BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P36070 (627 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3TJ1-A nrPDB 1295 0.0 4C9K-A nrPDB 33 0.46 4PL7-A nrPDB 31 1.4 6MDN-H nrPDB 31 1.8 5K98-A nrPDB 30 2.6 5NBL-C nrPDB 30 2.8 3IAC-A nrPDB 30 4.4 4BOT-B nrPDB 29 7.8 >3TJ1-A nrPDB Length = 649 Score = 1295 bits (3350), Expect = 0.0, Method: Compositional matrix adjust. Identities = 627/627 (100%), Positives = 627/627 (100%) Query: 1 MMAFENTSKRPPQDFVAPIDQKKRKVQFSDSTGLVTLQPEEIKDEVFSAAMYSRFVKSAL 60 MMAFENTSKRPPQDFVAPIDQKKRKVQFSDSTGLVTLQPEEIKDEVFSAAMYSRFVKSAL Sbjct: 23 MMAFENTSKRPPQDFVAPIDQKKRKVQFSDSTGLVTLQPEEIKDEVFSAAMYSRFVKSAL 82 Query: 61 DDLDKNDSTQIGIIANQVALPSKNPERINDKNLNILLDILSSNINRIESSRGTFLIQSII 120 DDLDKNDSTQIGIIANQVALPSKNPERINDKNLNILLDILSSNINRIESSRGTFLIQSII Sbjct: 83 DDLDKNDSTQIGIIANQVALPSKNPERINDKNLNILLDILSSNINRIESSRGTFLIQSII 142 Query: 121 NFEKWWELPPHTLSKYIYFIKILCSSIPKWWQDVSMILVSCFILPIKQTVCHHDMLKYFL 180 NFEKWWELPPHTLSKYIYFIKILCSSIPKWWQDVSMILVSCFILPIKQTVCHHDMLKYFL Sbjct: 143 NFEKWWELPPHTLSKYIYFIKILCSSIPKWWQDVSMILVSCFILPIKQTVCHHDMLKYFL 202 Query: 181 RMIPSSMGFIDTYLAKFFPNKNDTRRKLVNYTSNLLKLRGYCSELGFQIWSLLIEKIISI 240 RMIPSSMGFIDTYLAKFFPNKNDTRRKLVNYTSNLLKLRGYCSELGFQIWSLLIEKIISI Sbjct: 203 RMIPSSMGFIDTYLAKFFPNKNDTRRKLVNYTSNLLKLRGYCSELGFQIWSLLIEKIISI 262 Query: 241 DVELQNELDELDDDVDDDDLEEVDLEDDDDLDDDSGDDDDENCGNSNEELRSGAADGSQS 300 DVELQNELDELDDDVDDDDLEEVDLEDDDDLDDDSGDDDDENCGNSNEELRSGAADGSQS Sbjct: 263 DVELQNELDELDDDVDDDDLEEVDLEDDDDLDDDSGDDDDENCGNSNEELRSGAADGSQS 322 Query: 301 DSEDMDIIEGMDGTEEYNVELTQGIKELSTKLDSILTLVSTHVEEQVTPESLESGEGVGV 360 DSEDMDIIEGMDGTEEYNVELTQGIKELSTKLDSILTLVSTHVEEQVTPESLESGEGVGV Sbjct: 323 DSEDMDIIEGMDGTEEYNVELTQGIKELSTKLDSILTLVSTHVEEQVTPESLESGEGVGV 382 Query: 361 FNTLTTLFKTHVLPTYYTRSIQYIMFHVSQQQLELMDSFLVTLIDISFAVNEAAEKKIKS 420 FNTLTTLFKTHVLPTYYTRSIQYIMFHVSQQQLELMDSFLVTLIDISFAVNEAAEKKIKS Sbjct: 383 FNTLTTLFKTHVLPTYYTRSIQYIMFHVSQQQLELMDSFLVTLIDISFAVNEAAEKKIKS 442 Query: 421 LQYLGSYIARAKKLSRTQIIFVASYLTSWLNRYVIEREEEVDQRGGMERFKHFYAAFQAL 480 LQYLGSYIARAKKLSRTQIIFVASYLTSWLNRYVIEREEEVDQRGGMERFKHFYAAFQAL Sbjct: 443 LQYLGSYIARAKKLSRTQIIFVASYLTSWLNRYVIEREEEVDQRGGMERFKHFYAAFQAL 502 Query: 481 CYIFCFRHNIFRDTDGNWECELDKFFQRMVISKFNPLKFCNENVMLMFARIAQQESVAYC 540 CYIFCFRHNIFRDTDGNWECELDKFFQRMVISKFNPLKFCNENVMLMFARIAQQESVAYC Sbjct: 503 CYIFCFRHNIFRDTDGNWECELDKFFQRMVISKFNPLKFCNENVMLMFARIAQQESVAYC 562 Query: 541 FSIIENNNNERLRGIIGKADSDKKENSAQANTTSSSWSLATRQQFIDLQSYFPYDPLFLK 600 FSIIENNNNERLRGIIGKADSDKKENSAQANTTSSSWSLATRQQFIDLQSYFPYDPLFLK Sbjct: 563 FSIIENNNNERLRGIIGKADSDKKENSAQANTTSSSWSLATRQQFIDLQSYFPYDPLFLK 622 Query: 601 NYKILMKEYYIEWSEASGEYESDGSDD 627 NYKILMKEYYIEWSEASGEYESDGSDD Sbjct: 623 NYKILMKEYYIEWSEASGEYESDGSDD 649 >4C9K-A nrPDB Length = 421 Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust. Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 4/69 (5%) Query: 59 ALDDLDKNDSTQIGIIANQVALPSKNPERINDKNLNI----LLDILSSNINRIESSRGTF 114 AL L D+T++G++AN++ PS N ++L + ++ I GT Sbjct: 167 ALAGLPVEDATKLGLLANEMTRPSGNTPEEQGRSLEAANKGFFEYVAPIIAARRGGSGTD 226 Query: 115 LIQSIINFE 123 LI I+N E Sbjct: 227 LITRILNVE 235 >4PL7-A nrPDB Length = 440 Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust. Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 11/85 (12%) Query: 334 SILTLVSTHVEEQVTPESLESGEGVGVFNTLTTLFKTHVLPTYYTRSIQYIMFHVSQQQL 393 SI ++S + + T L+SG+GV THV+P Y S+ + + + Sbjct: 135 SIQAVLSLYASGRTTGIVLDSGDGV-----------THVVPIYAGFSLPHAILRIDLAGR 183 Query: 394 ELMDSFLVTLIDISFAVNEAAEKKI 418 +L D + L + + + +AE++I Sbjct: 184 DLTDYLMKILSERGYTFSTSAEREI 208 >6MDN-H nrPDB Length = 207 Score = 30.8 bits (68), Expect = 1.8, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 50/108 (46%), Gaps = 12/108 (11%) Query: 15 FVAPIDQKK-----RKVQFSDSTGLVTLQPEEIKDEVFSAAMYSRFVKSALDD-----LD 64 F+ P ++ K +K ++ G+V QP + DE A+ F++ +D +D Sbjct: 91 FICPCNKLKSSDAYKKAWGNNQDGVVASQPARVVDEREQMAISGGFIRRVTNDARENEMD 150 Query: 65 KNDSTQIGIIAN--QVALPSKNPERINDKNLNILLDILSSNINRIESS 110 +N GII N +AL N ++ ++ +++ SN RI+ + Sbjct: 151 ENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEA 198 >5K98-A nrPDB Length = 448 Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 5/55 (9%) Query: 170 VCHHDMLKYFLRMIPSSMGFIDTYLAKFFPNKNDTRRKLVNYTSNLLKLRGYCSE 224 V H++L F RMIP+++ + T L FP T SN+L+L G S Sbjct: 394 VQMHEILSDFARMIPAALDNVKTSLPTDFPENVVT-----AVESNVLRLHGRLSR 443 >5NBL-C nrPDB Length = 375 Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust. Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 11/85 (12%) Query: 334 SILTLVSTHVEEQVTPESLESGEGVGVFNTLTTLFKTHVLPTYYTRSIQYIMFHVSQQQL 393 SI ++S + + T L+SG+GV THV+P Y S+ + + + Sbjct: 135 SIQAVLSLYSSGRTTGIVLDSGDGV-----------THVVPIYAGFSLPHAILRIDLAGR 183 Query: 394 ELMDSFLVTLIDISFAVNEAAEKKI 418 +L D + L + ++ + AE++I Sbjct: 184 DLTDYLMKILSERGYSFSTTAEREI 208 >3IAC-A nrPDB Length = 473 Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust. Identities = 12/46 (26%), Positives = 26/46 (56%) Query: 134 SKYIYFIKILCSSIPKWWQDVSMILVSCFILPIKQTVCHHDMLKYF 179 +++ YF +ILC+ + +W QD + + + Q +C ++ +YF Sbjct: 425 TRHEYFRRILCNLLGQWAQDGEIPDDEAMLSRMVQDICFNNAQRYF 470 >4BOT-B nrPDB Length = 493 Score = 28.9 bits (63), Expect = 7.8, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 15/85 (17%) Query: 9 KRPPQDFVAPIDQKKRKVQ----FSDS-------TGLVTLQPEEIKDEVFSAAMYSRFVK 57 ++P DFV P+D + VQ FS+ T VTL P+++K+ V + + ++ Sbjct: 382 RKPAGDFVCPVDNARVAVQPERLFSEMKWHLNGLTQPVTL-PQDLKEAVEAIKYIAEQLE 440 Query: 58 SA--LDDLDKNDSTQIGIIANQVAL 80 SA DDL K D + ++A+++ L Sbjct: 441 SASEFDDL-KKDWQYVAMVADRLFL 464 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3TJ1-A nrPDB 1335 0.0 Sequences not found previously or not previously below threshold: 5DFZ-D nrPDB 37 0.026 6MDN-H nrPDB 34 0.20 5ZWM-O nrPDB 32 0.66 4WSN-B nrPDB 32 0.68 6GMH-U nrPDB 32 0.86 4PL7-A nrPDB 32 1.0 5NBL-C nrPDB 31 1.6 3VSL-A nrPDB 31 1.7 4BOT-B nrPDB 31 1.7 1OED-B nrPDB 31 1.7 6FAI-l nrPDB 30 2.4 5K98-A nrPDB 30 2.7 4C9K-A nrPDB 30 3.0 4K3B-A nrPDB 30 3.3 5C6G-A nrPDB 30 4.2 3IAC-A nrPDB 30 4.2 5WLC-SS nrPDB 29 5.8 2G0U-A nrPDB 29 6.7 4GOU-A nrPDB 28 9.8 CONVERGED! >3TJ1-A nrPDB Length = 649 Score = 1335 bits (3454), Expect = 0.0, Method: Composition-based stats. Identities = 627/627 (100%), Positives = 627/627 (100%) Query: 1 MMAFENTSKRPPQDFVAPIDQKKRKVQFSDSTGLVTLQPEEIKDEVFSAAMYSRFVKSAL 60 MMAFENTSKRPPQDFVAPIDQKKRKVQFSDSTGLVTLQPEEIKDEVFSAAMYSRFVKSAL Sbjct: 23 MMAFENTSKRPPQDFVAPIDQKKRKVQFSDSTGLVTLQPEEIKDEVFSAAMYSRFVKSAL 82 Query: 61 DDLDKNDSTQIGIIANQVALPSKNPERINDKNLNILLDILSSNINRIESSRGTFLIQSII 120 DDLDKNDSTQIGIIANQVALPSKNPERINDKNLNILLDILSSNINRIESSRGTFLIQSII Sbjct: 83 DDLDKNDSTQIGIIANQVALPSKNPERINDKNLNILLDILSSNINRIESSRGTFLIQSII 142 Query: 121 NFEKWWELPPHTLSKYIYFIKILCSSIPKWWQDVSMILVSCFILPIKQTVCHHDMLKYFL 180 NFEKWWELPPHTLSKYIYFIKILCSSIPKWWQDVSMILVSCFILPIKQTVCHHDMLKYFL Sbjct: 143 NFEKWWELPPHTLSKYIYFIKILCSSIPKWWQDVSMILVSCFILPIKQTVCHHDMLKYFL 202 Query: 181 RMIPSSMGFIDTYLAKFFPNKNDTRRKLVNYTSNLLKLRGYCSELGFQIWSLLIEKIISI 240 RMIPSSMGFIDTYLAKFFPNKNDTRRKLVNYTSNLLKLRGYCSELGFQIWSLLIEKIISI Sbjct: 203 RMIPSSMGFIDTYLAKFFPNKNDTRRKLVNYTSNLLKLRGYCSELGFQIWSLLIEKIISI 262 Query: 241 DVELQNELDELDDDVDDDDLEEVDLEDDDDLDDDSGDDDDENCGNSNEELRSGAADGSQS 300 DVELQNELDELDDDVDDDDLEEVDLEDDDDLDDDSGDDDDENCGNSNEELRSGAADGSQS Sbjct: 263 DVELQNELDELDDDVDDDDLEEVDLEDDDDLDDDSGDDDDENCGNSNEELRSGAADGSQS 322 Query: 301 DSEDMDIIEGMDGTEEYNVELTQGIKELSTKLDSILTLVSTHVEEQVTPESLESGEGVGV 360 DSEDMDIIEGMDGTEEYNVELTQGIKELSTKLDSILTLVSTHVEEQVTPESLESGEGVGV Sbjct: 323 DSEDMDIIEGMDGTEEYNVELTQGIKELSTKLDSILTLVSTHVEEQVTPESLESGEGVGV 382 Query: 361 FNTLTTLFKTHVLPTYYTRSIQYIMFHVSQQQLELMDSFLVTLIDISFAVNEAAEKKIKS 420 FNTLTTLFKTHVLPTYYTRSIQYIMFHVSQQQLELMDSFLVTLIDISFAVNEAAEKKIKS Sbjct: 383 FNTLTTLFKTHVLPTYYTRSIQYIMFHVSQQQLELMDSFLVTLIDISFAVNEAAEKKIKS 442 Query: 421 LQYLGSYIARAKKLSRTQIIFVASYLTSWLNRYVIEREEEVDQRGGMERFKHFYAAFQAL 480 LQYLGSYIARAKKLSRTQIIFVASYLTSWLNRYVIEREEEVDQRGGMERFKHFYAAFQAL Sbjct: 443 LQYLGSYIARAKKLSRTQIIFVASYLTSWLNRYVIEREEEVDQRGGMERFKHFYAAFQAL 502 Query: 481 CYIFCFRHNIFRDTDGNWECELDKFFQRMVISKFNPLKFCNENVMLMFARIAQQESVAYC 540 CYIFCFRHNIFRDTDGNWECELDKFFQRMVISKFNPLKFCNENVMLMFARIAQQESVAYC Sbjct: 503 CYIFCFRHNIFRDTDGNWECELDKFFQRMVISKFNPLKFCNENVMLMFARIAQQESVAYC 562 Query: 541 FSIIENNNNERLRGIIGKADSDKKENSAQANTTSSSWSLATRQQFIDLQSYFPYDPLFLK 600 FSIIENNNNERLRGIIGKADSDKKENSAQANTTSSSWSLATRQQFIDLQSYFPYDPLFLK Sbjct: 563 FSIIENNNNERLRGIIGKADSDKKENSAQANTTSSSWSLATRQQFIDLQSYFPYDPLFLK 622 Query: 601 NYKILMKEYYIEWSEASGEYESDGSDD 627 NYKILMKEYYIEWSEASGEYESDGSDD Sbjct: 623 NYKILMKEYYIEWSEASGEYESDGSDD 649 >5DFZ-D nrPDB Length = 559 Score = 37.0 bits (84), Expect = 0.026, Method: Composition-based stats. Identities = 28/99 (28%), Positives = 53/99 (53%), Gaps = 7/99 (7%) Query: 243 ELQN--ELDELDDDVDDDDLEEVDLEDDDDLDDDSGDDDDENCGNS----NEELRSGAAD 296 E+QN +L+ +DD + D ++ +DDD+ + S +D+ GN+ N++ S +D Sbjct: 67 EIQNIKDLNLIDDKLITDSFVFLNHDDDDNANITSNSREDQRYGNANGNDNKKANSDTSD 126 Query: 297 GSQSDSEDMDIIEGMDGTEEYNVELTQGIKELSTKLDSI 335 G+ S D D E E+ N ++ K LST+++++ Sbjct: 127 GT-STFRDHDEEEQEATDEDENQQIQLNSKTLSTQVNAM 164 >6MDN-H nrPDB Length = 207 Score = 33.9 bits (76), Expect = 0.20, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 50/108 (46%), Gaps = 12/108 (11%) Query: 15 FVAPIDQKK-----RKVQFSDSTGLVTLQPEEIKDEVFSAAMYSRFVKSALDD-----LD 64 F+ P ++ K +K ++ G+V QP + DE A+ F++ +D +D Sbjct: 91 FICPCNKLKSSDAYKKAWGNNQDGVVASQPARVVDEREQMAISGGFIRRVTNDARENEMD 150 Query: 65 KNDSTQIGIIAN--QVALPSKNPERINDKNLNILLDILSSNINRIESS 110 +N GII N +AL N ++ ++ +++ SN RI+ + Sbjct: 151 ENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEA 198 >5ZWM-O nrPDB Length = 587 Score = 32.3 bits (72), Expect = 0.66, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 50/93 (53%), Gaps = 12/93 (12%) Query: 265 LEDDDDLDDDSGDDDDENCGNSNEELRSGA--ADGSQSDSEDMDIIEGMDGTEEYNVELT 322 LE+ + DD S ++ + +S+E RS G+ + E++D+ +NV+++ Sbjct: 98 LEETNVNDDSSWLENMDAIPSSHESKRSSTLPRKGATKEDENIDL---------HNVQVS 148 Query: 323 QGIKELSTKLDSILTLVSTHV-EEQVTPESLES 354 I+ LS K D+ILTL + + ++ + E LE+ Sbjct: 149 YNIEALSPKKDTILTLKESSIFDDTDSTEVLEN 181 >4WSN-B nrPDB Length = 447 Score = 32.3 bits (72), Expect = 0.68, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 73/159 (45%), Gaps = 23/159 (14%) Query: 248 LDELDDDVDDDDLEEVDLEDDDDLDDDSGDDDDENCGNSNEELRSGAADGSQSDSEDMDI 307 + +++DD DD E+ DLE +D + + + D EN +++ L+ + S + + Sbjct: 5 MSDMEDDFMCDDEEDYDLEYSEDSNSEP-NVDLENQYYNSKALKEDDPKAALSSFQKVLE 63 Query: 308 IEGMDGTEEYNVELTQGIKELSTKLDSILTLVSTHVEEQVTPESLESGEGVGVFNTLTTL 367 +EG G E+ + + + +++ KL + PE + + L T Sbjct: 64 LEGEKG--EWGFKALKQMIKINFKLTNF-------------PEMMNR------YKQLLTY 102 Query: 368 FKTHVLPTYYTRSIQYIMFHVS-QQQLELMDSFLVTLID 405 ++ V Y +SI I+ ++S +Q++L+ F T ++ Sbjct: 103 IRSAVTRNYSEKSINSILDYISTSKQMDLLQEFYETTLE 141 >6GMH-U nrPDB Length = 776 Score = 31.9 bits (71), Expect = 0.86, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 3/67 (4%) Query: 241 DVELQNELDELDDDVDDDDLEEVDLEDDDDLDDD---SGDDDDENCGNSNEELRSGAADG 297 D ++QN DE + DD+ +++ E+ + DD+ + D+DDE + +EE + + Sbjct: 292 DEKMQNTDDEERPQLSDDERQQLSEEEKANSDDERPVASDNDDEKQNSDDEEQPQLSDEE 351 Query: 298 SQSDSED 304 +S+D Sbjct: 352 KMQNSDD 358 >4PL7-A nrPDB Length = 440 Score = 31.6 bits (70), Expect = 1.0, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 11/85 (12%) Query: 334 SILTLVSTHVEEQVTPESLESGEGVGVFNTLTTLFKTHVLPTYYTRSIQYIMFHVSQQQL 393 SI ++S + + T L+SG+GV THV+P Y S+ + + + Sbjct: 135 SIQAVLSLYASGRTTGIVLDSGDGV-----------THVVPIYAGFSLPHAILRIDLAGR 183 Query: 394 ELMDSFLVTLIDISFAVNEAAEKKI 418 +L D + L + + + +AE++I Sbjct: 184 DLTDYLMKILSERGYTFSTSAEREI 208 >5NBL-C nrPDB Length = 375 Score = 31.2 bits (69), Expect = 1.6, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 11/85 (12%) Query: 334 SILTLVSTHVEEQVTPESLESGEGVGVFNTLTTLFKTHVLPTYYTRSIQYIMFHVSQQQL 393 SI ++S + + T L+SG+GV THV+P Y S+ + + + Sbjct: 135 SIQAVLSLYSSGRTTGIVLDSGDGV-----------THVVPIYAGFSLPHAILRIDLAGR 183 Query: 394 ELMDSFLVTLIDISFAVNEAAEKKI 418 +L D + L + ++ + AE++I Sbjct: 184 DLTDYLMKILSERGYSFSTTAEREI 208 >3VSL-A nrPDB Length = 646 Score = 30.8 bits (68), Expect = 1.7, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 2/93 (2%) Query: 2 MAFENTSKRPPQDFVAPIDQKKRKVQFSDSTGLVTLQPEEIKDEVFSAAMYSRFVKSALD 61 M + ++R +DF + KK K + + L IK + + + S+ KS LD Sbjct: 70 MDTKKITERDKKDFWIQLHPKKAKAMMTKEQAM--LADGSIKQDQYDKQLLSKIRKSQLD 127 Query: 62 DLDKNDSTQIGIIANQVALPSKNPERINDKNLN 94 +L D + I A +P+ I +++++ Sbjct: 128 ELSSKDLQVLAIFREMNAGTVLDPQMIKNEDVS 160 >4BOT-B nrPDB Length = 493 Score = 30.8 bits (68), Expect = 1.7, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 15/85 (17%) Query: 9 KRPPQDFVAPIDQKKRKVQ----FSDS-------TGLVTLQPEEIKDEVFSAAMYSRFVK 57 ++P DFV P+D + VQ FS+ T VTL P+++K+ V + + ++ Sbjct: 382 RKPAGDFVCPVDNARVAVQPERLFSEMKWHLNGLTQPVTL-PQDLKEAVEAIKYIAEQLE 440 Query: 58 SA--LDDLDKNDSTQIGIIANQVAL 80 SA DDL K D + ++A+++ L Sbjct: 441 SASEFDDL-KKDWQYVAMVADRLFL 464 >1OED-B nrPDB Length = 250 Score = 30.8 bits (68), Expect = 1.7, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 15/85 (17%) Query: 9 KRPPQDFVAPIDQKKRKVQ----FSDS-------TGLVTLQPEEIKDEVFSAAMYSRFVK 57 ++P DFV P+D + VQ FS+ T VTL P+++K+ V + + ++ Sbjct: 142 RKPAGDFVCPVDNARVAVQPERLFSEMKWHLNGLTQPVTL-PQDLKEAVEAIKYIAEQLE 200 Query: 58 SA--LDDLDKNDSTQIGIIANQVAL 80 SA DDL K D + ++A+++ L Sbjct: 201 SASEFDDL-KKDWQYVAMVADRLFL 224 >6FAI-l nrPDB Length = 425 Score = 30.4 bits (67), Expect = 2.4, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 9/55 (16%) Query: 244 LQNELDELDDDVDDDDLEEVDLEDD---------DDLDDDSGDDDDENCGNSNEE 289 ++N + DDD+ +D+ EE + E D +LD++S +DD E+ E Sbjct: 347 MRNAVYNSDDDMSNDEAEEENGEGDYSEEDEYYDSELDNESSEDDSEDAQEEENE 401 >5K98-A nrPDB Length = 448 Score = 30.4 bits (67), Expect = 2.7, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 5/51 (9%) Query: 173 HDMLKYFLRMIPSSMGFIDTYLAKFFPNKNDTRRKLVNYTSNLLKLRGYCS 223 H++L F RMIP+++ + T L FP T + SN+L+L G S Sbjct: 397 HEILSDFARMIPAALDNVKTSLPTDFPENVVTAVE-----SNVLRLHGRLS 442 >4C9K-A nrPDB Length = 421 Score = 30.0 bits (66), Expect = 3.0, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 4/69 (5%) Query: 59 ALDDLDKNDSTQIGIIANQVALPSKNPERINDKNLNI----LLDILSSNINRIESSRGTF 114 AL L D+T++G++AN++ PS N ++L + ++ I GT Sbjct: 167 ALAGLPVEDATKLGLLANEMTRPSGNTPEEQGRSLEAANKGFFEYVAPIIAARRGGSGTD 226 Query: 115 LIQSIINFE 123 LI I+N E Sbjct: 227 LITRILNVE 235 >4K3B-A nrPDB Length = 792 Score = 30.0 bits (66), Expect = 3.3, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 3/71 (4%) Query: 404 IDISFAVNEAAEKKIKSLQYLGSYIARAKKLSRTQIIFVASYLTSWLNRYVIEREEEVDQ 463 +DI ++E KI +++ G+ + +KL R Q+ + +WL R +R + Sbjct: 162 VDIDITIDEGKSAKITDIEFEGNQVYSDRKLMR-QMSLTEGGIWTWLTRS--DRFDRQKF 218 Query: 464 RGGMERFKHFY 474 ME+ FY Sbjct: 219 AQDMEKVTDFY 229 >5C6G-A nrPDB Length = 620 Score = 29.6 bits (65), Expect = 4.2, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Query: 216 LKLRGYCSELGFQIWSLLIEKIISIDVELQNELDELDDDVDDDDLEEVDLEDDDD 270 L+ G L Q+WSLL++ +++I ++ +N +D L D D + L+D DD Sbjct: 220 LRKAGTAIPLQLQMWSLLLDLLVAIQLD-ENIMDLLTDFKDFFSTHKDALKDGDD 273 >3IAC-A nrPDB Length = 473 Score = 29.6 bits (65), Expect = 4.2, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 27/48 (56%) Query: 132 TLSKYIYFIKILCSSIPKWWQDVSMILVSCFILPIKQTVCHHDMLKYF 179 + +++ YF +ILC+ + +W QD + + + Q +C ++ +YF Sbjct: 423 SYTRHEYFRRILCNLLGQWAQDGEIPDDEAMLSRMVQDICFNNAQRYF 470 >5WLC-SS nrPDB Length = 898 Score = 29.3 bits (64), Expect = 5.8, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 3/56 (5%) Query: 252 DDDVDDDDLEEVDLEDDD-DLDDDSGDDDDENCGNS--NEELRSGAADGSQSDSED 304 D + D+DD++ ED++ + D+ G DDD + NS ++ +R + + + ED Sbjct: 59 DTNSDEDDIDSESFEDEELNSDEALGSDDDYDILNSKFSQTIRDKKENANYQEEED 114 >2G0U-A nrPDB Length = 92 Score = 28.9 bits (63), Expect = 6.7, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 17/53 (32%) Query: 557 GKADSDKKENSAQANTTSSSWSLATRQQFIDLQSYFPYDPLFLKNYKILMKEY 609 G D +K+ AQAN T + P DP L NY+++M EY Sbjct: 28 GVKDLNKQLQDAQANLTKN-----------------PSDPTALANYQMIMSEY 63 >4GOU-A nrPDB Length = 518 Score = 28.5 bits (62), Expect = 9.8, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 39/88 (44%), Gaps = 6/88 (6%) Query: 39 PEEIKDEVFSAAMYSRFVKSALDDLDKNDSTQIGIIANQV------ALPSKNPERINDKN 92 P+++ +E A Y + + ++K ++ IG V P NP+ + Sbjct: 105 PKDVFNEAKKATEYLLYTEQYTYFINKLNANTIGTGKKDVYSLYLNQFPKTNPQPLYKPT 164 Query: 93 LNILLDILSSNINRIESSRGTFLIQSII 120 LN +++I + N E R T I+S++ Sbjct: 165 LNKIIEIEKKSWNEDEVKRNTESIKSLV 192 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.318 0.135 0.392 Lambda K H 0.267 0.0431 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,270,897 Number of Sequences: 36641 Number of extensions: 1221488 Number of successful extensions: 5165 Number of sequences better than 10.0: 80 Number of HSP's better than 10.0 without gapping: 73 Number of HSP's successfully gapped in prelim test: 94 Number of HSP's that attempted gapping in prelim test: 3664 Number of HSP's gapped (non-prelim): 723 length of query: 627 length of database: 10,336,785 effective HSP length: 103 effective length of query: 524 effective length of database: 6,562,762 effective search space: 3438887288 effective search space used: 3438887288 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 62 (28.4 bits)