 (32%), Gaps = 61/281 (21%) Query: 14 NALSHNEELTNFLKSLSDQPRDLPH------------LLLYGPNGTGKKTRCMALLESI- 60 + E++ LK P D P +L YGP GTGK A+ Sbjct: 494 EDIGGLEQVKQELKEQVQYPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLAKAVANECA 553 Query: 61 ---------------FGPGVYRLKIDVRQFVTASNRKL---ELNVVSSPYHLEITPSDMG 102 FG ++ + A+ + EL+ ++ I D G Sbjct: 554 ANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSIAKARGGSI--GDAG 611 Query: 103 NNDRIVIQELLKEV-------------AQMEQVDFQDSKDGLAHRYKCVII---NEANSL 146 V+ +LL E+ A + + + + +EA L Sbjct: 612 GASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDPALCRPGRLDQLIYVPLPDEAGRL 671 Query: 147 TKDAQAALRRTMEKYSKNIRLIMVCDSMSPI----IAPIKSRCLLIRCPAPSDSEISTIL 202 + +A LR+T SK++ L + +A I R + + +EI Sbjct: 672 SI-LKAQLRKT--PVSKDVDLAYIASKTHGFSGADLAFITQRAVKLAIKESIAAEIERQK 728 Query: 203 SDVVTNERIQLET-----KDILKRIAQASNGNLRVSLLMLE 238 + E + +E ++ KR + + + R S+ +E Sbjct: 729 AREAAGEDVNMEDDEDPVPELTKRHFEEAMRDARRSVSDVE 769 Score = 35.6 bits (80), Expect = 0.037, Method: Composition-based stats. Identities = 39/238 (16%), Positives = 74/238 (31%), Gaps = 57/238 (23%) Query: 39 LLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITP 98 +LLYGP GTGK A+ +++ P + Sbjct: 257 VLLYGPPGTGKTLMARAVANE---------------------TGAFFFLINGPEIMSKMA 295 Query: 99 SDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLT----------- 147 + +N R +E K + I+E +S+ Sbjct: 296 GESESNLRKAFEEAEKNSPA------------------IIFIDEIDSIAPKREKTNGEVE 337 Query: 148 KDAQAALRRTME-KYSKNIRLIMVCDSMSPIIAPIKSRCLLI----RCPAPSDSEISTIL 202 + + L M+ +++ ++M + I P R P + IL Sbjct: 338 RRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEIL 397 Query: 203 SDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESMALNNELALKSSSPIIKPDWI 260 + + ++L L++IA ++G + L L S A ++ K + D I Sbjct: 398 Q--IHTKNMKLADDVDLEQIAAETHGYVGSDLAALCSEAAMQQIREKMDLIDLDEDTI 453 >5ZQM-A nrPDB Length = 309 Score = 37.9 bits (86), Expect = 0.006, Method: Composition-based stats. Identities = 42/304 (13%), Positives = 88/304 (28%), Gaps = 52/304 (17%) Query: 14 NALSHNEELTNFLKSLSDQPRDLPH-----------LLLYGPNGTGKKTRCMALLESIFG 62 + ++ E LK P +P +L+ GP GTGK A+ Sbjct: 29 DDIADLVEAKKLLKEAVVLPMWMPEFFKGIRRPWKGVLMVGPPGTGKTLLAKAVATECKT 88 Query: 63 PGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQV 122 + + KL + + D I + E Sbjct: 89 TFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTSE------- 141 Query: 123 DFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIK 182 + + R K ++ + + + ++ + SK + ++ + I ++ Sbjct: 142 -----EHEASRRVKAELLVQMDGVGGTSEN------DDPSKMVMVLAATNFPWDIDEALR 190 Query: 183 SRC-LLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNG------------- 228 R I P PS +L ++ ++L L IA+ G Sbjct: 191 RRLEKRIYIPLPSAKGREELLR--ISLRELELADDVDLASIAENMEGYSGADITNVCRDA 248 Query: 229 ---NLRVSLLMLESMALNNELALKSSSPIIKPDWIIVIHKLTRKIVKERSVNSLIECRAV 285 +R + L + N + P D+ + +K+ K S + Sbjct: 249 SLMAMRRRIEGLTPEEIRNLSKEEMHMPTTMEDFEMA----LKKVSKSVSAADIERYEKW 304 Query: 286 LYDL 289 +++ Sbjct: 305 IFEF 308 >5OFO-C nrPDB Length = 871 Score = 37.9 bits (86), Expect = 0.006, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 28/70 (40%), Gaps = 8/70 (11%) Query: 16 LSHNEELTNFLK--------SLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYR 67 + E + + L+D R + L GP G GK C AL +F Sbjct: 574 VIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAM 633 Query: 68 LKIDVRQFVT 77 ++ID+ +F+ Sbjct: 634 VRIDMSEFME 643 Score = 31.7 bits (70), Expect = 0.44, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 23/56 (41%), Gaps = 3/56 (5%) Query: 6 DKYRPKSLNALSHNEELTNF-LKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESI 60 ++ L+ + +E ++ L + ++ P L+ G G GK L + I Sbjct: 174 ERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLI--GEPGVGKTAIVEGLAQRI 227 >6BLB-A nrPDB Length = 355 Score = 37.9 bits (86), Expect = 0.007, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 21/56 (37%), Gaps = 4/56 (7%) Query: 9 RPKSLNALSHNEELTNFLKSLSDQPRD----LPHLLLYGPNGTGKKTRCMALLESI 60 RP L + ++ R L H L++GP G GK T + + + Sbjct: 28 RPLKLADYIGQPSVREQMELFIHAARGRQEALDHTLIFGPPGLGKTTLANIIAQEM 83 >5WVI-K nrPDB Length = 428 Score = 37.9 bits (86), Expect = 0.007, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 56/188 (29%), Gaps = 27/188 (14%) Query: 39 LLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITP 98 +LLYGP GTGK A+ S V S + + P + Sbjct: 209 VLLYGPPGTGKTMLVKAVANS---------TKAAFIRVNGSEFVHKY-LGEGPRMVRDVF 258 Query: 99 SDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTM 158 N +I + ++ D Q D R ++ + + + Sbjct: 259 RLARENAPSIIFIDEVDSIATKRFDAQTGSDREVQRILIELLTQMDGFDQ---------- 308 Query: 159 EKYSKNIRLIMVCDSMSPIIAPIKSRCLL---IRCPAPSDSEISTILSDVVTNERIQLET 215 S N+++IM + + + L I P+ D L ++ L Sbjct: 309 ---STNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRD-RRERRLIFGTIASKMSLAP 364 Query: 216 KDILKRIA 223 + L + Sbjct: 365 EADLDSLI 372 >3WHK-A nrPDB Length = 270 Score = 37.5 bits (85), Expect = 0.008, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 60/162 (37%), Gaps = 27/162 (16%) Query: 9 RPK-SLNALSHNEELTNFLKSLSDQPRDLPHL------------LLYGPNGTGKKTRCMA 55 RP + N + ++ L+ + P P L LLYGP G GK A Sbjct: 11 RPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKA 70 Query: 56 LLESIFGPGVYRLKIDVRQFVTASNRKL-----ELNVVSSPYHLEITP---------SDM 101 + + + + ++ + +L EL +P + I + Sbjct: 71 IAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRLDET 130 Query: 102 GNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEA 143 +R V + L++ +A+M+ D + + +A + I++ A Sbjct: 131 TGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPA 172 >5UBV-A nrPDB Length = 246 Score = 37.5 bits (85), Expect = 0.009, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 80/254 (31%), Gaps = 63/254 (24%) Query: 20 EELTNFLK---SLSDQPRDLPH-LLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQF 75 +EL FL+ S+ LP +LL GP GTGK A+ Sbjct: 19 QELVEFLRNPEKFSNLGGKLPKGVLLVGPPGTGKTLLARAVAGE---------------- 62 Query: 76 VTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRY 135 + ++ S+ V + ++E+ + Sbjct: 63 -------------AGVPFFYMSGSEFDEIYVGVGAKRVRELFNAAKAKAPS--------- 100 Query: 136 KCVIINEANSL-----TKDAQ------AALRRTMEKYSKNIRLIM--VCDSMSPIIAPIK 182 V I+E +++ ++DA L M+ +++N +I+ + + + Sbjct: 101 -IVFIDELDAIGGRRNSRDATYVRQTLNQLLTEMDGFAQNSGVIILGATNFPESLDKAL- 158 Query: 183 SRCLLI----RCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLE 238 +R P IL I++ + + IA ++G L + Sbjct: 159 TRPGRFDRHVHVSLPDVRGRIAILKHHAKK--IKIGSDVNIAAIAARTSGLSGAELENIV 216 Query: 239 SMALNNELALKSSS 252 + A + K+ + Sbjct: 217 NQAAVHASKEKAKA 230 >3PXI-A nrPDB Length = 758 Score = 37.1 bits (84), Expect = 0.011, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 25/50 (50%) Query: 28 SLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVT 77 L D R + + GP G GK AL ESIFG ++ID+ +++ Sbjct: 513 GLKDPKRPIGSFIFLGPTGVGKTELARALAESIFGDEESMIRIDMSEYME 562 Score = 32.1 bits (71), Expect = 0.34, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 27/66 (40%), Gaps = 3/66 (4%) Query: 9 RPKSLNALSHNEELTNF-LKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYR 67 + SL+ + + ++ LS + ++ P L+ G G GK L + I V Sbjct: 175 KEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLI--GEPGVGKTAIAEGLAQQIINNEVPE 232 Query: 68 LKIDVR 73 + D R Sbjct: 233 ILRDKR 238 >2QBY-A nrPDB Length = 386 Score = 37.1 bits (84), Expect = 0.012, Method: Composition-based stats. Identities = 40/288 (13%), Positives = 100/288 (34%), Gaps = 47/288 (16%) Query: 14 NALSHNEELTNFLKSLS------DQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYR 67 + L H E+ + S+ ++P ++ +YG GTGK +L + + + Sbjct: 20 DELPHREDQIRKIASILAPLYREEKPNNI---FIYGLTGTGKTAVVKFVLSKLHKKFLGK 76 Query: 68 LKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDS 127 K + +N + + + D ++ ++ E Sbjct: 77 FK------------HVYINTRQIDTPYRVLADLLESLD---VKVPFTGLSIAELYRRLVK 121 Query: 128 KDGLAHRYKCVIINEANSLTKDAQAAL-----RRTMEKYSKNIRLIMVCDSM------SP 176 ++++E ++ K + R E I I + + + P Sbjct: 122 AVRDYGSQVVIVLDEIDAFVKKYNDDILYKLSRINSEVNKSKISFIGITNDVKFVDLLDP 181 Query: 177 IIAPIKSRCLLIRCPAPSDSEISTILSDVVTNE-RIQLETKDILKRIAQASN---GNLRV 232 + S +I P + E+ IL+ + + +++K A + G+ R Sbjct: 182 RVKSSLSEEEII-FPPYNAEELEDILTKRAQMAFKPGVLPDNVIKLCAALAAREHGDARR 240 Query: 233 SLLMLESMALNNELALKSSSPIIKPDWIIVIHKLTRKIVKERSVNSLI 280 +L +L ++ E+A + +K +++ + ++ ++ V +I Sbjct: 241 ALDLLR---VSGEIAERMKDTKVKEEYVY----MAKEEIERDRVRDII 281 >3D8B-A nrPDB Length = 357 Score = 37.1 bits (84), Expect = 0.012, Method: Composition-based stats. Identities = 37/288 (12%), Positives = 86/288 (29%), Gaps = 42/288 (14%) Query: 10 PKSLNALSHNEELTNFLKSLSDQPRDLPHL-----------LLYGPNGTGKKTRCMALLE 58 P + ++ E +K + P P + LL+GP GTGK + Sbjct: 80 PVNWEDIAGVEFAKATIKEIVVWPMLRPDIFTGLRGPPKGILLFGPPGTGKTLIGKCIAS 139 Query: 59 SIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQ 118 + K+ + + + + D ++ Q Sbjct: 140 QSGATFFSISASSLTSKWVGEGEKMVRALFAVARCQQPAVIFIDEIDSLLSQR------- 192 Query: 119 MEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPII 178 D + + R K + + + T ++ + ++ + I Sbjct: 193 ------GDGEHESSRRIKTEFLVQLDGATTSSEDRIL-----------VVGATNRPQEID 235 Query: 179 APIKSR-CLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLML 237 + R + P P S I+ ++++ E+ L ++I + + Q+ + + Sbjct: 236 EAARRRLVKRLYIPLPEASARKQIVINLMSKEQCCLSEEEIEQIVQQSDAFSGADMTQLC 295 Query: 238 ESMALNNELALK------SSSPIIKPDWIIVIHKLTRKIVKERSVNSL 279 +L +L+ + ++P I R + S L Sbjct: 296 REASLGPIRSLQTADIATITPDQVRPIAYIDFENAFRTVRPSVSPKDL 343 >5U1D-A nrPDB Length = 748 Score = 36.7 bits (83), Expect = 0.015, Method: Composition-based stats. Identities = 47/236 (19%), Positives = 87/236 (36%), Gaps = 19/236 (8%) Query: 29 LSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVV 88 + +P ++ L+ GPNG+GK T ALL++++ P +L +D + +R L V Sbjct: 526 FTLRPGEVTALV--GPNGSGKSTVA-ALLQNLYQPTGGQLLLDGKPLPQYEHRYLHRQVA 582 Query: 89 SSPYHLEI-TPSDMGNNDRIVIQELLKE--VAQMEQVDFQDSKDGLAHRYKCVIINEANS 145 + ++ S N + Q+ E A + GL Y + +EA S Sbjct: 583 AVGQEPQVFGRSLQENIAYGLTQKPTMEEITAAAVKSGAHSFISGLPQGYDTEV-DEAGS 641 Query: 146 LTKDAQA---ALRRTMEKYSKNIRLIMVCDSMSPIIAPIKSRCLLIRCPAPSDSEISTIL 202 Q AL R + + K LI+ D+ S + A + + + +P S + Sbjct: 642 QLSGGQRQAVALARALIR--KPCVLILD-DATSALDANSQLQVEQLLYESP--ERYSRSV 696 Query: 203 SDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESMALNNELALKSSSPIIKPD 258 + + + + I G +R + M +P P+ Sbjct: 697 LLITQHLSLVEQADH----ILFLEGGAIREGGTHQQLMEKKGCYWAMVQAPADAPE 748 >1JJ7-A nrPDB Length = 260 Score = 36.7 bits (83), Expect = 0.015, Method: Composition-based stats. Identities = 47/236 (19%), Positives = 87/236 (36%), Gaps = 19/236 (8%) Query: 29 LSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVV 88 + +P ++ L+ GPNG+GK T ALL++++ P +L +D + +R L V Sbjct: 38 FTLRPGEVTALV--GPNGSGKSTVA-ALLQNLYQPTGGQLLLDGKPLPQYEHRYLHRQVA 94 Query: 89 SSPYHLEI-TPSDMGNNDRIVIQELLKE--VAQMEQVDFQDSKDGLAHRYKCVIINEANS 145 + ++ S N + Q+ E A + GL Y + +EA S Sbjct: 95 AVGQEPQVFGRSLQENIAYGLTQKPTMEEITAAAVKSGAHSFISGLPQGYDTEV-DEAGS 153 Query: 146 LTKDAQA---ALRRTMEKYSKNIRLIMVCDSMSPIIAPIKSRCLLIRCPAPSDSEISTIL 202 Q AL R + + K LI+ D+ S + A + + + +P S + Sbjct: 154 QLSGGQRQAVALARALIR--KPCVLILD-DATSALDANSQLQVEQLLYESP--ERYSRSV 208 Query: 203 SDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESMALNNELALKSSSPIIKPD 258 + + + + I G +R + M +P P+ Sbjct: 209 LLITQHLSLVEQADH----ILFLEGGAIREGGTHQQLMEKKGCYWAMVQAPADAPE 260 >1XWI-A nrPDB Length = 322 Score = 36.7 bits (83), Expect = 0.015, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 58/167 (34%), Gaps = 15/167 (8%) Query: 9 RPKS-LNALSHNEELTNFLKSLSDQPRDLPHL-----------LLYGPNGTGKKTRCMAL 56 RP + ++ E LK P PHL LL+GP GTGK A+ Sbjct: 6 RPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV 65 Query: 57 LESIFGPGVYR-LKIDVRQFVTASNRKL--ELNVVSSPYHLEITPSDMGNNDRIVIQELL 113 + D+ + KL L ++ I D ++ E Sbjct: 66 ATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSENE 125 Query: 114 KEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEK 160 E A+ + +F G+ +++ A ++ +A+RR EK Sbjct: 126 SEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRRRFEK 172 >3H4M-A nrPDB Length = 285 Score = 36.7 bits (83), Expect = 0.017, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 70/209 (33%), Gaps = 60/209 (28%) Query: 39 LLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITP 98 +LLYGP GTGK A+ E Sbjct: 54 ILLYGPPGTGKTLLAKAVA------------------------------------TETNA 77 Query: 99 SDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAAL---- 154 + + ++++ + E A + + F+ +K+ + I+E +++ AL Sbjct: 78 TFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPS---IIFIDEIDAIAAKRTDALTGGD 134 Query: 155 ----RRTMEKYSK--------NIRLIMVCDSMSPIIAPIKSRC---LLIRCPAPSDSEIS 199 R M+ ++ ++++I + + I +I PAP + Sbjct: 135 REVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRL 194 Query: 200 TILSDVVTNERIQLETKDILKRIAQASNG 228 IL + ++ L L+ IA+ + G Sbjct: 195 EILK--IHTRKMNLAEDVNLEEIAKMTEG 221 >6MSK-B nrPDB Length = 440 Score = 36.4 bits (82), Expect = 0.019, Method: Composition-based stats. Identities = 31/230 (13%), Positives = 70/230 (30%), Gaps = 70/230 (30%) Query: 5 VDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPH------------LLLYGPNGTGKKTR 52 V+K ++ + + +K + P P ++LYGP GTGK Sbjct: 176 VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLL 235 Query: 53 CMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQEL 112 A+ +S L + S++ +L Sbjct: 236 AKAVANQ-----------------------------TSATFLRVVGSELIQKYLGDGPKL 266 Query: 113 LKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSL-------TKDAQAALRRTMEKY---- 161 ++E+ ++ + V I+E +++ + ++RTM + Sbjct: 267 VRELFRVAEEHAPS----------IVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQL 316 Query: 162 -----SKNIRLIMVCDSMSPIIAPIKSRCLL---IRCPAPSDSEISTILS 203 ++++IM + + + + + I P P + I Sbjct: 317 DGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQ 366 >2ZAO-A nrPDB Length = 444 Score = 36.4 bits (82), Expect = 0.019, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 58/167 (34%), Gaps = 15/167 (8%) Query: 9 RPKS-LNALSHNEELTNFLKSLSDQPRDLPHL-----------LLYGPNGTGKKTRCMAL 56 RP + ++ E LK P PHL LL+GP GTGK A+ Sbjct: 128 RPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV 187 Query: 57 LESIFGPGVYR-LKIDVRQFVTASNRKL--ELNVVSSPYHLEITPSDMGNNDRIVIQELL 113 + D+ + KL L ++ I D ++ E Sbjct: 188 ATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSENE 247 Query: 114 KEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEK 160 E A+ + +F G+ +++ A ++ +A+RR EK Sbjct: 248 SEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRRRFEK 294 >5VHO-B nrPDB Length = 267 Score = 36.4 bits (82), Expect = 0.020, Method: Composition-based stats. Identities = 31/216 (14%), Positives = 65/216 (30%), Gaps = 42/216 (19%) Query: 5 VDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPH------------LLLYGPNGTGKKTR 52 V+K ++ + + +K + P P ++LYGP GTGK Sbjct: 10 VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLL 69 Query: 53 CMALLESIFGPGVYRLKIDVRQFVTASNRKL--ELNVVSSPYHLEITPSDMGNNDRIVIQ 110 A+ + + ++ Q KL EL V+ + I D Sbjct: 70 AKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDE--------- 120 Query: 111 ELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMV 170 + ++ D + R ++N+ + ++++IM Sbjct: 121 ---IDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS-------------RGDVKVIMA 164 Query: 171 CDSMSPIIAPIKSRCLL---IRCPAPSDSEISTILS 203 + + + + + I P P + I Sbjct: 165 TNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQ 200 >5VHF-B nrPDB Length = 340 Score = 36.4 bits (82), Expect = 0.021, Method: Composition-based stats. Identities = 31/216 (14%), Positives = 65/216 (30%), Gaps = 42/216 (19%) Query: 5 VDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPH------------LLLYGPNGTGKKTR 52 V+K ++ + + +K + P P ++LYGP GTGK Sbjct: 84 VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLL 143 Query: 53 CMALLESIFGPGVYRLKIDVRQFVTASNRKL--ELNVVSSPYHLEITPSDMGNNDRIVIQ 110 A+ + + ++ Q KL EL V+ + I D Sbjct: 144 AKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDE--------- 194 Query: 111 ELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMV 170 + ++ D + R ++N+ + ++++IM Sbjct: 195 ---IDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS-------------RGDVKVIMA 238 Query: 171 CDSMSPIIAPIKSRCLL---IRCPAPSDSEISTILS 203 + + + + + I P P + I Sbjct: 239 TNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQ 274 >5VFP-B nrPDB Length = 389 Score = 36.0 bits (81), Expect = 0.024, Method: Composition-based stats. Identities = 31/216 (14%), Positives = 65/216 (30%), Gaps = 42/216 (19%) Query: 5 VDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPH------------LLLYGPNGTGKKTR 52 V+K ++ + + +K + P P ++LYGP GTGK Sbjct: 125 VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLL 184 Query: 53 CMALLESIFGPGVYRLKIDVRQFVTASNRKL--ELNVVSSPYHLEITPSDMGNNDRIVIQ 110 A+ + + ++ Q KL EL V+ + I D Sbjct: 185 AKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDE--------- 235 Query: 111 ELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMV 170 + ++ D + R ++N+ + ++++IM Sbjct: 236 ---IDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS-------------RGDVKVIMA 279 Query: 171 CDSMSPIIAPIKSRCLL---IRCPAPSDSEISTILS 203 + + + + + I P P + I Sbjct: 280 TNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQ 315 >4XGC-A nrPDB Length = 393 Score = 36.0 bits (81), Expect = 0.029, Method: Composition-based stats. Identities = 32/270 (11%), Positives = 91/270 (33%), Gaps = 29/270 (10%) Query: 39 LLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITP 98 + + G GTGK ++ ++ + +Q + LE+N + + Sbjct: 63 MYVSGVPGTGKTATVTGVIRTL--------QRMAKQNELPAFEYLEINGMRLTEPRQAYV 114 Query: 99 SDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTM 158 + ++ + ++++E + L Q + + Sbjct: 115 QIYKQLTGKTVSWEQAHALLEKRFTTPAPRRVTT----VLLVDELDILCNRRQDVVYNLL 170 Query: 159 EKYSKNIRLIMVCDSMSPIIAP-------IKSR--CLLIRCPAPSDSEISTILS-DVVTN 208 + +K+ ++V + + P + SR + S ++ I++ + + Sbjct: 171 DWPTKSAAKLVVVTIANTMDLPERLLMGKVTSRLGLTRLTFQPYSHKQLQEIVTARLGGS 230 Query: 209 ERIQLETKDILKRIAQASNGNLRVSLLMLESMALNNELALKSSSPIIKPDWIIVIHKLTR 268 E + E ++ R A +G+ R +L + + A +K ++ + + Sbjct: 231 ETFKGEAVQLVARKVAAVSGDARRALDICRRATEIADTA------AVKCVTMLHVQQALA 284 Query: 269 KIVKERSVNSLIECRAVLYDLLAHCIPANI 298 +++ V ++ C + + I A + Sbjct: 285 EMIASAKVQAIRNCSR-MEQIFLQAIAAEV 313 >5Z6Q-A nrPDB Length = 392 Score = 35.6 bits (80), Expect = 0.030, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 56/163 (34%), Gaps = 15/163 (9%) Query: 13 LNALSHNEELTNFLKSLSDQPRDLPHL-----------LLYGPNGTGKKTRCMALLESIF 61 + ++ + L+ + P P L LL+GP G GK A+ Sbjct: 117 FDDIAGQDLAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESN 176 Query: 62 GPGVYRLKIDVRQFVTASNRKL--ELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQM 119 + KL L V+ I D ++ +E + ++ Sbjct: 177 ATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRR 236 Query: 120 EQVDFQDSKDGL--AHRYKCVIINEANSLTKDAQAALRRTMEK 160 + +F DG+ A + +++ N + +A LRR +++ Sbjct: 237 LKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFIKR 279 >6HE4-H nrPDB Length = 267 Score = 35.6 bits (80), Expect = 0.030, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 46/119 (38%), Gaps = 14/119 (11%) Query: 39 LLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKL-----ELNVVSSPYH 93 +LLYGP GTGK A+ + + + Q +L +L +P Sbjct: 56 VLLYGPPGTGKTLLAKAVANQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKEKAPSI 115 Query: 94 LEITPSD---------MGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEA 143 + I D + DR V + +++ +A+++ D + + + I++ A Sbjct: 116 IFIDELDAIAARRTNSDTSGDREVQRTMMQLLAELDGFDPRGDVKVIGATNRIDILDPA 174 >6GEJ-U nrPDB Length = 471 Score = 35.6 bits (80), Expect = 0.037, Method: Composition-based stats. Identities = 29/187 (15%), Positives = 70/187 (37%), Gaps = 19/187 (10%) Query: 77 TASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYK 136 T S ++++ + L + D G V ++ +VA+ ++ + G Sbjct: 238 TVSLHEIDVINSRTQGFLALFTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPG------ 291 Query: 137 CVIINEANSLTKDAQAALRRTME---------KYSKNIRLIMVCDS--MSPIIAPIKSRC 185 + I+E + L + + + R +E ++ + + + + R Sbjct: 292 VLFIDEVHMLDIECFSFINRALEDEFAPIVMMATNRGVSKTRGTNYKSPHGLPLDLLDRS 351 Query: 186 LLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQAS-NGNLRVSLLMLESMALNN 244 ++I + ++ EI TILS E ++L + D L + + +LR S ++ Sbjct: 352 IIITTKSYNEQEIKTILSIRAQEEEVELSS-DALDLLTKTGVETSLRYSSNLISVAQQIA 410 Query: 245 ELALKSS 251 ++ Sbjct: 411 MKRKNNT 417 >2R44-A nrPDB Length = 331 Score = 35.2 bits (79), Expect = 0.039, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 40/131 (30%), Gaps = 13/131 (9%) Query: 16 LSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESI--------FGPGVYR 67 + + + N L H+LL G G K L +++ F P + Sbjct: 29 VVGQKYMINRLLIGICTGG---HILLEGVPGLAKTLSVNTLAKTMDLDFHRIQFTPDLLP 85 Query: 68 LKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDS 127 + K V P +D N +Q L E Q +QV D+ Sbjct: 86 SDLIGTMIYN--QHKGNFEVKKGPVFSNFILADEVNRSPAKVQSALLECMQEKQVTIGDT 143 Query: 128 KDGLAHRYKCV 138 L + + + Sbjct: 144 TYPLDNPFLVL 154 >6HE9-H nrPDB Length = 390 Score = 35.2 bits (79), Expect = 0.039, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 46/119 (38%), Gaps = 14/119 (11%) Query: 39 LLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKL-----ELNVVSSPYH 93 +LLYGP GTGK A+ + + + Q +L +L +P Sbjct: 170 VLLYGPPGTGKTLLAKAVANQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKEKAPSI 229 Query: 94 LEITPSD---------MGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEA 143 + I D + DR V + +++ +A+++ D + + + I++ A Sbjct: 230 IFIDELDAIAARRTNSDTSGDREVQRTMMQLLAELDGFDPRGDVKVIGATNRIDILDPA 288 >4LJ8-A nrPDB Length = 339 Score = 35.2 bits (79), Expect = 0.039, Method: Composition-based stats. Identities = 25/182 (13%), Positives = 51/182 (28%), Gaps = 45/182 (24%) Query: 16 LSHNEELTNFLK--------SLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYR 67 + +E + L D R + L GP G GK L ++F Sbjct: 45 VVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAM 104 Query: 68 LKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDS 127 ++ID+ +++ + E Q + Sbjct: 105 IQIDMTEYMEKHAVSRLIGAPPGYVGYEE--------------------------GGQLT 138 Query: 128 KDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYS-----------KNIRLIMVCDSMSP 176 + Y ++ +E D L + ++ +N +I+ + SP Sbjct: 139 EAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSHGRTVDFRNTVIILTSNLGSP 198 Query: 177 II 178 +I Sbjct: 199 LI 200 >6AZ0-A nrPDB Length = 439 Score = 35.2 bits (79), Expect = 0.047, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 4/44 (9%) Query: 20 EELTNFLK---SLSDQPRDLPH-LLLYGPNGTGKKTRCMALLES 59 EE+ +FLK LP +LL GP GTGK A Sbjct: 16 EEIVDFLKDPTKYESLGGKLPKGVLLTGPPGTGKTLLARATAGE 59 >2CE7-A nrPDB Length = 476 Score = 35.2 bits (79), Expect = 0.049, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 26/68 (38%), Gaps = 16/68 (23%) Query: 8 YRPK-----SLNALSHNEELTNFLKSLSDQPRD----------LPH-LLLYGPNGTGKKT 51 Y+P + + EE LK + + +D +P +LL GP GTGK Sbjct: 5 YKPSGNKRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTL 64 Query: 52 RCMALLES 59 A+ Sbjct: 65 LARAVAGE 72 >5V8F-9 nrPDB Length = 513 Score = 34.8 bits (78), Expect = 0.058, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 57/171 (33%), Gaps = 17/171 (9%) Query: 20 EELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFV-TA 78 E++ NFL + R L + GP GTGK + ++ F L + V Sbjct: 86 EQVMNFLAKAISEHRS-DSLYITGPPGTGKTAQLDMIIRQKFQSLPLSLSTPRSKDVLRH 144 Query: 79 SNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCV 138 +N L+ + + + + I + E + D +G + K Sbjct: 145 TNPNLQNLSWFELPDGRLESVAVTSINCISLGEPSSIF--QKIFDSFQDLNGPTLQIK-- 200 Query: 139 IINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKSRCLLIR 189 L++ +E Y K ++V D M ++ S +R Sbjct: 201 -----------NMQHLQKFLEPYHKKTTFVVVLDEMDRLLHANTSETQSVR 240 >1QVR-A nrPDB Length = 854 Score = 34.4 bits (77), Expect = 0.075, Method: Composition-based stats. Identities = 25/182 (13%), Positives = 51/182 (28%), Gaps = 45/182 (24%) Query: 16 LSHNEELTNFLK--------SLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYR 67 + +E + L D R + L GP G GK L ++F Sbjct: 560 VVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAM 619 Query: 68 LKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDS 127 ++ID+ +++ + E Q + Sbjct: 620 IRIDMTEYMEKHAVSRLIGAPPGYVGYEE--------------------------GGQLT 653 Query: 128 KDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYS-----------KNIRLIMVCDSMSP 176 + Y ++ +E D L + ++ +N +I+ + SP Sbjct: 654 EAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSHGRTVDFRNTVIILTSNLGSP 713 Query: 177 II 178 +I Sbjct: 714 LI 715 Score = 32.5 bits (72), Expect = 0.28, Method: Composition-based stats. Identities = 39/268 (14%), Positives = 84/268 (31%), Gaps = 52/268 (19%) Query: 13 LNALSHNEELTNFLKSLSDQ-PRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKID 71 L+ + +E + + + ++ P L+ G G GK L + I V Sbjct: 169 LDPVIGRDEEIRRVIQILLRRTKNNPVLI--GEPGVGKTAIVEGLAQRIVKGDVPEGLKG 226 Query: 72 VRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGL 131 R +VS + + ++ +++EV Q + Sbjct: 227 KR-------------IVSLQMGSLLAGAKYRGEFEERLKAVIQEVVQSQ----------- 262 Query: 132 AHRYKCVIINEANS--------LTKDAQAALRRTMEKYSKNIRLIMVCD-SMSPIIA--- 179 + I+E ++ DA L+ + + +RLI I Sbjct: 263 --GEVILFIDELHTVVGAGKAEGAVDAGNMLKPALAR--GELRLIGATTLDEYREIEKDP 318 Query: 180 PIKSRCLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLR-------- 231 ++ R + P+ E +IL + + + I A+ + R Sbjct: 319 ALERRFQPVYVDEPTVEETISILRGLKEKYEVHHGVRISDSAIIAAATLSHRYITERRLP 378 Query: 232 -VSLLMLESMALNNELALKSSSPIIKPD 258 ++ +++ A +AL+S+ I Sbjct: 379 DKAIDLIDEAAARLRMALESAPEEIDAL 406 >6EMW-E nrPDB Length = 181 Score = 34.4 bits (77), Expect = 0.076, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 3/63 (4%) Query: 12 SLNALSHNE-ELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKI 70 +L+ + + E+T ++ LS + ++ P L+ G G GK L ++I V Sbjct: 17 TLDPVIGRDKEITRVIEVLSRRTKNNPVLI--GEPGVGKTAIAEGLAQAIVNNEVPETLK 74 Query: 71 DVR 73 D R Sbjct: 75 DKR 77 >6QI8-A nrPDB Length = 456 Score = 34.4 bits (77), Expect = 0.078, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 14/22 (63%) Query: 39 LLLYGPNGTGKKTRCMALLESI 60 +LL GP GTGK +A+ + + Sbjct: 66 VLLAGPPGTGKTALALAIAQEL 87 Score = 32.1 bits (71), Expect = 0.39, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 50/128 (39%), Gaps = 14/128 (10%) Query: 137 CVIINEANSLTKDAQAALRRTMEK-------YSKNIRLIMV-----CDSMSPIIAPIKSR 184 + ++E + L + L R +E ++ N ++ S I + R Sbjct: 298 VLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDR 357 Query: 185 CLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQA-SNGNLRVSLLMLESMALN 243 ++IR + E+ I+ E I + +++ L + + + LR S+ +L L Sbjct: 358 VMIIRTMLYTPQEMKQIIKIRAQTEGINI-SEEALNHLGEIGTKTTLRYSVQLLTPANLL 416 Query: 244 NELALKSS 251 ++ K S Sbjct: 417 AKINGKDS 424 >5VC7-A nrPDB Length = 564 Score = 34.4 bits (77), Expect = 0.078, Method: Composition-based stats. Identities = 49/289 (16%), Positives = 82/289 (28%), Gaps = 70/289 (24%) Query: 14 NALSHNEELTNFLKSLSDQPRDLPHL------------LLYGPNGTGKKTRCMALLESIF 61 + + E++ +K + P P + LLYGP G GK A+ Sbjct: 286 DDIGGLEDVKREIKETVELPLLKPDVFKRLGIRPSKGFLLYGPPGVGKTLLAKAVATE-- 343 Query: 62 GPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQ 121 + P L S I+E+ K+ Q+ Sbjct: 344 -------------------SNANFISIKGPEVL----SKWVGESEKAIREIFKKAKQVAP 380 Query: 122 VDFQDSKDGLAHRYKCVIINEANSL------TKDAQAALRRTMEKYSK-------NIRLI 168 V ++E +S+ T D+ R + + N ++ Sbjct: 381 A--------------IVFLDEIDSIAPRRGTTSDSGVTERIVNQLLTSLDGIEVMNGVVV 426 Query: 169 MVCDSMSPIIAPIKSRCLLI----RCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQ 224 + + I+ P R P P +IL V + + L L IAQ Sbjct: 427 IGATNRPDIMDPALLRAGRFDKLIYIPPPDKEARLSILK--VHTKNMPLAPDVDLNDIAQ 484 Query: 225 ASNGNLRVSLLMLESMALNNELALKSSSPIIKPDWIIVIHKLTRKIVKE 273 + G + L L A N + + + K R V E Sbjct: 485 RTEGYVGADLENLCREAGMNAYRENPDATSVSQKNFLDALKTIRPSVDE 533 Score = 34.1 bits (76), Expect = 0.11, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 45/121 (37%), Gaps = 5/121 (4%) Query: 39 LLLYGPNGTGKKTRCMALLESIFGPGVYRLK---IDVRQFVTASNRKLELNVVSSPYHLE 95 ++LYGP GTGK A+ G + I + + + + E+ + Sbjct: 46 VILYGPPGTGKTLIARAVANE-SGANFLSINGPEIMSKYYGQSEQKLREIFSKAEETAPS 104 Query: 96 ITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALR 155 I D ++ +E+ EV + DG+ R ++I N + ALR Sbjct: 105 IIFIDEIDSIAPKREEVQGEVERRVVAQLLTLMDGMKERGHVIVIGATNRIDA-IDPALR 163 Query: 156 R 156 R Sbjct: 164 R 164 >2R65-A nrPDB Length = 268 Score = 34.1 bits (76), Expect = 0.093, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 4/47 (8%) Query: 21 ELTNFLK---SLSDQPRDLPH-LLLYGPNGTGKKTRCMALLESIFGP 63 E+ +FLK ++ +P +LL GP GTGK A+ P Sbjct: 25 EIVDFLKYPERYANLGAKIPKGVLLVGPPGTGKTLLAKAVAGEAHVP 71 >5G4G-A nrPDB Length = 721 Score = 34.1 bits (76), Expect = 0.10, Method: Composition-based stats. Identities = 49/289 (16%), Positives = 82/289 (28%), Gaps = 70/289 (24%) Query: 14 NALSHNEELTNFLKSLSDQPRDLPHL------------LLYGPNGTGKKTRCMALLESIF 61 + + E++ +K + P P + LLYGP G GK A+ Sbjct: 462 DDIGGLEDVKREIKETVELPLLKPDVFKRLGIRPSKGFLLYGPPGVGKTLLAKAVATE-- 519 Query: 62 GPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQ 121 + P L S I+E+ K+ Q+ Sbjct: 520 -------------------SNANFISIKGPEVL----SKWVGESEKAIREIFKKAKQVAP 556 Query: 122 VDFQDSKDGLAHRYKCVIINEANSL------TKDAQAALRRTMEKYSK-------NIRLI 168 V ++E +S+ T D+ R + + N ++ Sbjct: 557 A--------------IVFLDEIDSIAPRRGTTSDSGVTERIVNQLLTSLDGIEVMNGVVV 602 Query: 169 MVCDSMSPIIAPIKSRCLLI----RCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQ 224 + + I+ P R P P +IL V + + L L IAQ Sbjct: 603 IGATNRPDIMDPALLRAGRFDKLIYIPPPDKEARLSILK--VHTKNMPLAPDVDLNDIAQ 660 Query: 225 ASNGNLRVSLLMLESMALNNELALKSSSPIIKPDWIIVIHKLTRKIVKE 273 + G + L L A N + + + K R V E Sbjct: 661 RTEGYVGADLENLCREAGMNAYRENPDATSVSQKNFLDALKTIRPSVDE 709 Score = 33.7 bits (75), Expect = 0.12, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 45/121 (37%), Gaps = 5/121 (4%) Query: 39 LLLYGPNGTGKKTRCMALLESIFGPGVYRLK---IDVRQFVTASNRKLELNVVSSPYHLE 95 ++LYGP GTGK A+ G + I + + + + E+ + Sbjct: 222 VILYGPPGTGKTLIARAVANE-SGANFLSINGPEIMSKYYGQSEQKLREIFSKAEETAPS 280 Query: 96 ITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALR 155 I D ++ +E+ EV + DG+ R ++I N + ALR Sbjct: 281 IIFIDEIDSIAPKREEVQGEVERRVVAQLLTLMDGMKERGHVIVIGATNRIDA-IDPALR 339 Query: 156 R 156 R Sbjct: 340 R 340 >6EF0-H nrPDB Length = 257 Score = 33.7 bits (75), Expect = 0.12, Method: Composition-based stats. Identities = 28/223 (12%), Positives = 66/223 (29%), Gaps = 70/223 (31%) Query: 12 SLNALSHNEELTNFLKSLSDQPRDLPH------------LLLYGPNGTGKKTRCMALLES 59 + + + ++ L+ + + P P +LLYGP GTGK A+ Sbjct: 7 TYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVAN- 65 Query: 60 IFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQM 119 + + ++Q+ + E A+M Sbjct: 66 -----------------------------------RTDATFIRVIGSELVQKYVGEGARM 90 Query: 120 EQVDFQDSKDGLAHRYKCVIINEANSL-------TKDAQAALRRTMEK---------YSK 163 + F+ ++ A + +E +++ ++RTM + Sbjct: 91 VRELFEMARTKKAC---IIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDPRG 147 Query: 164 NIRLIMVCDSMSPIIAPIKSRCLLIR---CPAPSDSEISTILS 203 NI+++ + + + + + R P + I Sbjct: 148 NIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIFR 190 >6E11-1 nrPDB Length = 906 Score = 33.7 bits (75), Expect = 0.12, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 46/151 (30%), Gaps = 34/151 (22%) Query: 16 LSHNEELTNFLKSLSDQP--------RDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYR 67 + NE++ L + + + L GP G GK L +F Sbjct: 603 IIGNEDIIKSLSDAVVKAATGMKDPEKPIGTFLFLGPTGVGKTELAKTLAIELFNSKDNL 662 Query: 68 LKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDS 127 +++++ +F A S P +G +D + E ++E Sbjct: 663 IRVNMSEFTEAH---------SVSKITGSPPGYVGFSDSGQLTEAVRE------------ 701 Query: 128 KDGLAHRYKCVIINEANSLTKDAQAALRRTM 158 + V+ +E D L + + Sbjct: 702 -----KPHSVVLFDELEKAHADVFKVLLQIL 727 Score = 31.7 bits (70), Expect = 0.43, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 40/107 (37%), Gaps = 10/107 (9%) Query: 6 DKYRPKSLNALSHNEELTN-FLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPG 64 +K R L + +E ++SL ++ P +L G GTGK T L+ I Sbjct: 199 EKVRNGKLQGIYGRDEEIRAIIESLLRYNKNSP--VLVGNPGTGKTTIVEGLVYRIEKGD 256 Query: 65 VYR-------LKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNN 104 V + + ++ R+F + ++ + E E+ Sbjct: 257 VPKELQGYTVISLNFRKFTSGTSYRGEFETRMKNIIKELKNKKNKII 303 >2IXE-A nrPDB Length = 271 Score = 33.7 bits (75), Expect = 0.13, Method: Composition-based stats. Identities = 35/159 (22%), Positives = 62/159 (38%), Gaps = 9/159 (5%) Query: 41 LYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVS-SPYHLEITPS 99 L GPNG+GK T ALL++++ P ++ +D V + L V + L S Sbjct: 50 LVGPNGSGKSTVA-ALLQNLYQPTGGKVLLDGEPLVQYDHHYLHTQVAAVGQEPLLFGRS 108 Query: 100 DMGNNDRIVIQELLKE--VAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQA--ALR 155 N + + E A + D G Y + N L+ + AL Sbjct: 109 FRENIAYGLTRTPTMEEITAVAMESGAHDFISGFPQGYDTEVGETGNQLSGGQRQAVALA 168 Query: 156 RTMEKYSKNIRLIMVCDSMSPIIAPIKSRCLLIRCPAPS 194 R + + RL+++ ++ S + A + R + +P Sbjct: 169 RALIRKP---RLLILDNATSALDAGNQLRVQRLLYESPE 204 >6ED3-A nrPDB Length = 848 Score = 33.7 bits (75), Expect = 0.14, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 3/64 (4%) Query: 9 RPKSLNALSHNE-ELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYR 67 R L+ + + E+ ++ LS + ++ P L+ G G GK L + I V Sbjct: 173 REGKLDPVIGRDNEIRRVVQVLSRRTKNNPVLI--GEPGVGKTAIVEGLAQRIVAGDVPE 230 Query: 68 LKID 71 D Sbjct: 231 SLRD 234 Score = 32.1 bits (71), Expect = 0.34, Method: Composition-based stats. Identities = 39/246 (15%), Positives = 69/246 (28%), Gaps = 49/246 (19%) Query: 28 SLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNV 87 +SD R + GP G GK AL + +F ++ID+ ++ + Sbjct: 592 GVSDPNRPTGAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGA 651 Query: 88 VSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLT 147 E Q ++ Y V+ +E Sbjct: 652 PPGYVGYEA--------------------------GGQLTEAVRRRPYTVVLFDEIEKAH 685 Query: 148 KDAQAALRRTMEKYS-----------KNIRLIMVCDSMSPIIAPIKSRCLLIRCPAPSDS 196 D L + +++ +N LI+ + S A + Sbjct: 686 PDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTSNLGSGGSAEQVLAAVRATFKP---- 741 Query: 197 EISTILSDVVTNERIQLETKDILKRIAQASNGNL-----RVSLLMLESMALNNELALKSS 251 E L DV+ E + + L RI L + L + S+ LA + Sbjct: 742 EFINRLDDVLIFEGL---NPEELVRIVDIQLAQLGKRLAQRRLQLQVSLPAKRWLAQRGF 798 Query: 252 SPIIKP 257 P+ Sbjct: 799 DPVYGA 804 >6D00-1 nrPDB Length = 883 Score = 33.7 bits (75), Expect = 0.14, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 3/49 (6%) Query: 13 LNALSHNEELTNF-LKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESI 60 L+ + +E+ + ++ LS + ++ P L+ G G GK L I Sbjct: 177 LDPVIGRDEIISRVIRVLSRRTKNNPCLV--GEPGVGKTAIAEGLANRI 223 Score = 32.5 bits (72), Expect = 0.32, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 26/70 (37%), Gaps = 8/70 (11%) Query: 16 LSHNEELTNFL--------KSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYR 67 + +E + L ++ R L L GP G GK L +F Sbjct: 572 VVGQDEAIKAICDAIRLSRTGLQNRNRPLASFLFLGPTGCGKTLCVKELAAFLFNDPGAI 631 Query: 68 LKIDVRQFVT 77 ++ID+ +++ Sbjct: 632 VRIDMSEYME 641 >5VHP-E nrPDB Length = 262 Score = 33.7 bits (75), Expect = 0.14, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 23/61 (37%), Gaps = 12/61 (19%) Query: 12 SLNALSHNEELTNFLKSLSDQPRDLPHL------------LLYGPNGTGKKTRCMALLES 59 S + + E L+ + + P P L LLYGP GTGK A+ Sbjct: 4 SYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQ 63 Query: 60 I 60 + Sbjct: 64 L 64 >6EF3-H nrPDB Length = 467 Score = 33.3 bits (74), Expect = 0.15, Method: Composition-based stats. Identities = 29/230 (12%), Positives = 69/230 (30%), Gaps = 70/230 (30%) Query: 5 VDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPH------------LLLYGPNGTGKKTR 52 V++ + + + ++ L+ + + P P +LLYGP GTGK Sbjct: 200 VEEKPDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLC 259 Query: 53 CMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQEL 112 A+ + + ++Q+ Sbjct: 260 ARAVAN------------------------------------RTDATFIRVIGSELVQKY 283 Query: 113 LKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSL-------TKDAQAALRRTMEK----- 160 + E A+M + F+ ++ A + +E +++ ++RTM + Sbjct: 284 VGEGARMVRELFEMARTKKAC---IIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQL 340 Query: 161 ----YSKNIRLIMVCDSMSPIIAPIKSRCLLIR---CPAPSDSEISTILS 203 NI+++ + + + + + R P + I Sbjct: 341 DGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIFR 390 >5VHO-F nrPDB Length = 267 Score = 33.3 bits (74), Expect = 0.16, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 69/203 (33%), Gaps = 30/203 (14%) Query: 5 VDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPG 64 +DK + + A+ ++L QP +L+YGP GTGK A Sbjct: 26 LDKQIQELVEAIVLPMNHKEKFENLGIQPPK--GVLMYGPPGTGKTLLARACAAQTKATF 83 Query: 65 VYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDF 124 + + Q KL V + L + I I EL + ++ D Sbjct: 84 LKLAGPQLVQMFIGDGAKL----VRDAFAL----AKEKAPSIIFIDEL--DAIGTKRFDS 133 Query: 125 QDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKSR 184 + + D R ++N+ + + Q +++I + + I+ P R Sbjct: 134 EKAGDREVQRTMLELLNQLDGFQPNTQ-------------VKVIAATNRVD-ILDPALLR 179 Query: 185 C----LLIRCPAPSDSEISTILS 203 I P P++ + I+ Sbjct: 180 SGRLDRKIEFPMPNEEARARIMQ 202 >5W0T-A nrPDB Length = 304 Score = 33.3 bits (74), Expect = 0.16, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 47/125 (37%), Gaps = 2/125 (1%) Query: 39 LLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITP 98 +LLYGP G GK AL + + + + K+ + S L+ Sbjct: 80 VLLYGPPGCGKTMLAKALAKESGANFISIRMSSIMDKWYGESNKIVDAMFSLANKLQPCI 139 Query: 99 SDMGNNDRIVIQELLK--EVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRR 156 + D + + EV + +F DGL + + +II N + A LRR Sbjct: 140 IFIDEIDSFLRERSSTDHEVTATLKAEFMTLWDGLLNNGRVMIIGATNRINDIDDAFLRR 199 Query: 157 TMEKY 161 +++ Sbjct: 200 LPKRF 204 >6EF0-L nrPDB Length = 273 Score = 33.3 bits (74), Expect = 0.16, Method: Composition-based stats. Identities = 36/248 (14%), Positives = 78/248 (31%), Gaps = 72/248 (29%) Query: 12 SLNALSHNEELTNFLKSLSDQPRDLPHL------------LLYGPNGTGKKTRCMALLES 59 + + + E L+ + + P P + LLYGP GTGK A+ + Sbjct: 16 TFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAAT 75 Query: 60 IFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQM 119 I N + SP ++ + + E A++ Sbjct: 76 IGA-----------------------NFIFSP-------------ASGIVDKYIGESARI 99 Query: 120 EQVDFQDSKDGLAHRYKCVIINEANS--------LTKDAQAALRRTMEKYS--------K 163 + F +K+ + ++E ++ T + R ME + Sbjct: 100 IREMFAYAKEHEPC---IIFMDEVDAIGGRRFSEGTSADREIQRTLMELLTQMDGFDNLG 156 Query: 164 NIRLIMVCDSMSPIIAPIKSRCLLIR---CPAPSDSEISTILSDVVTNERIQLETKDILK 220 ++IM + + + L R P P+++ I + +++ + + Sbjct: 157 QTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFK--IHTAKVKKTGEFDFE 214 Query: 221 RIAQASNG 228 + S+G Sbjct: 215 AAVKMSDG 222 >3CF0-A nrPDB Length = 301 Score = 33.3 bits (74), Expect = 0.17, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 67/233 (28%), Gaps = 42/233 (18%) Query: 12 SLNALSHNEELTNFLKSLSDQPRDLPH------------LLLYGPNGTGKKTRCMALLES 59 + + E++ L+ L P + P +L YGP G GK A+ Sbjct: 13 TWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 72 Query: 60 IFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQM 119 + + P L + + N R + + + + Sbjct: 73 ---------------------CQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCV 111 Query: 120 EQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIA 179 D DS A+ + L +K I+ + II Sbjct: 112 LFFDELDSIAKARGGNIGDGGGAADRVIN---QILTEMDGMSTKKNVFIIGATNRPDIID 168 Query: 180 PIKSRC----LLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNG 228 P R LI P P + IL + + + L+ +A+ +NG Sbjct: 169 PAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVD--LEFLAKMTNG 219 >5U1D-B nrPDB Length = 686 Score = 33.3 bits (74), Expect = 0.17, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 3/76 (3%) Query: 29 LSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVV 88 + +P ++ L+ GPNG+GK T ALL++++ P ++ +D + + L VV Sbjct: 491 FTLRPGEVTALV--GPNGSGKSTVA-ALLQNLYQPTGGQVLLDEKPISQYEHCYLHSQVV 547 Query: 89 SSPYHLEITPSDMGNN 104 S + + NN Sbjct: 548 SVGQEPVLFSGSVRNN 563 >6MCK-A nrPDB Length = 606 Score = 33.3 bits (74), Expect = 0.19, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 67/233 (28%), Gaps = 42/233 (18%) Query: 12 SLNALSHNEELTNFLKSLSDQPRDLPH------------LLLYGPNGTGKKTRCMALLES 59 + + E++ L+ L P + P +L YGP G GK A+ Sbjct: 267 TWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 326 Query: 60 IFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQM 119 + + P L + + N R + + + + Sbjct: 327 ---------------------CQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCV 365 Query: 120 EQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIA 179 D DS A+ + L +K I+ + II Sbjct: 366 LFFDELDSIAKARGGNIGDGGGAADRVIN---QILTEMDGMSTKKNVFIIGATNRPDIID 422 Query: 180 PIKSRC----LLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNG 228 P R LI P P + IL + + + L+ +A+ +NG Sbjct: 423 PAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVD--LEFLAKMTNG 473 Score = 32.9 bits (73), Expect = 0.22, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 12/21 (57%) Query: 39 LLLYGPNGTGKKTRCMALLES 59 +LLYGP GTGK A+ Sbjct: 33 ILLYGPPGTGKTLIARAVANE 53 >5C18-A nrPDB Length = 785 Score = 32.9 bits (73), Expect = 0.19, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 67/233 (28%), Gaps = 42/233 (18%) Query: 12 SLNALSHNEELTNFLKSLSDQPRDLPH------------LLLYGPNGTGKKTRCMALLES 59 + + E++ L+ L P + P +L YGP G GK A+ Sbjct: 474 TWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE 533 Query: 60 IFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQM 119 + + P L + + N R + + + + Sbjct: 534 ---------------------CQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCV 572 Query: 120 EQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIA 179 D DS A+ + L +K I+ + II Sbjct: 573 LFFDELDSIAKARGGNIGDGGGAADRVIN---QILTEMDGMSTKKNVFIIGATNRPDIID 629 Query: 180 PIKSRC----LLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNG 228 P R LI P P + IL + + + L+ +A+ +NG Sbjct: 630 PAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVD--LEFLAKMTNG 680 Score = 32.9 bits (73), Expect = 0.22, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 12/21 (57%) Query: 39 LLLYGPNGTGKKTRCMALLES 59 +LLYGP GTGK A+ Sbjct: 240 ILLYGPPGTGKTLIARAVANE 260 >6MSD-E nrPDB Length = 403 Score = 32.9 bits (73), Expect = 0.19, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 23/61 (37%), Gaps = 12/61 (19%) Query: 12 SLNALSHNEELTNFLKSLSDQPRDLPHL------------LLYGPNGTGKKTRCMALLES 59 S + + E L+ + + P P L LLYGP GTGK A+ Sbjct: 145 SYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQ 204 Query: 60 I 60 + Sbjct: 205 L 205 >5VHO-A nrPDB Length = 267 Score = 32.9 bits (73), Expect = 0.19, Method: Composition-based stats. Identities = 31/230 (13%), Positives = 68/230 (29%), Gaps = 70/230 (30%) Query: 5 VDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPH------------LLLYGPNGTGKKTR 52 V++ + + + +E L+ + + P P +LL+GP GTGK Sbjct: 9 VEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLC 68 Query: 53 CMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQEL 112 A+ + ++Q+ Sbjct: 69 ARAVAN------------------------------------RTDACFIRVIGSELVQKY 92 Query: 113 LKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSL-------TKDAQAALRRTMEK----- 160 + E A+M + F+ ++ A + +E +++ ++RTM + Sbjct: 93 VGEGARMVRELFEMARTKKAC---LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQL 149 Query: 161 ----YSKNIRLIMVCDSMSPIIAPIKSRCLL---IRCPAPSDSEISTILS 203 NI+++M + + + L I P + I Sbjct: 150 DGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFK 199 >5KWA-A nrPDB Length = 497 Score = 32.9 bits (73), Expect = 0.20, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 46/135 (34%), Gaps = 22/135 (16%) Query: 14 NALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVR 73 +A+ + S +P +LLYGP G GK A+ S+ K+ Sbjct: 161 DAVELPFLHKELYREYSLRPPK--GVLLYGPPGCGKTLIAKAVANSL------AKKMAEV 212 Query: 74 QFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAH 133 + A K + P L + + R++ Q ++ ++ V Sbjct: 213 RGDDAHEAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKASEGTPV----------- 261 Query: 134 RYKCVIINEANSLTK 148 V +E +S+ + Sbjct: 262 ---IVFFDEMDSIFR 273 >5VFU-A nrPDB Length = 361 Score = 32.9 bits (73), Expect = 0.22, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 26/65 (40%), Gaps = 12/65 (18%) Query: 5 VDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPH------------LLLYGPNGTGKKTR 52 V++ + + + +E L+ + + P P +LL+GP GTGK Sbjct: 94 VEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLC 153 Query: 53 CMALL 57 A+ Sbjct: 154 ARAVA 158 >3HU1-A nrPDB Length = 489 Score = 32.9 bits (73), Expect = 0.23, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 12/21 (57%) Query: 39 LLLYGPNGTGKKTRCMALLES 59 +LLYGP GTGK A+ Sbjct: 241 ILLYGPPGTGKTLIARAVANE 261 >1YE8-A nrPDB Length = 178 Score = 32.9 bits (73), Expect = 0.24, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 53/148 (35%), Gaps = 4/148 (2%) Query: 39 LLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITP 98 +++ G G GK T ++E + + +VR T + + + Sbjct: 3 IIITGEPGVGKTTLVKKIVERLGKRAIGFWTEEVRDPETKKRTGFRIITTEGKKKIFSSK 62 Query: 99 SDMGNNDRIVIQELLKEVAQME-QVDFQDSKDGLAHRYKCVIINEANSL---TKDAQAAL 154 ++ ++ + + ++ R K +II+E + +K + + Sbjct: 63 FFTSKKLVGSYGVNVQYFEELAIPILERAYREAKKDRRKVIIIDEIGKMELFSKKFRDLV 122 Query: 155 RRTMEKYSKNIRLIMVCDSMSPIIAPIK 182 R+ M + N+ + + P++ I+ Sbjct: 123 RQIMHDPNVNVVATIPIRDVHPLVKEIR 150 >5UJM-A nrPDB Length = 522 Score = 32.9 bits (73), Expect = 0.24, Method: Composition-based stats. Identities = 52/289 (17%), Positives = 101/289 (34%), Gaps = 35/289 (12%) Query: 39 LLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITP 98 + + G GTGK ++ + + Q++ + KL E Sbjct: 191 MYISGVPGTGKTATVHEVIRCL-QQAAQANDVPPFQYIEVNGMKL----------TEPHQ 239 Query: 99 SDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTM 158 + ++ Q+ A E + Q G ++++E + L Q + Sbjct: 240 VYVQILQKLTGQKATANHA-AELLAKQFCTRGSPQETTVLLVDELDILWTHKQDIMYNLF 298 Query: 159 EKYS-KNIRLIMVC-----DSMSPI-IAPIKSRCLLIR--CPAPSDSEISTILSDVVTNE 209 + + K RL+++ D I + + SR L R + S++ IL + + Sbjct: 299 DWPTHKEARLVVLAIANTMDLPERIMMNRVSSRLGLTRMCFQPYTYSQLQQILRSRLKH- 357 Query: 210 RIQLETKDILKRIAQ---ASNGNLRVSLLMLESMALNNELALKSSSPIIKPDW-IIVIHK 265 ++ D ++ +A+ A +G+ R L + E + + KPD +V Sbjct: 358 -LKAFEDDAIQLVARKVAALSGDARRCLDICRRATEICEFSQQ------KPDSPGLVTIA 410 Query: 266 LTRKIVKERSVNSLIECRAVLYDLLAHCIPANIILKELTFSLLDVETLN 314 + + V E +S I L + A IL E S L+ T Sbjct: 411 HSMEAVDEMFSSSYITAIKNSSVLEQSFLRA--ILAEFRRSGLEEATFQ 457 >4WW4-B nrPDB Length = 513 Score = 32.5 bits (72), Expect = 0.25, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 65/182 (35%), Gaps = 19/182 (10%) Query: 77 TASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYK 136 T S ++++ + L + D G + ++ +VA+ ++ + G Sbjct: 265 TVSLHEIDVINSRTQGFLALFSGDTGEIRSEIRDQINTKVAEWKEEGKAEIVPG------ 318 Query: 137 CVIINEANSLTKDAQAALRRTME---------KYSKNIRLIMVCDS--MSPIIAPIKSRC 185 + I+E + L + + + R +E ++ + I D + R Sbjct: 319 VLFIDEVHMLDIECFSYINRALESDLAPIVIMASNRGVSRIRGTDYKSPHGLPLDFLDRV 378 Query: 186 LLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQAS-NGNLRVSLLMLESMALNN 244 ++I + E+ ILS E + L T D L + + LR + ++ + L Sbjct: 379 VIINTHPYTPDELRQILSIRAQEEEVDL-TPDALALLTKIGQEAGLRYASNLITTSQLIA 437 Query: 245 EL 246 Sbjct: 438 AK 439 Score = 29.8 bits (65), Expect = 2.0, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 13/22 (59%) Query: 39 LLLYGPNGTGKKTRCMALLESI 60 +L+ GP TGK M + +S+ Sbjct: 98 VLIAGPPSTGKTAIAMGMAQSL 119 >3H1T-A nrPDB Length = 590 Score = 32.5 bits (72), Expect = 0.25, Method: Composition-based stats. Identities = 22/174 (12%), Positives = 54/174 (31%), Gaps = 13/174 (7%) Query: 5 VDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPG 64 V Y P+ + + N Q + L+ GTGK + ++ Sbjct: 174 VSGYSPR-----YYQQIAINRAVQSVLQGKK--RSLITMATGTGKTVVAFQISWKLWSAR 226 Query: 65 VYRL-KIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVD 123 R + + ++R + ++ + V++ A + + Sbjct: 227 WNRTGDYRKPRILFLADRNVLVDDPKDKTFTPFGDARHKIEGGKVVKSREIYFAIYQSIA 286 Query: 124 FQDSKDGLAHRY-----KCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCD 172 + + GL + +II+E + + + R +E + ++ M Sbjct: 287 SDERRPGLYKEFPQDFFDLIIIDECHRGSARDNSNWREILEYFEPAFQIGMTAT 340 >4XGU-A nrPDB Length = 424 Score = 32.5 bits (72), Expect = 0.25, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 14/22 (63%) Query: 39 LLLYGPNGTGKKTRCMALLESI 60 +LL GP GTGK + C L + + Sbjct: 175 ILLTGPPGTGKTSLCKGLAQHL 196 >5L3S-B nrPDB Length = 296 Score = 32.5 bits (72), Expect = 0.26, Method: Composition-based stats. Identities = 20/147 (13%), Positives = 54/147 (36%), Gaps = 16/147 (10%) Query: 11 KSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKI 70 KS+ + + T+ ++ + + ++ +G NG GK T ++ + + + Sbjct: 76 KSITEILTKNQKTDLIEKIRSSGKKPFVIIFFGVNGVGKTTTIAKVVNMLKKNNLSTIIA 135 Query: 71 DVRQFVTASN-------RKLELNVVSSPYHLE--------ITPSDMGNNDRIVIQELLK- 114 F A+ KLE+ ++ Y + I+ + N D ++I + Sbjct: 136 ASDTFRAAAQEQLAYHASKLEVQLIRGKYGADPASVAFDAISFAKSRNIDVVLIDTAGRM 195 Query: 115 EVAQMEQVDFQDSKDGLAHRYKCVIIN 141 + + + ++ +I++ Sbjct: 196 HIDSDLVEELKKVLRIAKPDFRILILD 222 >1JBK-A nrPDB Length = 195 Score = 32.5 bits (72), Expect = 0.26, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 23/56 (41%), Gaps = 3/56 (5%) Query: 6 DKYRPKSLNALSHNEELTNF-LKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESI 60 ++ L+ + +E ++ L + ++ P L+ G G GK L + I Sbjct: 14 ERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLI--GEPGVGKTAIVEGLAQRI 67 >5WVI-L nrPDB Length = 437 Score = 32.5 bits (72), Expect = 0.28, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 12/61 (19%) Query: 12 SLNALSHNEELTNFLKSLSDQPRDLPHL------------LLYGPNGTGKKTRCMALLES 59 + + + E L+ + + P P + LLYGP GTGK A+ + Sbjct: 179 TFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAAT 238 Query: 60 I 60 I Sbjct: 239 I 239 >6FVU-L nrPDB Length = 388 Score = 32.5 bits (72), Expect = 0.28, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 12/61 (19%) Query: 12 SLNALSHNEELTNFLKSLSDQPRDLPHL------------LLYGPNGTGKKTRCMALLES 59 + + + E L+ + + P P + LLYGP GTGK A+ + Sbjct: 131 TFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAAT 190 Query: 60 I 60 I Sbjct: 191 I 191 >6EPC-H nrPDB Length = 433 Score = 32.5 bits (72), Expect = 0.28, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 26/65 (40%), Gaps = 12/65 (18%) Query: 5 VDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPH------------LLLYGPNGTGKKTR 52 V++ + + + +E L+ + + P P +LL+GP GTGK Sbjct: 166 VEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLC 225 Query: 53 CMALL 57 A+ Sbjct: 226 ARAVA 230 >5VFP-F nrPDB Length = 396 Score = 32.5 bits (72), Expect = 0.29, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 69/203 (33%), Gaps = 30/203 (14%) Query: 5 VDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPG 64 +DK + + A+ ++L QP +L+YGP GTGK A Sbjct: 148 LDKQIQELVEAIVLPMNHKEKFENLGIQPPK--GVLMYGPPGTGKTLLARACAAQTKATF 205 Query: 65 VYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDF 124 + + Q KL V + L + I I EL + ++ D Sbjct: 206 LKLAGPQLVQMFIGDGAKL----VRDAFAL----AKEKAPSIIFIDEL--DAIGTKRFDS 255 Query: 125 QDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKSR 184 + + D R ++N+ + + Q +++I + + I+ P R Sbjct: 256 EKAGDREVQRTMLELLNQLDGFQPNTQ-------------VKVIAATNRVD-ILDPALLR 301 Query: 185 C----LLIRCPAPSDSEISTILS 203 I P P++ + I+ Sbjct: 302 SGRLDRKIEFPMPNEEARARIMQ 324 >3SYK-A nrPDB Length = 309 Score = 32.5 bits (72), Expect = 0.31, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 61/195 (31%), Gaps = 52/195 (26%) Query: 38 HLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEIT 97 H+ G GTGK T + + + L V + + +T Sbjct: 69 HMSFTGNPGTGKTTVALKMAGLLH----------------------RLGYVRKGHLVSVT 106 Query: 98 PSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTK--------- 148 D+ KEV + + I+EA L + Sbjct: 107 RDDLVGQYIGHTAPKTKEVLKRAMGG-------------VLFIDEAYYLYRPDNERDYGQ 153 Query: 149 DAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKS----RCLL---IRCPAPSDSEISTI 201 +A L + ME ++ ++++ + +S R + I P SD E+ I Sbjct: 154 EAIEILLQVMENNRDDL-VVILAGYADRMENFFQSNPGFRSRIAHHIEFPDYSDEELFEI 212 Query: 202 LSDVVTNERIQLETK 216 ++ ++ Q+ + Sbjct: 213 AGHMLDDQNYQMTPE 227 >3JC7-2 nrPDB Length = 868 Score = 32.5 bits (72), Expect = 0.31, Method: Composition-based stats. Identities = 32/235 (13%), Positives = 68/235 (28%), Gaps = 46/235 (19%) Query: 137 CVIINEANSLTKDAQAALRRTMEKYS-------------KNIRLIMVCD----------- 172 +I+E + + + ++ ME+ S +I + Sbjct: 603 VCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLQARCSIIAAANPNGGRYNSTLP 662 Query: 173 --SMSPIIAPIKSR----CLLIRCPAPSDSEISTILSDVVTNERIQLETKDIL------- 219 + PI SR C++ D E L+ V + ++ ++ Sbjct: 663 LAQNVSLTEPILSRFDILCVV---RDLVDEEADERLATFVVDSHVRSHPENDEDREGEEL 719 Query: 220 ----KRIAQASNGNLRVSLLMLESMALNNELALKSSSPIIKPDWIIVIHKLTRKIVKERS 275 + + + L + + SPI + + IH KI + Sbjct: 720 KNNGESAIEQGEDEINEQLNARQRRLQRQRKKEEEISPIPQELLMKYIHYARTKIYPKLH 779 Query: 276 VNSLIECRAVLYDLLAHCIPANIILKELTFSLLDVETLNTTN-KSSIIEYSSVFD 329 + + V DL I + L + + + K + E+ S +D Sbjct: 780 QMDMDKVSRVYADLRRESISTGSFPITV-RHLESILRIAESFAKMRLSEFVSSYD 833 >3PXG-A nrPDB Length = 468 Score = 32.1 bits (71), Expect = 0.33, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 27/66 (40%), Gaps = 3/66 (4%) Query: 9 RPKSLNALSHNEELTNF-LKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYR 67 + SL+ + + ++ LS + ++ P L+ G G GK L + I V Sbjct: 175 KEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLI--GEPGVGKTAIAEGLAQQIINNEVPE 232 Query: 68 LKIDVR 73 + D R Sbjct: 233 ILRDKR 238 >6EPD-M nrPDB Length = 442 Score = 32.1 bits (71), Expect = 0.34, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 69/203 (33%), Gaps = 30/203 (14%) Query: 5 VDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPG 64 +DK + + A+ ++L QP +L+YGP GTGK A Sbjct: 194 LDKQIQELVEAIVLPMNHKEKFENLGIQPPK--GVLMYGPPGTGKTLLARACAAQTKATF 251 Query: 65 VYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDF 124 + + Q KL V + L + I I EL + ++ D Sbjct: 252 LKLAGPQLVQMFIGDGAKL----VRDAFAL----AKEKAPSIIFIDEL--DAIGTKRFDS 301 Query: 125 QDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKSR 184 + + D R ++N+ + + Q +++I + + I+ P R Sbjct: 302 EKAGDREVQRTMLELLNQLDGFQPNTQ-------------VKVIAATNRVD-ILDPALLR 347 Query: 185 C----LLIRCPAPSDSEISTILS 203 I P P++ + I+ Sbjct: 348 SGRLDRKIEFPMPNEEARARIMQ 370 >1IHU-A nrPDB Length = 589 Score = 32.1 bits (71), Expect = 0.37, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 38/122 (31%), Gaps = 8/122 (6%) Query: 37 PHLLLYGPNGTGKKT----RCMALLES----IFGPGVYRLKIDVRQFVTASNRKLELNVV 88 P+L G G GK + + L E + + T N + V Sbjct: 9 PYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVSTDPASNVGQVFSQTIGNTIQAIASV 68 Query: 89 SSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTK 148 LEI P R I + +K V + V + + A + +E L Sbjct: 69 PGLSALEIDPQAAAQQYRARIVDPIKGVLPDDVVSSINEQLSGACTTEIAAFDEFTGLLT 128 Query: 149 DA 150 DA Sbjct: 129 DA 130 >5FM7-A nrPDB Length = 464 Score = 32.1 bits (71), Expect = 0.38, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 38/98 (38%), Gaps = 1/98 (1%) Query: 39 LLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITP 98 +LL G GTGK +A+ + + G + I + + +K E+ + + + + Sbjct: 69 VLLAGGPGTGKTALALAISQEL-GTKIPFCPITGSEIYSTEVKKTEVLMENFRRAIGLRV 127 Query: 99 SDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYK 136 + + + E+ E A+ + + L K Sbjct: 128 RETKDVYEGEVTEMTPEEAENPLGGYGKTISTLLIGLK 165 Score = 31.4 bits (69), Expect = 0.67, Method: Composition-based stats. Identities = 24/134 (17%), Positives = 48/134 (35%), Gaps = 19/134 (14%) Query: 137 CVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCD-------------SMSPIIAPIKS 183 + I+EA+ L + L + +E I +++ + + I Sbjct: 301 VLFIDEAHMLDIECFTYLNKALESPIAPI-VVLASNRGIATIRGADDLKAAHGIPPDFLQ 359 Query: 184 RCLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLL-MLESMAL 242 R L+I EI I+ E +QL + + + +R+SL L+ +A Sbjct: 360 RLLIIPTHPYEPDEIRRIVRIRAQTEGVQLTD----AAVDRVAEHGVRISLRYCLQLLAP 415 Query: 243 NNELALKSSSPIIK 256 + LA + + Sbjct: 416 ASILARVNGRTQVD 429 >4XGC-D nrPDB Length = 459 Score = 32.1 bits (71), Expect = 0.38, Method: Composition-based stats. Identities = 25/139 (17%), Positives = 46/139 (33%), Gaps = 19/139 (13%) Query: 23 TNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESI-----FGPGVYRLKIDVRQFVT 77 L + + + LLL GP G+GK T ++L + FG + +D Sbjct: 36 VRLLLQRTAEMGESNSLLLLGPRGSGKTTLINSVLADLLPNKSFGENTLIVHLDGNLH-- 93 Query: 78 ASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKC 137 ++ ++ L ++ LE ++ A+ Q K G H Sbjct: 94 -TDDRVALKSITVQMQLENAADG----------KVFGSFAENLAFLLQCLKAGGKHSKSV 142 Query: 138 V-IINEANSLTKDAQAALR 155 + I+ E + L Sbjct: 143 IFILEEFDLFCAHHNQTLL 161 >6HA8-V nrPDB Length = 548 Score = 32.1 bits (71), Expect = 0.42, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 52/156 (33%), Gaps = 24/156 (15%) Query: 43 GPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMG 102 GPNG+GK T LL I G + V E+ + E + Sbjct: 330 GPNGSGKTT----LLNIILGQETAEGSVWVSPSANIGYLTQEVFDLPLEQTPEELFENET 385 Query: 103 NNDRIVIQELLKEVAQMEQVDFQDSKD-GLAHRYKC----VIINEANSLTKD-------- 149 R +Q L++ + + K + R K I+ E + L D Sbjct: 386 FKARGHVQNLMRHLGFTAAQWTEPIKHMSMGERVKIKLMAYILEEKDVLILDQPTNHLDL 445 Query: 150 -AQAALRRTMEKYS------KNIRLIMVCDSMSPII 178 ++ L T+ +YS + R + + S ++ Sbjct: 446 PSREQLEETLSQYSGTLLAVSHDRYFLEKTTNSKLV 481 >1LV7-A nrPDB Length = 257 Score = 31.7 bits (70), Expect = 0.49, Method: Composition-based stats. Identities = 11/59 (18%), Positives = 21/59 (35%), Gaps = 11/59 (18%) Query: 12 SLNALSHNEELTNFLKSLSDQ----------PRDLPH-LLLYGPNGTGKKTRCMALLES 59 + ++ +E + L + +P +L+ GP GTGK A+ Sbjct: 10 TFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGE 68 >6EF0-M nrPDB Length = 258 Score = 31.7 bits (70), Expect = 0.51, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 41/118 (34%), Gaps = 14/118 (11%) Query: 40 LLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKL-----ELNVVSSPYHL 94 L+YGP GTGK A + + Q KL L +P + Sbjct: 44 LMYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTII 103 Query: 95 EITPSD---------MGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEA 143 I D + DR V + +L+ + Q++ D LA + +++ A Sbjct: 104 FIDELDAIGTKRFDSEKSGDREVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPA 161 >6AMN-A nrPDB Length = 349 Score = 31.7 bits (70), Expect = 0.51, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 29/71 (40%), Gaps = 3/71 (4%) Query: 6 DKYRPKSLNALSHNEELT-NFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPG 64 ++ R L+ + EE + ++ L+ + + P L+ G G GK + + I Sbjct: 173 EQARQGKLDPVIGREEEIRSTIRVLARRIKSNPCLI--GEPGIGKTAIIEGVAQRIIDDD 230 Query: 65 VYRLKIDVRQF 75 V + + F Sbjct: 231 VPTILQGAKLF 241 >2AKY-A nrPDB Length = 220 Score = 31.7 bits (70), Expect = 0.51, Method: Composition-based stats. Identities = 23/170 (13%), Positives = 50/170 (29%), Gaps = 12/170 (7%) Query: 39 LLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITP 98 ++L GP G GK T+ L E + + Q + LE + L Sbjct: 7 MVLIGPPGAGKGTQAPNLQERFHAAHLATGDMLRSQIAKGTQLGLEAKKIMDQGGL---- 62 Query: 99 SDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTM 158 ++ ++K+ ++ + + + K+ L + + Sbjct: 63 -----VSDDIMVNMIKDELTNNPA-CKNGFILDGFPRTIPQAEKLDQMLKEQGTPLEKAI 116 Query: 159 EKYSKNIRLIMVCDSMSPIIAPIKSRCLLIRCPAPSDSEISTILSDVVTN 208 E K ++V +I P R P + + + + Sbjct: 117 EL--KVDDELLVARITGRLIHPASGRSYHKIFNPPKEDMKDDVTGEALVQ 164 >5D0U-A nrPDB Length = 714 Score = 31.4 bits (69), Expect = 0.57, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 72/191 (37%), Gaps = 9/191 (4%) Query: 39 LLLYGPNGTGKKTRC--MALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEI 96 L+ G G+GK T+ L + + + + V A + + E Sbjct: 57 LVFVGETGSGKTTQIPQYVLYDELPHQTGKLIACTQPRRVAAMSVAQRVADELDVKLGEE 116 Query: 97 TPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEAN--SLTKDAQAAL 154 + ++ + LLK Q+ + D RY C+I++EA+ +L D AL Sbjct: 117 VGYSIRFENKTSSKTLLK-YMTDGQLLREAMHDRDMSRYSCIILDEAHERTLATDILMAL 175 Query: 155 RRTMEKYSKNIRLIMVCDSMSPIIAPIKSRCLLIRCPAPSDSEISTILSDVVTNERIQLE 214 + + + K++++I+ MS + K + P + + + T E + Sbjct: 176 LKQLSERRKDLKIIV----MSATLDAQKFQSYFFNAPLLAVPGRTHPVEIFYTPEAERDY 231 Query: 215 TKDILKRIAQA 225 + ++ + Q Sbjct: 232 VEAAIRTVLQI 242 >6MAT-A nrPDB Length = 813 Score = 31.4 bits (69), Expect = 0.65, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 78/222 (35%), Gaps = 29/222 (13%) Query: 39 LLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITP 98 +LL+GP+G GK T A+ SI + VS+P + T Sbjct: 239 VLLHGPSGCGKTTLAHAIAGSI---------------------GVAFIPVSAPSVIGGTS 277 Query: 99 SDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTM 158 + N R V E ++ + F D D +A R + + + + + R Sbjct: 278 GESEKNIRDVFDEAIR---LAPCLIFLDQIDAIAGRRESANKGMESRIVAEIMNGMDRIR 334 Query: 159 EKYS--KNIRLIMVCDSMSPIIAPIKSRCLL-IRCPAPSDSEISTILSDVVTNERIQLET 215 + KN+ ++ + + I+ R + I PS+ IL + + L Sbjct: 335 QNTPLGKNVVVLAATNRPEFLDPAIRRRFSVEIDMGMPSERAREQILRSLTR--DLSLAD 392 Query: 216 KDILKRIAQASNGNLRVSLLMLESMALNNELALKSSSPIIKP 257 K +A+ + G + L + A++ S + + Sbjct: 393 DINFKELAKMTPGYVGSDLQYVVKAAVSESFQANIDSLLAQA 434 Score = 30.2 bits (66), Expect = 1.5, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 21/55 (38%), Gaps = 2/55 (3%) Query: 5 VDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLES 59 ++ R K ++ + + +P +LL+GP G GK A+ Sbjct: 506 LEDVRKKLEMSIIGPIKNPELFTRVGIKPAA--GILLWGPPGCGKTLVAKAVANE 558 >5VY8-A nrPDB Length = 908 Score = 31.4 bits (69), Expect = 0.66, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 29/71 (40%), Gaps = 3/71 (4%) Query: 6 DKYRPKSLNALSHNEELT-NFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPG 64 ++ R L+ + EE + ++ L+ + + P L+ G G GK + + I Sbjct: 176 EQARQGKLDPVIGREEEIRSTIRVLARRIKSNPCLI--GEPGIGKTAIIEGVAQRIIDDD 233 Query: 65 VYRLKIDVRQF 75 V + + F Sbjct: 234 VPTILQGAKLF 244 >3HV2-A nrPDB Length = 153 Score = 31.4 bits (69), Expect = 0.66, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 49/131 (37%), Gaps = 4/131 (3%) Query: 84 ELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQV--DFQDSKDGLAHRYKCVIIN 141 ELNV + EI D +Q+LL + D + LA R ++I+ Sbjct: 5 ELNVATVTRRPEILLVDSQEVILQRLQQLLSPLPYTLHFARDATQALQLLASREVDLVIS 64 Query: 142 EANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKSRCLLIRC--PAPSDSEIS 199 A+ D L R ++Y R+++ D +IA + + R D E+ Sbjct: 65 AAHLPQMDGPTLLARIHQQYPSTTRILLTGDPDLKLIAKAINEGEIYRYLSKPWDDQELL 124 Query: 200 TILSDVVTNER 210 L + ++ Sbjct: 125 LALRQALEHQH 135 >5V8F-A nrPDB Length = 913 Score = 31.4 bits (69), Expect = 0.69, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 50/135 (37%), Gaps = 14/135 (10%) Query: 39 LLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITP 98 + + G G GK +++ + R ++ F+ L++ + Y Sbjct: 475 IYVAGTPGVGKTLTVREVVKELLSSSAQR---EIPDFLYVEINGLKMVKPTDCYETLWNK 531 Query: 99 SDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVI-INEANSLTKDAQAALRRT 157 V E L A ME ++F + + V+ ++E +++ +Q + Sbjct: 532 ---------VSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKSQDIMYNF 582 Query: 158 MEKYS-KNIRLIMVC 171 + +N +LI++ Sbjct: 583 FNWTTYENAKLIVIA 597 >2X8A-A nrPDB Length = 274 Score = 31.4 bits (69), Expect = 0.70, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 60/200 (30%), Gaps = 40/200 (20%) Query: 39 LLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITP 98 +LL GP G GK A+ + L + V S + Sbjct: 47 VLLAGPPGCGKTLLAKAVANE----------SGLNFISVKGPELLNMYVGESERAVRQVF 96 Query: 99 SDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCV--IINEANSLTKDAQAALRR 156 N+ VI +++ + + S + V ++ E + L Q Sbjct: 97 QRAKNSAPCVIF-----FDEVDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQV---- 147 Query: 157 TMEKYSKNIRLIMVCDSMSPIIAPIKSRCLLIR----CPAPSDSEISTILSDVVTN-ERI 211 IM + II P R + P ++ IL + N + Sbjct: 148 ----------FIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKP 197 Query: 212 QLETKDILKRIAQASNGNLR 231 L+ L+ IA G+LR Sbjct: 198 PLDADVNLEAIA----GDLR 213 >4M4W-J nrPDB Length = 317 Score = 31.4 bits (69), Expect = 0.72, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 20 EELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTAS 79 + +T+FLKS ++ + L LYG G GK A+ + + + V +FV Sbjct: 146 QHVTDFLKSYNETGKG-KGLYLYGKFGVGKTFMLAAIANELAEKEYSSMIVYVPEFVREL 204 Query: 80 NRKLE 84 L+ Sbjct: 205 KNSLQ 209 >2FZ4-A nrPDB Length = 237 Score = 31.4 bits (69), Expect = 0.72, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 36/107 (33%), Gaps = 14/107 (13%) Query: 44 PNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGN 103 P G+GK MA + + P + I V A K L + Y E + Sbjct: 116 PTGSGKTHVAMAAINELSTPTL----IVVPTLALAEQWKERLGIFGEEYVGEF-SGRIKE 170 Query: 104 NDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDA 150 + + E++ +R+ +I +E + L ++ Sbjct: 171 LKPLTVSTYDSAYVNAEKL---------GNRFMLLIFDEVHHLPAES 208 >2IUS-A nrPDB Length = 512 Score = 31.0 bits (68), Expect = 0.76, Method: Composition-based stats. Identities = 25/145 (17%), Positives = 57/145 (39%), Gaps = 13/145 (8%) Query: 7 KYR--PKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPG 64 K+R P L + + + +PHLL+ G G+G A++ S+ Sbjct: 139 KFRDNPSPLTVVLGKDIAGE---PVVADLAKMPHLLVAGTTGSGASVGVNAMILSM---- 191 Query: 65 VYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDF 124 +Y+ + + +F+ + LEL+V HL + ++ + E+ + ++ Sbjct: 192 LYKAQPEDVRFIMIDPKMLELSVYEGIPHLLTEVVTDMKDAANALRWCVNEMERRYKLMS 251 Query: 125 QDS-KDGLAHRYKCVIINEANSLTK 148 ++ + K EA+ + + Sbjct: 252 ALGVRNLAGYNEKIA---EADRMMR 273 >3JC8-Ba nrPDB Length = 566 Score = 31.0 bits (68), Expect = 0.77, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 39/96 (40%), Gaps = 3/96 (3%) Query: 26 LKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKI-DVRQFVTASNRKLE 84 K D+P + +L+ GP G+GK T + L S+ G D +F A +++ Sbjct: 306 FKEAIDRPYGM--VLVTGPTGSGKTTTLYSALSSLNGLDTNICTAEDPVEFNFAGINQVQ 363 Query: 85 LNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQME 120 ++ S + + I++ +++ E Sbjct: 364 MHDDIGLNFAAALRSFLRQDPDIIMIGEIRDFETAE 399 >3FHC-B nrPDB Length = 235 Score = 31.0 bits (68), Expect = 0.77, Method: Composition-based stats. Identities = 20/140 (14%), Positives = 53/140 (37%), Gaps = 8/140 (5%) Query: 38 HLLLYGPNGTGKKTR-CMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEI 96 +L+ +GTGK +A+L + Y + + + + ++ ++ E+ Sbjct: 66 NLIAQSQSGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFYPEL 125 Query: 97 T-PSDMGNNDRIVIQELLKEVAQMEQVDFQD----SKDGLAHRYKCVIINEANSL--TKD 149 + N Q++ +++ D K + K +++EA+ + T+ Sbjct: 126 KLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQG 185 Query: 150 AQAALRRTMEKYSKNIRLIM 169 Q R +N ++++ Sbjct: 186 HQDQSIRIQRMLPRNCQMLL 205 >1P4S-A nrPDB Length = 181 Score = 31.0 bits (68), Expect = 0.84, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 2/65 (3%) Query: 39 LLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITP 98 +LL GP G GK T+ + L E + P + ++ R + KL + ++ P Sbjct: 3 VLLLGPPGAGKGTQAVKLAEKLGIPQISTGELFRRNIEEGT--KLGVEAKRYLDAGDLVP 60 Query: 99 SDMGN 103 SD+ N Sbjct: 61 SDLTN 65 >4HSE-A nrPDB Length = 397 Score = 31.0 bits (68), Expect = 0.84, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 21/54 (38%), Gaps = 3/54 (5%) Query: 13 LNALSHNEELTNFLKSLSDQ-PRDLPHLLLYGPNGTGKKTRCMALLESIFGPGV 65 L+ + +E + + + ++ P L+ G G GK L + I V Sbjct: 32 LDPVIGRDEEIRRVIQILLRRTKNNPVLI--GEPGVGKTAIVEGLAQRIVKGDV 83 >2P65-A nrPDB Length = 187 Score = 31.0 bits (68), Expect = 0.84, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 20/50 (40%), Gaps = 3/50 (6%) Query: 9 RPKSLNALSHNEELTNF-LKSLSDQPRDLPHLLLYGPNGTGKKTRCMALL 57 R L+ + + ++ LS + ++ P LL G G GK L Sbjct: 17 RAGKLDPVIGRDTEIRRAIQILSRRTKNNPILL--GDPGVGKTAIVEGLA 64 >5E7P-A nrPDB Length = 745 Score = 31.0 bits (68), Expect = 0.86, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 12/21 (57%) Query: 39 LLLYGPNGTGKKTRCMALLES 59 +LLYGP G GK AL S Sbjct: 522 VLLYGPPGCGKTFVVRALASS 542 Score = 31.0 bits (68), Expect = 0.93, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 7/53 (13%) Query: 34 RDLPHL--LLYGPNGTGKKTRCMALLE-----SIFGPGVYRLKIDVRQFVTAS 79 PHL L+ GP G GK T A+ + GP V L++D R S Sbjct: 259 GATPHLGVLVSGPAGVGKATMVRAVCASRRVVELDGPEVGALQVDERLRSVTS 311 >6F8L-G nrPDB Length = 913 Score = 31.0 bits (68), Expect = 0.93, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 59/176 (33%), Gaps = 14/176 (7%) Query: 22 LTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKI-DVRQFVTASN 80 + K + +P + L+ GP G+GK ++L+ I P I D ++ Sbjct: 629 VFERFKEVISKPYGI--FLITGPTGSGKSFTTFSILKRIATPDKNTQTIEDPVEYEIPGI 686 Query: 81 RKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVII 140 + ++N + + + + I++ +++ + L Sbjct: 687 NQTQVNPQAGLTFARALRAFLRQDPDIIMVGEIRDSETAKIATEAALTGHLVI------- 739 Query: 141 NEANSLTKDAQAALRRTMEK--YSKNIRLIMVCDSMSPIIAPIKSRCLLIRCPAPS 194 A T DA A+ R E NI ++ ++ + C + P P Sbjct: 740 --ATLHTNDAAQAITRLDEMGVEPFNISAALIGVLSQRLVRRVCEHCKVEVKPDPE 793 >5A5B-M nrPDB Length = 434 Score = 31.0 bits (68), Expect = 0.93, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 41/118 (34%), Gaps = 14/118 (11%) Query: 40 LLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKL-----ELNVVSSPYHL 94 L+YGP GTGK A + + Q KL L +P + Sbjct: 219 LMYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTII 278 Query: 95 EITPSD---------MGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEA 143 I D + DR V + +L+ + Q++ D LA + +++ A Sbjct: 279 FIDELDAIGTKRFDSEKSGDREVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPA 336 >3CM0-A nrPDB Length = 186 Score = 31.0 bits (68), Expect = 0.93, Method: Composition-based stats. Identities = 24/147 (16%), Positives = 51/147 (34%), Gaps = 22/147 (14%) Query: 39 LLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLEL-------NVVSSP 91 ++ GP G GK T+ L + + + I + + ++V Sbjct: 7 VIFLGPPGAGKGTQASRLAQELGFKKLSTGDILRDHVARGTPLGERVRPIMERGDLVPDD 66 Query: 92 YHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDG-------------LAHRYKCV 138 LE+ ++ +R++ + +AQ E +D S+ G + + Sbjct: 67 LILELIREELA--ERVIFDGFPRTLAQAEALDRLLSETGTRLLGVVLVEVPEEELVRRIL 124 Query: 139 IINEANSLTKDAQAALRRTMEKYSKNI 165 E + D + +RR +E Y + Sbjct: 125 RRAELEGRSDDNEETVRRRLEVYREKT 151 >1FNN-A nrPDB Length = 389 Score = 31.0 bits (68), Expect = 0.93, Method: Composition-based stats. Identities = 42/244 (17%), Positives = 77/244 (31%), Gaps = 43/244 (17%) Query: 33 PRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPY 92 P L G GTGK L E +Y+ K R + Sbjct: 41 GHHYPRATLLGRPGTGKTVTLRKLWE------LYKDKTTARFVYINGFIYRNFTAIIGEI 94 Query: 93 HLEIT-PSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQ 151 + P R LL E + + Y +++++A +L D Sbjct: 95 ARSLNIPFPRRGLSRDEFLALLVEHLRERDL------------YMFLVLDDAFNLAPDIL 142 Query: 152 AALRRTMEKYSKNIRLIMV----------CDSMSPIIAPIKSRCLLIRCPAPSDSEISTI 201 + R ++ K + +++ P I + +IR + +I I Sbjct: 143 STFIRLGQEADKLGAFRIALVIVGHNDAVLNNLDPSTRGIMGK-YVIRFSPYTKDQIFDI 201 Query: 202 LSDVVTNERIQLE--TKDILKRIAQASN---------GNLRVSLLML-ESMALNNELALK 249 L D + ++DIL+ IA + G+ R+++ +L S + K Sbjct: 202 LLDRAK-AGLAEGSYSEDILQMIADITGAQTPLDTNRGDARLAIDILYRSAYAAQQNGRK 260 Query: 250 SSSP 253 +P Sbjct: 261 HIAP 264 >6B4I-E nrPDB Length = 430 Score = 30.6 bits (67), Expect = 0.96, Method: Composition-based stats. Identities = 20/140 (14%), Positives = 53/140 (37%), Gaps = 8/140 (5%) Query: 38 HLLLYGPNGTGKKTR-CMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEI 96 +L+ +GTGK +A+L + Y + + + + ++ ++ E+ Sbjct: 84 NLIAQSQSGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFYPEL 143 Query: 97 T-PSDMGNNDRIVIQELLKEVAQMEQVDFQD----SKDGLAHRYKCVIINEANSL--TKD 149 + N Q++ +++ D K + K +++EA+ + T+ Sbjct: 144 KLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQG 203 Query: 150 AQAALRRTMEKYSKNIRLIM 169 Q R +N ++++ Sbjct: 204 HQDQSIRIQRMLPRNCQMLL 223 >1G29-1 nrPDB Length = 372 Score = 30.6 bits (67), Expect = 1.0, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 50/135 (37%), Gaps = 18/135 (13%) Query: 23 TNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALL-------ESIFGPGVYRLKIDVRQF 75 ++ +S + +D ++L GP+G GK T + I+ + F Sbjct: 16 VTAVREMSLEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQIYIGDKLVADPEKGIF 75 Query: 76 VTASNRKLELNVVSSPYHLEIT-------PSDMGNNDRIVIQELLKEVAQ----MEQVDF 124 V +R + + S + +T P + R I + ++EVA+ E ++ Sbjct: 76 VPPKDRDIAMVFQSYALYPHMTVYDNIAFPLKLRKVPRQEIDQRVREVAELLGLTELLNR 135 Query: 125 QDSKDGLAHRYKCVI 139 + + R + + Sbjct: 136 KPRELSGGQRQRVAL 150 >2V1U-A nrPDB Length = 387 Score = 30.6 bits (67), Expect = 1.1, Method: Composition-based stats. Identities = 37/255 (14%), Positives = 81/255 (31%), Gaps = 30/255 (11%) Query: 4 WV--DKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIF 61 WV Y P L + + + + + LLYG GTGK +L + Sbjct: 10 WVLLPDYVPDVLPHREAELRRLAEVLAPALRGEKPSNALLYGLTGTGKTAVARLVLRRLE 69 Query: 62 GPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQ 121 + +V A +R+ V S + + ++ ++ E Sbjct: 70 ARASSLGVLVKPIYVNARHRETPYRVAS------------AIAEAVGVRVPFTGLSVGEV 117 Query: 122 VDFQDSKDGLAHRYKCVIINEANSLTK--DAQAALRRTM----EKYSKNIRLIMVCDSMS 175 + + ++++E + L K Q L R E + ++ + Sbjct: 118 YERLVKRLSRLRGIYIIVLDEIDFLPKRPGGQDLLYRITRINQELGDRVWVSLVGITNSL 177 Query: 176 PIIAPIKSRC------LLIRCPAPSDSEISTILSDVVTNE-RIQLETKDIL---KRIAQA 225 + ++ R + + P + ++ IL + D++ +A Sbjct: 178 GFVENLEPRVKSSLGEVELVFPPYTAPQLRDILETRAEEAFNPGVLDPDVVPLCAALAAR 237 Query: 226 SNGNLRVSLLMLESM 240 +G+ R +L +L Sbjct: 238 EHGDARRALDLLRVA 252 >3FMO-B nrPDB Length = 300 Score = 30.6 bits (67), Expect = 1.1, Method: Composition-based stats. Identities = 20/140 (14%), Positives = 53/140 (37%), Gaps = 8/140 (5%) Query: 38 HLLLYGPNGTGKKTR-CMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEI 96 +L+ +GTGK +A+L + Y + + + + ++ ++ E+ Sbjct: 133 NLIAQSQSGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFYPEL 192 Query: 97 T-PSDMGNNDRIVIQELLKEVAQMEQVDFQD----SKDGLAHRYKCVIINEANSL--TKD 149 + N Q++ +++ D K + K +++EA+ + T+ Sbjct: 193 KLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQG 252 Query: 150 AQAALRRTMEKYSKNIRLIM 169 Q R +N ++++ Sbjct: 253 HQDQSIRIQRMLPRNCQMLL 272 >2FWR-A nrPDB Length = 472 Score = 30.2 bits (66), Expect = 1.3, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 36/107 (33%), Gaps = 14/107 (13%) Query: 44 PNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGN 103 P G+GK MA + + P + I V A K L + Y E + Sbjct: 116 PTGSGKTHVAMAAINELSTPTL----IVVPTLALAEQWKERLGIFGEEYVGEF-SGRIKE 170 Query: 104 NDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDA 150 + + E++ +R+ +I +E + L ++ Sbjct: 171 LKPLTVSTYDSAYVNAEKL---------GNRFMLLIFDEVHHLPAES 208 >4B3F-X nrPDB Length = 646 Score = 30.2 bits (66), Expect = 1.3, Method: Composition-based stats. Identities = 7/15 (46%), Positives = 11/15 (73%) Query: 40 LLYGPNGTGKKTRCM 54 +++GP GTGK T + Sbjct: 209 IIHGPPGTGKTTTVV 223 >1IY1-A nrPDB Length = 254 Score = 30.2 bits (66), Expect = 1.4, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 21/62 (33%), Gaps = 4/62 (6%) Query: 22 LTNFLK---SLSDQPRDLPH-LLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVT 77 + FLK + +P +LL GP G GK A+ P + D + Sbjct: 31 IVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFV 90 Query: 78 AS 79 Sbjct: 91 GV 92 >6EJ5-A nrPDB Length = 637 Score = 30.2 bits (66), Expect = 1.4, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 46/127 (36%), Gaps = 11/127 (8%) Query: 37 PHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEI 96 P L+ GP GTGK ++ + G V ++ +L L++ Sbjct: 209 PLSLIQGPPGTGKTVTSATIVYHLARQG----NGPVLVCAPSNIAVDQLTEKIHQTGLKV 264 Query: 97 TPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQ---AA 153 + R I + +A Q+ DS L + + +E L+ + A Sbjct: 265 VRLCAKS--REAIDSPVSFLALHNQIRNMDSMPELQKLQQ--LKDETGELSSADEKRYRA 320 Query: 154 LRRTMEK 160 L+RT E+ Sbjct: 321 LKRTAER 327 >5WWP-B nrPDB Length = 600 Score = 30.2 bits (66), Expect = 1.4, Method: Composition-based stats. Identities = 19/133 (14%), Positives = 43/133 (32%), Gaps = 7/133 (5%) Query: 16 LSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQF 75 ++ EE + + + + ++ + GP GTGK + L I+ P + Sbjct: 258 ITVPEEFASHVANF-QKSGYSKYVTVQGPPGTGKSHFAIGLA--IYYPTARVVYTACSHA 314 Query: 76 VTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRY 135 + + ++ I P+ R+ + K Q F Sbjct: 315 AVDALCEKAFKYLNIAKCSRIIPAK----ARVECYDRFKVNETNSQYLFSTINALPETSA 370 Query: 136 KCVIINEANSLTK 148 ++++E + T Sbjct: 371 DILVVDEVSMCTN 383 >2WJV-A nrPDB Length = 800 Score = 30.2 bits (66), Expect = 1.4, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 46/127 (36%), Gaps = 11/127 (8%) Query: 37 PHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEI 96 P L+ GP GTGK ++ + G V ++ +L L++ Sbjct: 372 PLSLIQGPPGTGKTVTSATIVYHLARQG----NGPVLVCAPSNIAVDQLTEKIHQTGLKV 427 Query: 97 TPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQ---AA 153 + R I + +A Q+ DS L + + +E L+ + A Sbjct: 428 VRLCAKS--REAIDSPVSFLALHNQIRNMDSMPELQKLQQ--LKDETGELSSADEKRYRA 483 Query: 154 LRRTMEK 160 L+RT E+ Sbjct: 484 LKRTAER 490 >5A9K-A nrPDB Length = 305 Score = 30.2 bits (66), Expect = 1.5, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 3/49 (6%) Query: 17 SHNEELTNFLKSLSDQPRDLPH---LLLYGPNGTGKKTRCMALLESIFG 62 N EL F+ +L + +P L GP TGK C +L+ + G Sbjct: 104 YQNIELITFINALKLWLKGIPKKNCLAFIGPPNTGKSMLCNSLIHFLGG 152 >2GXA-A nrPDB Length = 274 Score = 30.2 bits (66), Expect = 1.5, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 3/49 (6%) Query: 17 SHNEELTNFLKSLSDQPRDLPH---LLLYGPNGTGKKTRCMALLESIFG 62 N EL F+ +L + +P L GP TGK C +L+ + G Sbjct: 101 YQNIELITFINALKLWLKGIPKKNCLAFIGPPNTGKSMLCNSLIHFLGG 149 >1Y63-A nrPDB Length = 184 Score = 30.2 bits (66), Expect = 1.5, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 41/110 (37%), Gaps = 9/110 (8%) Query: 31 DQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSS 90 +QP+ + ++L+ G GTGK + + + G + V++ + EL Sbjct: 6 EQPKGI-NILITGTPGTGKTSMAEMIAAELDGFQHLEVGKLVKENHFYTEYDTEL----- 59 Query: 91 PYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVII 140 H+ + D + E + VD+ S+ + V++ Sbjct: 60 DTHIIEEKDEDRLLDFM---EPIMVSRGNHVVDYHSSELFPERWFHMVVV 106 >5BQ5-A nrPDB Length = 189 Score = 30.2 bits (66), Expect = 1.5, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 19/57 (33%), Gaps = 3/57 (5%) Query: 28 SLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLE 84 S D+ ++ L GP G GK +++ G I V R + Sbjct: 34 SFIDRKENI---LFLGPPGIGKTHLAISIGMEAIARGYKTYFITAHDLVNQLRRADQ 87 >3JCP-I nrPDB Length = 437 Score = 30.2 bits (66), Expect = 1.5, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 24/67 (35%), Gaps = 12/67 (17%) Query: 5 VDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHL------------LLYGPNGTGKKTR 52 +DK +S + + E +K + P P L +LYG GTGK Sbjct: 173 MDKSPTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLL 232 Query: 53 CMALLES 59 A+ Sbjct: 233 AKAVANQ 239 >2BDT-A nrPDB Length = 189 Score = 30.2 bits (66), Expect = 1.6, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 44/130 (33%), Gaps = 7/130 (5%) Query: 40 LLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPS 99 ++ GP G GK T C L + I V E + + + IT Sbjct: 6 IITGPAGVGKSTTCKRLAAQLDNSAYIEGDIINHMVVGGYRPPWESDELLALTWKNITDL 65 Query: 100 DM----GNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALR 155 + ND ++ + A+ Q D + R+ + N L +D ALR Sbjct: 66 TVNFLLAQNDVVLDYIAFPDEAEALAQTVQAKVDDVEIRFIILWTNREELLRRD---ALR 122 Query: 156 RTMEKYSKNI 165 + E+ + Sbjct: 123 KKDEQMGERC 132 >2DHR-A nrPDB Length = 499 Score = 29.8 bits (65), Expect = 1.6, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 21/62 (33%), Gaps = 4/62 (6%) Query: 22 LTNFLK---SLSDQPRDLPH-LLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVT 77 + FLK + +P +LL GP G GK A+ P + D + Sbjct: 46 IVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFV 105 Query: 78 AS 79 Sbjct: 106 GV 107 >6GEJ-T nrPDB Length = 463 Score = 29.8 bits (65), Expect = 1.8, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 32/81 (39%), Gaps = 1/81 (1%) Query: 39 LLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITP 98 +LL G TGK +A+ + + GP V + + + +K E + + + + Sbjct: 75 ILLAGGPSTGKTALALAISQEL-GPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGLRI 133 Query: 99 SDMGNNDRIVIQELLKEVAQM 119 + + EL E A+ Sbjct: 134 KETKEVYEGEVTELTPEDAEN 154 >6EF1-I nrPDB Length = 271 Score = 29.8 bits (65), Expect = 1.8, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 24/67 (35%), Gaps = 12/67 (17%) Query: 5 VDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHL------------LLYGPNGTGKKTR 52 +DK +S + + E +K + P P L +LYG GTGK Sbjct: 7 MDKSPTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLL 66 Query: 53 CMALLES 59 A+ Sbjct: 67 AKAVANQ 73 >6FVU-I nrPDB Length = 384 Score = 29.8 bits (65), Expect = 2.0, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 24/67 (35%), Gaps = 12/67 (17%) Query: 5 VDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHL------------LLYGPNGTGKKTR 52 +DK +S + + E +K + P P L +LYG GTGK Sbjct: 120 MDKSPTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLL 179 Query: 53 CMALLES 59 A+ Sbjct: 180 AKAVANQ 186 >5JZV-A nrPDB Length = 206 Score = 29.8 bits (65), Expect = 2.1, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 12/22 (54%) Query: 36 LPHLLLYGPNGTGKKTRCMALL 57 LP++LL G G GK T L Sbjct: 37 LPNILLTGTPGVGKTTLGKELA 58 >3NXS-A nrPDB Length = 329 Score = 29.8 bits (65), Expect = 2.1, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 16/39 (41%) Query: 18 HNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMAL 56 H E+ L L + H+ + G G GK T AL Sbjct: 39 HREQAQQLLLDLMPEAGSAMHVGITGVPGVGKSTTIEAL 77 >2OG2-A nrPDB Length = 359 Score = 29.4 bits (64), Expect = 2.2, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 29/76 (38%), Gaps = 1/76 (1%) Query: 39 LLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITP 98 +++ G NG GK T L + G L F A++ +LE+ + + + Sbjct: 160 IMIVGVNGGGKTTSLGKLAHRLKNEGTKVLMAAGDTFRAAASDQLEIWAERTGCEI-VVA 218 Query: 99 SDMGNNDRIVIQELLK 114 V+ + +K Sbjct: 219 EGDKAKAATVLSKAVK 234 >4Z0H-O nrPDB Length = 334 Score = 29.4 bits (64), Expect = 2.3, Method: Composition-based stats. Identities = 36/263 (13%), Positives = 75/263 (28%), Gaps = 49/263 (18%) Query: 18 HNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLES----IFGPGVYRLKIDVR 73 + + +D+ + HL G KK A + + G + K D+ Sbjct: 91 GADYVVESTGVFTDKDKAAAHL-----KGGAKKVVISAPSKDAPMFVVGVNEHEYKSDLD 145 Query: 74 QFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAH 133 AS + L +D ++ + A + VD KD Sbjct: 146 IVSNAS------CTTNCLAPLAKVINDRFGIVEGLMTTVHSITATQKTVDGPSMKDWRGG 199 Query: 134 RYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKSRCLLIRCPAP 193 R + + + ++ ++ + + + P Sbjct: 200 R-------------AASFNII-------PSSTG---AAKAVGKVLPALNGKLTGMSFRVP 236 Query: 194 SDS----EISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESMALNNELALK 249 + +++ L T + I+ K I + S G L+ L E ++ + Sbjct: 237 TVDVSVVDLTVRLEKAATYDEIK-------KAIKEESEGKLKGILGYTEDDVVSTDFVGD 289 Query: 250 SSSPIIKPDWIIVIHKLTRKIVK 272 + S I I + K+V Sbjct: 290 NRSSIFDAKAGIALSDKFVKLVS 312 >5LL6-h nrPDB Length = 608 Score = 29.4 bits (64), Expect = 2.3, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 59/151 (39%), Gaps = 17/151 (11%) Query: 39 LLLYGPNGTGKKTRCMALLESIF---GPGVYRLKIDVRQF-----VTASNRKLELNVVSS 90 L++ G NGTGK T L ++ G + +L + ++ + R+L + Sbjct: 381 LVMMGENGTGKTTLIKLLAGALKPDEGQDIPKLNVSMKPQKIAPKFPGTVRQLFFKKIRG 440 Query: 91 PYHLEITPSDMGNNDRI--VIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTK 148 + +D+ RI +I + ++ ++ E + L +I+E ++ Sbjct: 441 QFLNPQFQTDVVKPLRIDDIIDQEVQHLSGGE-LQRVAIVLALGIPADIYLIDEPSAYLD 499 Query: 149 DAQA-----ALRRTMEKYSKNIRLIMVCDSM 174 Q +RR + ++K I+ D + Sbjct: 500 SEQRIICSKVIRRFI-LHNKKTAFIVEHDFI 529 >5L3R-B nrPDB Length = 293 Score = 29.4 bits (64), Expect = 2.4, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 29/76 (38%), Gaps = 1/76 (1%) Query: 39 LLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITP 98 +++ G NG GK T L + G L F A++ +LE+ + + + Sbjct: 94 IMIVGVNGGGKTTSLGKLAHRLKNEGTKVLMAAGDTFRAAASDQLEIWAERTGCEI-VVA 152 Query: 99 SDMGNNDRIVIQELLK 114 V+ + +K Sbjct: 153 EGDKAKAATVLSKAVK 168 >3HTX-A nrPDB Length = 950 Score = 29.4 bits (64), Expect = 2.4, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 53/147 (36%), Gaps = 11/147 (7%) Query: 81 RKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVII 140 L+L S ++ D + + + L Q + + +++D + R K + Sbjct: 61 CHLQLPEFSVVSNVFKKKKDSEQSAAELALDKLGIRPQNDDLTVDEARDEIVGRIKYIFS 120 Query: 141 NEA----NSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKSRCLLIRCPAPSDS 196 +E + L +AALRR E+ ++ I SRC +I SD Sbjct: 121 DEFLSAEHPLGAHLRAALRRDGERCGSVPVSVIATVDAK-----INSRCKIINPSVESDP 175 Query: 197 --EISTILSDVVTNERIQLETKDILKR 221 IS ++ + + L+R Sbjct: 176 FLAISYVMKAAAKLADYIVASPHGLRR 202 >3IIK-A nrPDB Length = 180 Score = 29.4 bits (64), Expect = 2.5, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 12/22 (54%) Query: 36 LPHLLLYGPNGTGKKTRCMALL 57 LP++LL G G GK T L Sbjct: 11 LPNILLTGTPGVGKTTLGKELA 32 >5ZFQ-A nrPDB Length = 390 Score = 29.4 bits (64), Expect = 2.5, Method: Composition-based stats. Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 2/36 (5%) Query: 25 FLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESI 60 +K L+++PR L +L+ GP G+GK T A+++ I Sbjct: 140 VVKELAEKPRGL--ILVTGPTGSGKSTTLAAIIDKI 173 >2D62-A nrPDB Length = 375 Score = 29.4 bits (64), Expect = 2.6, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 18/36 (50%) Query: 22 LTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALL 57 +K LS + +D L+L GP+G GK T + Sbjct: 18 DVTAVKDLSLEIKDGEFLVLLGPSGCGKTTTLRMIA 53 >4F4J-A nrPDB Length = 202 Score = 29.0 bits (63), Expect = 2.9, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 27/82 (32%) Query: 20 EELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTAS 79 + ++L Q +++ GP+GTGK T L + + R Sbjct: 1 DYDIPTTENLYFQGSMSRPIVISGPSGTGKSTLLKKLFAEYPDSFGFSVPSTTRTPRAGE 60 Query: 80 NRKLELNVVSSPYHLEITPSDM 101 + N VS + ++ Sbjct: 61 VNGKDYNFVSVDEFKSMIKNNE 82 >6QUZ-B nrPDB Length = 599 Score = 29.0 bits (63), Expect = 3.0, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 61/154 (39%), Gaps = 6/154 (3%) Query: 20 EELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLE--SIFGPGVYRLKIDVRQFVT 77 ++ LK ++ + + L GP G+GK T L+ + + ID+R+ Sbjct: 365 DKKKPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGIDIRKIKR 424 Query: 78 ASNR-KLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYK 136 +S R + + + + ++ + E +KE A++ D L Y+ Sbjct: 425 SSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDH--FIKHLPEGYE 482 Query: 137 CVIINEANSLTKDAQAALRRTMEKYSKNIRLIMV 170 V+ + L++ Q L + N +++++ Sbjct: 483 TVLTDNGEDLSQG-QRQLLAITRAFLANPKILIL 515 >3SR0-A nrPDB Length = 206 Score = 29.0 bits (63), Expect = 3.4, Method: Composition-based stats. Identities = 8/21 (38%), Positives = 11/21 (52%) Query: 39 LLLYGPNGTGKKTRCMALLES 59 L+ GP G GK T+ L + Sbjct: 3 LVFLGPPGAGKGTQAKRLAKE 23 >6FA9-A nrPDB Length = 655 Score = 28.7 bits (62), Expect = 3.7, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 62/163 (38%), Gaps = 4/163 (2%) Query: 11 KSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESI-FGPGVYRLK 69 +++ + + + + + D ++ L+L G G+GK T+ L + G ++ Sbjct: 22 RTIQEVRKSLPVYAYRDAFLDAVKEYQVLILVGETGSGKTTQIPQYLHEAGYTKGNRKIA 81 Query: 70 IDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKD 129 + V A + + + D + +LK + + + Sbjct: 82 CTQPRRVAAMSVAARVADEMGVRLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREMVTSP 141 Query: 130 GLAHRYKCVIINEANSLTKDAQ--AALRRTMEKYSKNIRLIMV 170 LA Y C++I+EA+ T AL + + + +RLI+ Sbjct: 142 DLAD-YSCIMIDEAHERTVHTDILLALIKDLTRARPELRLIIS 183 >6CY1-A nrPDB Length = 329 Score = 28.7 bits (62), Expect = 3.7, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 36/98 (36%), Gaps = 2/98 (2%) Query: 30 SDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLEL--NV 87 D+ + +++ G NG GK T L G+ + F A+ +L + Sbjct: 117 IDKTKKPYVIMVVGVNGVGKTTTIGKLAHQFKSEGLKVVLGAADTFRAAAVDQLVIWSER 176 Query: 88 VSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQ 125 V P + SD + +Q + + A + +D Sbjct: 177 VGVPIVKQAMGSDPASVAFDTVQSAVSQDADVVIIDTA 214 >4Q7L-A nrPDB Length = 256 Score = 28.7 bits (62), Expect = 3.9, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 79/205 (38%), Gaps = 8/205 (3%) Query: 20 EELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLE--SIFGPGVYRLKIDVRQFVT 77 ++ LK ++ + + L GP G+GK T L+ + + ID+R+ Sbjct: 15 DKKKPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGIDIRKIKR 74 Query: 78 ASNR-KLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYK 136 +S R + + + + ++ + E +KE A++ D L Y+ Sbjct: 75 SSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDH--FIKHLPEGYE 132 Query: 137 CVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPI-IAPIKS-RCLLIRCPAPS 194 V+ + L++ Q L + N +++++ ++ S + KS + + + Sbjct: 133 TVLTDNGEDLSQG-QRQLLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGK 191 Query: 195 DSEISTILSDVVTNERIQLETKDIL 219 S I + + N + + +D Sbjct: 192 TSIIIAHRLNTIKNADLIIVLRDGE 216 >2IUU-A nrPDB Length = 491 Score = 28.7 bits (62), Expect = 4.1, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 37/92 (40%), Gaps = 4/92 (4%) Query: 27 KSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELN 86 + + +PHLL+ G G+GK A+L SI +++ + + + LEL+ Sbjct: 205 RPIITDLAKMPHLLVAGTTGSGKSVGVNAMLLSI----LFKSTPSEARLIMIDPKMLELS 260 Query: 87 VVSSPYHLEITPSDMGNNDRIVIQELLKEVAQ 118 + HL ++ + E+ + Sbjct: 261 IYEGIPHLLCPVVTDMKEAANALRWSVAEMER 292 >2IUT-A nrPDB Length = 574 Score = 28.7 bits (62), Expect = 4.3, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 37/92 (40%), Gaps = 4/92 (4%) Query: 27 KSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELN 86 + + +PHLL+ G G+GK A+L SI +++ + + + LEL+ Sbjct: 205 RPIITDLAKMPHLLVAGTTGSGKSVGVNAMLLSI----LFKSTPSEARLIMIDPKMLELS 260 Query: 87 VVSSPYHLEITPSDMGNNDRIVIQELLKEVAQ 118 + HL ++ + E+ + Sbjct: 261 IYEGIPHLLCPVVTDMKEAANALRWSVAEMER 292 >4Z2C-C nrPDB Length = 269 Score = 28.3 bits (61), Expect = 4.9, Method: Composition-based stats. Identities = 35/222 (15%), Positives = 75/222 (33%), Gaps = 30/222 (13%) Query: 71 DVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDG 130 D S R E + + + D+I+ E ++ + F D Sbjct: 56 DSAGGSAKSGRNREFQAILPIRGKILNVEK-ASMDKILANEEIRSLFTAMGTGFGAEFDV 114 Query: 131 LAHRY-KCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKSRCLLIR 189 RY K V++ +A+ + L + +Y K I+ + PI Sbjct: 115 SKARYQKLVLMTDADVDGAHIRTLLLTLIYRYMKP---ILEAGYVYIAQPPI-------- 163 Query: 190 CPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESMALNNELALK 249 SEI + E I+L+ + +A+ S G + ++ + + ++ L Sbjct: 164 YGVKVGSEIKEYIQPGADQE-IKLQ-----EALARYSEGRTKPTIQRYKGLGEMDDHQLW 217 Query: 250 SSSPIIKPDWIIVIHKLTRKIVKERSVNSLIECRAVLYDLLA 291 ++ + P+ +++ SV+ E + L+ Sbjct: 218 ETT--MDPEH---------RLMARVSVDDAAEADKIFDMLMG 248 >4YMS-J nrPDB Length = 240 Score = 28.3 bits (61), Expect = 5.1, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%) Query: 13 LNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKT--RCMALLES 59 +N + N LK ++ + +++ GP+G+GK T RC+ LLE Sbjct: 4 VNDVYKNFGSLEVLKGVTLKVNKGEVVVIIGPSGSGKSTLLRCINLLEE 52 >1ODF-A nrPDB Length = 290 Score = 28.3 bits (61), Expect = 5.3, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 39/116 (33%), Gaps = 8/116 (6%) Query: 20 EELTNFLKSLSDQ----PRDLP-HLLLYGPNGTGKKTRCMALLESI---FGPGVYRLKID 71 + FL + P + GP G+GK + + + +G Sbjct: 10 DYTIEFLDKYIPEWFETGNKCPLFIFFSGPQGSGKSFTSIQIYNHLMEKYGGEKSIGYAS 69 Query: 72 VRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDS 127 + F +L+LN L G +D ++QE+L + + QD+ Sbjct: 70 IDDFYLTHEDQLKLNEQFKNNKLLQGRGLPGTHDMKLLQEVLNTIFNNNEHPDQDT 125 >3CIA-A nrPDB Length = 605 Score = 28.3 bits (61), Expect = 5.4, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 16/40 (40%) Query: 290 LAHCIPANIILKELTFSLLDVETLNTTNKSSIIEYSSVFD 329 LAH N++ E L E + ++ I+E D Sbjct: 302 LAHSWSGNLVTNESWRDLWLNEGFTSYVENRIMEAVFGTD 341 >4E22-A nrPDB Length = 252 Score = 28.3 bits (61), Expect = 5.5, Method: Composition-based stats. Identities = 12/24 (50%), Positives = 16/24 (66%) Query: 37 PHLLLYGPNGTGKKTRCMALLESI 60 P + + GP+G GK T C AL ES+ Sbjct: 28 PVITVDGPSGAGKGTLCKALAESL 51 >3EC2-A nrPDB Length = 180 Score = 28.3 bits (61), Expect = 5.6, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 25/65 (38%), Gaps = 6/65 (9%) Query: 5 VDKYRPKSLNALSHNEELTNFLKSLSDQ--PRDLPHLLLYGPNGTGKKTRCMALLESIFG 62 +D Y PK+++ ++ P + L G G GK +A L++I+ Sbjct: 9 LDTYHPKNVS----QNRALLTIRVFVHNFNPEEGKGLTFVGSPGVGKTHLAVATLKAIYE 64 Query: 63 PGVYR 67 R Sbjct: 65 KKGIR 69 >4L16-A nrPDB Length = 334 Score = 28.3 bits (61), Expect = 5.9, Method: Composition-based stats. Identities = 8/21 (38%), Positives = 11/21 (52%) Query: 39 LLLYGPNGTGKKTRCMALLES 59 +LL+GP GTGK + Sbjct: 92 VLLFGPPGTGKTMIGRCVASQ 112 >4YER-A nrPDB Length = 328 Score = 28.3 bits (61), Expect = 6.0, Method: Composition-based stats. Identities = 42/282 (14%), Positives = 89/282 (31%), Gaps = 44/282 (15%) Query: 41 LYGPNGTGKKTRCMALL--------------ESIFG-PGVYRLKIDVRQFVTASNRKLEL 85 GPNG GK T L + P R KI + + +R+L Sbjct: 36 FLGPNGAGKTTTIHMLTTLLKPTSGKAWVAGHDVLKEPREVRRKIGIVFQDQSLDRELTA 95 Query: 86 NVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKC-------- 137 + RI+ E+ + + + G+A R + Sbjct: 96 YENMYIHGKIYGYGGEKLKKRILELLEFVELLEFKDKPVKTFSGGMARRLEIARSLIHEP 155 Query: 138 --VIINEAN-SLTKDAQAALRRTMEKYSK--NIRLIMVCDSMSPIIAPIKSRCL------ 186 + ++E L +A + + K K N+ + + M + R Sbjct: 156 EVLFLDEPTIGLDPHTRAHMWEYISKMKKEHNMTIFLTTHYMDE-AEQLADRVAIIDHGK 214 Query: 187 LIRCPAPSD--SEISTILSDVVTNERIQLETKDILKRIAQASNGNLR-------VSLLML 237 +I P++ + + V +E ++ D ++ + +G L ++ + Sbjct: 215 IIALGTPTELKRMVGKEIIYVRFSEAVECLEGDFIESCRKLPDGRLELNVEDSGRAIPKI 274 Query: 238 ESMALNNELALKSSSPIIKPDWIIVIHKLTRKIVKERSVNSL 279 +A L ++ + + +H R++ +E NS Sbjct: 275 FELAQQKGLKIEEITYHKPTLNDVFLHLTGRELREEGPENSF 316 >2QZ4-A nrPDB Length = 262 Score = 27.9 bits (60), Expect = 6.5, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 4/43 (9%) Query: 21 ELTNFLKS---LSDQPRDLPH-LLLYGPNGTGKKTRCMALLES 59 E ++LKS +P LL GP G GK A+ Sbjct: 20 EFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATE 62 >4Z8X-A nrPDB Length = 497 Score = 27.9 bits (60), Expect = 6.8, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 14/41 (34%) Query: 39 LLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTAS 79 +LLYG G GK A+ P + D + Sbjct: 54 VLLYGEPGVGKTLLAKAIAGEAHVPFISVSGSDFVEMFVGV 94 >4PHT-A nrPDB Length = 500 Score = 27.9 bits (60), Expect = 6.8, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 2/37 (5%) Query: 24 NFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESI 60 + + L +P + +L+ GP G+GK T A L+ + Sbjct: 244 DNFRHLISRPHGI--ILVTGPTGSGKSTTLYAGLQEL 278 >3R8C-A nrPDB Length = 228 Score = 27.9 bits (60), Expect = 7.1, Method: Composition-based stats. Identities = 7/18 (38%), Positives = 10/18 (55%) Query: 43 GPNGTGKKTRCMALLESI 60 GP+GTGK + L + Sbjct: 11 GPSGTGKSSVAKELARQL 28 >2XZL-A nrPDB Length = 802 Score = 27.9 bits (60), Expect = 7.9, Method: Composition-based stats. Identities = 8/24 (33%), Positives = 12/24 (50%) Query: 37 PHLLLYGPNGTGKKTRCMALLESI 60 P L+ GP GTGK ++ + Sbjct: 376 PLSLIQGPPGTGKTVTSATIVYHL 399 >5IJN-C nrPDB Length = 819 Score = 27.5 bits (59), Expect = 8.1, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 6/98 (6%) Query: 237 LESMALNNELALKSSSPIIKPDWIIVIHKLTRKIVKERSVNSLIECRAVLYDLLAHCIPA 296 L +A N + L+ + ++ P +V + KER N + A I A Sbjct: 628 LYDLAKNADKVLELMNKLLSP---VVPQISAPQSNKERLKNMALSIAE---RYRAQGISA 681 Query: 297 NIILKELTFSLLDVETLNTTNKSSIIEYSSVFDERLSL 334 N + + LLD+ T S I+ + ERL L Sbjct: 682 NKFVDSTFYLLLDLITFFDEYHSGHIDRAFDIIERLKL 719 >2F03-A nrPDB Length = 269 Score = 27.5 bits (59), Expect = 8.6, Method: Composition-based stats. Identities = 18/149 (12%), Positives = 54/149 (36%), Gaps = 7/149 (4%) Query: 135 YKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIM--VCDSMSPIIAPIKSRCLLIRCPA 192 Y+ + ++E S+ K + + +++YSK + I S + + Sbjct: 5 YRELSLDELESVEKQTLRTIVQALQQYSKEAKSIFETTAADSSGEVIVLAEDITQYALEV 64 Query: 193 PSDSEISTILSDVVTNERIQ-LETKDIL--KRIAQASNGNLRVSLLMLE--SMALNNELA 247 I+ + + +R++ L + L + + + + + L+ + ++ E Sbjct: 65 AETYPINRRFAGFIDYKRVRWLPSPHGLLPQVLLVDAKASTEKNRDTLQRSQLPMDAEFR 124 Query: 248 LKSSSPIIKPDWIIVIHKLTRKIVKERSV 276 SS ++ + ++ H + + Sbjct: 125 NTSSGEVVTMEAGVIPHLMLQSANDGVLP 153 >2IHY-A nrPDB Length = 279 Score = 27.5 bits (59), Expect = 9.4, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 19/39 (48%) Query: 13 LNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKT 51 L+ + ++ LK +S Q +LYG NG GK T Sbjct: 24 LDQIGRMKQGKTILKKISWQIAKGDKWILYGLNGAGKTT 62 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.313 0.119 0.285 Lambda K H 0.267 0.0362 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,950,367 Number of Sequences: 36641 Number of extensions: 330460 Number of successful extensions: 1818 Number of sequences better than 10.0: 207 Number of HSP's better than 10.0 without gapping: 168 Number of HSP's successfully gapped in prelim test: 79 Number of HSP's that attempted gapping in prelim test: 1560 Number of HSP's gapped (non-prelim): 285 length of query: 354 length of database: 10,336,785 effective HSP length: 98 effective length of query: 256 effective length of database: 6,745,967 effective search space: 1726967552 effective search space used: 1726967552 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 59 (27.5 bits)