BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= P35844
         (434 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

1ZI7-A nrPDB                                                          813   0.0  
4B2Z-A nrPDB                                                          122   3e-28
5ZM8-A nrPDB                                                           62   4e-10
3R75-A nrPDB                                                           31   1.2  
5VU2-M nrPDB                                                           29   3.2  
3N42-F nrPDB                                                           29   3.9  
2XFB-A nrPDB                                                           29   3.9  
2XFC-A nrPDB                                                           29   4.6  
4ARC-A nrPDB                                                           29   5.0  

>1ZI7-A nrPDB
          Length = 406

 Score =  813 bits (2101), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/405 (98%), Positives = 400/405 (98%), Gaps = 3/405 (0%)

Query: 30  PPFILSPISLTEFSQYWAEHPELFLEPSFINDDNYKEHCLIDPEVESPELARMLAVTKWF 89
           PPFILSPISLTEFSQYWAEHPELFLEPSFINDDNYKEHCLIDPEVESPELARMLAVTKWF
Sbjct: 5   PPFILSPISLTEFSQYWAEHPELFLEPSFINDDNYKEHCLIDPEVESPELARMLAVTKWF 64

Query: 90  ISTLKSQYCSRNESLGSEKKPLNPFLGELFVGKWENKEHPEFGETVLLSEQVSHHPPVTA 149
           ISTLKSQYCSRNESLGSEKKPLNPFLGELFVGKWENKEHPEFGETVLLSEQVSHHPPVTA
Sbjct: 65  ISTLKSQYCSRNESLGSEKKPLNPFLGELFVGKWENKEHPEFGETVLLSEQVSHHPPVTA 124

Query: 150 FSIFNDKNKVKLQGYNQIKASFTKSLMLTVKQFGHTMLDIKDESYLVTPPPLHIEGILVA 209
           FSIFNDKNKVKLQGYNQIKASFTKSLMLTVKQFGHTMLDIKDESYLVTPPPLHIEGILVA
Sbjct: 125 FSIFNDKNKVKLQGYNQIKASFTKSLMLTVKQFGHTMLDIKDESYLVTPPPLHIEGILVA 184

Query: 210 SPFVELEGKSYIQSSTGLLCVIEFSGRGYFSGKKNSFKARIYKDSKDSKDKEKALYTISG 269
           SPFVELEGKSYIQSSTGLLCVIEFSG     GKKNSFKARIYKDSKDSKDKEKALYTISG
Sbjct: 185 SPFVELEGKSYIQSSTGLLCVIEFSG---VDGKKNSFKARIYKDSKDSKDKEKALYTISG 241

Query: 270 QWSGSSKIIKANKKEESRLFYDAARIPAEHLNVKPLEEQHPLESRKAWYDVAGAIKLGDF 329
           QWSGSSKIIKANKKEESRLFYDAARIPAEHLNVKPLEEQHPLESRKAWYDVAGAIKLGDF
Sbjct: 242 QWSGSSKIIKANKKEESRLFYDAARIPAEHLNVKPLEEQHPLESRKAWYDVAGAIKLGDF 301

Query: 330 NLIAKTKTELEETQRELRKEEEAKGISWQRRWFKDFDYSVTPEEGALVPEKDDTFLKLAS 389
           NLIAKTKTELEETQRELRKEEEAKGISWQRRWFKDFDYSVTPEEGALVPEKDDTFLKLAS
Sbjct: 302 NLIAKTKTELEETQRELRKEEEAKGISWQRRWFKDFDYSVTPEEGALVPEKDDTFLKLAS 361

Query: 390 ALNLSTKNAPSGTLVGDKEDRKEDLSSIHWRFQRELWDEEKEIVL 434
           ALNLSTKNAPSGTLVGDKEDRKEDLSSIHWRFQRELWDEEKEIVL
Sbjct: 362 ALNLSTKNAPSGTLVGDKEDRKEDLSSIHWRFQRELWDEEKEIVL 406


>4B2Z-A nrPDB
          Length = 448

 Score =  122 bits (306), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 166/365 (45%), Gaps = 55/365 (15%)

Query: 23  DLSSLSAPPFILSPISLTEFSQYWAEHPELFLEPSFINDDNYKEHCLIDPEVESPELARM 82
           DL+ ++ P FIL   S+ E      + PE  L+           H   DP      L R 
Sbjct: 63  DLTRITLPTFILEKKSMLERVTNQLQFPEFLLQ----------AHSEKDP------LKRF 106

Query: 83  LAVTKWFISTLKSQYCSRNESLGSEKKPLNPFLGELFVGKWENKEHPEFGETVLLSEQVS 142
           L V KW+++         + +  + KKPLNP LGE F   W+    P   +   +SEQ S
Sbjct: 107 LYVMKWYLAGW-------HIAPKAVKKPLNPVLGEYFTAYWD---LPNKQQAYYISEQTS 156

Query: 143 HHPPVTAFSIFNDKNKVKLQGYNQIKASF---TKSLML---TVKQFGHTMLDIKD----- 191
           HHPP  A+     ++ +++ G    K+ F   + + M+   TV QF    LDIKD     
Sbjct: 157 HHPPECAYFYMIPESSIRVDGVVIPKSRFLGNSSAAMMDGSTVLQF----LDIKDGNGKP 212

Query: 192 ESYLVTPPPLHIEGILVASPFVELEGKSYIQSSTGLLCVIEFSGRGYFSGKKNSFKARIY 251
           E Y++T P +++ GIL     +EL G   I  S      IEF  +GY  G  ++ +  + 
Sbjct: 213 EKYVLTQPNVYVRGILFGKMRIEL-GDHMIIKSPNFQADIEFKTKGYVFGTYDAIEGTV- 270

Query: 252 KDSKDSKDKEKALYTISGQWSGSSKIIKANKKEES-RLFYDAARIPAEHLNVKPLEEQHP 310
           KD   +     A Y ISG+W+    +    +   S ++F D  +       V+PL EQ  
Sbjct: 271 KDYDGN-----AYYEISGKWNDVMYLKDLKQPRSSPKVFLDTHKESPLRPKVRPLSEQGE 325

Query: 311 LESRKAWYDVAGAIKLGDFNLIAKTKTELEETQRELRKEEEAKGISWQRRWFK------D 364
            ESRK W  V  A+ + +  +  + K ++E+ QR+L K+    G+ +  + F+      D
Sbjct: 326 YESRKLWKKVTDALAVRNHPVATEEKFQIEDHQRQLAKKRIEDGVEFHPKLFRRSKPGED 385

Query: 365 FDYSV 369
            DY +
Sbjct: 386 LDYCI 390


>5ZM8-A nrPDB
          Length = 455

 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 128/325 (39%), Gaps = 74/325 (22%)

Query: 109 KPLNPFLGELFVGKWENKEHPEFGETVLLSEQVSHHPPVTAFSIFNDKNKVKLQGYNQIK 168
           KP NP LGE +    E+      G    +SEQVSHHPP++AF      +     G    K
Sbjct: 125 KPFNPLLGETYELIRED-----LG-FRFISEQVSHHPPISAFHSEGLNHDFLFHGSIYPK 178

Query: 169 ASF-TKSLMLTVKQFGHTMLDIKDESYLVTPPPLHIEGILVASPFVELEGKSYI-QSSTG 226
             F  KS+    +      L   +E+Y  T P   +  +++   ++E  G   I    TG
Sbjct: 179 LKFWGKSVEAEPRGTITLELLKHNEAYTWTNPTCCVHNVIIGKLWIEQYGTVEILNHRTG 238

Query: 227 LLCVIEFSGRGYFSGKKNSFKARIYKDSKDSKDKEKALYTISGQWS----GSSKI-IKAN 281
             CV+ F   G F  + +  +  I   +K      K L+ I G+W+    G   +  ++ 
Sbjct: 239 HKCVLHFKPCGLFGKELHKVEGHIQDKNK------KKLFMIYGKWTECLWGIDPVSYESF 292

Query: 282 KKEESR--------LFYDAAR------------------IPAEHL----NVKP------- 304
           KK+E R        L  D+ +                  IP   L    N +P       
Sbjct: 293 KKQERRGDHLRKAKLDEDSGKADSDVADDVPVAQETVQVIPGSKLLWRINTRPPNSAQMY 352

Query: 305 ---------------LEEQHPLESRKAWYDVAGAIKLGDFNLIAKTKTELEETQRELRKE 349
                          +E+  P    +   D+ G ++ G+ +L ++ K  LEE QRE R+E
Sbjct: 353 NFTSFTVSLNELETGMEKTLPPTDCRLRPDIRG-MENGNMDLASQEKERLEEKQREARRE 411

Query: 350 EEAKGISWQRRWF--KDFDYSVTPE 372
              +   WQ RWF   +  Y+ TP+
Sbjct: 412 RAKEEAEWQTRWFYPGNNPYTGTPD 436


>3R75-A nrPDB
          Length = 645

 Score = 30.8 bits (68), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 18/83 (21%)

Query: 182 FGHTMLDIKDESYLVTPPPLHIEGILVASPFVELEGKSYIQSSTGLLCVIEFSGRGYFSG 241
            GHT  D++D              +L  + F      S I+S+T ++   E +GRGY+SG
Sbjct: 287 VGHTEADVRD--------------LLRETMFAPTVTGSPIESATRVIARHERAGRGYYSG 332

Query: 242 KKNSFKARIYKDSKDSKDKEKAL 264
                 A I +D++  +  + A+
Sbjct: 333 ----IAALIGRDARGGRTLDSAI 351


>5VU2-M nrPDB
          Length = 866

 Score = 29.3 bits (64), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 7   SSSWTSFLKSIASFNGDLSSLSAPPF 32
           SS+WT F   I  + GD+ ++  PPF
Sbjct: 651 SSAWTPFDNKIVVYKGDVYNMDYPPF 676


>3N42-F nrPDB
          Length = 473

 Score = 29.3 bits (64), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 7   SSSWTSFLKSIASFNGDLSSLSAPPF 32
           SS+WT F   I  + GD+ ++  PPF
Sbjct: 189 SSAWTPFDNKIVVYKGDVYNMDYPPF 214


>2XFB-A nrPDB
          Length = 391

 Score = 29.3 bits (64), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 7   SSSWTSFLKSIASFNGDLSSLSAPPF 32
           SS+WT F   I  + GD+ ++  PPF
Sbjct: 167 SSAWTPFDNKIVVYKGDVYNMDYPPF 192


>2XFC-A nrPDB
          Length = 439

 Score = 28.9 bits (63), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 7   SSSWTSFLKSIASFNGDLSSLSAPPF 32
           SS+WT F   I  + GD+ ++  PPF
Sbjct: 167 SSAWTPFDNKIVVYKGDVYNMDYPPF 192


>4ARC-A nrPDB
          Length = 880

 Score = 28.9 bits (63), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 329 FNLIAKTKTELEETQRELRKEEEAKGISWQRRWFKDFDYSVTPEEGALVPEKDD 382
           FN IA   T +   +R++       G+S QR W       VT E+G ++P  DD
Sbjct: 416 FNAIADKLTAMGVGERKVNYRLRDWGVSRQRYWGAPIPM-VTLEDGTVMPTPDD 468


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

1ZI7-A nrPDB                                                          656   0.0  
4B2Z-A nrPDB                                                          403   e-112
5ZM8-A nrPDB                                                          319   2e-87

Sequences not found previously or not previously below threshold:

4AZ1-A nrPDB                                                           32   0.34 
5GMK-P nrPDB                                                           32   0.51 
5D98-A nrPDB                                                           31   0.76 
5VU2-M nrPDB                                                           31   1.3  
3N42-F nrPDB                                                           31   1.3  
2XFC-A nrPDB                                                           31   1.3  
2XFB-A nrPDB                                                           31   1.3  
5E4S-A nrPDB                                                           31   1.5  
3VHL-B nrPDB                                                           29   5.4  


CONVERGED!
>1ZI7-A nrPDB
          Length = 406

 Score =  656 bits (1693), Expect = 0.0,   Method: Composition-based stats.
 Identities = 400/405 (98%), Positives = 400/405 (98%), Gaps = 3/405 (0%)

Query: 30  PPFILSPISLTEFSQYWAEHPELFLEPSFINDDNYKEHCLIDPEVESPELARMLAVTKWF 89
           PPFILSPISLTEFSQYWAEHPELFLEPSFINDDNYKEHCLIDPEVESPELARMLAVTKWF
Sbjct: 5   PPFILSPISLTEFSQYWAEHPELFLEPSFINDDNYKEHCLIDPEVESPELARMLAVTKWF 64

Query: 90  ISTLKSQYCSRNESLGSEKKPLNPFLGELFVGKWENKEHPEFGETVLLSEQVSHHPPVTA 149
           ISTLKSQYCSRNESLGSEKKPLNPFLGELFVGKWENKEHPEFGETVLLSEQVSHHPPVTA
Sbjct: 65  ISTLKSQYCSRNESLGSEKKPLNPFLGELFVGKWENKEHPEFGETVLLSEQVSHHPPVTA 124

Query: 150 FSIFNDKNKVKLQGYNQIKASFTKSLMLTVKQFGHTMLDIKDESYLVTPPPLHIEGILVA 209
           FSIFNDKNKVKLQGYNQIKASFTKSLMLTVKQFGHTMLDIKDESYLVTPPPLHIEGILVA
Sbjct: 125 FSIFNDKNKVKLQGYNQIKASFTKSLMLTVKQFGHTMLDIKDESYLVTPPPLHIEGILVA 184

Query: 210 SPFVELEGKSYIQSSTGLLCVIEFSGRGYFSGKKNSFKARIYKDSKDSKDKEKALYTISG 269
           SPFVELEGKSYIQSSTGLLCVIEFSG     GKKNSFKARIYKDSKDSKDKEKALYTISG
Sbjct: 185 SPFVELEGKSYIQSSTGLLCVIEFSG---VDGKKNSFKARIYKDSKDSKDKEKALYTISG 241

Query: 270 QWSGSSKIIKANKKEESRLFYDAARIPAEHLNVKPLEEQHPLESRKAWYDVAGAIKLGDF 329
           QWSGSSKIIKANKKEESRLFYDAARIPAEHLNVKPLEEQHPLESRKAWYDVAGAIKLGDF
Sbjct: 242 QWSGSSKIIKANKKEESRLFYDAARIPAEHLNVKPLEEQHPLESRKAWYDVAGAIKLGDF 301

Query: 330 NLIAKTKTELEETQRELRKEEEAKGISWQRRWFKDFDYSVTPEEGALVPEKDDTFLKLAS 389
           NLIAKTKTELEETQRELRKEEEAKGISWQRRWFKDFDYSVTPEEGALVPEKDDTFLKLAS
Sbjct: 302 NLIAKTKTELEETQRELRKEEEAKGISWQRRWFKDFDYSVTPEEGALVPEKDDTFLKLAS 361

Query: 390 ALNLSTKNAPSGTLVGDKEDRKEDLSSIHWRFQRELWDEEKEIVL 434
           ALNLSTKNAPSGTLVGDKEDRKEDLSSIHWRFQRELWDEEKEIVL
Sbjct: 362 ALNLSTKNAPSGTLVGDKEDRKEDLSSIHWRFQRELWDEEKEIVL 406


>4B2Z-A nrPDB
          Length = 448

 Score =  403 bits (1034), Expect = e-112,   Method: Composition-based stats.
 Identities = 110/390 (28%), Positives = 176/390 (45%), Gaps = 59/390 (15%)

Query: 23  DLSSLSAPPFILSPISLTEFSQYWAEHPELFLEPSFINDDNYKEHCLIDPEVESPELARM 82
           DL+ ++ P FIL   S+ E      + PE  L+           H   DP      L R 
Sbjct: 63  DLTRITLPTFILEKKSMLERVTNQLQFPEFLLQ----------AHSEKDP------LKRF 106

Query: 83  LAVTKWFISTLKSQYCSRNESLGSEKKPLNPFLGELFVGKWENKEHPEFGETVLLSEQVS 142
           L V KW+++         + +  + KKPLNP LGE F   W+    P   +   +SEQ S
Sbjct: 107 LYVMKWYLAGW-------HIAPKAVKKPLNPVLGEYFTAYWD---LPNKQQAYYISEQTS 156

Query: 143 HHPPVTAFSIFNDKNKVKLQGYNQIKASF---TKSLML---TVKQFGHTMLDIKD----- 191
           HHPP  A+     ++ +++ G    K+ F   + + M+   TV QF    LDIKD     
Sbjct: 157 HHPPECAYFYMIPESSIRVDGVVIPKSRFLGNSSAAMMDGSTVLQF----LDIKDGNGKP 212

Query: 192 ESYLVTPPPLHIEGILVASPFVELEGKSYIQSSTGLLCVIEFSGRGYFSGKKNSFKARIY 251
           E Y++T P +++ GIL     +EL G   I  S      IEF  +GY  G  ++ +  + 
Sbjct: 213 EKYVLTQPNVYVRGILFGKMRIEL-GDHMIIKSPNFQADIEFKTKGYVFGTYDAIEGTV- 270

Query: 252 KDSKDSKDKEKALYTISGQWSGSSKIIKANKKEES-RLFYDAARIPAEHLNVKPLEEQHP 310
           KD   +     A Y ISG+W+    +    +   S ++F D  +       V+PL EQ  
Sbjct: 271 KDYDGN-----AYYEISGKWNDVMYLKDLKQPRSSPKVFLDTHKESPLRPKVRPLSEQGE 325

Query: 311 LESRKAWYDVAGAIKLGDFNLIAKTKTELEETQRELRKEEEAKGISWQRRWFK------D 364
            ESRK W  V  A+ + +  +  + K ++E+ QR+L K+    G+ +  + F+      D
Sbjct: 326 YESRKLWKKVTDALAVRNHPVATEEKFQIEDHQRQLAKKRIEDGVEFHPKLFRRSKPGED 385

Query: 365 FDYSVTPEEGALVPEKDDTFLKLASALNLS 394
            DY +       +P  +D   ++ S L ++
Sbjct: 386 LDYCIYKN----IPVDEDPEKQIRSILQIA 411


>5ZM8-A nrPDB
          Length = 455

 Score =  319 bits (816), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 102/426 (23%), Positives = 162/426 (38%), Gaps = 100/426 (23%)

Query: 8   SSWTSFLKSIASFNGDLSSLSAPPFILSPISLTEFSQYWAEHPELFLEPSFINDDNYKEH 67
           S WT   K +     +LS ++ P     P+S  +    + EH  L           ++  
Sbjct: 50  SVWTILKKCVGL---ELSKITMPIAFNEPLSFLQRITEYMEHVYLI----------HRAS 96

Query: 68  CLIDPEVESPELARMLAVTKWFISTLKSQYCSRNESLGSEKKPLNPFLGELFVGKWENKE 127
           C   P      L RM +V  + +S + SQ+           KP NP LGE +    E+  
Sbjct: 97  CQPQP------LERMQSVAAFAVSAVASQWERTG-------KPFNPLLGETYELIREDLG 143

Query: 128 HPEFGETVLLSEQVSHHPPVTAFSIFNDKNKVKLQGYNQIKASF-TKSLMLTVKQFGHTM 186
                    +SEQVSHHPP++AF      +     G    K  F  KS+    +      
Sbjct: 144 ------FRFISEQVSHHPPISAFHSEGLNHDFLFHGSIYPKLKFWGKSVEAEPRGTITLE 197

Query: 187 LDIKDESYLVTPPPLHIEGILVASPFVELEGKSYI-QSSTGLLCVIEFSGRGYFSGKKNS 245
           L   +E+Y  T P   +  +++   ++E  G   I    TG  CV+ F   G F  + + 
Sbjct: 198 LLKHNEAYTWTNPTCCVHNVIIGKLWIEQYGTVEILNHRTGHKCVLHFKPCGLFGKELHK 257

Query: 246 FKARIYKDSKDSKDKEKALYTISGQWS----GSSKI-IKANKKEESR--------LFYDA 292
            +  I   +K      K L+ I G+W+    G   +  ++ KK+E R        L  D+
Sbjct: 258 VEGHIQDKNK------KKLFMIYGKWTECLWGIDPVSYESFKKQERRGDHLRKAKLDEDS 311

Query: 293 AR------------------IPAEHL----NVKP----------------------LEEQ 308
            +                  IP   L    N +P                      +E+ 
Sbjct: 312 GKADSDVADDVPVAQETVQVIPGSKLLWRINTRPPNSAQMYNFTSFTVSLNELETGMEKT 371

Query: 309 HPLESRKAWYDVAGAIKLGDFNLIAKTKTELEETQRELRKEEEAKGISWQRRWF--KDFD 366
            P    +   D+ G ++ G+ +L ++ K  LEE QRE R+E   +   WQ RWF   +  
Sbjct: 372 LPPTDCRLRPDIRG-MENGNMDLASQEKERLEEKQREARRERAKEEAEWQTRWFYPGNNP 430

Query: 367 YSVTPE 372
           Y+ TP+
Sbjct: 431 YTGTPD 436


>4AZ1-A nrPDB
          Length = 302

 Score = 32.5 bits (72), Expect = 0.34,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 42/106 (39%), Gaps = 13/106 (12%)

Query: 302 VKPLEEQHPLESRKAWYDVAGAIKL---GDFNLIAKTK----TELEETQRELRKEEEAKG 354
           V  LEE   +++ + W +  G+  +   G+  L          E+E+  +  R+    + 
Sbjct: 119 VTKLEEGGFVKADRYWPEERGSGSIAVSGNCGLTISEDPGKAYEVEDELKITRRYLILQR 178

Query: 355 ISWQRRWFKDFDYSVTPEEGALVPEKDDTFLKLASALNLSTKNAPS 400
                  F    Y+  P+ G  +P+   +      AL  + KN+P+
Sbjct: 179 ADEPPHKFTQVQYTGWPDHG--IPQSATSL----EALLTNVKNSPT 218


>5GMK-P nrPDB
          Length = 379

 Score = 32.1 bits (71), Expect = 0.51,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 15/79 (18%)

Query: 305 LEEQHPLESRKAWYDVAGAIKLGDFNLIAKTKTELEETQRELRKEEEAKGISWQRRWFKD 364
           L E      +KA  ++   ++L            L   Q  L KE + K +S + R+   
Sbjct: 204 LSEALENADKKARQEIRSKMELK----------RLAMEQEMLAKESKLKELSQRARY--- 250

Query: 365 FDYSVTPEEGALVPEKDDT 383
             ++ TP+ GA+V  K  T
Sbjct: 251 --HNGTPQTGAIVKPKKQT 267


>5D98-A nrPDB
          Length = 709

 Score = 31.3 bits (69), Expect = 0.76,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%)

Query: 289 FYDAARIPAEHLNVKPLEEQHPLESRKAWYDVAGAIKLGDF 329
           F+    + A     KPL+ ++P+  +  W  +  AI     
Sbjct: 289 FFKKGNLSAIRPKDKPLQGKYPIHYKNLWNQIKAAIADRTM 329


>5VU2-M nrPDB
          Length = 866

 Score = 30.5 bits (67), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 7   SSSWTSFLKSIASFNGDLSSLSAPPF 32
           SS+WT F   I  + GD+ ++  PPF
Sbjct: 651 SSAWTPFDNKIVVYKGDVYNMDYPPF 676


>3N42-F nrPDB
          Length = 473

 Score = 30.5 bits (67), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 7   SSSWTSFLKSIASFNGDLSSLSAPPF 32
           SS+WT F   I  + GD+ ++  PPF
Sbjct: 189 SSAWTPFDNKIVVYKGDVYNMDYPPF 214


>2XFC-A nrPDB
          Length = 439

 Score = 30.5 bits (67), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 7   SSSWTSFLKSIASFNGDLSSLSAPPF 32
           SS+WT F   I  + GD+ ++  PPF
Sbjct: 167 SSAWTPFDNKIVVYKGDVYNMDYPPF 192


>2XFB-A nrPDB
          Length = 391

 Score = 30.5 bits (67), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 7   SSSWTSFLKSIASFNGDLSSLSAPPF 32
           SS+WT F   I  + GD+ ++  PPF
Sbjct: 167 SSAWTPFDNKIVVYKGDVYNMDYPPF 192


>5E4S-A nrPDB
          Length = 303

 Score = 30.5 bits (67), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 4/78 (5%)

Query: 86  TKWFISTLKSQYCSRNESLGSEKKPLNPFLGELFVGKWENKEHPEFGET--VLLSEQVSH 143
             W ++ L S   SR        +P +PF  E+ VG + NK    F  T  V  +E+   
Sbjct: 150 MIWMLTVLASADASRYVFRNESVRPFSPF--EVKVGVFNNKGEGPFSPTTLVYSAEEEPT 207

Query: 144 HPPVTAFSIFNDKNKVKL 161
            PP + F+       +++
Sbjct: 208 KPPASIFARSLSATDIEV 225


>3VHL-B nrPDB
          Length = 195

 Score = 28.6 bits (62), Expect = 5.4,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 23/56 (41%)

Query: 140 QVSHHPPVTAFSIFNDKNKVKLQGYNQIKASFTKSLMLTVKQFGHTMLDIKDESYL 195
           +++HH P T F +   +  ++       K +  K   +T +       D+K   Y+
Sbjct: 107 EITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYV 162


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.307    0.123    0.333 

Lambda     K      H
   0.267   0.0373    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,014,654
Number of Sequences: 36641
Number of extensions: 616068
Number of successful extensions: 1232
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1187
Number of HSP's gapped (non-prelim): 33
length of query: 434
length of database: 10,336,785
effective HSP length: 100
effective length of query: 334
effective length of database: 6,672,685
effective search space: 2228676790
effective search space used: 2228676790
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 60 (27.9 bits)