BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P35914 (325 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3MP4-A nrPDB 610 e-175 2FTP-A nrPDB 365 e-101 1YDN-A nrPDB 292 1e-79 1YDO-A nrPDB 278 2e-75 3EEG-A nrPDB 68 5e-12 2NX9-A nrPDB 62 4e-10 2ZTK-A nrPDB 60 1e-09 3RMJ-A nrPDB 54 7e-08 5KS8-C nrPDB 51 6e-07 4JN6-A nrPDB 50 2e-06 3BLE-A nrPDB 49 3e-06 3IVU-A nrPDB 49 3e-06 1RR2-A nrPDB 49 4e-06 3EWB-X nrPDB 49 4e-06 4LRT-A nrPDB 43 2e-04 1NVM-A nrPDB 35 0.055 4OV4-A nrPDB 32 0.30 3TPL-A nrPDB 31 0.59 1B4N-A nrPDB 29 3.4 3G2F-A nrPDB 29 3.5 1L2L-A nrPDB 28 4.3 1PJ5-A nrPDB 27 8.4 >3MP4-A nrPDB Length = 298 Score = 610 bits (1572), Expect = e-175, Method: Compositional matrix adjust. Identities = 297/298 (99%), Positives = 297/298 (99%) Query: 28 TLPKRVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGD 87 TLPKRVKIVEVGP DGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGD Sbjct: 1 TLPKRVKIVEVGPMDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGD 60 Query: 88 HTEVLKGIQKFPGINYPVLTPNLKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESF 147 HTEVLKGIQKFPGINYPVLTPNLKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESF Sbjct: 61 HTEVLKGIQKFPGINYPVLTPNLKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESF 120 Query: 148 QRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLGDTIG 207 QRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLGDTIG Sbjct: 121 QRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLGDTIG 180 Query: 208 VGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVVDSSVAGLGGCP 267 VGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVVDSSVAGLGGCP Sbjct: 181 VGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVVDSSVAGLGGCP 240 Query: 268 YAQGASGNLATEDLVYMLEGLGIHTGVNLQKLLEAGNFICQALNRKTSSKVAQATCKL 325 YAQGASGNLATEDLVYMLEGLGIHTGVNLQKLLEAGNFICQALNRKTSSKVAQATCKL Sbjct: 241 YAQGASGNLATEDLVYMLEGLGIHTGVNLQKLLEAGNFICQALNRKTSSKVAQATCKL 298 >2FTP-A nrPDB Length = 302 Score = 365 bits (937), Expect = e-101, Method: Compositional matrix adjust. Identities = 167/290 (57%), Positives = 215/290 (74%) Query: 28 TLPKRVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGD 87 LPK+V++VEVGPRDGLQNEK + KI+L+D LS AGL IE SFVSPKWVPQM Sbjct: 4 NLPKKVRLVEVGPRDGLQNEKQPIEVADKIRLVDDLSAAGLDYIEVGSFVSPKWVPQMAG 63 Query: 88 HTEVLKGIQKFPGINYPVLTPNLKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESF 147 EV GI++ PG+ Y L PNLKGFEAA+ +G KEV +F AASE F+++NINCSI++S Sbjct: 64 SAEVFAGIRQRPGVTYAALAPNLKGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSL 123 Query: 148 QRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLGDTIG 207 +RF +L+AA+ + VRGY+SC LGCPY+G + P +VA V ++ MGCYE+SLGDTIG Sbjct: 124 ERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCYEVSLGDTIG 183 Query: 208 VGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVVDSSVAGLGGCP 267 VGT G + ++ AV EVP LA H HDTYGQALAN +L G++V DSSVAGLGGCP Sbjct: 184 VGTAGATRRLIEAVASEVPRERLAGHFHDTYGQALANIYASLLEGIAVFDSSVAGLGGCP 243 Query: 268 YAQGASGNLATEDLVYMLEGLGIHTGVNLQKLLEAGNFICQALNRKTSSK 317 YA+GA+GN+A+ED++Y+L GL IHTGV++ L++AG IC L + S+ Sbjct: 244 YAKGATGNVASEDVLYLLNGLEIHTGVDMHALVDAGQRICAVLGKSNGSR 293 >1YDN-A nrPDB Length = 295 Score = 292 bits (748), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 146/288 (50%), Positives = 201/288 (69%), Gaps = 1/288 (0%) Query: 29 LPKRVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDH 88 + + V+IVE+ RDGLQNEK V T KI LI+ LS+ G + IE TSFVSPKWVPQ+ D Sbjct: 1 MAEHVEIVEMAARDGLQNEKRFVPTADKIALINRLSDCGYARIEATSFVSPKWVPQLADS 60 Query: 89 TEVLKGIQKFPGINYPVLTPNLKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQ 148 EV+ GI++ G+ Y VL PN+KG+EAA AA A E+ +F +ASE F+K NINC+I ES + Sbjct: 61 REVMAGIRRADGVRYSVLVPNMKGYEAAAAAHADEIAVFISASEGFSKANINCTIAESIE 120 Query: 149 RFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLGDTIGV 208 R ++ AA + +++RGYVSC + CPY+G ++P VA VT++ +S+GC+E+SLGDTIG Sbjct: 121 RLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCHEVSLGDTIGR 180 Query: 209 GTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVVDSSVAGLGGCPY 268 GTP + ML AV+ P +LA H HDT G+AL N ++L+ G+ V D+SV GLGGCP+ Sbjct: 181 GTPDTVAAMLDAVLAIAPAHSLAGHYHDTGGRALDNIRVSLEKGLRVFDASVGGLGGCPF 240 Query: 269 AQGASGNLATEDLVYMLEGLGIHTGVNLQKLLEAGNFICQALNRKTSS 316 A GA GN+ T +V ML +G TG++L +L AG F QAL + ++ Sbjct: 241 APGAKGNVDTVAVVEMLHEMGFETGLDLDRLRSAGLFT-QALRQDKAA 287 >1YDO-A nrPDB Length = 307 Score = 278 bits (712), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 136/291 (46%), Positives = 180/291 (61%) Query: 30 PKRVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHT 89 PK+V I EVGPRDGLQNE ++T KI I+ LS GLS IE TSFV PKW+P + D Sbjct: 4 PKKVTIKEVGPRDGLQNEPVWIATEDKITWINQLSRTGLSYIEITSFVHPKWIPALRDAI 63 Query: 90 EVLKGIQKFPGINYPVLTPNLKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQR 149 +V KGI + G+ Y L PN +G E A+ G E +F +ASE +KNIN S ES Sbjct: 64 DVAKGIDREKGVTYAALVPNQRGLENALEGGINEACVFMSASETHNRKNINKSTSESLHI 123 Query: 150 FDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLGDTIGVG 209 + AQ AN++ R Y+S GCPYE + +V +++ + G E+SLGDTIG Sbjct: 124 LKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGISELSLGDTIGAA 183 Query: 210 TPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVVDSSVAGLGGCPYA 269 P ++ +L A++ P +A+H HDT G ALAN + ALQMG++V D S GLGGCPYA Sbjct: 184 NPAQVETVLEALLARFPANQIALHFHDTRGTALANMVTALQMGITVFDGSAGGLGGCPYA 243 Query: 270 QGASGNLATEDLVYMLEGLGIHTGVNLQKLLEAGNFICQALNRKTSSKVAQ 320 G+SGN ATED+VYMLE + I T V L+KLL A +I + + + S+ Q Sbjct: 244 PGSSGNAATEDIVYMLEQMDIKTNVKLEKLLSAAKWIEEKMGKPLPSRNLQ 294 >3EEG-A nrPDB Length = 325 Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 79/302 (26%), Positives = 131/302 (43%), Gaps = 25/302 (8%) Query: 28 TLPKRVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGD 87 +L KR+ + + RDG Q ++T KI + L E G+ VIE VS GD Sbjct: 2 SLGKRIFVFDTTLRDGEQVPGCQLNTEEKIIVAKALDELGVDVIEAGFPVSSP-----GD 56 Query: 88 HTEVLKGIQKFPGINYPVLTPNLKGFEAAVAAGAKEVVIFGAASELFTK-KNINCSIEES 146 V ++ + P + + EA + A E + F S + T + + IE Sbjct: 57 FNSV---VEITKAVTRPTICALTRAKEADINI-AGEALRFAKRSRIHTGIGSSDIHIEHK 112 Query: 147 FQRF-DAILKAAQSANISVRGYV-SCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLGD 204 + + IL+ A +A + V C G+ A +A + + G +++ D Sbjct: 113 LRSTRENILEMAVAAVKQAKKVVHEVEFFCEDAGRADQAFLARMVEAVIEAGADVVNIPD 172 Query: 205 TIGVGTPGIMKDMLSAVMQEV---PLAALAVHCHDTYGQALANTLMALQMGVSVVDSSVA 261 T G P + + +M V A L+ HCH+ G A AN+L ALQ G V+ ++ Sbjct: 173 TTGYMLPWQYGERIKYLMDNVSNIDKAILSAHCHNDLGLATANSLAALQNGARQVECTIN 232 Query: 262 GLGGCPYAQGASGNLATEDLVYML----EGLGIHTGVNLQKLLEAGNFICQALNRKTSSK 317 G+G +GN A E++V + E LG+ TG+N +KL+ + + + + S Sbjct: 233 GIG------ERAGNTALEEVVMAMECHKETLGLETGINHKKLVPISHLVSTLMRMQVQSN 286 Query: 318 VA 319 A Sbjct: 287 KA 288 >2NX9-A nrPDB Length = 464 Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 37/113 (32%), Positives = 64/113 (56%), Gaps = 7/113 (6%) Query: 187 EVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTL 246 +V ++ +G I+L D G+ TP ++++S + ++V + L +HCH T G A L Sbjct: 162 DVAQQLAELGVDSIALKDMAGILTPYAAEELVSTLKKQVDVE-LHLHCHSTAGLADMTLL 220 Query: 247 MALQMGVSVVDSSVAGLGGCPYAQGASGNLATEDLVYMLEGLGIHTGVNLQKL 299 A++ GV VD++++ + G G+ ATE LV L+G G TG+++ KL Sbjct: 221 KAIEAGVDRVDTAISSMSGT------YGHPATESLVATLQGTGYDTGLDIAKL 267 >2ZTK-A nrPDB Length = 382 Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 65/241 (26%), Positives = 110/241 (45%), Gaps = 23/241 (9%) Query: 31 KRVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTE 90 + KI++ R+G Q EK ST K+++ L E G+ IE T+ P PQ E Sbjct: 2 REWKIIDSTLREGEQFEKANFSTQDKVEIAKALDEFGIEYIEVTT---PVASPQSRKDAE 58 Query: 91 VLKGIQKFPGINYPVLTP---NLKGFEAAVAAGAKEV-VIFGAASELFTK--KNINCSIE 144 VL + G+ V+T L + AV G + + ++FG + L ++I IE Sbjct: 59 VLASL----GLKAKVVTHIQCRLDAAKVAVETGVQGIDLLFGTSKYLRAPHGRDIPRIIE 114 Query: 145 ESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLGD 204 E+ + I +AA ++ VR + ++ V E + + L D Sbjct: 115 EAKEVIAYIREAA--PHVEVRFSAEDTFRSEEQDLLA---VYEAVAPYVD----RVGLAD 165 Query: 205 TIGVGTPGIMKDMLSAVMQEV-PLAALAVHCHDTYGQALANTLMALQMGVSVVDSSVAGL 263 T+GV TP + ++ V + V P + H H+ G A+AN A++ G + VD+++ G+ Sbjct: 166 TVGVATPRQVYALVREVRRVVGPRVDIEFHGHNDTGCAIANAYEAIEAGATHVDTTILGI 225 Query: 264 G 264 G Sbjct: 226 G 226 >3RMJ-A nrPDB Length = 370 Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 71/293 (24%), Positives = 123/293 (41%), Gaps = 33/293 (11%) Query: 28 TLPKRVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIET-TSFVSPKWVPQMG 86 T RV I + RDG Q+ ++ KI++ L + G+ +IE + SP G Sbjct: 8 TQTNRVIIFDTTLRDGEQSPGAAMTKEEKIRVARQLEKLGVDIIEAGFAAASP------G 61 Query: 87 DHTEV---LKGIQKFP--GINYPVLTPNLKGFEAAVAAGAKEVVIFGAASELFTKKNINC 141 D V K I K ++ + + EA A K + F A S + + + Sbjct: 62 DFEAVNAIAKTITKSTVCSLSRAIERDIRQAGEAVAPAPKKRIHTFIATSPIHMEYKLKM 121 Query: 142 SIEESFQRFDAILKAAQSANISVRGYVS-CALGCPYEGKISPAKVAEVTKKFYSMGCYEI 200 + Q +A +KA + A R Y C + +AE+ G I Sbjct: 122 KPK---QVIEAAVKAVKIA----REYTDDVEFSCEDALRSEIDFLAEICGAVIEAGATTI 174 Query: 201 SLGDTIGVGTPGIMKDMLSAVMQEVPLAALAV---HCHDTYGQALANTLMALQMGVSVVD 257 ++ DT+G P ++ ++ + P V HCH+ G A+AN+L AL+ G V+ Sbjct: 175 NIPDTVGYSIPYKTEEFFRELIAKTPNGGKVVWSAHCHNDLGLAVANSLAALKGGARQVE 234 Query: 258 SSVAGLGGCPYAQGASGNLATEDLVYML----EGLGIHTGVNLQKLLEAGNFI 306 +V GLG +GN + E++V L + G+ TG++ +++ + + Sbjct: 235 CTVNGLG------ERAGNASVEEIVMALKVRHDLFGLETGIDTTQIVPSSKLV 281 >5KS8-C nrPDB Length = 617 Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 19/183 (10%) Query: 134 FTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKIS----PAK----V 185 F +K+ + I+ F+ FDA+ N+ V A+G EG IS P Sbjct: 101 FVQKSADNGID-VFRIFDAM---NDLRNLKVSIESVKAVGKHAEGTISYTTSPVHDIPYF 156 Query: 186 AEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANT 245 + K+ S GC I++ D + TP + D++ A+ + V L + +H H T G A + Sbjct: 157 VNLAKELESFGCDTIAIKDMASLLTPQVTGDLVKALREAVSLP-IHLHAHATSGLASMSI 215 Query: 246 LMALQMGVSVVDSSVAGLGGCPYAQGASGNLATEDLVYMLEGLGIHTGVNLQKLLEAGNF 305 A+ GV++VD ++ +A+GAS ATE +V L+G TG+++ L E + Sbjct: 216 QRAVDNGVAIVDGCISS-----FAEGASLP-ATESIVAALKGTEYDTGLDIGLLQEISAY 269 Query: 306 ICQ 308 + Sbjct: 270 FRE 272 >4JN6-A nrPDB Length = 346 Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 64/288 (22%), Positives = 123/288 (42%), Gaps = 39/288 (13%) Query: 33 VKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVL 92 V+I + RDG ++++ + ++ L AG+ VIE T H + L Sbjct: 7 VRITDTSLRDGSHHKRHQFTKDEVGAIVAALDAAGVPVIEVT-------------HGDGL 53 Query: 93 KGIQKFPGINYPV-LTPNLKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFD 151 G NY TP + + A A + + F + TK +I +E+ Sbjct: 54 GG----SSFNYGFSKTPEQELIKLAAATAKEARIAFLMLPGVGTKDDI----KEARDNGG 105 Query: 152 AILKAAQ---SANISVRGY-VSCALGCPYEG------KISPAKVAEVTKKFYSMGCYEIS 201 +I + A A++S++ + ++ LG G I+P K+A + GC + Sbjct: 106 SICRIATHCTEADVSIQHFGLARELGLETVGFLMMAHTIAPEKLAAQARIMADAGCQCVY 165 Query: 202 LGDTIGVGTPGIMKDMLSAVMQEV-PLAALAVHCHDTYGQALANTLMALQMGVSVVDSSV 260 + D+ G + D +SA++ E+ A + H H+ G +AN++ A++ G +D Sbjct: 166 VVDSAGALVLDGVADRVSALVAELGEDAQVGFHGHENLGLGVANSVAAVRAGAKQID--- 222 Query: 261 AGLGGCPYAQGASGNLATEDLVYMLEGLGIHTGVNLQKLLEAGNFICQ 308 G C +GN E L+ + + +G+ TG++ + +A + + Sbjct: 223 ---GSCRRFGAGAGNAPVEALIGVFDKIGVKTGIDFFDIADAAEDVVR 267 >3BLE-A nrPDB Length = 337 Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 56/261 (21%), Positives = 109/261 (41%), Gaps = 31/261 (11%) Query: 19 RAVSTSSMGTLPKRVKIVEVGPRDGLQNEKNIVSTPVKIKLID-MLSEAGLSVIETTSFV 77 R+ S M + R++I++V RDG Q ST K+ + +L + + +E S Sbjct: 6 RSQKVSQMTKVETRLEILDVTLRDGEQTRGVSFSTSEKLNIAKFLLQKLNVDRVEIASAR 65 Query: 78 SPK-----------W--VPQMGDHTEVLKGIQKFPGINYPVLTPNLKGFEAAVAAGAKEV 124 K W Q+ + E+L + +++ +GAK + Sbjct: 66 VSKGELETVQKIMEWAATEQLTERIEILGFVDGNKTVDW------------IKDSGAKVL 113 Query: 125 VIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYV-SCALGCPYEGKISPA 183 + S +K + + +E F +++ A + + + Y+ + G + SP Sbjct: 114 NLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSNGF----RNSPD 169 Query: 184 KVAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALA 243 V + + I L DT+GV +P + +++Q+ P H H+ Y ++A Sbjct: 170 YVKSLVEHLSKEHIERIFLPDTLGVLSPEETFQGVDSLIQKYPDIHFEFHGHNDYDLSVA 229 Query: 244 NTLMALQMGVSVVDSSVAGLG 264 N+L A++ GV + +S+ GLG Sbjct: 230 NSLQAIRAGVKGLHASINGLG 250 >3IVU-A nrPDB Length = 423 Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 54/233 (23%), Positives = 94/233 (40%), Gaps = 17/233 (7%) Query: 35 IVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKG 94 I+E R+G Q T KI++ L G+ IE TS V+ + Q + Sbjct: 42 IIESTLREGEQFANAFFDTEKKIQIAKALDNFGVDYIELTSPVASEQSRQD------CEA 95 Query: 95 IQKFPGINYPVLTP---NLKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFD 151 I K G+ +LT ++ AV G V + S+ K + + Sbjct: 96 ICKL-GLKCKILTHIRCHMDDARVAVETGVDGVDVVIGTSQYLRKYSHGKDMTYIIDSAT 154 Query: 152 AILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLGDTIGVGTP 211 ++ +S I VR + +S K + +G + + DT+G TP Sbjct: 155 EVINFVKSKGIEVRFSSEDSFRSDLVDLLSLYKAVD------KIGVNRVGIADTVGCATP 208 Query: 212 GIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVVDSSVAGLG 264 + D++ ++ V + H H+ G A+AN AL+ G + +D+S+ G+G Sbjct: 209 RQVYDLIR-TLRGVVSCDIECHFHNDTGMAIANAYCALEAGATHIDTSILGIG 260 >1RR2-A nrPDB Length = 539 Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 11/125 (8%) Query: 180 ISPAKVAE----VTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEV-PLAALAVHC 234 ISP E + + MG I+L D + P D++ A+ + +HC Sbjct: 168 ISPVHTVEGYVKLAGQLLDMGADSIALKDMAALLKPQPAYDIIKAIKDTYGQKTQINLHC 227 Query: 235 HDTYGQALANTLMALQMGVSVVDSSVAGLGGCPYAQGASGNLATEDLVYMLEGLGIHTGV 294 H T G + + A++ GV VVD++++ + P G+ TE + MLEG G T + Sbjct: 228 HSTTGVTEVSLMKAIEAGVDVVDTAISSMSLGP------GHNPTESVAEMLEGTGYTTNL 281 Query: 295 NLQKL 299 + +L Sbjct: 282 DYDRL 286 >3EWB-X nrPDB Length = 293 Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 64/276 (23%), Positives = 107/276 (38%), Gaps = 49/276 (17%) Query: 31 KRVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTE 90 K+++ + RDG Q KI++ L + G+ VIE +S GD E Sbjct: 4 KKIQFFDTTLRDGEQTPGVNFDVKEKIQIALQLEKLGIDVIEAGFPISSP-----GDF-E 57 Query: 91 VLKGIQK------FPGINYPVLTPNLKGFEAAVAAGAKEVVIFGAASELFTKKNINCS-- 142 +K I K G+ V + EA A + ++ IF A S++ + + S Sbjct: 58 CVKAIAKAIKHCSVTGLARCVEGDIDRAEEALKDAVSPQIHIFLATSDVHMEYKLKMSRA 117 Query: 143 ---------IEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFY 193 I + Q+FD + + + A S R ++ E + Sbjct: 118 EVLASIKHHISYARQKFDVVQFSPEDATRSDRAFL-----------------IEAVQTAI 160 Query: 194 SMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAA---LAVHCHDTYGQALANTLMALQ 250 G I++ DT+G P + + +E+ A HCHD G A AN L A++ Sbjct: 161 DAGATVINIPDTVGYTNPTEFGQLFQDLRREIKQFDDIIFASHCHDDLGMATANALAAIE 220 Query: 251 MGVSVVDSSVAGLGGCPYAQGASGNLATEDLVYMLE 286 G V+ ++ G+G +GN A E++ L Sbjct: 221 NGARRVEGTINGIG------ERAGNTALEEVAVALH 250 >4LRT-A nrPDB Length = 355 Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 7/120 (5%) Query: 179 KISPAKVAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEV-PLAALAVHCHDT 237 +I P ++A + G + + D+ G ++ + A+++E+ A + H H Sbjct: 149 RIGPEELARQARIMVDAGAQCVYVVDSAGALVLSDVQARVQALVREIGHEAQVGFHGHQN 208 Query: 238 YGQALANTLMALQMGVSVVDSSVAGLGGCPYAQGASGNLATEDLVYMLEGLGIHTGVNLQ 297 +AN+++A Q G +D ++ LG +GN TE L E L I TGVN+Q Sbjct: 209 LSLGVANSVLAYQNGARQIDGALCALGA------GAGNSPTEILAATFERLNIETGVNVQ 262 >1NVM-A nrPDB Length = 345 Score = 34.7 bits (78), Expect = 0.055, Method: Compositional matrix adjust. Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 7/135 (5%) Query: 180 ISPAKVAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEV-PLAALAVHCHDTY 238 I K+AE K S G I + D+ G + ++D + A + P + +H H Sbjct: 146 IPAEKLAEQGKLMESYGATCIYMADSGGAMSMNDIRDRMRAFKAVLKPETQVGMHAHHNL 205 Query: 239 GQALANTLMALQMGVSVVDSSVAGLGGCPYAQGASGNLATEDLVYMLEGLGIHTGVNLQK 298 +AN+++A++ G VD+S+AG +GN E + + E LG + G +L Sbjct: 206 SLGVANSIVAVEEGCDRVDASLAG------MGAGAGNAPLEVFIAVAERLGWNHGTDLYT 259 Query: 299 LLEAGNFICQALNRK 313 L++A + I + L + Sbjct: 260 LMDAADDIVRPLQDR 274 >4OV4-A nrPDB Length = 414 Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust. Identities = 24/114 (21%), Positives = 51/114 (44%), Gaps = 7/114 (6%) Query: 196 GCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAAL-AVHCHDTYGQALANTLMALQMGVS 254 G I+L +T+ P + +M+ + V A+ ++H H+ G A A ++ ++ +G Sbjct: 189 GANIINLPNTVERYRPMVFVNMVKEIKDVVKDKAIISIHTHNDLGMATATSVESVYVGAE 248 Query: 255 VVDSSVAGLGGCPYAQGASGNLATEDLVYMLEGLGIHTGVNLQKLLEAGNFICQ 308 ++ ++ GLG +GN + L G + +N Q++ I + Sbjct: 249 QIEVALNGLG------ERAGNTNLYETAIALHQNGENLNINFQRIYPTAKRISE 296 >3TPL-A nrPDB Length = 433 Score = 31.2 bits (69), Expect = 0.59, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 13/87 (14%) Query: 228 AALAVHCHDTYGQALANTLMALQMGVSVVDSSVAGLGGCPYAQGA-SGNLATEDLVYMLE 286 AA H Y + L++T L+ GV V PY QGA +G L T DLV + Sbjct: 82 AAPHPFLHRYYQRQLSSTYRDLRKGVYV-----------PYTQGAWAGELGT-DLVSIPH 129 Query: 287 GLGIHTGVNLQKLLEAGNFICQALNRK 313 G + N+ + E+ F N + Sbjct: 130 GPNVTVRANIAAITESDKFFINGSNWE 156 >1B4N-A nrPDB Length = 619 Score = 28.9 bits (63), Expect = 3.4, Method: Compositional matrix adjust. Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 14/113 (12%) Query: 202 LGDTIGVGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVVDSSVA 261 LG +G+G + +L+ + E+ + +++ G ++A+ + A++ G+ + Sbjct: 313 LGSNLGIGKLNEV-SVLNRIADEMGMDTISL------GVSIAHVMEAVERGILKEGPTFG 365 Query: 262 GLGGCP-------YAQGASGNLATEDLVYMLEGLGIHTGVNLQKLLEAGNFIC 307 G Y +G GNLA E + M E LG H K LE + C Sbjct: 366 DFKGAKQLALDIAYRKGELGNLAAEGVKAMAEKLGTHDFAMHVKGLEVSGYNC 418 >3G2F-A nrPDB Length = 336 Score = 28.9 bits (63), Expect = 3.5, Method: Compositional matrix adjust. Identities = 15/44 (34%), Positives = 19/44 (43%) Query: 12 LVGLASLRAVSTSSMGTLPKRVKIVEVGPRDGLQNEKNIVSTPV 55 L+G AV S+ P VK+ R NEKNI P+ Sbjct: 20 LIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPL 63 >1L2L-A nrPDB Length = 457 Score = 28.5 bits (62), Expect = 4.3, Method: Compositional matrix adjust. Identities = 61/251 (24%), Positives = 96/251 (38%), Gaps = 68/251 (27%) Query: 95 IQKFPGINYPVLTPNLKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAIL 154 I +FP N+ VL FEA +E GAA + I EE +RF+ I Sbjct: 181 IYEFPR-NFKVLD-----FEAP-----RENRFIGAADDY---NPILYVREEWIERFEEIA 226 Query: 155 KAAQSANIS----------------VRGYV----SCALGCPYEGKISPAKVAEVT----- 189 K ++ A IS VR ++ + E +P +V + Sbjct: 227 KRSELAIISGLHPLTQENHGKPIKLVREHLKILNDLGIRAHLEFAFTPDEVVRLEIVKLL 286 Query: 190 KKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAALAV----------------H 233 K FYS+G E+ L + V K++ ++ + P +AV H Sbjct: 287 KHFYSVGLNEVELASVVSVMGE---KELAERIISKDPADPIAVIEGLLKLIKETGVKRIH 343 Query: 234 CHDTYGQALANTLMALQMGVSVVDSSVAGLGGCPYAQGASGNLATEDLVYMLEGLGI--- 290 H TYG LA + + G V D+ + + GN+ E L + EGL + Sbjct: 344 FH-TYGYYLA---LTREKGEHVRDALLFSALAA-ATKAMKGNI--EKLSDIREGLAVPIG 396 Query: 291 HTGVNLQKLLE 301 G+ ++K+LE Sbjct: 397 EQGLEVEKILE 407 >1PJ5-A nrPDB Length = 830 Score = 27.3 bits (59), Expect = 8.4, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 10/98 (10%) Query: 181 SPAKVAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQ 240 SP AE K ++ Y+++ + V PG +K ++QE+ A LA Sbjct: 486 SPIAAAEAWKTRTAVAMYDMTPLKRLEVSGPGALK-----LLQELTTADLAKKP-----G 535 Query: 241 ALANTLMALQMGVSVVDSSVAGLGGCPYAQGASGNLAT 278 A+ TL+ G D +VA L + GA+GN+ T Sbjct: 536 AVTYTLLLDHAGGVRSDITVARLSEDTFQLGANGNIDT 573 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3MP4-A nrPDB 398 e-111 1YDO-A nrPDB 346 6e-96 2FTP-A nrPDB 342 1e-94 1YDN-A nrPDB 309 1e-84 3EEG-A nrPDB 250 6e-67 3BLE-A nrPDB 238 2e-63 3RMJ-A nrPDB 237 6e-63 3EWB-X nrPDB 221 3e-58 3IVU-A nrPDB 215 1e-56 4JN6-A nrPDB 196 9e-51 2ZTK-A nrPDB 196 1e-50 4LRT-A nrPDB 156 2e-38 2NX9-A nrPDB 142 2e-34 5KS8-C nrPDB 142 2e-34 1RR2-A nrPDB 130 6e-31 Sequences not found previously or not previously below threshold: 4OV4-A nrPDB 126 1e-29 1NVM-A nrPDB 114 6e-26 3HPX-A nrPDB 66 2e-11 3HQ1-A nrPDB 63 1e-10 2QS8-A nrPDB 36 0.029 3TYZ-A nrPDB 34 0.088 2G3M-A nrPDB 32 0.24 5LHE-A nrPDB 31 0.55 2BKL-A nrPDB 31 0.72 1Z82-A nrPDB 31 0.86 5JBH-F nrPDB 30 1.3 1F05-A nrPDB 30 1.3 3NWR-A nrPDB 30 1.4 4NU7-A nrPDB 30 1.5 3WQO-A nrPDB 30 1.5 5EMU-A nrPDB 30 1.6 4AY7-A nrPDB 29 2.4 2D6F-C nrPDB 29 2.4 2E1D-A nrPDB 29 2.9 4YNZ-A nrPDB 29 3.5 4GMM-A nrPDB 29 3.7 4E0B-A nrPDB 28 6.6 2G76-A nrPDB 28 6.8 1IE3-A nrPDB 27 8.9 >3MP4-A nrPDB Length = 298 Score = 398 bits (1022), Expect = e-111, Method: Composition-based stats. Identities = 297/298 (99%), Positives = 297/298 (99%) Query: 28 TLPKRVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGD 87 TLPKRVKIVEVGP DGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGD Sbjct: 1 TLPKRVKIVEVGPMDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGD 60 Query: 88 HTEVLKGIQKFPGINYPVLTPNLKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESF 147 HTEVLKGIQKFPGINYPVLTPNLKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESF Sbjct: 61 HTEVLKGIQKFPGINYPVLTPNLKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESF 120 Query: 148 QRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLGDTIG 207 QRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLGDTIG Sbjct: 121 QRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLGDTIG 180 Query: 208 VGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVVDSSVAGLGGCP 267 VGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVVDSSVAGLGGCP Sbjct: 181 VGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVVDSSVAGLGGCP 240 Query: 268 YAQGASGNLATEDLVYMLEGLGIHTGVNLQKLLEAGNFICQALNRKTSSKVAQATCKL 325 YAQGASGNLATEDLVYMLEGLGIHTGVNLQKLLEAGNFICQALNRKTSSKVAQATCKL Sbjct: 241 YAQGASGNLATEDLVYMLEGLGIHTGVNLQKLLEAGNFICQALNRKTSSKVAQATCKL 298 >1YDO-A nrPDB Length = 307 Score = 346 bits (888), Expect = 6e-96, Method: Composition-based stats. Identities = 136/291 (46%), Positives = 180/291 (61%) Query: 30 PKRVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHT 89 PK+V I EVGPRDGLQNE ++T KI I+ LS GLS IE TSFV PKW+P + D Sbjct: 4 PKKVTIKEVGPRDGLQNEPVWIATEDKITWINQLSRTGLSYIEITSFVHPKWIPALRDAI 63 Query: 90 EVLKGIQKFPGINYPVLTPNLKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQR 149 +V KGI + G+ Y L PN +G E A+ G E +F +ASE +KNIN S ES Sbjct: 64 DVAKGIDREKGVTYAALVPNQRGLENALEGGINEACVFMSASETHNRKNINKSTSESLHI 123 Query: 150 FDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLGDTIGVG 209 + AQ AN++ R Y+S GCPYE + +V +++ + G E+SLGDTIG Sbjct: 124 LKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGISELSLGDTIGAA 183 Query: 210 TPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVVDSSVAGLGGCPYA 269 P ++ +L A++ P +A+H HDT G ALAN + ALQMG++V D S GLGGCPYA Sbjct: 184 NPAQVETVLEALLARFPANQIALHFHDTRGTALANMVTALQMGITVFDGSAGGLGGCPYA 243 Query: 270 QGASGNLATEDLVYMLEGLGIHTGVNLQKLLEAGNFICQALNRKTSSKVAQ 320 G+SGN ATED+VYMLE + I T V L+KLL A +I + + + S+ Q Sbjct: 244 PGSSGNAATEDIVYMLEQMDIKTNVKLEKLLSAAKWIEEKMGKPLPSRNLQ 294 >2FTP-A nrPDB Length = 302 Score = 342 bits (876), Expect = 1e-94, Method: Composition-based stats. Identities = 167/290 (57%), Positives = 215/290 (74%) Query: 28 TLPKRVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGD 87 LPK+V++VEVGPRDGLQNEK + KI+L+D LS AGL IE SFVSPKWVPQM Sbjct: 4 NLPKKVRLVEVGPRDGLQNEKQPIEVADKIRLVDDLSAAGLDYIEVGSFVSPKWVPQMAG 63 Query: 88 HTEVLKGIQKFPGINYPVLTPNLKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESF 147 EV GI++ PG+ Y L PNLKGFEAA+ +G KEV +F AASE F+++NINCSI++S Sbjct: 64 SAEVFAGIRQRPGVTYAALAPNLKGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSL 123 Query: 148 QRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLGDTIG 207 +RF +L+AA+ + VRGY+SC LGCPY+G + P +VA V ++ MGCYE+SLGDTIG Sbjct: 124 ERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCYEVSLGDTIG 183 Query: 208 VGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVVDSSVAGLGGCP 267 VGT G + ++ AV EVP LA H HDTYGQALAN +L G++V DSSVAGLGGCP Sbjct: 184 VGTAGATRRLIEAVASEVPRERLAGHFHDTYGQALANIYASLLEGIAVFDSSVAGLGGCP 243 Query: 268 YAQGASGNLATEDLVYMLEGLGIHTGVNLQKLLEAGNFICQALNRKTSSK 317 YA+GA+GN+A+ED++Y+L GL IHTGV++ L++AG IC L + S+ Sbjct: 244 YAKGATGNVASEDVLYLLNGLEIHTGVDMHALVDAGQRICAVLGKSNGSR 293 >1YDN-A nrPDB Length = 295 Score = 309 bits (790), Expect = 1e-84, Method: Composition-based stats. Identities = 146/288 (50%), Positives = 201/288 (69%), Gaps = 1/288 (0%) Query: 29 LPKRVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDH 88 + + V+IVE+ RDGLQNEK V T KI LI+ LS+ G + IE TSFVSPKWVPQ+ D Sbjct: 1 MAEHVEIVEMAARDGLQNEKRFVPTADKIALINRLSDCGYARIEATSFVSPKWVPQLADS 60 Query: 89 TEVLKGIQKFPGINYPVLTPNLKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQ 148 EV+ GI++ G+ Y VL PN+KG+EAA AA A E+ +F +ASE F+K NINC+I ES + Sbjct: 61 REVMAGIRRADGVRYSVLVPNMKGYEAAAAAHADEIAVFISASEGFSKANINCTIAESIE 120 Query: 149 RFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLGDTIGV 208 R ++ AA + +++RGYVSC + CPY+G ++P VA VT++ +S+GC+E+SLGDTIG Sbjct: 121 RLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCHEVSLGDTIGR 180 Query: 209 GTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVVDSSVAGLGGCPY 268 GTP + ML AV+ P +LA H HDT G+AL N ++L+ G+ V D+SV GLGGCP+ Sbjct: 181 GTPDTVAAMLDAVLAIAPAHSLAGHYHDTGGRALDNIRVSLEKGLRVFDASVGGLGGCPF 240 Query: 269 AQGASGNLATEDLVYMLEGLGIHTGVNLQKLLEAGNFICQALNRKTSS 316 A GA GN+ T +V ML +G TG++L +L AG F QAL + ++ Sbjct: 241 APGAKGNVDTVAVVEMLHEMGFETGLDLDRLRSAGLFT-QALRQDKAA 287 >3EEG-A nrPDB Length = 325 Score = 250 bits (638), Expect = 6e-67, Method: Composition-based stats. Identities = 79/302 (26%), Positives = 131/302 (43%), Gaps = 25/302 (8%) Query: 28 TLPKRVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGD 87 +L KR+ + + RDG Q ++T KI + L E G+ VIE VS GD Sbjct: 2 SLGKRIFVFDTTLRDGEQVPGCQLNTEEKIIVAKALDELGVDVIEAGFPVSSP-----GD 56 Query: 88 HTEVLKGIQKFPGINYPVLTPNLKGFEAAVAAGAKEVVIFGAASELFTK-KNINCSIEES 146 V ++ + P + + EA + A E + F S + T + + IE Sbjct: 57 FNSV---VEITKAVTRPTICALTRAKEADINI-AGEALRFAKRSRIHTGIGSSDIHIEHK 112 Query: 147 FQRF-DAILKAAQSANISVRGYV-SCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLGD 204 + + IL+ A +A + V C G+ A +A + + G +++ D Sbjct: 113 LRSTRENILEMAVAAVKQAKKVVHEVEFFCEDAGRADQAFLARMVEAVIEAGADVVNIPD 172 Query: 205 TIGVGTPGIMKDMLSAVMQEV---PLAALAVHCHDTYGQALANTLMALQMGVSVVDSSVA 261 T G P + + +M V A L+ HCH+ G A AN+L ALQ G V+ ++ Sbjct: 173 TTGYMLPWQYGERIKYLMDNVSNIDKAILSAHCHNDLGLATANSLAALQNGARQVECTIN 232 Query: 262 GLGGCPYAQGASGNLATEDLVYML----EGLGIHTGVNLQKLLEAGNFICQALNRKTSSK 317 G+G +GN A E++V + E LG+ TG+N +KL+ + + + + S Sbjct: 233 GIG------ERAGNTALEEVVMAMECHKETLGLETGINHKKLVPISHLVSTLMRMQVQSN 286 Query: 318 VA 319 A Sbjct: 287 KA 288 >3BLE-A nrPDB Length = 337 Score = 238 bits (607), Expect = 2e-63, Method: Composition-based stats. Identities = 65/316 (20%), Positives = 126/316 (39%), Gaps = 38/316 (12%) Query: 19 RAVSTSSMGTLPKRVKIVEVGPRDGLQNEKNIVSTPVKIKLID-MLSEAGLSVIETTSFV 77 R+ S M + R++I++V RDG Q ST K+ + +L + + +E S Sbjct: 6 RSQKVSQMTKVETRLEILDVTLRDGEQTRGVSFSTSEKLNIAKFLLQKLNVDRVEIASAR 65 Query: 78 SPK-------------WVPQMGDHTEVLKGIQKFPGINYPVLTPNLKGFEAAVAAGAKEV 124 K Q+ + E+L + +++ +GAK + Sbjct: 66 VSKGELETVQKIMEWAATEQLTERIEILGFVDGNKTVDW------------IKDSGAKVL 113 Query: 125 VIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVS-CALGCPYEGKISPA 183 + S +K + + +E F +++ A + + + Y+ + G + SP Sbjct: 114 NLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSNGF----RNSPD 169 Query: 184 KVAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALA 243 V + + I L DT+GV +P + +++Q+ P H H+ Y ++A Sbjct: 170 YVKSLVEHLSKEHIERIFLPDTLGVLSPEETFQGVDSLIQKYPDIHFEFHGHNDYDLSVA 229 Query: 244 NTLMALQMGVSVVDSSVAGLGGCPYAQGASGNLATEDLVYMLE-GLGIHTGVNLQKLLEA 302 N+L A++ GV + +S+ GLG +GN E LV + T +N + EA Sbjct: 230 NSLQAIRAGVKGLHASINGLG------ERAGNTPLEALVTTIHDKSNSKTNINEIAITEA 283 Query: 303 GNFICQALNRKTSSKV 318 + ++ S+ Sbjct: 284 SRLVEVFSGKRISANR 299 >3RMJ-A nrPDB Length = 370 Score = 237 bits (603), Expect = 6e-63, Method: Composition-based stats. Identities = 68/305 (22%), Positives = 120/305 (39%), Gaps = 31/305 (10%) Query: 28 TLPKRVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGD 87 T RV I + RDG Q+ ++ KI++ L + G+ +IE + GD Sbjct: 8 TQTNRVIIFDTTLRDGEQSPGAAMTKEEKIRVARQLEKLGVDIIEAGFAAASP-----GD 62 Query: 88 HTEV---LKGIQKFP--GINYPVLTPNLKGFEAAVAAGAKEVVIFGAASELFTKKNINCS 142 V K I K ++ + + EA A K + F A S + + + Sbjct: 63 FEAVNAIAKTITKSTVCSLSRAIERDIRQAGEAVAPAPKKRIHTFIATSPIHMEYKLKMK 122 Query: 143 IEESFQRFDAILKAAQSANISVRGYVSC-ALGCPYEGKISPAKVAEVTKKFYSMGCYEIS 201 + +++AA A R Y C + +AE+ G I+ Sbjct: 123 PK-------QVIEAAVKAVKIAREYTDDVEFSCEDALRSEIDFLAEICGAVIEAGATTIN 175 Query: 202 LGDTIGVGTPGIMKDMLSAVMQEVPLAALAV---HCHDTYGQALANTLMALQMGVSVVDS 258 + DT+G P ++ ++ + P V HCH+ G A+AN+L AL+ G V+ Sbjct: 176 IPDTVGYSIPYKTEEFFRELIAKTPNGGKVVWSAHCHNDLGLAVANSLAALKGGARQVEC 235 Query: 259 SVAGLGGCPYAQGASGNLATEDLVYML----EGLGIHTGVNLQKLLEAGNFICQALNRKT 314 +V GLG +GN + E++V L + G+ TG++ +++ + + Sbjct: 236 TVNGLG------ERAGNASVEEIVMALKVRHDLFGLETGIDTTQIVPSSKLVSTITGYPV 289 Query: 315 SSKVA 319 A Sbjct: 290 QPNKA 294 >3EWB-X nrPDB Length = 293 Score = 221 bits (562), Expect = 3e-58, Method: Composition-based stats. Identities = 57/294 (19%), Positives = 104/294 (35%), Gaps = 19/294 (6%) Query: 31 KRVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTE 90 K+++ + RDG Q KI++ L + G+ VIE +S + Sbjct: 4 KKIQFFDTTLRDGEQTPGVNFDVKEKIQIALQLEKLGIDVIEAGFPISSPGDFECVKAIA 63 Query: 91 VLKGIQKFPGINYPVLTPNLKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRF 150 G+ V + EA A + ++ IF A S++ + + S E Sbjct: 64 KAIKHCSVTGLARCVEGDIDRAEEALKDAVSPQIHIFLATSDVHMEYKLKMSRAEVLASI 123 Query: 151 DAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLGDTIGVGT 210 + A+ + + + A + E + G I++ DT+G Sbjct: 124 KHHISYAR------QKFDVVQFSPEDATRSDRAFLIEAVQTAIDAGATVINIPDTVGYTN 177 Query: 211 PGIMKDMLSAVMQEVPLAA---LAVHCHDTYGQALANTLMALQMGVSVVDSSVAGLGGCP 267 P + + +E+ A HCHD G A AN L A++ G V+ ++ G+G Sbjct: 178 PTEFGQLFQDLRREIKQFDDIIFASHCHDDLGMATANALAAIENGARRVEGTINGIG--- 234 Query: 268 YAQGASGNLATEDLVYMLEG----LGIHTGVNLQKLLEAGNFICQALNRKTSSK 317 +GN A E++ L T + L + + + I + Sbjct: 235 ---ERAGNTALEEVAVALHIRKDFYQAETNIVLNQFKNSSDLISRLSGMPVPRN 285 >3IVU-A nrPDB Length = 423 Score = 215 bits (548), Expect = 1e-56, Method: Composition-based stats. Identities = 62/290 (21%), Positives = 109/290 (37%), Gaps = 26/290 (8%) Query: 35 IVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKG 94 I+E R+G Q T KI++ L G+ IE TS V+ + Q + Sbjct: 42 IIESTLREGEQFANAFFDTEKKIQIAKALDNFGVDYIELTSPVASEQSRQD------CEA 95 Query: 95 IQKFPGINYPVLTP---NLKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFD 151 I K G+ +LT ++ AV G V + S+ K + + Sbjct: 96 ICKL-GLKCKILTHIRCHMDDARVAVETGVDGVDVVIGTSQYLRKYSHGKDMTYIIDSAT 154 Query: 152 AILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLGDTIGVGTP 211 ++ +S I VR + +S K + +G + + DT+G TP Sbjct: 155 EVINFVKSKGIEVRFSSEDSFRSDLVDLLSLYKAVD------KIGVNRVGIADTVGCATP 208 Query: 212 GIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVVDSSVAGLGGCPYAQG 271 + D++ + + V + H H+ G A+AN AL+ G + +D+S+ G+G Sbjct: 209 RQVYDLIRTL-RGVVSCDIECHFHNDTGMAIANAYCALEAGATHIDTSILGIG------E 261 Query: 272 ASGNLATEDLVYMLEGLG---IHTGVNLQKLLEAGNFICQALNRKTSSKV 318 +G L+ + I L +L E N + A+ + Sbjct: 262 RNGITPLGALLARMYVTDREYITHKYKLNQLRELENLVADAVEVQIPFNN 311 >4JN6-A nrPDB Length = 346 Score = 196 bits (499), Expect = 9e-51, Method: Composition-based stats. Identities = 63/287 (21%), Positives = 123/287 (42%), Gaps = 37/287 (12%) Query: 33 VKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVL 92 V+I + RDG ++++ + ++ L AG+ VIE T H + L Sbjct: 7 VRITDTSLRDGSHHKRHQFTKDEVGAIVAALDAAGVPVIEVT-------------HGDGL 53 Query: 93 KGIQKFPGINYPVLTPNLKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDA 152 G G + TP + + A A + + F + TK + I+E+ + Sbjct: 54 GGSSFNYGFS---KTPEQELIKLAAATAKEARIAFLMLPGVGTKDD----IKEARDNGGS 106 Query: 153 ILKAA---QSANISVRGY-VSCALGCPYEG------KISPAKVAEVTKKFYSMGCYEISL 202 I + A A++S++ + ++ LG G I+P K+A + GC + + Sbjct: 107 ICRIATHCTEADVSIQHFGLARELGLETVGFLMMAHTIAPEKLAAQARIMADAGCQCVYV 166 Query: 203 GDTIGVGTPGIMKDMLSAVMQEV-PLAALAVHCHDTYGQALANTLMALQMGVSVVDSSVA 261 D+ G + D +SA++ E+ A + H H+ G +AN++ A++ G +D Sbjct: 167 VDSAGALVLDGVADRVSALVAELGEDAQVGFHGHENLGLGVANSVAAVRAGAKQID---- 222 Query: 262 GLGGCPYAQGASGNLATEDLVYMLEGLGIHTGVNLQKLLEAGNFICQ 308 G C +GN E L+ + + +G+ TG++ + +A + + Sbjct: 223 --GSCRRFGAGAGNAPVEALIGVFDKIGVKTGIDFFDIADAAEDVVR 267 >2ZTK-A nrPDB Length = 382 Score = 196 bits (497), Expect = 1e-50, Method: Composition-based stats. Identities = 70/295 (23%), Positives = 123/295 (41%), Gaps = 26/295 (8%) Query: 31 KRVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTE 90 + KI++ R+G Q EK ST K+++ L E G+ IE T+ V+ PQ E Sbjct: 2 REWKIIDSTLREGEQFEKANFSTQDKVEIAKALDEFGIEYIEVTTPVAS---PQSRKDAE 58 Query: 91 VLKGIQKFPGINYPVLTPNL---KGFEAAVAAGAKEVVIFGAASELFT---KKNINCSIE 144 VL + G+ V+T + AV G + + + S+ ++I IE Sbjct: 59 VLASL----GLKAKVVTHIQCRLDAAKVAVETGVQGIDLLFGTSKYLRAPHGRDIPRIIE 114 Query: 145 ESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLGD 204 E+ + I +AA ++ VR + ++ V E + + L D Sbjct: 115 EAKEVIAYIREAA--PHVEVRFSAEDTFRSEEQDLLA---VYEAVAPYVD----RVGLAD 165 Query: 205 TIGVGTPGIMKDMLSAVMQEV-PLAALAVHCHDTYGQALANTLMALQMGVSVVDSSVAGL 263 T+GV TP + ++ V + V P + H H+ G A+AN A++ G + VD+++ G+ Sbjct: 166 TVGVATPRQVYALVREVRRVVGPRVDIEFHGHNDTGCAIANAYEAIEAGATHVDTTILGI 225 Query: 264 GGCPYAQGASGNLATEDLVYMLEGLGIHTGVNLQKLLEAGNFICQALNRKTSSKV 318 G G LA +Y L+ + L+ L E + + + + Sbjct: 226 GERNGITPLGGFLAR---MYTLQPEYVRRKYKLEMLPELDRMVARMVGVEIPFNN 277 >4LRT-A nrPDB Length = 355 Score = 156 bits (393), Expect = 2e-38, Method: Composition-based stats. Identities = 61/290 (21%), Positives = 110/290 (37%), Gaps = 31/290 (10%) Query: 27 GTLPKRVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMG 86 T RV+I + RDG + + + L AG+ VIE + Sbjct: 7 ATAAPRVRITDSTLRDGSHAMAHQFTEEQVRATVHALDAAGVEVIEVS------------ 54 Query: 87 DHTEVLKGIQKFPGINYPVLTPNLKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEES 146 H + L G G + + AAV + + T +++ + ++ Sbjct: 55 -HGDGLGGSSFNYGFSA---VDEIDLVAAAVDEAVNAKIAVLLLPGVGTVRDLKRA-HDA 109 Query: 147 FQRFDAILKAAQSANISVRGYVS-CALGCPYEG------KISPAKVAEVTKKFYSMGCYE 199 I A++S + + + LG G +I P ++A + G Sbjct: 110 GASVARIATHCTEADVSCQHFAAARELGMETVGFLMLAHRIGPEELARQARIMVDAGAQC 169 Query: 200 ISLGDTIGVGTPGIMKDMLSAVMQEV-PLAALAVHCHDTYGQALANTLMALQMGVSVVDS 258 + + D+ G ++ + A+++E+ A + H H +AN+++A Q G +D Sbjct: 170 VYVVDSAGALVLSDVQARVQALVREIGHEAQVGFHGHQNLSLGVANSVLAYQNGARQIDG 229 Query: 259 SVAGLGGCPYAQGASGNLATEDLVYMLEGLGIHTGVNLQKLLEAGNFICQ 308 ++ LG +GN TE L E L I TGVN+Q L A + + Sbjct: 230 ALCALGA------GAGNSPTEILAATFERLNIETGVNVQAALAAAEEVVR 273 >2NX9-A nrPDB Length = 464 Score = 142 bits (357), Expect = 2e-34, Method: Composition-based stats. Identities = 64/301 (21%), Positives = 119/301 (39%), Gaps = 35/301 (11%) Query: 26 MGTLPKRVKIVEVGPRDGLQNEKNI-VSTPVKIKLIDMLSEAGLSVIET-TSFVSPKWVP 83 M KRV + +V RD Q+ + + + L + G +E + Sbjct: 1 MTQAIKRVGVTDVVLRDAHQSLFATRLRIDDMLPIAQQLDQIGYWSLECWGGATFDSCIR 60 Query: 84 QMGD----HTEVLKGIQKFPGINYPVLTPNLKGFEAAVAAGAKEVVIFGAASELFTKKNI 139 +G+ +LK + + NL G+ F ++ + Sbjct: 61 FLGEDPWQRLRLLKQAMPNTPLQMLLRGQNLLGYRHYADDVVD----------TFVERAV 110 Query: 140 NCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKI----SPAK----VAEVTKK 191 ++ F+ FDA+ N+ +G +G + SP +V ++ Sbjct: 111 KNGMD-VFRVFDAM---NDVRNMQQALQAVKKMGAHAQGTLCYTTSPVHNLQTWVDVAQQ 166 Query: 192 FYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQM 251 +G I+L D G+ TP ++++S + ++V L +HCH T G A L A++ Sbjct: 167 LAELGVDSIALKDMAGILTPYAAEELVSTLKKQV-DVELHLHCHSTAGLADMTLLKAIEA 225 Query: 252 GVSVVDSSVAGLGGCPYAQGASGNLATEDLVYMLEGLGIHTGVNLQKLLEAGNFICQALN 311 GV VD++++ + G G+ ATE LV L+G G TG+++ KL + + Sbjct: 226 GVDRVDTAISSMSGT------YGHPATESLVATLQGTGYDTGLDIAKLEQIAAYFRDVRK 279 Query: 312 R 312 + Sbjct: 280 K 280 >5KS8-C nrPDB Length = 617 Score = 142 bits (357), Expect = 2e-34, Method: Composition-based stats. Identities = 65/303 (21%), Positives = 114/303 (37%), Gaps = 51/303 (16%) Query: 32 RVKIVEVGPRDGLQNEKNI-VSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTE 90 +V + +V RDG Q+ + T + + L G +E Sbjct: 3 KVHVTDVVLRDGHQSLIATRMRTDDMLPICSKLDAVGYWSLEA----------------- 45 Query: 91 VLKGIQKFPGINYPVLTPNLKGFEAAVAAGAKEVVIFGAAS-------------ELFTKK 137 G + Y P + + A + + F +K Sbjct: 46 -WGGATFDACVRYLREDPWERLKKLRKALPNSRLQMLLRGQNLLGYRHYSDDVVRAFVQK 104 Query: 138 NINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKIS--------PAKVAEVT 189 + + I+ F+ FDA+ N+ V A+G EG IS + Sbjct: 105 SADNGID-VFRIFDAM---NDLRNLKVSIESVKAVGKHAEGTISYTTSPVHDIPYFVNLA 160 Query: 190 KKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMAL 249 K+ S GC I++ D + TP + D++ A+ + V L + +H H T G A + A+ Sbjct: 161 KELESFGCDTIAIKDMASLLTPQVTGDLVKALREAVSLP-IHLHAHATSGLASMSIQRAV 219 Query: 250 QMGVSVVDSSVAGLGGCPYAQGASGNLATEDLVYMLEGLGIHTGVNLQKLLEAGNFICQA 309 GV++VD ++ +A+GAS ATE +V L+G TG+++ L E + + Sbjct: 220 DNGVAIVDGCISS-----FAEGASLP-ATESIVAALKGTEYDTGLDIGLLQEISAYFREV 273 Query: 310 LNR 312 + Sbjct: 274 RKK 276 >1RR2-A nrPDB Length = 539 Score = 130 bits (327), Expect = 6e-31, Method: Composition-based stats. Identities = 60/304 (19%), Positives = 112/304 (36%), Gaps = 30/304 (9%) Query: 7 ALPRRLVGL-ASLRAVSTSSMGTLPKRVKIVEVGPRDGLQNEKNI-VSTPVKIKLIDMLS 64 A+ R LV +S R + S P+ V I E+ RD Q+ ++ + + Sbjct: 2 AISRELVDPNSSPREIEVSE----PREVGITELVLRDAHQSLMATRMAMEDMVGACADID 57 Query: 65 EAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKFPGINYPVLTPNLKGFEAAVAAGAKEV 124 AG +E W D ++ + + P + + + + Sbjct: 58 AAGYWSVEC-------WGGATYDS--CIRFLNEDPWERLRTFRKLMPNSRLQMLLRGQNL 108 Query: 125 VIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKI---- 180 + + ++ + ++ S E F N++ G +G I Sbjct: 109 LGYRHYNDEVVDRFVDKSAENGMDVFRVFDAMNDPRNMAHAMAAVKKAGKHAQGTICYTI 168 Query: 181 SPAKVAE----VTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEV-PLAALAVHCH 235 SP E + + MG I+L D + P D++ A+ + +HCH Sbjct: 169 SPVHTVEGYVKLAGQLLDMGADSIALKDMAALLKPQPAYDIIKAIKDTYGQKTQINLHCH 228 Query: 236 DTYGQALANTLMALQMGVSVVDSSVAGLGGCPYAQGASGNLATEDLVYMLEGLGIHTGVN 295 T G + + A++ GV VVD++++ + P G+ TE + MLEG G T ++ Sbjct: 229 STTGVTEVSLMKAIEAGVDVVDTAISSMSLGP------GHNPTESVAEMLEGTGYTTNLD 282 Query: 296 LQKL 299 +L Sbjct: 283 YDRL 286 >4OV4-A nrPDB Length = 414 Score = 126 bits (317), Expect = 1e-29, Method: Composition-based stats. Identities = 59/294 (20%), Positives = 107/294 (36%), Gaps = 17/294 (5%) Query: 30 PKRVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHT 89 PK + I +V RDG Q K + KI++ D+L E + IE S + Sbjct: 23 PKTIHIQDVTLRDGNQALKRPWTIDEKIEVFDLLVELNVDGIEVGFPSSNETEFHTCQVL 82 Query: 90 EVLKGIQK-FPGINYPVLTPNLKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQ 148 K ++ +EA A + I S+ K + S +E Q Sbjct: 83 SKRAPKGKPIAALSRANQNEIAVTWEAIQKADCPRMHIVYPVSDFSIKHVLKISEKEVLQ 142 Query: 149 RFDAILKAAQS---ANISVRGYVSCALGCPYEGKISP-AKVAEVTKKFYSMGCYEISLGD 204 + + A+S I ++ G + I A E G I+L + Sbjct: 143 KIRNSISFARSIVGPGIEIQFS-----GEHFGDAIENFAFTKEAFLTAIEAGANIINLPN 197 Query: 205 TIGVGTPGIMKDMLSAVMQEV-PLAALAVHCHDTYGQALANTLMALQMGVSVVDSSVAGL 263 T+ P + +M+ + V A +++H H+ G A A ++ ++ +G ++ ++ GL Sbjct: 198 TVERYRPMVFVNMVKEIKDVVKDKAIISIHTHNDLGMATATSVESVYVGAEQIEVALNGL 257 Query: 264 GGCPYAQGASGNLATEDLVYMLEGLGIHTGVNLQKLLEAGNFICQALNRKTSSK 317 G +GN + L G + +N Q++ I + K Sbjct: 258 G------ERAGNTNLYETAIALHQNGENLNINFQRIYPTAKRISELTGIPIGEK 305 >1NVM-A nrPDB Length = 345 Score = 114 bits (285), Expect = 6e-26, Method: Composition-based stats. Identities = 59/303 (19%), Positives = 114/303 (37%), Gaps = 32/303 (10%) Query: 31 KRVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTE 90 K++ I +V RDG ++ + + L +A + IE H + Sbjct: 7 KKLYISDVTLRDGSHAIRHQYTLDDVRAIARALDKAKVDSIEVA-------------HGD 53 Query: 91 VLKGIQKFPGINYPVLTP-NLKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQR 149 L+G NY +L+ EA + + + + ++ + + + Sbjct: 54 GLQG----SSFNYGFGRHTDLEYIEAVAGEISHAQIATLLLPGIGSVHDLKNAYQAGARV 109 Query: 150 FDAILKAAQSANISVRGYVSCALGCPYEG------KISPAKVAEVTKKFYSMGCYEISLG 203 ++ + LG G I K+AE K S G I + Sbjct: 110 VRVATHCTEADVSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESYGATCIYMA 169 Query: 204 DTIGVGTPGIMKDMLSAVMQEV-PLAALAVHCHDTYGQALANTLMALQMGVSVVDSSVAG 262 D+ G + ++D + A + P + +H H +AN+++A++ G VD+S+A Sbjct: 170 DSGGAMSMNDIRDRMRAFKAVLKPETQVGMHAHHNLSLGVANSIVAVEEGCDRVDASLA- 228 Query: 263 LGGCPYAQGASGNLATEDLVYMLEGLGIHTGVNLQKLLEAGNFICQALNRKTSSKVAQAT 322 +GN E + + E LG + G +L L++A + I + L + +V + T Sbjct: 229 -----GMGAGAGNAPLEVFIAVAERLGWNHGTDLYTLMDAADDIVRPL-QDRPVRVDRET 282 Query: 323 CKL 325 L Sbjct: 283 LGL 285 >3HPX-A nrPDB Length = 425 Score = 66.4 bits (160), Expect = 2e-11, Method: Composition-based stats. Identities = 50/299 (16%), Positives = 94/299 (31%), Gaps = 31/299 (10%) Query: 38 VGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDH-TEVLKGIQ 96 V RDG Q + +S K ++ D+L G IE + + D E+++ Sbjct: 77 VDLRDGNQALIDPMSPARKRRMFDLLVRMGYKEIEVGFPSASQ---TDFDFVREIIEQGA 133 Query: 97 KFPGINYPVLTP-----NLKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFD 151 + VLT + F+A A V + + S L + + E Sbjct: 134 IPDDVTIQVLTQCRPELIERTFQACSGAPRAIVHFYNSTSILQRRVVFRANRAEVQAIAT 193 Query: 152 AILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEI----------S 201 A+ Y Y + E K+ I + Sbjct: 194 ---DGARKCVEQAAKYPGTQWRFEYSPESYTGTELEYAKQVCDAVGEVIAPTPERPIIFN 250 Query: 202 LGDTIGVGTPGIMKDMLSAVMQEV---PLAALAVHCHDTYGQALANTLMALQMGVSVVDS 258 L T+ + TP + D + + + + L++H H+ G A+A + G ++ Sbjct: 251 LPATVEMTTPNVYADSIEWMSRNLANRESVILSLHPHNDRGTAVAAAELGFAAGADRIEG 310 Query: 259 SVAGLGGCPYAQGASGNLATEDLVYMLEGLGIHTGVNLQKLLEAGNFICQALNRKTSSK 317 + G G +GN+ L L G+ ++ + E + + Sbjct: 311 CLFGNG------ERTGNVCLVTLGLNLFSRGVDPQIDFSNIDEIRRTVEYCNQLPVHER 363 >3HQ1-A nrPDB Length = 644 Score = 63.3 bits (152), Expect = 1e-10, Method: Composition-based stats. Identities = 50/299 (16%), Positives = 94/299 (31%), Gaps = 31/299 (10%) Query: 38 VGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDH-TEVLKGIQ 96 V RDG Q + +S K ++ D+L G IE + + D E+++ Sbjct: 77 VDLRDGNQALIDPMSPARKRRMFDLLVRMGYKEIEVGFPSASQ---TDFDFVREIIEQGA 133 Query: 97 KFPGINYPVLTP-----NLKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFD 151 + VLT + F+A A V + + S L + + E Sbjct: 134 IPDDVTIQVLTQCRPELIERTFQACSGAPRAIVHFYNSTSILQRRVVFRANRAEVQAIAT 193 Query: 152 AILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEI----------S 201 A+ Y Y + E K+ I + Sbjct: 194 ---DGARKCVEQAAKYPGTQWRFEYSPESYTGTELEYAKQVCDAVGEVIAPTPERPIIFN 250 Query: 202 LGDTIGVGTPGIMKDMLSAVMQEV---PLAALAVHCHDTYGQALANTLMALQMGVSVVDS 258 L T+ + TP + D + + + + L++H H+ G A+A + G ++ Sbjct: 251 LPATVEMTTPNVYADSIEWMSRNLANRESVILSLHPHNDRGTAVAAAELGFAAGADRIEG 310 Query: 259 SVAGLGGCPYAQGASGNLATEDLVYMLEGLGIHTGVNLQKLLEAGNFICQALNRKTSSK 317 + G G +GN+ L L G+ ++ + E + + Sbjct: 311 CLFGNG------ERTGNVCLVTLGLNLFSRGVDPQIDFSNIDEIRRTVEYCNQLPVHER 363 >2QS8-A nrPDB Length = 418 Score = 35.6 bits (80), Expect = 0.029, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 32/87 (36%), Gaps = 14/87 (16%) Query: 180 ISPAKVAEVTKKFYSMGCYEISLGDTIGVG-------TPGIMKDMLSAVMQEVPLAA--L 230 P +V ++ Y G I + T GV P ++ + AV+ + Sbjct: 173 NGPYEVYAAVRQRYKDGADGIKITVTGGVLSVAKSGQNPQFTQEEVDAVVSAAKDYGMWV 232 Query: 231 AVHCHDTYGQALANTLMALQMGVSVVD 257 AVH H G A++ GV ++ Sbjct: 233 AVHAHGAEGMK-----RAIKAGVDSIE 254 >3TYZ-A nrPDB Length = 280 Score = 34.0 bits (76), Expect = 0.088, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 2/84 (2%) Query: 205 TIGVGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVVDSSVAGLG 264 T T + + + ++ P + CH+ QAL + L G +++D + G Sbjct: 7 TARGLTLDLSRPQVMGILNVTPDSFSDGGCHNNLDQALQHAQRMLSAGATLID--IGGES 64 Query: 265 GCPYAQGASGNLATEDLVYMLEGL 288 P A S + +V ++E L Sbjct: 65 TRPGAAEVSEQEELDRVVPVVEAL 88 >2G3M-A nrPDB Length = 693 Score = 32.5 bits (72), Expect = 0.24, Method: Composition-based stats. Identities = 17/115 (14%), Positives = 34/115 (29%), Gaps = 4/115 (3%) Query: 43 GLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKFPGIN 102 G KI LSE GL++++ + V + + +H L +K ++ Sbjct: 18 GEPFPPIEFPLEQKISSNKSLSELGLTIVQQGNKVIVEKSLDLKEHIIGLG--EKAFELD 75 Query: 103 YPVLTPNLKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAA 157 + + A K + LF + F ++ Sbjct: 76 RKRKRYVM--YNVDAGAYKKYQDPLYVSIPLFISVKDGVATGYFFNSASKVIFDV 128 >5LHE-A nrPDB Length = 207 Score = 31.3 bits (69), Expect = 0.55, Method: Composition-based stats. Identities = 15/99 (15%), Positives = 33/99 (33%), Gaps = 2/99 (2%) Query: 58 KLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKFPGINYPVLTPNLKGFEAAV 117 + + + + G I+ S + PK V ++ D V + K + P Sbjct: 64 EWANAVEKTGAEYIQVHSDMHPKAVNRLKDEYGV--SVMKAFMVPRESDDPAEDAERLLE 121 Query: 118 AAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKA 156 G EV + + + + + + + I+ A Sbjct: 122 LIGQYEVDKILLDTGVGSGRRHDYRVSAIIAKEYPIVLA 160 >2BKL-A nrPDB Length = 695 Score = 31.0 bits (68), Expect = 0.72, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 30/86 (34%), Gaps = 11/86 (12%) Query: 68 LSVIETTSFVSPKWVPQMGDH------TEVLKGIQKFPGINYPVLTPNLKGFEAAVAAGA 121 + VIE + +PKW P T+ + + PG Y + + G E + Sbjct: 162 VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPG--YTTIRYHTLGTEPSKDTVV 219 Query: 122 KEVVIFGAASELFTKKNINCSIEESF 147 E F + +++ + F Sbjct: 220 HER---TGDPTTFLQSDLSRDGKYLF 242 >1Z82-A nrPDB Length = 335 Score = 30.6 bits (67), Expect = 0.86, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 60/188 (31%), Gaps = 19/188 (10%) Query: 86 GDHTEVLKGIQKFPGINYPVLTPNLKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEE 145 E++ I Y + + KE ++ A + ++++ + Sbjct: 44 ARRKEIVDLINVSHTSPYVEESKITVRATNDLEEIKKEDILVIAIPVQYIREHLLRLPVK 103 Query: 146 SFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLGDT 205 + V V LGCPY P+ EV KK + ++L Sbjct: 104 PSMVLNLSKGIEIKTGKRVSEIVEEILGCPYAVLSGPSHAEEVAKKLPTA----VTL--- 156 Query: 206 IGVGTPGIMKDMLSAVMQEVPLAALAVH-CHDTYGQALANTLMALQMGVSVVDSSVAGLG 264 + + + + V+ C D G +A AL+ +++ + G G Sbjct: 157 --------AGENSKELQKRISTEYFRVYTCEDVVGVEIAG---ALKNVIAIAAGILDGFG 205 Query: 265 GCPYAQGA 272 G A+ A Sbjct: 206 GWDNAKAA 213 >5JBH-F nrPDB Length = 236 Score = 30.2 bits (66), Expect = 1.3, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 51/143 (35%), Gaps = 6/143 (4%) Query: 23 TSSMGTLPKRVKI---VEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSP 79 T M +RV+ VG RDG V I + ++ A L++IE Sbjct: 71 TVRMTDSGRRVRFRVLAAVGNRDGYVGLGIGHGKEVGIAIRKAINYAKLNIIEIKRGCGS 130 Query: 80 KWVPQMGDHTEVLKGIQKFPGINYPVLTPNLKGFEAAVAAGAKEVVIFGAASELFTK--K 137 W + V ++ G L P +G + K+++ +++++ Sbjct: 131 -WECRCRRPHSVPFAVEGKEGSVRVRLIPGPRGLGLVIGDVGKKILRLAGVQDVWSQTFG 189 Query: 138 NINCSIEESFQRFDAILKAAQSA 160 ++ + F+A+ + A Sbjct: 190 ETRTTVNFAKAVFNALYNTNRVA 212 >1F05-A nrPDB Length = 337 Score = 30.2 bits (66), Expect = 1.3, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 45/136 (33%), Gaps = 11/136 (8%) Query: 121 AKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKI 180 +E + +G + I +I++ F F A I R ++ Sbjct: 62 VEEAIAYGRKLGGSQEDQIKNAIDKLFVLFG----AEILKKIPGRVSTEVDARLSFDKDA 117 Query: 181 SPAKVAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQ 240 A+ + + + G D I + + + A + +HC+ T Sbjct: 118 MVARARRLIELYKEAGIS----KDRI-LIKLSSTWEGIQAGKEL--EEQHGIHCNMTLLF 170 Query: 241 ALANTLMALQMGVSVV 256 + A + + GV+++ Sbjct: 171 SFAQAVACAEAGVTLI 186 >3NWR-A nrPDB Length = 432 Score = 30.2 bits (66), Expect = 1.4, Method: Composition-based stats. Identities = 29/189 (15%), Positives = 57/189 (30%), Gaps = 11/189 (5%) Query: 43 GLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKFPGIN 102 G Q+ V + + S A + IE + +P + G + I Sbjct: 36 GEQSSGTFVRVANESDALRARSRASVLRIEELEAAARPSLPNAWLERQGTPGPWRRARIT 95 Query: 103 YPVLTPNLKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFD----AILKAAQ 158 N+ +AA ++ + RF+ + Sbjct: 96 LSFPLANIDANLPTLAATVAG-NLYDLGEVTGVRLLSLRLPASYRARFELPRHGVAGTRA 154 Query: 159 SANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLGDTIGVGTP--GIMKD 216 ++ R + + P G +S A+ A + ++ G + D P + + Sbjct: 155 LTDVKDRPMIGTII-KPNVG-LSAAETAALVRELCEAGVD--FIKDDEVCANPAHAPLAE 210 Query: 217 MLSAVMQEV 225 + AVM EV Sbjct: 211 RVRAVMSEV 219 >4NU7-A nrPDB Length = 246 Score = 29.8 bits (65), Expect = 1.5, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 22/62 (35%), Gaps = 2/62 (3%) Query: 174 CPYEGKISPAKVAEVTKKFYSMGCYEISLGDTIGVGTPGIMK--DMLSAVMQEVPLAALA 231 CP + +A K+ GC + L G P I ++ A+ + A Sbjct: 10 CPSVLASDLSSLASDAKRMVDAGCDWLHLDIMDGHFVPNISFGPGVVKALRGHLKSAFFD 69 Query: 232 VH 233 VH Sbjct: 70 VH 71 >3WQO-A nrPDB Length = 293 Score = 29.8 bits (65), Expect = 1.5, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 64/186 (34%), Gaps = 24/186 (12%) Query: 70 VIETTSFVSPKWVP---QMGDHTEV----------LKGIQKFPGINYPVLTPNLKGFEAA 116 V E T ++SPK + ++ D EV L + + E A Sbjct: 49 VCEGTHYLSPKNIKYLMELRDRYEVEIVVHAPFSDLNPASMNERVRKLTVECIRDAIEGA 108 Query: 117 VAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPY 176 ++ VV+ ++ ++ +F I++ A+ I + Sbjct: 109 FELDSEVVVVHPGYIPELWSNYVSEILDNNFSTLSEIVEIAEDYGIKIGLENMPNFR--G 166 Query: 177 EGKISPAKVAEVTKKFYS--MGCY-EISLGDTIGVGTPGIMKDMLSAVMQEVPLAALAVH 233 I+P + E+ K S +G +I +T G P + L Q + + + VH Sbjct: 167 VLGITPESLLEIVKDIDSKNLGITFDIGHANTAG--NPAEFVEKL----QNIGIGIIHVH 220 Query: 234 CHDTYG 239 HD G Sbjct: 221 AHDNNG 226 >5EMU-A nrPDB Length = 265 Score = 29.8 bits (65), Expect = 1.6, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 7/90 (7%) Query: 233 HCHDTYGQALANTLMALQMGVSVVDSSVAGLGGCPYAQGASGNLATE-DLVYMLEGLGIH 291 H +D ALA T A+ G VD PY +GN DLV + Sbjct: 78 HGNDDIDIALAETRAAIAWGADEVDVVF------PYRALMAGNEQVGFDLVKACKEACAA 131 Query: 292 TGVNLQKLLEAGNFICQALNRKTSSKVAQA 321 V L+ ++E G +AL RK S +A Sbjct: 132 ANVLLKVIIETGELKDEALIRKASEISIKA 161 >4AY7-A nrPDB Length = 348 Score = 29.4 bits (64), Expect = 2.4, Method: Composition-based stats. Identities = 9/71 (12%), Positives = 25/71 (35%), Gaps = 7/71 (9%) Query: 162 ISVRGYVSCALGC----PYEGKISPAKVAEVTKKFYSMGCYEISLGDTIG---VGTPGIM 214 +SV+ ++ ++ I+ G I++ D + + +P Sbjct: 165 VSVKSFMKWSIKKTDLLEQALDIATEASIIYANAMVEAGADVIAIADPVASPDLMSPDSF 224 Query: 215 KDMLSAVMQEV 225 + L + +Q+ Sbjct: 225 RQFLKSRLQKF 235 Score = 27.5 bits (59), Expect = 7.8, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 17/44 (38%) Query: 51 VSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKG 94 ++T I + + EAG VI V+ + + LK Sbjct: 187 IATEASIIYANAMVEAGADVIAIADPVASPDLMSPDSFRQFLKS 230 >2D6F-C nrPDB Length = 619 Score = 29.4 bits (64), Expect = 2.4, Method: Composition-based stats. Identities = 10/66 (15%), Positives = 23/66 (34%) Query: 59 LIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKFPGINYPVLTPNLKGFEAAVA 118 ++ L G+ ++E T+ S Q+ + + I + + + T + Sbjct: 171 VVFRLDRLGIPLVEITTDPSMSDPQQLREVAYQIGQILRSTRVKRGLGTIRQDLNISIRD 230 Query: 119 AGAKEV 124 EV Sbjct: 231 GARVEV 236 >2E1D-A nrPDB Length = 331 Score = 29.0 bits (63), Expect = 2.9, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 45/138 (32%), Gaps = 15/138 (10%) Query: 121 AKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKI 180 +E + +G ++ I +I++ F F A I R ++ Sbjct: 59 VEEAIAYGKKLGGPQEEQIKNAIDKLFVLFG----AEILKKIPGRVSTEVDARLSFDKDA 114 Query: 181 SPAKVAEVTKKFYSMGC--YEISLGDTIGVGTPGIMKDMLSAVMQEVPLAALAVHCHDTY 238 A+ + + + G I + + + A + +HC+ T Sbjct: 115 MVARARRLIELYKEAGVGKDRILIK-------LSSTWEGIQAGKEL--EEQHGIHCNMTL 165 Query: 239 GQALANTLMALQMGVSVV 256 + A + + GV+++ Sbjct: 166 LFSFAQAVACAEAGVTLI 183 >4YNZ-A nrPDB Length = 342 Score = 28.6 bits (62), Expect = 3.5, Method: Composition-based stats. Identities = 12/85 (14%), Positives = 23/85 (27%), Gaps = 2/85 (2%) Query: 207 GVGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVVDSSVAGLGGC 266 G TP + ++ + CH N L+ + + + D +A L Sbjct: 104 GRLTPKEARKFFRQIISALDFCHSHSICHRD--LKPENLLLDERNNIRIADFGMASLQVG 161 Query: 267 PYAQGASGNLATEDLVYMLEGLGIH 291 S ++ G Sbjct: 162 DSLLETSCGSPHYACPEVIRGEKYD 186 >4GMM-A nrPDB Length = 612 Score = 28.6 bits (62), Expect = 3.7, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 4/78 (5%) Query: 154 LKAAQSANISVRGYV--SCALGCPYEGKISPAKVAEVTKKFYSMGCYEI--SLGDTIGVG 209 ++ SA ++ GYV AL G ++ ++ ++K+F+ EI L D + Sbjct: 534 IEGEDSAKLTPIGYVPKEDALNLKGLGDVNVEELFGISKEFWEKEVEEIDKYLEDQVNAD 593 Query: 210 TPGIMKDMLSAVMQEVPL 227 P ++ L A+ Q + Sbjct: 594 LPYEIERELRALKQRISQ 611 >4E0B-A nrPDB Length = 313 Score = 27.9 bits (60), Expect = 6.6, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 38/116 (32%), Gaps = 16/116 (13%) Query: 10 RRLVGLASLRAVSTSSM-----GTLPKRVKIVEVGPRDG-------LQNEKNIVSTPVKI 57 R+L G+ +L + + + G P V++ +G G Q E S Sbjct: 144 RKLFGVTTLDVIRSETFVAELKGQDPGEVRVPVIGGHSGVTILPLLSQVEGVEFSDEEIA 203 Query: 58 KLIDMLSEAGLSVIET----TSFVSPKWVPQMGDHTEVLKGIQKFPGINYPVLTPN 109 L + AG V+E S ++K +Q I Y + N Sbjct: 204 ALTKRIQNAGTEVVEAKAGGGSATLSMGQAACRFGLALVKALQGEEVIEYAYVEGN 259 >2G76-A nrPDB Length = 335 Score = 27.9 bits (60), Expect = 6.8, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 68/220 (30%), Gaps = 18/220 (8%) Query: 61 DMLSEAGLSVIETTSFVSPKWVPQMGD------------HTEVLKGIQKFPGINYPVLTP 108 +L + GL V+E + + + ++ D +V+ +K + Sbjct: 41 KILQDGGLQVVEKQNLSKEELIAELQDCEGLIVRSATKVTADVINAAEKLQVVGRAGTGV 100 Query: 109 NLKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYV 168 + EAA G + S + + + Q A + + ++ Sbjct: 101 DNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASM-KDGKWERKKFM 159 Query: 169 SCALGCPYEGKISPAKVA-EVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPL 227 L G + ++ EV + S G I I + + PL Sbjct: 160 GTELNGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISPEVSASFGVQQLPLEEIWPL 219 Query: 228 AA-LAVHCH---DTYGQALANTLMALQMGVSVVDSSVAGL 263 + VH T G NT + GV VV+ + G+ Sbjct: 220 CDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGI 259 >1IE3-A nrPDB Length = 312 Score = 27.5 bits (59), Expect = 8.9, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 25/86 (29%), Gaps = 11/86 (12%) Query: 27 GTLPKRVKIVEVGPRDG-------LQNEKNIVSTPVKIKLIDMLSEAGLSVIET----TS 75 G P V++ +G G Q + L + AG V+E S Sbjct: 163 GKQPGEVEVPVIGGHSGVTILPLLSQVPGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGS 222 Query: 76 FVSPKWVPQMGDHTEVLKGIQKFPGI 101 +++ +Q G+ Sbjct: 223 ATLSMGQAAARFGLSLVRALQGEQGV 248 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.310 0.121 0.277 Lambda K H 0.267 0.0368 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,709,818 Number of Sequences: 36641 Number of extensions: 294070 Number of successful extensions: 1157 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 42 Number of HSP's successfully gapped in prelim test: 30 Number of HSP's that attempted gapping in prelim test: 1054 Number of HSP's gapped (non-prelim): 76 length of query: 325 length of database: 10,336,785 effective HSP length: 97 effective length of query: 228 effective length of database: 6,782,608 effective search space: 1546434624 effective search space used: 1546434624 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 59 (27.5 bits)