BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P35486 (390 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3EXI-A nrPDB 751 0.0 3DVA-A nrPDB 132 2e-31 1UM9-A nrPDB 132 4e-31 1X7Z-A nrPDB 118 5e-27 1QS0-A nrPDB 94 8e-20 2JGD-B nrPDB 47 1e-05 4Q9D-A nrPDB 47 1e-05 6A50-A nrPDB 40 0.002 2O1S-A nrPDB 39 0.005 3ZHS-A nrPDB 36 0.033 4KXX-A nrPDB 33 0.16 4K9Q-A nrPDB 33 0.21 2RML-A nrPDB 30 1.2 1V0B-A nrPDB 30 2.0 3CF4-A nrPDB 29 4.2 4H9D-A nrPDB 28 4.7 4V4O-A nrPDB 28 8.7 >3EXI-A nrPDB Length = 382 Score = 751 bits (1938), Expect = 0.0, Method: Compositional matrix adjust. Identities = 357/365 (97%), Positives = 360/365 (98%) Query: 26 ASRNFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQK 85 S FANDATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQK Sbjct: 18 GSHMFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQK 77 Query: 86 IIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLPVRAILAELTGRRGGC 145 IIRGFCHLCDGQEACCVGLEAGINPTDHLITA+RAHGFTFTRGL VR ILAELTGR+GGC Sbjct: 78 IIRGFCHLCDGQEACCVGLEAGINPTDHLITAFRAHGFTFTRGLSVREILAELTGRKGGC 137 Query: 146 AKGKGGSMHMYAKNFYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIF 205 AKGKGGSMHMYAKNFYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIF Sbjct: 138 AKGKGGSMHMYAKNFYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIF 197 Query: 206 EAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCVREA 265 EAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCVREA Sbjct: 198 EAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCVREA 257 Query: 266 TKFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMV 325 T+FAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMV Sbjct: 258 TRFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMV 317 Query: 326 NSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIYSSDPPFEVRGANQWIK 385 NSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIYSSDPPFEVRGANQWIK Sbjct: 318 NSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIYSSDPPFEVRGANQWIK 377 Query: 386 FKSVS 390 FKSVS Sbjct: 378 FKSVS 382 >3DVA-A nrPDB Length = 369 Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 97/326 (29%), Positives = 153/326 (46%), Gaps = 13/326 (3%) Query: 56 LTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLI 115 L+ E + R M R ++ ++ L +Q + GF GQEA + + D ++ Sbjct: 42 LSDEQLKELMRRMVYTRILDQRSISLNRQGRL-GFYAPTAGQEASQIASHFALEKEDFIL 100 Query: 116 TAYRAHGFTFTRGLPVRAILAELTGRRGGCAKGKGGSMHMYAKNFYGGNGIVGAQVPLGA 175 YR GLP+ G G +G N I+GAQ A Sbjct: 101 PGYRDVPQIIWHGLPLYQAFLFSRGHFHGNQIPEG-------VNVLPPQIIIGAQYIQAA 153 Query: 176 GIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVER 235 G+AL K GK V +T GDG +QG +E N A +K P IF+ +NNR+ T VE+ Sbjct: 154 GVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFAASTPVEK 213 Query: 236 AAASTDYYKRGDF--IPGLRVDGMDILCVREATKFAAAYCRSGKGPILMELQTYRYHGHS 293 + ++ IPG++VDGMD L V A K A +G+GP L+E +RY H+ Sbjct: 214 QTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLCFRYGPHT 273 Query: 294 MS-DPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQF 352 MS D YR++ E++ +K DP++ + + L S EE + + ++EI++A + Sbjct: 274 MSGDDPTRYRSK-ELENEWAKKDPLVRFRKFLEAKGLWSEEEENNVIEQAKEEIKEAIKK 332 Query: 353 ATADPEPPLEELGYHIYSSDPPFEVR 378 A P+ + +L I + PF ++ Sbjct: 333 ADETPKQKVTDL-ISIMFEELPFNLK 357 >1UM9-A nrPDB Length = 367 Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 98/320 (30%), Positives = 147/320 (45%), Gaps = 15/320 (4%) Query: 63 KYYRMMQTVRRMELKADQLYKQKIIRG---FCHLCDGQEACCVGLEAGINP-TDHLITAY 118 + YR M R + D+ Y I G F G EA V + I P D + Y Sbjct: 40 RLYRDMLAARML----DERYTILIRTGKTSFIAPAAGHEAAQVAIAHAIRPGFDWVFPYY 95 Query: 119 RAHGFTFTRGLPVRAILAELTGRRGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVPLGAG 176 R HG G+P++ +L ++ + KG+ H +K NF+ + + VP AG Sbjct: 96 RDHGLALALGIPLKELLGQMLATKADPNKGRQMPEHPGSKALNFFTVASPIASHVPPAAG 155 Query: 177 IALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERA 236 A++ K +V + +GDGA ++G + N AA+ P +FI ENN Y + Sbjct: 156 AAISMKLLRTGQVAVCTFGDGATSEGDWYAGINFAAVQGAPAVFIAENNFYAISVDYRHQ 215 Query: 237 AASTDYYKRGDF--IPGLRVDGMDILCVREATKFAAAYCRSGKGPILMELQTYRYHGHSM 294 S + IPG VDGMD+L K A R G+GP L+EL+ YRY HS Sbjct: 216 THSPTIADKAHAFGIPGYLVDGMDVLASYYVVKEAVERARRGEGPSLVELRVYRYGPHSS 275 Query: 295 SDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFA- 353 +D YR +EE+ R K DPI + + L + E +++ E+R E+E + A Sbjct: 276 ADDDSRYRPKEEVAFWRKK-DPIPRFRRFLEARGLWNEEWEEDVREEIRAELERGLKEAE 334 Query: 354 TADPEPPLEELGYHIYSSDP 373 A P PP E + +++ P Sbjct: 335 EAGPVPP-EWMFEDVFAEKP 353 >1X7Z-A nrPDB Length = 400 Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 95/329 (28%), Positives = 145/329 (44%), Gaps = 19/329 (5%) Query: 56 LTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLI 115 L +E LK Y+ M + M+ + +Q I F G+E VG A ++ TD + Sbjct: 52 LPKEKVLKLYKSMTLLNTMDRILYESQRQGRI-SFYMTNYGEEGTHVGSAAALDNTDLVF 110 Query: 116 TAYRAHGFTFTRGLPVRAILAELTGRRGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVPL 173 YR G R P+ +A+ G KG+ +H K +F + + Q+P Sbjct: 111 GQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLATQIPQ 170 Query: 174 GAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSV 233 G A A K + V + +G+GAA++G +N AA + P IF C NN Y + T Sbjct: 171 AVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPT 230 Query: 234 ERAAASTDYYKRGDFI----PG-----LRVDGMDILCVREATKFAAAYCRSGKGPILMEL 284 S Y RGD I PG +RVDG D+ V ATK A + P L+E Sbjct: 231 -----SEQY--RGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEA 283 Query: 285 QTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRK 344 TYR H SD +YR+ +E+ + PI L+ +++ E+ K + R+ Sbjct: 284 MTYRIGHHDTSDDSSAYRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRR 343 Query: 345 EIEDAAQFATADPEPPLEELGYHIYSSDP 373 ++ +A + A P+P L +Y P Sbjct: 344 KVMEAFEQAERKPKPNPNLLFSDVYQEMP 372 >1QS0-A nrPDB Length = 407 Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 76/269 (28%), Positives = 114/269 (42%), Gaps = 12/269 (4%) Query: 96 GQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLPVRAILAELTGRRGGCAKGKGGSMHM 155 G+EA G +N TD YR R + + ++ +L KG+ + M Sbjct: 110 GEEAIGSGQALALNRTDMCFPTYRQQSILMARDVSLVEMICQLLSNERDPLKGRQLPI-M 168 Query: 156 YA---KNFYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAA 212 Y+ F+ +G + Q G A+A G ++ GDGA + A A Sbjct: 169 YSVREAGFFTISGNLATQFVQAVGWAMASAIKGDTKIASAWIGDGATAESDFHTALTFAH 228 Query: 213 LWKLPCIFICENNRYGMGTSVERAAA-STDYYKRGDF--IPGLRVDGMDILCVREATKFA 269 +++ P I NN++ + T A ST + RG I LRVDG D + V A+++A Sbjct: 229 VYRAPVILNVVNNQWAISTFQAIAGGESTTFAGRGVGCGIASLRVDGNDFVAVYAASRWA 288 Query: 270 AAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNL 329 A R G GP L+E TYR HS SD YR ++ DPI LK ++ Sbjct: 289 AERARRGLGPSLIEWVTYRAGPHSTSDDPSKYRPADDWSHF-PLGDPIARLKQHLIKIGH 347 Query: 330 ASVEELKEIDVEVRKEI----EDAAQFAT 354 S EE + E + ++A Q+ T Sbjct: 348 WSEEEHQATTAEFEAAVIAAQKEAEQYGT 376 >2JGD-B nrPDB Length = 933 Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 13/190 (6%) Query: 191 LTLYGDGAAN-QGQIFEAYNMAALWKLPC---IFICENNRYGMGTSVERAAASTDY-YKR 245 +T++GD A QG + E NM+ + I NN+ G TS A ST Y Sbjct: 352 ITIHGDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCTDI 411 Query: 246 GDFI--PGLRVDGMDILCVREATKFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRT 303 G + P V+ D V T+ A + + K + ++L YR HGH+ +D + + Sbjct: 412 GKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEPSATQP 471 Query: 304 REEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEE 363 Q+++ P + D++ +A++E+ E+ V + ++ DA A+ P Sbjct: 472 L-MYQKIKKHPTPRKIYADKLEQEKVATLEDATEM-VNLYRDALDAGDCVVAEWRP---- 525 Query: 364 LGYHIYSSDP 373 + H ++ P Sbjct: 526 MNMHSFTWSP 535 >4Q9D-A nrPDB Length = 545 Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 20/112 (17%) Query: 157 AKNFYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALW-- 214 A F G+G +G VP GIAL + G D + GDG+ F+ Y++ A+W Sbjct: 395 ASFFATGSGGIGWGVPAAVGIALGDRARGVDRTVVATIGDGS------FQ-YSIQAIWTA 447 Query: 215 ---KLPCIFIC-ENNRYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCV 262 KLP +F+ N Y + S D K + +PGL++ G+DI + Sbjct: 448 AQHKLPIVFVVLRNGEYAILKSF------ADLEKTPN-VPGLQLPGLDISSI 492 >6A50-A nrPDB Length = 549 Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 62/146 (42%), Gaps = 37/146 (25%) Query: 160 FYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALW----- 214 ++ G +G +P G+ LA + + + GDG+AN Y+++ALW Sbjct: 417 YFCAAGGLGFALPAAIGVQLA----EPERQVIAVIGDGSAN-------YSISALWTAAQY 465 Query: 215 KLPCIFICENN-RYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCVR---------- 263 +P IF+ NN YGM R A + +PGL V G+D + Sbjct: 466 NIPTIFVIMNNGTYGM----LRWFAGV---LEAENVPGLDVPGIDFRALAKGYGVQALKA 518 Query: 264 ---EATKFAAAYCRSGKGPILMELQT 286 E K + S KGP+L+E+ T Sbjct: 519 DNLEQLKGSLQEALSAKGPVLIEVST 544 >2O1S-A nrPDB Length = 621 Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust. Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 8/103 (7%) Query: 138 LTGRRG--GCAKGKGGSMHMY---AKNFYG--GNGIVGAQVPLGAGIALACKYNGKDEVC 190 LTGRR G + KGG +H + ++ Y G + G GIA+A + GK+ Sbjct: 88 LTGRRDKIGTIRQKGG-LHPFPWRGESEYDVLSVGHSSTSISAGIGIAVAAEKEGKNRRT 146 Query: 191 LTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSV 233 + + GDGA G FEA N A + + I +N + +V Sbjct: 147 VCVIGDGAITAGMAFEAMNHAGDIRPDMLVILNDNEMSISENV 189 >3ZHS-A nrPDB Length = 868 Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust. Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 8/115 (6%) Query: 189 VCLTLYGDGA-ANQGQIFEAYNMAALWKLPC---IFICENNRYGMGTSVERAAAS---TD 241 V L L+GD A A QG + E N+A L I I NN+ G T+ + +S TD Sbjct: 279 VPLMLHGDAAFAGQGVVAETLNLALLRGYRTGGTIHIVVNNQIGFTTAPTDSRSSEYCTD 338 Query: 242 YYKRGDFIPGLRVDGMDILCVREATKFAAAYCRSGKGPILMELQTYRYHGHSMSD 296 K P V+G D + A + ++ K +++++ YR GH+ D Sbjct: 339 VAKMIG-APIFHVNGDDPEACAWVARLAVDFRQAFKKDVVIDMLCYRRRGHNEGD 392 >4KXX-A nrPDB Length = 637 Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 8/64 (12%) Query: 173 LGAGIALAC--KYNGK--DEVCLTLY---GDGAANQGQIFEAYNMAALWKLP-CIFICEN 224 LG G+ AC Y GK D+ +Y GDG ++G ++EA A+++KL + I + Sbjct: 125 LGQGLGAACGMAYTGKYFDKASYRVYCLLGDGELSEGSVWEAMAFASIYKLDNLVAILDI 184 Query: 225 NRYG 228 NR G Sbjct: 185 NRLG 188 >4K9Q-A nrPDB Length = 539 Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust. Identities = 26/110 (23%), Positives = 50/110 (45%), Gaps = 21/110 (19%) Query: 159 NFYG-GNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALW--- 214 FY +G +G +P G+AL + +G++ +TL GDG+ Y++ ++ Sbjct: 391 TFYTFASGGLGWDLPAAVGLALGEEVSGRNRPVVTLMGDGSFQ-------YSVQGIYTGV 443 Query: 215 --KLPCIFIC-ENNRYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILC 261 K I++ +N YG+ + + +PGL + G+DI+ Sbjct: 444 QQKTHVIYVVFQNEEYGILKQFAELEQTPN-------VPGLDLPGLDIVA 486 >2RML-A nrPDB Length = 147 Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust. Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 9/54 (16%) Query: 326 NSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIYSSDPPFEVRG 379 N NLA+ E I D A+ TA + +E+LGYH+ + F++ G Sbjct: 38 NVNLAT---------ETSNVIYDPAETGTAAIQEKIEKLGYHVVTEKAEFDIEG 82 >1V0B-A nrPDB Length = 288 Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust. Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 10/70 (14%) Query: 35 TFEIKKCDLHRLEEGPPVTTV--------LTREDGLKYYRMMQTVRRMELKADQLYKQKI 86 TF +KK L + +EG P TT+ L + +K Y ++ T +R+ L + L + Sbjct: 28 TFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHL--DQD 85 Query: 87 IRGFCHLCDG 96 ++ +C+G Sbjct: 86 LKKLLDVCEG 95 >3CF4-A nrPDB Length = 807 Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 39/97 (40%), Gaps = 26/97 (26%) Query: 298 GVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASV---EELKEIDVE-----------VR 343 G+S +T E++ P M + + LA+V +E EID + V Sbjct: 155 GLSPKTLGEVK-------PAMEYVEEQLTQLLATVHAGQESAEIDYDSKALFSGSLDHVG 207 Query: 344 KEIEDAAQ-----FATADPEPPLEELGYHIYSSDPPF 375 EI D Q F ADPE PL E+G PF Sbjct: 208 MEISDIVQVAAYDFPKADPEAPLVEIGMGTIDKSKPF 244 >4H9D-A nrPDB Length = 112 Score = 28.5 bits (62), Expect = 4.7, Method: Composition-based stats. Identities = 10/20 (50%), Positives = 13/20 (65%) Query: 75 ELKADQLYKQKIIRGFCHLC 94 EL+ Q +K +I RG CH C Sbjct: 22 ELRRSQWWKNRIARGICHYC 41 >4V4O-A nrPDB Length = 543 Score = 27.7 bits (60), Expect = 8.7, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 3/57 (5%) Query: 304 REEIQEVRSKSDPIMLLKDRMVNSNLASVEELKE--IDVEVRKEIEDAAQFATADPE 358 RE ++ V + ++P + LK + + A+VE++K I VE RK IE+ A + DPE Sbjct: 100 REGLKNVAAGANP-LALKRGIEKAVEAAVEKIKALAIPVEDRKAIEEVATISANDPE 155 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3EXI-A nrPDB 554 e-158 1X7Z-A nrPDB 391 e-109 3DVA-A nrPDB 370 e-103 1UM9-A nrPDB 363 e-101 1QS0-A nrPDB 337 4e-93 2JGD-B nrPDB 190 1e-48 6A50-A nrPDB 99 2e-21 4Q9D-A nrPDB 93 2e-19 Sequences not found previously or not previously below threshold: 3ZHS-A nrPDB 102 4e-22 4K9Q-A nrPDB 66 4e-11 2O1S-A nrPDB 51 8e-07 4XEU-A nrPDB 48 5e-06 3EYA-A nrPDB 46 2e-05 2R8P-A nrPDB 45 6e-05 5AHK-A nrPDB 44 9e-05 5ND5-A nrPDB 41 9e-04 1UPC-A nrPDB 40 0.002 2VBI-A nrPDB 40 0.002 1V5E-A nrPDB 40 0.002 5NPU-A nrPDB 39 0.004 1ITZ-A nrPDB 39 0.005 2PAN-A nrPDB 38 0.006 2O1X-A nrPDB 37 0.013 1T9B-A nrPDB 37 0.014 4QQ8-A nrPDB 37 0.014 4OTL-A nrPDB 37 0.016 6DEO-A nrPDB 37 0.018 4ZP1-A nrPDB 37 0.020 5WJ1-A nrPDB 36 0.020 1OVM-A nrPDB 36 0.026 4RJK-A nrPDB 36 0.028 4COK-A nrPDB 36 0.028 5EUJ-A nrPDB 36 0.030 5VMB-A nrPDB 35 0.052 1QPB-A nrPDB 35 0.070 6EFG-A nrPDB 35 0.075 3RIM-A nrPDB 34 0.081 4NOM-A nrPDB 34 0.090 4NOJ-A nrPDB 34 0.090 3G8M-A nrPDB 34 0.098 3N0L-A nrPDB 34 0.11 5FL7-G nrPDB 33 0.18 6MXO-A nrPDB 33 0.25 1NLM-A nrPDB 32 0.37 2F5G-A nrPDB 30 1.6 3PGY-A nrPDB 30 1.7 2PT1-A nrPDB 29 2.5 5ZBI-A nrPDB 29 3.3 >3EXI-A nrPDB Length = 382 Score = 554 bits (1426), Expect = e-158, Method: Composition-based stats. Identities = 357/365 (97%), Positives = 360/365 (98%) Query: 26 ASRNFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQK 85 S FANDATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQK Sbjct: 18 GSHMFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQK 77 Query: 86 IIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLPVRAILAELTGRRGGC 145 IIRGFCHLCDGQEACCVGLEAGINPTDHLITA+RAHGFTFTRGL VR ILAELTGR+GGC Sbjct: 78 IIRGFCHLCDGQEACCVGLEAGINPTDHLITAFRAHGFTFTRGLSVREILAELTGRKGGC 137 Query: 146 AKGKGGSMHMYAKNFYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIF 205 AKGKGGSMHMYAKNFYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIF Sbjct: 138 AKGKGGSMHMYAKNFYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIF 197 Query: 206 EAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCVREA 265 EAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCVREA Sbjct: 198 EAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCVREA 257 Query: 266 TKFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMV 325 T+FAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMV Sbjct: 258 TRFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMV 317 Query: 326 NSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIYSSDPPFEVRGANQWIK 385 NSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIYSSDPPFEVRGANQWIK Sbjct: 318 NSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIYSSDPPFEVRGANQWIK 377 Query: 386 FKSVS 390 FKSVS Sbjct: 378 FKSVS 382 >1X7Z-A nrPDB Length = 400 Score = 391 bits (1005), Expect = e-109, Method: Composition-based stats. Identities = 90/322 (27%), Positives = 140/322 (43%), Gaps = 5/322 (1%) Query: 56 LTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLI 115 L +E LK Y+ M + M+ + +Q I F G+E VG A ++ TD + Sbjct: 52 LPKEKVLKLYKSMTLLNTMDRILYESQRQGRI-SFYMTNYGEEGTHVGSAAALDNTDLVF 110 Query: 116 TAYRAHGFTFTRGLPVRAILAELTGRRGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVPL 173 YR G R P+ +A+ G KG+ +H K +F + + Q+P Sbjct: 111 GQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLATQIPQ 170 Query: 174 GAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSV 233 G A A K + V + +G+GAA++G +N AA + P IF C NN Y + T Sbjct: 171 AVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPT 230 Query: 234 ERAAASTDYYKRG--DFIPGLRVDGMDILCVREATKFAAAYCRSGKGPILMELQTYRYHG 291 RG I +RVDG D+ V ATK A + P L+E TYR Sbjct: 231 SEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGH 290 Query: 292 HSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQ 351 H SD +YR+ +E+ + PI L+ +++ E+ K + R+++ +A + Sbjct: 291 HDTSDDSSAYRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRRKVMEAFE 350 Query: 352 FATADPEPPLEELGYHIYSSDP 373 A P+P L +Y P Sbjct: 351 QAERKPKPNPNLLFSDVYQEMP 372 >3DVA-A nrPDB Length = 369 Score = 370 bits (950), Expect = e-103, Method: Composition-based stats. Identities = 97/326 (29%), Positives = 153/326 (46%), Gaps = 13/326 (3%) Query: 56 LTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLI 115 L+ E + R M R ++ ++ L +Q + GF GQEA + + D ++ Sbjct: 42 LSDEQLKELMRRMVYTRILDQRSISLNRQGRL-GFYAPTAGQEASQIASHFALEKEDFIL 100 Query: 116 TAYRAHGFTFTRGLPVRAILAELTGRRGGCAKGKGGSMHMYAKNFYGGNGIVGAQVPLGA 175 YR GLP+ G G +G N I+GAQ A Sbjct: 101 PGYRDVPQIIWHGLPLYQAFLFSRGHFHGNQIPEG-------VNVLPPQIIIGAQYIQAA 153 Query: 176 GIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVER 235 G+AL K GK V +T GDG +QG +E N A +K P IF+ +NNR+ T VE+ Sbjct: 154 GVALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFAASTPVEK 213 Query: 236 AAASTDYYKRGD--FIPGLRVDGMDILCVREATKFAAAYCRSGKGPILMELQTYRYHGHS 293 + ++ IPG++VDGMD L V A K A +G+GP L+E +RY H+ Sbjct: 214 QTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLCFRYGPHT 273 Query: 294 MS-DPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQF 352 MS D YR++ E++ +K DP++ + + L S EE + + ++EI++A + Sbjct: 274 MSGDDPTRYRSK-ELENEWAKKDPLVRFRKFLEAKGLWSEEEENNVIEQAKEEIKEAIKK 332 Query: 353 ATADPEPPLEELGYHIYSSDPPFEVR 378 A P+ + +L I + PF ++ Sbjct: 333 ADETPKQKVTDL-ISIMFEELPFNLK 357 >1UM9-A nrPDB Length = 367 Score = 363 bits (931), Expect = e-101, Method: Composition-based stats. Identities = 96/326 (29%), Positives = 146/326 (44%), Gaps = 13/326 (3%) Query: 56 LTREDGLKYYRMMQTVRRMELKADQLYKQKIIRG---FCHLCDGQEACCVGLEAGINP-T 111 L E + YR M R ++ + Y I G F G EA V + I P Sbjct: 33 LEGEKLRRLYRDMLAARMLD----ERYTILIRTGKTSFIAPAAGHEAAQVAIAHAIRPGF 88 Query: 112 DHLITAYRAHGFTFTRGLPVRAILAELTGRRGGCAKGKGGSMHMYAK--NFYGGNGIVGA 169 D + YR HG G+P++ +L ++ + KG+ H +K NF+ + + Sbjct: 89 DWVFPYYRDHGLALALGIPLKELLGQMLATKADPNKGRQMPEHPGSKALNFFTVASPIAS 148 Query: 170 QVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGM 229 VP AG A++ K +V + +GDGA ++G + N AA+ P +FI ENN Y + Sbjct: 149 HVPPAAGAAISMKLLRTGQVAVCTFGDGATSEGDWYAGINFAAVQGAPAVFIAENNFYAI 208 Query: 230 GTSVERAAASTDYYKRGD--FIPGLRVDGMDILCVREATKFAAAYCRSGKGPILMELQTY 287 S + IPG VDGMD+L K A R G+GP L+EL+ Y Sbjct: 209 SVDYRHQTHSPTIADKAHAFGIPGYLVDGMDVLASYYVVKEAVERARRGEGPSLVELRVY 268 Query: 288 RYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIE 347 RY HS +D YR +EE+ R K DPI + + L + E +++ E+R E+E Sbjct: 269 RYGPHSSADDDSRYRPKEEVAFWRKK-DPIPRFRRFLEARGLWNEEWEEDVREEIRAELE 327 Query: 348 DAAQFATADPEPPLEELGYHIYSSDP 373 + A P E + +++ P Sbjct: 328 RGLKEAEEAGPVPPEWMFEDVFAEKP 353 >1QS0-A nrPDB Length = 407 Score = 337 bits (865), Expect = 4e-93, Method: Composition-based stats. Identities = 93/372 (25%), Positives = 145/372 (38%), Gaps = 16/372 (4%) Query: 13 AGSAQKPASRVLVASRNFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVR 72 AG A+KP V V + + A+ + ++ D +GP + + + R M R Sbjct: 31 AGQARKPP--VDVDAADTADLSYSLVRVLDEQGDAQGPWAEDIDP-QILRQGMRAMLKTR 87 Query: 73 RMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLPVR 132 + + +QK + F G+EA G +N TD YR R + + Sbjct: 88 IFDSRMVVAQRQKKM-SFYMQSLGEEAIGSGQALALNRTDMCFPTYRQQSILMARDVSLV 146 Query: 133 AILAELTGRRGGCAKGKGGSMHMYA--KNFYGGNGIVGAQVPLGAGIALACKYNGKDEVC 190 ++ +L KG+ + F+ +G + Q G A+A G ++ Sbjct: 147 EMICQLLSNERDPLKGRQLPIMYSVREAGFFTISGNLATQFVQAVGWAMASAIKGDTKIA 206 Query: 191 LTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAA-STDYYKRGD-- 247 GDGA + A A +++ P I NN++ + T A ST + RG Sbjct: 207 SAWIGDGATAESDFHTALTFAHVYRAPVILNVVNNQWAISTFQAIAGGESTTFAGRGVGC 266 Query: 248 FIPGLRVDGMDILCVREATKFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEI 307 I LRVDG D + V A+++AA R G GP L+E TYR HS SD YR ++ Sbjct: 267 GIASLRVDGNDFVAVYAASRWAAERARRGLGPSLIEWVTYRAGPHSTSDDPSKYRPADDW 326 Query: 308 QEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATA------DPEPPL 361 DPI LK ++ S EE + E + A + A P Sbjct: 327 SHF-PLGDPIARLKQHLIKIGHWSEEEHQATTAEFEAAVIAAQKEAEQYGTLANGHIPSA 385 Query: 362 EELGYHIYSSDP 373 + +Y P Sbjct: 386 ASMFEDVYKEMP 397 >2JGD-B nrPDB Length = 933 Score = 190 bits (481), Expect = 1e-48, Method: Composition-based stats. Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 13/193 (6%) Query: 191 LTLYGDGAAN-QGQIFEAYNMAALWKLPC---IFICENNRYGMGTSVERAAASTDY-YKR 245 +T++GD A QG + E NM+ + I NN+ G TS A ST Y Sbjct: 352 ITIHGDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCTDI 411 Query: 246 GDFI--PGLRVDGMDILCVREATKFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRT 303 G + P V+ D V T+ A + + K + ++L YR HGH+ +D + + Sbjct: 412 GKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEPSATQP 471 Query: 304 REEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEE 363 Q+++ P + D++ +A++E+ E+ V + ++ DA A+ P Sbjct: 472 L-MYQKIKKHPTPRKIYADKLEQEKVATLEDATEM-VNLYRDALDAGDCVVAEWRP---- 525 Query: 364 LGYHIYSSDPPFE 376 + H ++ P Sbjct: 526 MNMHSFTWSPYLN 538 >3ZHS-A nrPDB Length = 868 Score = 102 bits (253), Expect = 4e-22, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 71/180 (39%), Gaps = 7/180 (3%) Query: 189 VCLTLYGDGA-ANQGQIFEAYNMAALWKLPC---IFICENNRYGMGTSVERAAASTDYYK 244 V L L+GD A A QG + E N+A L I I NN+ G T+ + +S Sbjct: 279 VPLMLHGDAAFAGQGVVAETLNLALLRGYRTGGTIHIVVNNQIGFTTAPTDSRSSEYCTD 338 Query: 245 RGDFI--PGLRVDGMDILCVREATKFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYR 302 I P V+G D + A + ++ K +++++ YR GH+ D + Sbjct: 339 VAKMIGAPIFHVNGDDPEACAWVARLAVDFRQAFKKDVVIDMLCYRRRGHNEGDDPSMTQ 398 Query: 303 TREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLE 362 + +K + ++ S++E ++ + + ++E + +E Sbjct: 399 P-YMYDVIDTKRGSRKAYTEALIGRGDISMKEAEDALRDYQGQLERVFNEVRELEKHEIE 457 >6A50-A nrPDB Length = 549 Score = 99.5 bits (246), Expect = 2e-21, Method: Composition-based stats. Identities = 41/157 (26%), Positives = 65/157 (41%), Gaps = 37/157 (23%) Query: 149 KGGSMHMYAKNFYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAY 208 + +M ++ G +G +P G+ LA + + + GDG+AN Y Sbjct: 406 QRLNMRNPGSYYFCAAGGLGFALPAAIGVQLA----EPERQVIAVIGDGSAN-------Y 454 Query: 209 NMAALW-----KLPCIFICENN-RYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCV 262 +++ALW +P IF+ NN YGM R A + +PGL V G+D + Sbjct: 455 SISALWTAAQYNIPTIFVIMNNGTYGM----LRWFAGV---LEAENVPGLDVPGIDFRAL 507 Query: 263 R-------------EATKFAAAYCRSGKGPILMELQT 286 E K + S KGP+L+E+ T Sbjct: 508 AKGYGVQALKADNLEQLKGSLQEALSAKGPVLIEVST 544 >4Q9D-A nrPDB Length = 545 Score = 92.9 bits (229), Expect = 2e-19, Method: Composition-based stats. Identities = 34/120 (28%), Positives = 51/120 (42%), Gaps = 20/120 (16%) Query: 151 GSMHMYAKNFYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNM 210 A F G+G +G VP GIAL + G D + GDG+ Y++ Sbjct: 389 LPTTHPASFFATGSGGIGWGVPAAVGIALGDRARGVDRTVVATIGDGSFQ-------YSI 441 Query: 211 AALW-----KLPCIFIC-ENNRYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCVRE 264 A+W KLP +F+ N Y + S D K + +PGL++ G+DI + Sbjct: 442 QAIWTAAQHKLPIVFVVLRNGEYAILKSF------ADLEKTPN-VPGLQLPGLDISSIAA 494 >4K9Q-A nrPDB Length = 539 Score = 65.6 bits (158), Expect = 4e-11, Method: Composition-based stats. Identities = 31/138 (22%), Positives = 54/138 (39%), Gaps = 24/138 (17%) Query: 160 FYG-GNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPC 218 FY +G +G +P G+AL + +G++ +TL GDG+ + K Sbjct: 392 FYTFASGGLGWDLPAAVGLALGEEVSGRNRPVVTLMGDGSFQYSV--QGIYTGVQQKTHV 449 Query: 219 IFIC-ENNRYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCVREA------------ 265 I++ +N YG+ + +PGL + G+DI+ +A Sbjct: 450 IYVVFQNEEYGILKQFAELEQTP-------NVPGLDLPGLDIVAQGKAYGAKSLKVETLD 502 Query: 266 -TKFAAAYCRSGKGPILM 282 K A S KG ++ Sbjct: 503 ELKTAYLEALSFKGTSVI 520 >2O1S-A nrPDB Length = 621 Score = 50.9 bits (120), Expect = 8e-07, Method: Composition-based stats. Identities = 53/247 (21%), Positives = 79/247 (31%), Gaps = 29/247 (11%) Query: 35 TFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLC 94 +F+I K L + +L +E K EL+ L G Sbjct: 2 SFDIAKYPTLALVDSTQELRLLPKESLPKLCD--------ELRRYLLDSVSRSSGHFASG 53 Query: 95 DGQEACCVGLEAGIN-PTDHLI--TAYRAHGFTFTRGLPVRAILAELTGRRGGCAKGKG- 150 G V L N P D LI ++A+ LTGRR + Sbjct: 54 LGTVELTVALHYVYNTPFDQLIWDVGHQAYPHKI------------LTGRRDKIGTIRQK 101 Query: 151 GSMHMY-----AKNFYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIF 205 G +H + ++ G + G GIA+A + GK+ + + GDGA G F Sbjct: 102 GGLHPFPWRGESEYDVLSVGHSSTSISAGIGIAVAAEKEGKNRRTVCVIGDGAITAGMAF 161 Query: 206 EAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCVREA 265 EA N A + + I +N + +V G LR G + Sbjct: 162 EAMNHAGDIRPDMLVILNDNEMSISENVGALNNHLAQLLSGKLYSSLREGGKKVFSGVPP 221 Query: 266 TKFAAAY 272 K Sbjct: 222 IKELLKR 228 >4XEU-A nrPDB Length = 673 Score = 48.3 bits (113), Expect = 5e-06, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 47/146 (32%), Gaps = 17/146 (11%) Query: 150 GGSMHMYAKNFYGGNGIVGAQVPLGAGIALACK-----YNGKDEVCL-----TLYGDGAA 199 G + Y G +G + G+ALA K +N + GDG Sbjct: 107 GHPEYGYTAGVETTTGPLGQGIANAVGMALAEKVLAAQFNRDGHAVVDHYTYAFLGDGCM 166 Query: 200 NQGQIFEAYNMAALWKL-PCIFICENNRYGMGTSVERAAA-STDYYKRGDFIPGLR-VDG 256 +G E ++A +L I ++N + V T +R VDG Sbjct: 167 MEGISHEVASLAGTLRLNKLIAFYDDNGISIDGEVHGWFTDDTPKRFEAYGWQVIRNVDG 226 Query: 257 MDILCVREATKFAAAYCRSGKGPILM 282 D + K A R P L+ Sbjct: 227 HD----ADEIKTAIDTARKSDQPTLI 248 >3EYA-A nrPDB Length = 549 Score = 46.3 bits (108), Expect = 2e-05, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 44/136 (32%), Gaps = 28/136 (20%) Query: 165 GIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQ--GQIFEAYNMAALWKLPCIFIC 222 G + +P G + + + GDG + G M KLP + Sbjct: 406 GSMANAMPQALGAQ----ATEPERQVVAMCGDGGFSMLMGDFLSVVQM----KLPVKIVV 457 Query: 223 ENNRYGMGTSVERAAAS----------TDYYKRGD--FIPGLRVDGMDILCVREATKFAA 270 NN ++E A T++ + + I G+RV+ A Sbjct: 458 FNNSVLGFVAMEMKAGGYLTDGTELHDTNFARIAEACGITGIRVEK------ASEVDEAL 511 Query: 271 AYCRSGKGPILMELQT 286 S GP+L+++ Sbjct: 512 QRAFSIDGPVLVDVVV 527 >2R8P-A nrPDB Length = 669 Score = 45.2 bits (105), Expect = 6e-05, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 52/169 (30%), Gaps = 21/169 (12%) Query: 128 GLPVRAILAELTGRRGGCAKGKGGSMHMYAKNFYGGNGIVGAQVPLGAGIALACKYNGK- 186 LP+ + G Y G +G + G+A+A K Sbjct: 81 DLPMEELKNFRQLHSKTP----GHPEVGYTAGVETTTGPLGQGIANAVGMAIAEKTLAAQ 136 Query: 187 ---------DEVCLTLYGDGAANQGQIFEAYNMAALWKL-PCIFICENNRYGMGTSVERA 236 D GDG +G E ++A KL I ++N + VE Sbjct: 137 FNRPGHDIVDHYTYAFMGDGCMMEGISHEVCSLAGTLKLGKLIAFYDDNGISIDGHVEGW 196 Query: 237 AASTD---YYKRGDFIPGLRVDGMDILCVREATKFAAAYCRSGKGPILM 282 + G + +DG D ++ A + A + K +LM Sbjct: 197 FTDDTAMRFEAYGWHV-IRDIDGHDAASIKRAVEEA--RAVTDKPSLLM 242 >5AHK-A nrPDB Length = 588 Score = 44.4 bits (103), Expect = 9e-05, Method: Composition-based stats. Identities = 43/174 (24%), Positives = 65/174 (37%), Gaps = 33/174 (18%) Query: 157 AKNFYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKL 216 A + GG G +G +P G A K + + + GDG A Q I E ++ A KL Sbjct: 432 AMHHSGGLGSMGFAIPAAIGACYAGK-----KPIIVITGDGGA-QLNIQE-LDIIARDKL 484 Query: 217 PCIFICENN-------------RYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCVR 263 P + I NN G +S ++ + K G+ RV+ I+ + Sbjct: 485 PILTIVMNNHSLGMVRGFQEMYFEGRNSSTYWNGYTSQFKKIGEA---YRVESKTIISM- 540 Query: 264 EATKFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPI 317 +A A P+L+E+ SMSD R R E + P Sbjct: 541 QAFSSALESFLESPRPLLLEV--------SMSD-ARECRPRLEYGRAIDQQSPR 585 >5ND5-A nrPDB Length = 692 Score = 40.9 bits (94), Expect = 9e-04, Method: Composition-based stats. Identities = 41/198 (20%), Positives = 72/198 (36%), Gaps = 27/198 (13%) Query: 117 AYRAHGFTFTRGLPVRAILAELTGRRGGCAKGKGGSMHMYAKNFYGGNGIVGAQVPLGAG 176 Y T +P+ I G + G +G + G Sbjct: 96 QYSMMHLTGYDSVPLDQIKQFRQWNSLTP----GHPENFVTPGVEVTTGPLGQGICNAVG 151 Query: 177 IA-----LACKYNGKDEVCL------TLYGDGAANQGQIFEAYNMAALWKL-PCIFICEN 224 +A LA ++N D + + GDG +G EA ++A W L I + ++ Sbjct: 152 LAVAEAHLAARFNKPDVKPIVDHYTYCILGDGCMMEGISNEACSLAGHWGLGKLIALYDD 211 Query: 225 NRYGMGTSVERAAASTDYYKRGDFIPGLRV----DGM-DILCVREATKFAAAYCRSGKGP 279 N+ + + + + D KR + + G V +G D+ +R A A A K P Sbjct: 212 NKISIDGHTDISF-TEDVAKRYEAL-GWHVIHVINGNTDVDGLRAAI--AQAKAVKDK-P 266 Query: 280 ILMELQTY-RYHGHSMSD 296 L+++ T Y + +D Sbjct: 267 TLIKVSTLIGYGSPNKAD 284 >1UPC-A nrPDB Length = 573 Score = 40.2 bits (92), Expect = 0.002, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 46/150 (30%), Gaps = 29/150 (19%) Query: 159 NFYGGNG--IVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKL 216 F G G +P G +A D+ + GDG + A L Sbjct: 428 GFLTSAGCSSFGYGIPAAIGAQMA----RPDQPTFLIAGDGGFHSNS--SDLETIARLNL 481 Query: 217 PCIFICENN-RYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCVREATKFAAAYCRS 275 P + + NN G+ + + P ++ G+D + + EA A + Sbjct: 482 PIVTVVVNNDTNGLIELYQNIGHHRSHD------PAVKFGGVDFVALAEANGVDATRATN 535 Query: 276 GK-------------GPILMEL-QTYRYHG 291 + P L+E+ Y + Sbjct: 536 REELLAALRKGAELGRPFLIEVPVNYDFQP 565 >2VBI-A nrPDB Length = 566 Score = 39.8 bits (91), Expect = 0.002, Method: Composition-based stats. Identities = 34/137 (24%), Positives = 50/137 (36%), Gaps = 25/137 (18%) Query: 165 GIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICEN 224 G +G VP G A+ + D + + GDG+ Q E M ++LP I N Sbjct: 409 GHIGWSVPSAFGNAMGSQ----DRQHVVMVGDGSF-QLTAQEVAQMVR-YELPVIIFLIN 462 Query: 225 NR------------YGMGTSVERAAASTDY-YKRGDFIPGLRVDGMDILCVREATKFAAA 271 NR Y + + A + G GL + + EA A A Sbjct: 463 NRGYVIEIAIHDGPYNYIKNWDYAGLMEVFNAGEGH---GLGLKATTPKELTEAI--ARA 517 Query: 272 YCRSGKGPILMELQTYR 288 + +GP L+E Q R Sbjct: 518 KANT-RGPTLIECQIDR 533 >1V5E-A nrPDB Length = 590 Score = 39.8 bits (91), Expect = 0.002, Method: Composition-based stats. Identities = 33/200 (16%), Positives = 65/200 (32%), Gaps = 32/200 (16%) Query: 153 MHMYAKNFYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAA 212 +HM KN + + A + + L K D + GDGA + N+ Sbjct: 398 LHMTPKNMWR-TSPLFATMGIAIPGGLGAKNTYPDRQVWNIIGDGAFSMTYPDVVTNVR- 455 Query: 213 LWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCVREATKFAAAY 272 + +P I + +N E A Y + G+ +D + EA + A + Sbjct: 456 -YNMPVINVVFSNT-------EYAFIKNKYEDTNKNLFGVDFTDVDYAKIAEA-QGAKGF 506 Query: 273 CRSGKGP---ILMELQTYRYHGHS-------MSDPG---------VSYRTREEIQEVRSK 313 S ++ E GH+ D + +EI+ + + Sbjct: 507 TVSRIEDMDRVMAEAVAANKAGHTVVIDCKITQDRPIPVETLKLDSKLYSEDEIKAYKER 566 Query: 314 SDP--IMLLKDRMVNSNLAS 331 + ++ ++ + L S Sbjct: 567 YEAANLVPFREYLEAEGLES 586 >5NPU-A nrPDB Length = 563 Score = 38.6 bits (88), Expect = 0.004, Method: Composition-based stats. Identities = 34/134 (25%), Positives = 50/134 (37%), Gaps = 19/134 (14%) Query: 165 GIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICEN 224 G +G VP G A+A + + + GDG+ Q E M KLP I N Sbjct: 414 GHIGWSVPATFGYAVA----EPERRNVLMVGDGSF-QLTAQEVAQMVR-RKLPIIIFLIN 467 Query: 225 NR-YGMGTSVERAAAST----DYYKRGDFIPGLRVDGMDILC-----VREATKFAAAYCR 274 NR Y + + + DY + G+ + + EA K A A+ Sbjct: 468 NRGYTIEVKIHDGPYNNIKNWDYAGLMEVFNAEDGKGLGLKATTGGELAEAIKKALAHR- 526 Query: 275 SGKGPILMELQTYR 288 +GP L+E R Sbjct: 527 --EGPTLIECVIDR 538 >1ITZ-A nrPDB Length = 675 Score = 38.6 bits (88), Expect = 0.005, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 55/151 (36%), Gaps = 17/151 (11%) Query: 150 GGSMHMYAKNFYGGNGIVGAQVPLGAGIA-----LACKYNGKDEVCL-----TLYGDGAA 199 G + G +G + G+A LA ++N D + + GDG Sbjct: 112 GHPENFETPGVEVTTGPLGQGIANAVGLALAEKHLAARFNKPDSEIVDHYTYVILGDGCQ 171 Query: 200 NQGQIFEAYNMAALWKL-PCIFICENNRYGMGTSVERAA---ASTDYYKRGDFIPGLRVD 255 +G EA ++A W L I ++N + E A ST + G ++ Sbjct: 172 MEGIANEACSLAGHWGLGKLIAFYDDNHISIDGDTEIAFTEDVSTRFEALGWHTIWVKNG 231 Query: 256 GMDILCVREATKFAAAYCRSGKGPILMELQT 286 +R A K A + K P L+++ T Sbjct: 232 NTGYDDIRAAIKEA--KAVTDK-PTLIKVTT 259 >2PAN-A nrPDB Length = 616 Score = 38.2 bits (87), Expect = 0.006, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 25/64 (39%), Gaps = 6/64 (9%) Query: 164 NGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICE 223 G +G +P G+ A + + GD + + E + A + +P I + Sbjct: 441 AGPLGWTIPAALGVCAAD----PKRNVVAISGD--FDFQFLIEELAVGAQFNIPYIHVLV 494 Query: 224 NNRY 227 NN Y Sbjct: 495 NNAY 498 >2O1X-A nrPDB Length = 629 Score = 37.1 bits (84), Expect = 0.013, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 39/120 (32%), Gaps = 16/120 (13%) Query: 165 GIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICEN 224 G + G+ALA GKD + GDG+ G A N + + + Sbjct: 123 GHASTSLTNALGMALARDAQGKDFHVAAVIGDGSLTGGMALAALNTIGDMGRKMLIVLND 182 Query: 225 NRYGMGTSVERAAASTDYYKRGDFIPGLRV-------DGMDILCVREATKFAAAYCRSGK 277 N + S + F+ GL+V +G V +K A + K Sbjct: 183 NEMSI---------SENVGAMNKFMRGLQVQKWFQEGEGAGKKAVEAVSKPLADFMSRAK 233 >1T9B-A nrPDB Length = 677 Score = 37.1 bits (84), Expect = 0.014, Method: Composition-based stats. Identities = 32/132 (24%), Positives = 49/132 (37%), Gaps = 13/132 (9%) Query: 162 GGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPC-IF 220 GG G +G +P G +A + + + + GD + N + A P I Sbjct: 510 GGLGTMGYGLPAAIGAQVA----KPESLVIDIDGDASFNMT--LTELSSAVQAGTPVKIL 563 Query: 221 ICENNRYGMGTSVERAA----ASTDYYKRGDFIPGLRVDGMDILCVR--EATKFAAAYCR 274 I N GM T + S + DFI G+ L V+ E Sbjct: 564 ILNNEEQGMVTQWQSLFYEHRYSHTHQLNPDFIKLAEAMGLKGLRVKKQEELDAKLKEFV 623 Query: 275 SGKGPILMELQT 286 S KGP+L+E++ Sbjct: 624 STKGPVLLEVEV 635 >4QQ8-A nrPDB Length = 583 Score = 37.1 bits (84), Expect = 0.014, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 58/205 (28%), Gaps = 38/205 (18%) Query: 99 ACCVGLEAGINPT--DHLITAYRAHGFTFTRGLPV-RAILAELTGRRGGCAKGKGGSMHM 155 A E ++P +I + G T + L+E+ R K G H Sbjct: 361 AAKSSSEHALHPFHASQVIAKHVDAGVTVVADGGLTYLWLSEVMSRV----KPGGFLCHG 416 Query: 156 YAKNFYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWK 215 Y + +G G +A + + GDG+ G ++ + Sbjct: 417 YLNS-------MGVGFGTALGAQVAD--LEAGRRTILVTGDGSV--GYSIGEFDTLVRKQ 465 Query: 216 LPCIFICENNR-YGMG-------------TSVERAAASTDYYKRGDFIPGLRVDGMDILC 261 LP I I NN+ +G T S G VD ++ Sbjct: 466 LPLIVIIMNNQSWGWTLHFQQLAVGPNRVTGTRLENGSYHGVAAAFGADGYHVDSVESFS 525 Query: 262 VREATKFAAAYCRSGKGPILMELQT 286 A A + P + + Sbjct: 526 ------AALAQALAHNRPACINVAV 544 >4OTL-A nrPDB Length = 423 Score = 36.7 bits (83), Expect = 0.016, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 42/111 (37%), Gaps = 12/111 (10%) Query: 24 LVASRNFANDATFEIKKCDL-HRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLY 82 L+AS N+ + A + L ++ EG P G +YY + V +E A Sbjct: 41 LIASENYTSPAVMAAQGSQLTNKYAEGYP---------GKRYYGGCEYVDVVEQLAIDRV 91 Query: 83 KQ--KIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLPV 131 KQ G +A A + P D ++ AHG T G PV Sbjct: 92 KQLFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGMSLAHGGHLTHGSPV 142 >6DEO-A nrPDB Length = 682 Score = 36.7 bits (83), Expect = 0.018, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 44/137 (32%), Gaps = 13/137 (9%) Query: 162 GGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFI 221 GG G +G +P G +A D + + + GD + N + A P Sbjct: 515 GGLGTMGYGLPAAIGAQVA----KPDAIVIDIDGDASFNMT--LTELSSAVQAGAPIKVC 568 Query: 222 CENN-RYGMGTSVERAAASTDYYKRGDFIPGL--RVDGMDILCVR----EATKFAAAYCR 274 NN GM T + Y P + M++ +R + K Sbjct: 569 VLNNEEQGMVTQWQSLFYEHRYSHTHQSNPDFMKLAESMNVKGIRITNQQELKSGVKEFL 628 Query: 275 SGKGPILMELQTYRYHG 291 P+L+E+ + Sbjct: 629 DATEPVLLEVIVEKKVP 645 >4ZP1-A nrPDB Length = 568 Score = 36.7 bits (83), Expect = 0.020, Method: Composition-based stats. Identities = 36/134 (26%), Positives = 49/134 (36%), Gaps = 25/134 (18%) Query: 165 GIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICEN 224 G +G VP G A+ + + + GDG+ Q E M L KLP I N Sbjct: 413 GHIGWSVPAAFGYAVGA----PERRNILMVGDGSF-QLTAQEVAQMVRL-KLPVIIFLIN 466 Query: 225 NRYGMGTSVERAAASTDYYKRGDFIPGLRV----DGMDILC-----------VREATKFA 269 N YG +V + K D+ + V G D + EA K A Sbjct: 467 N-YGYTIAVMIHDGPYNNIKNWDYAGLMEVFNGNGGYDSGAGKGLKAKTGGELAEAIKVA 525 Query: 270 AAYCRSGKGPILME 283 A + GP L+E Sbjct: 526 LA---NTDGPTLIE 536 >5WJ1-A nrPDB Length = 590 Score = 36.3 bits (82), Expect = 0.020, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 44/148 (29%), Gaps = 25/148 (16%) Query: 162 GGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFI 221 GG G +G +P G ++A D + + + GDG+ + + LP + Sbjct: 423 GGLGAMGFGLPAAIGASVA----NPDAIVVDIDGDGSFIMNV--QELATIRVENLPVKVL 476 Query: 222 CENNRY-GMGTSVERAAASTDYYKRGDFIPGLR---VDGMDILCVR-----------EAT 266 NN++ GM E + P M + Sbjct: 477 LLNNQHLGMVMQWEDRFYKANRAHTFLGDPAQEDEIFPNMLLFAAACGIPAARVTKKADL 536 Query: 267 KFAAAYCRSGKGPILMELQTYRYHGHSM 294 + A GP L+++ H Sbjct: 537 REAIQTMLDTPGPYLLDVIC----PHQE 560 >1OVM-A nrPDB Length = 552 Score = 36.3 bits (82), Expect = 0.026, Method: Composition-based stats. Identities = 30/131 (22%), Positives = 43/131 (32%), Gaps = 19/131 (14%) Query: 165 GIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICEN 224 G +G + G AC + + L GDGAA Q I E +M + P I + N Sbjct: 408 GSIGYTLAAAFGAQTAC----PNRRVIVLTGDGAA-QLTIQELGSMLRDKQHPIILVLNN 462 Query: 225 NRYGMGTSVERAAASTDYYKRG----DFIPGLRVDGMDILC----VREATKFA--AAYCR 274 Y A Y IP + +D V EA + A Sbjct: 463 EGY--TVERAIHGAEQRYNDIALWNWTHIP--QALSLDPQSECWRVSEAEQLADVLEKVA 518 Query: 275 SGKGPILMELQ 285 + L+E+ Sbjct: 519 HHERLSLIEVM 529 >4RJK-A nrPDB Length = 571 Score = 35.9 bits (81), Expect = 0.028, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 47/132 (35%), Gaps = 28/132 (21%) Query: 167 VGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAAL--WKLPCIFICEN 224 +G +P A+ E +++ GDG G +F A + K P + I N Sbjct: 426 LGVALP----WAIGASLVKPGEKVVSVSGDG----GFLFSAMELETAVRLKAPIVHIVWN 477 Query: 225 N-RYGMGTSVER---------AAASTDYYKRGD--FIPGLRVDGMDILCVREATKFAAAY 272 + Y M + + D K + GLRV+ D L Sbjct: 478 DSTYDMVAFQQLKKYNRTSAVDFGNIDIVKYAESFGATGLRVESPDQLA------DVLRQ 531 Query: 273 CRSGKGPILMEL 284 + +GP+++++ Sbjct: 532 GMNAEGPVIIDV 543 >4COK-A nrPDB Length = 558 Score = 35.9 bits (81), Expect = 0.028, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 40/126 (31%), Gaps = 13/126 (10%) Query: 165 GIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICEN 224 G +G VP G ALA + + + GDG+ A + LP I N Sbjct: 409 GHIGWSVPAAFGNALAA----PERQHVLMVGDGSFQLTAQEVAQMIRH--DLPVIIFLIN 462 Query: 225 N-----RYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILC-VREATKFAAAYCRSG-K 277 N + + DY + +G+ + A R+ Sbjct: 463 NHGYTIEVMIHDGPYNNVKNWDYAGLMEVFNAGEGNGLGLRARTGGELAAAIEQARANRN 522 Query: 278 GPILME 283 GP L+E Sbjct: 523 GPTLIE 528 >5EUJ-A nrPDB Length = 573 Score = 35.9 bits (81), Expect = 0.030, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 48/127 (37%), Gaps = 15/127 (11%) Query: 165 GIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICEN 224 G +G VP G A+ + + + GDG+ Q E M +++P I N Sbjct: 408 GHIGWSVPSAFGNAVGS----PERRHIMMVGDGSF-QLTAQEVAQMIR-YEIPVIIFLIN 461 Query: 225 NRYGMGTSVERAAASTDYYKRGDFIPGLRV------DGMDILCVREA-TKFAAAYCR-SG 276 NR G + +Y K ++ + V G+ + A + A + Sbjct: 462 NR-GYVIEIAIHDGPYNYIKNWNYAGLIDVFNDEDGHGLGLKASTGAELEGAIKKALDNR 520 Query: 277 KGPILME 283 +GP L+E Sbjct: 521 RGPTLIE 527 >5VMB-A nrPDB Length = 425 Score = 35.2 bits (79), Expect = 0.052, Method: Composition-based stats. Identities = 29/125 (23%), Positives = 52/125 (41%), Gaps = 13/125 (10%) Query: 8 VSRVLAGSAQKPASRV-LVASRNFANDATFEIKKCDL-HRLEEGPPVTTVLTREDGLKYY 65 +++ +A ++ + + L+AS N+ + A E + L ++ EG P G +YY Sbjct: 22 LAQAIASEDERQEAHIELIASENYCSPAVMEAQGSKLTNKYAEGYP---------GKRYY 72 Query: 66 RMMQTVRRMELKADQLYKQKIIRGF--CHLCDGQEACCVGLEAGINPTDHLITAYRAHGF 123 + V +E A K+ + G +A A +NP D ++ AHG Sbjct: 73 GGCEFVDVIEQMAIDRAKELFGADYANVQPHAGSQANSAVYLALLNPGDTVLGMSLAHGG 132 Query: 124 TFTRG 128 T G Sbjct: 133 HLTHG 137 >1QPB-A nrPDB Length = 563 Score = 34.8 bits (78), Expect = 0.070, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 3/68 (4%) Query: 165 GIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKL-PCIFICE 223 G +G G A A + + + GDG+ Q + E M W L P +F+ Sbjct: 413 GSIGFTTGATLGAAFAAEEIDPKKRVILFIGDGSL-QLTVQEISTMIR-WGLKPYLFVLN 470 Query: 224 NNRYGMGT 231 N+ Y + Sbjct: 471 NDGYTIEK 478 >6EFG-A nrPDB Length = 563 Score = 34.8 bits (78), Expect = 0.075, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 3/66 (4%) Query: 165 GIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKL-PCIFICE 223 G +G G A A + + + GDG+ Q + E M W L P +F+ Sbjct: 413 GSIGFTTGATLGAAFAAEEIDPKKRVILFIGDGSL-QLTVQEISTMIR-WGLKPYLFVLN 470 Query: 224 NNRYGM 229 N+ Y + Sbjct: 471 NDGYTI 476 >3RIM-A nrPDB Length = 700 Score = 34.4 bits (77), Expect = 0.081, Method: Composition-based stats. Identities = 40/234 (17%), Positives = 76/234 (32%), Gaps = 33/234 (14%) Query: 146 AKGKGGSMHMYAKNFYGGNGIVGAQVPLGAGIALACKYNGK-------------DEVCLT 192 +K G + G +G + G+A+A +Y D Sbjct: 114 SKTPGHPEFRHTPGVEITTGPLGQGLASAVGMAMASRYERGLFDPDAEPGASPFDHYIYV 173 Query: 193 LYGDGAANQGQIFEAYNMAALWKL-PCIFICENNRYGMGTSVERAAASTDYYKR------ 245 + DG +G EA ++AA+ +L I + N+ + A + Sbjct: 174 IASDGDIEEGVTSEASSLAAVQQLGNLIVFYDRNQISIEDDTNIALCEDTAARYRAYGWH 233 Query: 246 ------GDFIPGLRVDGMDILCVREATKF-AAAYCRSGKGPILMELQTYRYHGHSMSDPG 298 G+ + G+ + V + F A P LM+ T + HG ++ D Sbjct: 234 VQEVEGGENVVGIEEAIANAQAVTDRPSFIALRTVIGYPAPNLMD--TGKAHGAALGDDE 291 Query: 299 VSYRTR----EEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIED 348 V+ + + + + + D + + + A E D R+E E Sbjct: 292 VAAVKKIVGFDPDKTFQVREDVLTHTRGLVARGKQAHERWQLEFDAWARREPER 345 >4NOM-A nrPDB Length = 441 Score = 34.4 bits (77), Expect = 0.090, Method: Composition-based stats. Identities = 30/172 (17%), Positives = 53/172 (30%), Gaps = 17/172 (9%) Query: 42 DLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACC 101 D+ EE P V+ R +G Y+ + E + + ++RG + + Sbjct: 75 DIANSEENPTPGVVINRPNGTDVYKGVLKDYTGEDVTPENF-LAVLRG---DAEAVKGKG 130 Query: 102 VGLEAGINPTDHLITAYRAHGFTFTRGLPVRAILAELTGRRGGCAKG-KGGSMH-MYAKN 159 G P DH+ + HG T P + K + H MY K Sbjct: 131 SGKVLKSGPRDHVFIYFTDHGATGILVFPNDDL------HVKDLNKTIRYMYEHKMYQKM 184 Query: 160 FY----GGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDG-AANQGQIFE 206 + +G + +P + N K+ Y + G + Sbjct: 185 VFYIEACESGSMMNHLPDDINVYATTAANPKESSYACYYDEERGTYLGDWYS 236 >4NOJ-A nrPDB Length = 263 Score = 34.4 bits (77), Expect = 0.090, Method: Composition-based stats. Identities = 30/172 (17%), Positives = 53/172 (30%), Gaps = 17/172 (9%) Query: 42 DLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACC 101 D+ EE P V+ R +G Y+ + E + + ++RG + + Sbjct: 49 DIANSEENPTPGVVINRPNGTDVYKGVLKDYTGEDVTPENF-LAVLRG---DAEAVKGKG 104 Query: 102 VGLEAGINPTDHLITAYRAHGFTFTRGLPVRAILAELTGRRGGCAKG-KGGSMH-MYAKN 159 G P DH+ + HG T P + K + H MY K Sbjct: 105 SGKVLKSGPRDHVFIYFTDHGATGILVFPNDDL------HVKDLNKTIRYMYEHKMYQKM 158 Query: 160 FY----GGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDG-AANQGQIFE 206 + +G + +P + N K+ Y + G + Sbjct: 159 VFYIEACESGSMMNHLPDDINVYATTAANPKESSYACYYDEERGTYLGDWYS 210 >3G8M-A nrPDB Length = 417 Score = 34.4 bits (77), Expect = 0.098, Method: Composition-based stats. Identities = 27/111 (24%), Positives = 43/111 (38%), Gaps = 12/111 (10%) Query: 24 LVASRNFANDATFEIKKCDL-HRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLY 82 L+AS N+ + + + L ++ EG P G +YY + V +E A Sbjct: 32 LIASENYTSPRVMQAQGSQLTNKFAEGYP---------GKRYYGGCEYVDIVEQLAIDRA 82 Query: 83 KQKIIRGF--CHLCDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLPV 131 K+ + G +A A + P D ++ AHG T G PV Sbjct: 83 KELFGADYANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHGSPV 133 >3N0L-A nrPDB Length = 417 Score = 34.0 bits (76), Expect = 0.11, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 42/108 (38%), Gaps = 12/108 (11%) Query: 24 LVASRNFANDATFEIKKCDL-HRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLY 82 ++AS NF E+ L ++ EG P G +YY + V +E A + Sbjct: 30 MIASENFTLPEVMEVMGSILTNKYAEGYP---------GKRYYGGCEFVDEIETLAIERC 80 Query: 83 KQKIIRGF--CHLCDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRG 128 K+ F G +A A INP D ++ +HG T G Sbjct: 81 KKLFNCKFANVQPNSGSQANQGVYAALINPGDKILGMDLSHGGHLTHG 128 >5FL7-G nrPDB Length = 293 Score = 33.2 bits (74), Expect = 0.18, Method: Composition-based stats. Identities = 40/214 (18%), Positives = 79/214 (36%), Gaps = 21/214 (9%) Query: 15 SAQKPASRVLVASRNFANDATFEIKKCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRM 74 +A +PA+R + A+RN+A E++ + +E+ ++ K R M T + Sbjct: 6 TAARPAARSVGATRNYATLREIEMRLKSIKNIEKITNTMKIVASTKLGKAQRAMATSKVY 65 Query: 75 ELKADQLYK-------QKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGFTFTR 127 ++++++ + I + + + C + + + T R F Sbjct: 66 NEASEKVFENSETAVPENIEKRLWVVVSSDKGLCGSIHSQLART------VRRKLLDFES 119 Query: 128 GLPVRAILAELTGRRGGCAKGKGGSMHMYAKNFYGGNGIVGAQVPLGAGIA---LACKYN 184 G + I+A G + G+ M +GG G A IA LA Sbjct: 120 GEKLIDIVA--VGEKIKAQLGRSNPEQMRLS--FGGTGKEAPTFEEAAHIADEILALDTQ 175 Query: 185 GKD-EVCLTLYGDGAANQGQIFEAYNMAALWKLP 217 D E+ G + + + E+Y+ A+ P Sbjct: 176 YDDIEIVYNKVLSGISFEPIMKESYSAKAIEDAP 209 >6MXO-A nrPDB Length = 442 Score = 32.8 bits (73), Expect = 0.25, Method: Composition-based stats. Identities = 4/36 (11%), Positives = 9/36 (25%) Query: 134 ILAELTGRRGGCAKGKGGSMHMYAKNFYGGNGIVGA 169 + A G K + + + G + Sbjct: 305 LYAMCRGIEHDPVKPRQLPKTIGCSKNFPGKTALAT 340 >1NLM-A nrPDB Length = 364 Score = 32.5 bits (72), Expect = 0.37, Method: Composition-based stats. Identities = 23/172 (13%), Positives = 43/172 (25%), Gaps = 10/172 (5%) Query: 113 HLITAYRAHGFTFTRGLPVRAILAELTGRRGGCAKGKGGSMHMYAKNFYGGNGIVGAQVP 172 H+ +G VR + + H +F +G+ G + Sbjct: 19 HVFPGLAVAHHLMAQGWQVRWL------GTADRMEADLVPKHGIEIDFIRISGLRGKGIK 72 Query: 173 L--GAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALW--KLPCIFICENNRYG 228 A + + + + D G A W +P + +N G Sbjct: 73 ALIAAPLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGIAG 132 Query: 229 MGTSVERAAASTDYYKRGDFIPGLRVDGMDILCVREATKFAAAYCRSGKGPI 280 + A+ P V G + A +GP+ Sbjct: 133 LTNKWLAKIATKVMQAFPGAFPNAEVVGNPVRTDVLALPLPQQRLAGREGPV 184 >2F5G-A nrPDB Length = 133 Score = 30.1 bits (66), Expect = 1.6, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 30/104 (28%), Gaps = 5/104 (4%) Query: 262 VREATKFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLK 321 + E TK G ++ L+ H H + Y + KS ++LK Sbjct: 32 IAEYTKEVLKSIAEELGCEIIALEVMPDHIHLFVNCPPRYAPSYLANYFKGKS-ARLILK 90 Query: 322 DR--MVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEE 363 + L + V E+ ++ EE Sbjct: 91 KFPQLNKGKLWTRSYFVATAGNVSSEVIK--KYIEEQWRKEGEE 132 >3PGY-A nrPDB Length = 415 Score = 30.1 bits (66), Expect = 1.7, Method: Composition-based stats. Identities = 27/111 (24%), Positives = 40/111 (36%), Gaps = 12/111 (10%) Query: 24 LVASRNFANDATFEIKKCDL-HRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLY 82 L+AS NF ++A E + L ++ EG P G +YY + V E A Sbjct: 31 LIASENFVSEAVMEAQGSVLTNKYAEGYP---------GRRYYGGCEFVDVTESIAIDRA 81 Query: 83 KQ--KIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLPV 131 K G +A + D ++ +HG T G PV Sbjct: 82 KALFGAEHVNVQPHSGPQANMAVYLVALEMGDTVLGMNLSHGGHLTHGAPV 132 >2PT1-A nrPDB Length = 334 Score = 29.4 bits (64), Expect = 2.5, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 30/70 (42%) Query: 148 GKGGSMHMYAKNFYGGNGIVGAQVPLGAGIALACKYNGKDEVCLTLYGDGAANQGQIFEA 207 G+ +++Y+ Y + + A+ GI + DE+ + +GA + + Sbjct: 16 GEQQEINLYSSRHYNTDNELYAKFTAETGIKVNLIEGKADELLERIKSEGANSPADVLLT 75 Query: 208 YNMAALWKLP 217 ++A LW+ Sbjct: 76 VDLARLWRAE 85 >5ZBI-A nrPDB Length = 532 Score = 29.0 bits (63), Expect = 3.3, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 28/86 (32%), Gaps = 5/86 (5%) Query: 50 PPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGIN 109 P T++ D Y+ + E Q + I+ L G G Sbjct: 165 PYPGTIINSPDKKDVYKGVPKDYTGEDVNVQNFLAVILGNKTALTGG-----SGKVLDTR 219 Query: 110 PTDHLITAYRAHGFTFTRGLPVRAIL 135 P DH+ Y HG+ G+P L Sbjct: 220 PNDHIFIYYTDHGYPGVLGMPTEPYL 245 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.308 0.124 0.312 Lambda K H 0.267 0.0382 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,450,401 Number of Sequences: 36641 Number of extensions: 506924 Number of successful extensions: 1479 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 25 Number of HSP's successfully gapped in prelim test: 47 Number of HSP's that attempted gapping in prelim test: 1421 Number of HSP's gapped (non-prelim): 74 length of query: 390 length of database: 10,336,785 effective HSP length: 99 effective length of query: 291 effective length of database: 6,709,326 effective search space: 1952413866 effective search space used: 1952413866 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 60 (27.8 bits)