BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P35354 (604 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5F1A-A nrPDB 1164 0.0 3QH0-A nrPDB 1114 0.0 5WBE-A nrPDB 782 0.0 6ERC-A nrPDB 82 7e-16 4KVK-A nrPDB 71 1e-12 4HHR-A nrPDB 65 1e-10 6AZP-A nrPDB 47 2e-05 5MFA-A nrPDB 47 2e-05 1CXP-C nrPDB 47 3e-05 3ERH-A nrPDB 41 0.002 2VJ2-A nrPDB 39 0.004 5BO1-A nrPDB 39 0.005 1WHE-A nrPDB 39 0.006 1IQG-L nrPDB 39 0.007 5FMA-A nrPDB 39 0.007 1NFU-B nrPDB 39 0.010 2H9E-L nrPDB 38 0.010 4ZH8-B nrPDB 38 0.013 5MW7-A nrPDB 35 0.084 5MWB-A nrPDB 35 0.092 4D90-A nrPDB 34 0.19 4BXW-A nrPDB 33 0.31 4CUD-A nrPDB 33 0.38 1DAN-L nrPDB 32 0.75 1QFK-L nrPDB 32 0.80 1TOZ-A nrPDB 32 0.98 4CC0-A nrPDB 31 1.8 3VTI-A nrPDB 31 1.9 4XL1-A nrPDB 30 2.9 2DPN-A nrPDB 30 3.8 1KXL-A nrPDB 30 4.4 5L81-A nrPDB 29 6.5 1T7V-A nrPDB 29 6.7 4XBM-A nrPDB 29 7.6 3O84-A nrPDB 28 8.5 >5F1A-A nrPDB Length = 553 Score = 1164 bits (3010), Expect = 0.0, Method: Compositional matrix adjust. Identities = 552/552 (100%), Positives = 552/552 (100%) Query: 19 NPCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENCSTPEFLTRIKLFLKPTPNTVHYIL 78 NPCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENCSTPEFLTRIKLFLKPTPNTVHYIL Sbjct: 2 NPCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENCSTPEFLTRIKLFLKPTPNTVHYIL 61 Query: 79 THFKGFWNVVNNIPFLRNAIMSYVLTSRSHLIDSPPTYNADYGYKSWEAFSNLSYYTRAL 138 THFKGFWNVVNNIPFLRNAIMSYVLTSRSHLIDSPPTYNADYGYKSWEAFSNLSYYTRAL Sbjct: 62 THFKGFWNVVNNIPFLRNAIMSYVLTSRSHLIDSPPTYNADYGYKSWEAFSNLSYYTRAL 121 Query: 139 PPVPDDCPTPLGVKGKKQLPDSNEIVEKLLLRRKFIPDPQGSNMMFAFFAQHFTHQFFKT 198 PPVPDDCPTPLGVKGKKQLPDSNEIVEKLLLRRKFIPDPQGSNMMFAFFAQHFTHQFFKT Sbjct: 122 PPVPDDCPTPLGVKGKKQLPDSNEIVEKLLLRRKFIPDPQGSNMMFAFFAQHFTHQFFKT 181 Query: 199 DHKRGPAFTNGLGHGVDLNHIYGETLARQRKLRLFKDGKMKYQIIDGEMYPPTVKDTQAE 258 DHKRGPAFTNGLGHGVDLNHIYGETLARQRKLRLFKDGKMKYQIIDGEMYPPTVKDTQAE Sbjct: 182 DHKRGPAFTNGLGHGVDLNHIYGETLARQRKLRLFKDGKMKYQIIDGEMYPPTVKDTQAE 241 Query: 259 MIYPPQVPEHLRFAVGQEVFGLVPGLMMYATIWLREHNRVCDVLKQEHPEWGDEQLFQTS 318 MIYPPQVPEHLRFAVGQEVFGLVPGLMMYATIWLREHNRVCDVLKQEHPEWGDEQLFQTS Sbjct: 242 MIYPPQVPEHLRFAVGQEVFGLVPGLMMYATIWLREHNRVCDVLKQEHPEWGDEQLFQTS 301 Query: 319 RLILIGETIKIVIEDYVQHLSGYHFKLKFDPELLFNKQFQYQNRIAAEFNTLYHWHPLLP 378 RLILIGETIKIVIEDYVQHLSGYHFKLKFDPELLFNKQFQYQNRIAAEFNTLYHWHPLLP Sbjct: 302 RLILIGETIKIVIEDYVQHLSGYHFKLKFDPELLFNKQFQYQNRIAAEFNTLYHWHPLLP 361 Query: 379 DTFQIHDQKYNYQQFIYNNSILLEHGITQFVESFTRQIAGRVAGGRNVPPAVQKVSQASI 438 DTFQIHDQKYNYQQFIYNNSILLEHGITQFVESFTRQIAGRVAGGRNVPPAVQKVSQASI Sbjct: 362 DTFQIHDQKYNYQQFIYNNSILLEHGITQFVESFTRQIAGRVAGGRNVPPAVQKVSQASI 421 Query: 439 DQSRQMKYQSFNEYRKRFMLKPYESFEELTGEKEMSAELEALYGDIDAVELYPALLVEKP 498 DQSRQMKYQSFNEYRKRFMLKPYESFEELTGEKEMSAELEALYGDIDAVELYPALLVEKP Sbjct: 422 DQSRQMKYQSFNEYRKRFMLKPYESFEELTGEKEMSAELEALYGDIDAVELYPALLVEKP 481 Query: 499 RPDAIFGETMVEVGAPFSLKGLMGNVICSPAYWKPSTFGGEVGFQIINTASIQSLICNNV 558 RPDAIFGETMVEVGAPFSLKGLMGNVICSPAYWKPSTFGGEVGFQIINTASIQSLICNNV Sbjct: 482 RPDAIFGETMVEVGAPFSLKGLMGNVICSPAYWKPSTFGGEVGFQIINTASIQSLICNNV 541 Query: 559 KGCPFTSFSVPD 570 KGCPFTSFSVPD Sbjct: 542 KGCPFTSFSVPD 553 >3QH0-A nrPDB Length = 610 Score = 1114 bits (2882), Expect = 0.0, Method: Compositional matrix adjust. Identities = 523/610 (85%), Positives = 562/610 (92%), Gaps = 6/610 (0%) Query: 1 MLARALLLCAVLALSHTAN------PCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENC 54 ML RA+LLCA L LS AN PCCS+PCQNRG CMS GFDQYKCDCTRTGFYGENC Sbjct: 1 MLFRAVLLCAALGLSQAANHHHHHHPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENC 60 Query: 55 STPEFLTRIKLFLKPTPNTVHYILTHFKGFWNVVNNIPFLRNAIMSYVLTSRSHLIDSPP 114 +TPEFLTRIKL LKPTPNTVHYILTHFKG WN+VNNIPFLR+ IM YVLTSRS+LIDSPP Sbjct: 61 TTPEFLTRIKLLLKPTPNTVHYILTHFKGVWNIVNNIPFLRSLIMKYVLTSRSYLIDSPP 120 Query: 115 TYNADYGYKSWEAFSNLSYYTRALPPVPDDCPTPLGVKGKKQLPDSNEIVEKLLLRRKFI 174 TYN YGYKSWEAFSNLSYYTRALPPV DDCPTP+GVKG K+LPDS E++EK+LLRR+FI Sbjct: 121 TYNVHYGYKSWEAFSNLSYYTRALPPVADDCPTPMGVKGNKELPDSKEVLEKVLLRREFI 180 Query: 175 PDPQGSNMMFAFFAQHFTHQFFKTDHKRGPAFTNGLGHGVDLNHIYGETLARQRKLRLFK 234 PDPQGSNMMFAFFAQHFTHQFFKTDHKRGP FT GLGHGVDLNHIYGETL RQ KLRLFK Sbjct: 181 PDPQGSNMMFAFFAQHFTHQFFKTDHKRGPGFTRGLGHGVDLNHIYGETLDRQHKLRLFK 240 Query: 235 DGKMKYQIIDGEMYPPTVKDTQAEMIYPPQVPEHLRFAVGQEVFGLVPGLMMYATIWLRE 294 DGK+KYQ+I GE+YPPTVKDTQ EMIYPP +PE+L+FAVGQEVFGLVPGLMMYATIWLRE Sbjct: 241 DGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQFAVGQEVFGLVPGLMMYATIWLRE 300 Query: 295 HNRVCDVLKQEHPEWGDEQLFQTSRLILIGETIKIVIEDYVQHLSGYHFKLKFDPELLFN 354 HNRVCD+LKQEHPEWGDEQLFQTSRLILIGETIKIVIEDYVQHLSGYHFKLKFDPELLFN Sbjct: 301 HNRVCDILKQEHPEWGDEQLFQTSRLILIGETIKIVIEDYVQHLSGYHFKLKFDPELLFN 360 Query: 355 KQFQYQNRIAAEFNTLYHWHPLLPDTFQIHDQKYNYQQFIYNNSILLEHGITQFVESFTR 414 +QFQYQNRIA+EFNTLYHWHPLLPDTF I DQ+Y+++QF+YNNSILLEHG+TQFVESFTR Sbjct: 361 QQFQYQNRIASEFNTLYHWHPLLPDTFNIEDQEYSFKQFLYNNSILLEHGLTQFVESFTR 420 Query: 415 QIAGRVAGGRNVPPAVQKVSQASIDQSRQMKYQSFNEYRKRFMLKPYESFEELTGEKEMS 474 QIAGRVAGGRNVP AVQ V++ASIDQSR+MKYQS NEYRKRF LKPY SFEELTGEKEM+ Sbjct: 421 QIAGRVAGGRNVPIAVQAVAKASIDQSREMKYQSLNEYRKRFSLKPYTSFEELTGEKEMA 480 Query: 475 AELEALYGDIDAVELYPALLVEKPRPDAIFGETMVEVGAPFSLKGLMGNVICSPAYWKPS 534 AEL+ALY DID +ELYPALLVEKPRPDAIFGETMVE+GAPFSLKGLMGN ICSP YWKPS Sbjct: 481 AELKALYSDIDVMELYPALLVEKPRPDAIFGETMVELGAPFSLKGLMGNPICSPQYWKPS 540 Query: 535 TFGGEVGFQIINTASIQSLICNNVKGCPFTSFSVPDPELIKTVTINASSSRSGLDDINPT 594 TFGGEVGF+IINTASIQSLICNNVKGCPFTSF+V DP+ KT TI AS+S S LDDINPT Sbjct: 541 TFGGEVGFKIINTASIQSLICNNVKGCPFTSFNVQDPQPTKTATIAASASHSRLDDINPT 600 Query: 595 VLLKERSTEL 604 VL+K RSTEL Sbjct: 601 VLIKRRSTEL 610 >5WBE-A nrPDB Length = 600 Score = 782 bits (2019), Expect = 0.0, Method: Compositional matrix adjust. Identities = 352/555 (63%), Positives = 444/555 (80%), Gaps = 1/555 (0%) Query: 18 ANPCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENCSTPEFLTRIKLFLKPTPNTVHYI 77 NPCC +PCQ++G+C+ G D+Y+CDCTRTG+ G NC+ PE T ++ L+P+P+ +H++ Sbjct: 33 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTIPEIWTWLRTTLRPSPSFIHFL 92 Query: 78 LTHFKGFWNVVNNIPFLRNAIMSYVLTSRSHLIDSPPTYNADYGYKSWEAFSNLSYYTRA 137 LTH + W+ VN F+R+ +M VLT RS+LI SPPTYN + Y SWE+FSN+SYYTR Sbjct: 93 LTHGRWLWDFVNAT-FIRDTLMRLVLTVRSNLIPSPPTYNIAHDYISWESFSNVSYYTRI 151 Query: 138 LPPVPDDCPTPLGVKGKKQLPDSNEIVEKLLLRRKFIPDPQGSNMMFAFFAQHFTHQFFK 197 LP VP DCPTP+ KGKKQLPD+ + + LLRRKFIPDPQ +N+MFAFFAQHFTHQFFK Sbjct: 152 LPSVPRDCPTPMDTKGKKQLPDAEFLSRRFLLRRKFIPDPQSTNLMFAFFAQHFTHQFFK 211 Query: 198 TDHKRGPAFTNGLGHGVDLNHIYGETLARQRKLRLFKDGKMKYQIIDGEMYPPTVKDTQA 257 T K GP FT LGHGVDL HIYG+ L RQ +LRLFKDGK+KYQ+++GE+YPP+V++ Sbjct: 212 TSGKMGPGFTKALGHGVDLGHIYGDNLERQYQLRLFKDGKLKYQMLNGEVYPPSVEEAPV 271 Query: 258 EMIYPPQVPEHLRFAVGQEVFGLVPGLMMYATIWLREHNRVCDVLKQEHPEWGDEQLFQT 317 M YP +P + AVGQEVFGL+PGLM+YATIWLREHNRVCD+LK EHP WGDEQLFQT Sbjct: 272 LMHYPRGIPPQSQMAVGQEVFGLLPGLMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQT 331 Query: 318 SRLILIGETIKIVIEDYVQHLSGYHFKLKFDPELLFNKQFQYQNRIAAEFNTLYHWHPLL 377 +RLILIGETIKIVIE+YVQ LSGY +LKFDPELLF QFQY+NRIA EFN LYHWHPL+ Sbjct: 332 ARLILIGETIKIVIEEYVQQLSGYFLQLKFDPELLFGAQFQYRNRIAMEFNQLYHWHPLM 391 Query: 378 PDTFQIHDQKYNYQQFIYNNSILLEHGITQFVESFTRQIAGRVAGGRNVPPAVQKVSQAS 437 PD+F++ Q Y+Y+QF++N S+L+++G+ V++F+RQ AGR+ GGRN+ + V+ Sbjct: 392 PDSFRVGPQDYSYEQFLFNTSMLVDYGVEALVDAFSRQPAGRIGGGRNIDHHILHVAVDV 451 Query: 438 IDQSRQMKYQSFNEYRKRFMLKPYESFEELTGEKEMSAELEALYGDIDAVELYPALLVEK 497 I +SR ++ Q FNEYRKRF +KPY SF+ELTGEKEM+AELE LYGDIDA+E YP LL+EK Sbjct: 452 IKESRVLRLQPFNEYRKRFGMKPYTSFQELTGEKEMAAELEELYGDIDALEFYPGLLLEK 511 Query: 498 PRPDAIFGETMVEVGAPFSLKGLMGNVICSPAYWKPSTFGGEVGFQIINTASIQSLICNN 557 P++IFGE+M+E+GAPFSLKGL+GN ICSP YWK STFGGEVGF ++ TA+++ L+C N Sbjct: 512 CHPNSIFGESMIEMGAPFSLKGLLGNPICSPEYWKASTFGGEVGFNLVKTATLKKLVCLN 571 Query: 558 VKGCPFTSFSVPDPE 572 K CP+ SF VPDP Sbjct: 572 TKTCPYVSFHVPDPR 586 >6ERC-A nrPDB Length = 511 Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 75/321 (23%), Positives = 135/321 (42%), Gaps = 32/321 (9%) Query: 208 NGLGHGVDLNHIYGETLARQRKLRLFKDGKMKYQIID-GEMYPPTV----KDTQAEMIYP 262 N LG +D N +YG + + LR G+MK + D G++ P V D A + Sbjct: 144 NSLGSYIDGNVLYGNSEEICKNLRSLSGGEMKMTVTDVGDLPPKNVPGVPMDNDANLF-- 201 Query: 263 PQVPEHLRFAVGQEVFGLVPGLMMYATIWLREHNRVCDVLKQEHPEWGDEQLFQTSRLIL 322 P ++VG+ PGL+ T+ LR+HNR+ + HPEW DE++FQ SR + Sbjct: 202 ---PIDQLYSVGERRGNENPGLLSIHTLLLRDHNRLARKFARLHPEWDDERVFQQSRSCI 258 Query: 323 IGETIKIVIEDYV-------QHLSGYHFKLKFDPELLF-NKQFQYQNRIAAEFNTLYHWH 374 I + KI ++Y+ +GY + F F++ + F Y + Sbjct: 259 IEQIQKITYDEYLPTTLGSFPSYTGYDANVNAQVSNEFTTTAFRFGHSEVGPFMEYYSEN 318 Query: 375 -------PLLPDTFQIHDQKYNYQQFIYNNSILLEHGITQFVESFTRQ-IAGRVAGGRNV 426 P+ F H + I I E I ++ S R + G+ G Sbjct: 319 GTRLQPLPIKFSYFNPHALNRGVEPLIRGLIINEEENIDIYMISDLRNFLFGKPGQGG-- 376 Query: 427 PPAVQKVSQASIDQSRQMKYQSFNEYRKRFMLKPYESFEELTGEKEMSAELEALYGDIDA 486 ++ ++ ++R +N R++ L+P +++ ++T + ++ L+ Y +D Sbjct: 377 ----LDLASRNLQRNRDHGIPPYNSLRRQLGLRPVQTWSDITSDPQIQNRLKNAYKSVDD 432 Query: 487 VELYPALLVEKPRPDAIFGET 507 ++ Y L E + G+T Sbjct: 433 IDSYVGGLAEDHMEGSCVGQT 453 >4KVK-A nrPDB Length = 621 Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 104/487 (21%), Positives = 185/487 (37%), Gaps = 134/487 (27%) Query: 126 EAFSNLSYYTRALPPVPDDCPTPLGVKGKKQLPDSNEIVEKLLLRRKFIPDPQGSNMMFA 185 EA S +++ R + PV + + PD + KLL RR++ + N++ A Sbjct: 101 EAGSQNTFFGRNMEPVDQ--------QDELMSPDPFVVATKLLARREYKDTGKQFNILAA 152 Query: 186 FFAQHFTHQFFKTDH-----------------------------KRGPAFTNGLGHG--- 213 + Q H + DH K P ++G+ G Sbjct: 153 AWIQFMVHDWM--DHMEDTGQIGITAPKEVANECPLKSFKFHPTKELPTNSDGIKIGHYN 210 Query: 214 -----VDLNHIYGETLARQRKLRLFKDGKMKYQIIDGEMYPPTVKDTQAEMIYPPQVPEH 268 D + +YG R KLR + DGK+ + D + V Sbjct: 211 IRTAWWDGSAVYGNNEERAEKLRTYVDGKL------------VIGDDGLLLHKENGV--- 255 Query: 269 LRFAVGQEVFGLVPGLMMYATIWLREHNRVCDVLKQEHPEWGDEQLFQTSRLIL------ 322 A+ ++ G+ + ++++EHN VCD +K+EHP DE+L++ ++L+ Sbjct: 256 ---ALSGDIRNSWAGVSILQALFVKEHNAVCDAIKEEHPNLSDEELYRYAKLVTSAVIAK 312 Query: 323 ---IGETIKIV--------------------IEDYVQHLSGYHFKLKFDPELLFNKQFQY 359 I T++++ I+D H+ G + N Y Sbjct: 313 VHTIDWTVELLKTKTMRAAMRANWYGLLGKKIKDTFGHIGGPILGGLVGLKKPNNHGVPY 372 Query: 360 QNRIAAEFNTLYHWHPLLPDTFQIHDQKYNYQQFIYNNS--ILLEHGITQFVE------- 410 + EF ++Y H L+P T ++ D Q NNS L + I + + Sbjct: 373 S--LTEEFTSVYRMHSLIPSTLKLRDPT---GQPDANNSPPCLEDIDIGEMIGLKGEEQL 427 Query: 411 ---SFTRQI--AGRVAGG-----------RNVPPA-------VQKVSQASID--QSRQMK 445 F +Q G A G RN+ P ++ A+++ + R+ Sbjct: 428 SKIGFEKQALSMGYQACGALELWNYPSFFRNLIPQNLDGTNRSDRIDLAALEVYRDRERS 487 Query: 446 YQSFNEYRKRFMLKPYESFEELTGEKEMSAELEALYG-DIDAVELYPALLVEKPRPDAIF 504 +NE+R+R L P +S+E+LT +K+ + A+YG D++ ++L L+ EK Sbjct: 488 VPRYNEFRRRLFLIPIKSWEDLTSDKDAIETIRAIYGDDVEKLDLLVGLMAEKKIKGFAI 547 Query: 505 GETMVEV 511 ET + Sbjct: 548 SETAFNI 554 >4HHR-A nrPDB Length = 652 Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 102/455 (22%), Positives = 166/455 (36%), Gaps = 126/455 (27%) Query: 144 DCPTPLGVKGKKQLPDSNEIVEKLLLRRKFIPDPQGSNMMFAFFAQHFTH---------- 193 +CP P+ K K + PD + KLL R+KFI + NM+ A + Q H Sbjct: 127 NCP-PVDQKSKLRRPDPMVVATKLLGRKKFIDTGKQFNMIAASWIQFMIHDWIDHLEDTH 185 Query: 194 -------------------QFFKTDHKRGPAFTNGLGH------GVDLNHIYGETLARQR 228 +F KT F G D + IYG Sbjct: 186 QIELVAPKEVASKCPLSSFRFLKTKEVPTGFFEIKTGSQNIRTPWWDSSVIYGSNSKTLD 245 Query: 229 KLRLFKDGKMKYQIIDGEMYPPTVKDTQAEMIYPPQVPEHLRFAVGQEVFGLVPGLMMYA 288 ++R +KDGK+K G + + D A+ ++ G+ Sbjct: 246 RVRTYKDGKLKISEETGLL----LHDEDG-------------LAISGDIRNSWAGVSALQ 288 Query: 289 TIWLREHNRVCDVLKQEHPEWGDEQLFQTSRLILIGETIKIVIEDYVQHLSGYHFKLKFD 348 ++++EHN VCD LK E + DE L++ +RL+ KI D+ L LK D Sbjct: 289 ALFIKEHNAVCDALKDEDDDLEDEDLYRYARLVTSAVVAKIHTIDWTVQL------LKTD 342 Query: 349 PEL---------LFNKQFQY-------------------QNR-----IAAEFNTLYHWHP 375 L L K+F+ QN + +F ++Y H Sbjct: 343 TLLAGMRANWYGLLGKKFKDSFGHAGSSILGGVVGMKKPQNHGVPYSLTEDFTSVYRMHS 402 Query: 376 LLPDTFQIHD--------------QKYNYQQFI--YNNSILLEHGITQFVESFTRQIAGR 419 LLPD I D Q+ + + I + G T+ + S Q +G Sbjct: 403 LLPDQLHILDIDDVPGTNKSLPLIQEISMRDLIGRKGEETMSHIGFTKLMVSMGHQASGA 462 Query: 420 VA----------------GGRNVPPAVQKVSQASIDQSRQMKYQSFNEYRKRFMLKPYES 463 + G+ P V ++ I + R+ +NE+R+ + P Sbjct: 463 LELMNYPMWLRDIVPHDPNGQARPDHVD-LAALEIYRDRERSVPRYNEFRRSMFMIPITK 521 Query: 464 FEELTGEKEMSAELEALY-GDIDAVELYPALLVEK 497 +E+LT ++E L+ +Y GD++ ++L L+ EK Sbjct: 522 WEDLTEDEEAIEVLDDVYDGDVEELDLLVGLMAEK 556 >6AZP-A nrPDB Length = 577 Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 49/191 (25%), Positives = 83/191 (43%), Gaps = 29/191 (15%) Query: 271 FAVGQEVFGLVPGLMMYATIWLREHNRVCDVLKQEHPEWGDEQLFQTSRLILIGETIKIV 330 F G +P L T+ LREHNR+ LK +P W E+L+Q +R I +G ++I+ Sbjct: 233 FLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKI-VGAMVQII 291 Query: 331 I-EDYVQHLSGYHFKLKFDPELL-FNKQFQYQNRIAAEF-NTLYHWHPLL-PDTFQIHDQ 386 DY+ + G K+ P +N RIA F N + H L+ P F++ D Sbjct: 292 TYRDYLPLVLGPTAMRKYLPTYRSYNDSV--DPRIANVFTNAFRYGHTLIQPFMFRL-DN 348 Query: 387 KYNYQQ----------FIYNNSILLEHGITQFVESFTRQIAGRVAGGRNVPPAVQKVSQA 436 +Y + F + ++LE GI + G P + + +Q Sbjct: 349 RYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILR-----------GLMATPAKLNRQNQI 397 Query: 437 SIDQSRQMKYQ 447 ++D+ R+ ++ Sbjct: 398 AVDEIRERLFE 408 >5MFA-A nrPDB Length = 697 Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 49/191 (25%), Positives = 83/191 (43%), Gaps = 29/191 (15%) Query: 271 FAVGQEVFGLVPGLMMYATIWLREHNRVCDVLKQEHPEWGDEQLFQTSRLILIGETIKIV 330 F G +P L T+ LREHNR+ LK +P W E+L+Q +R I +G ++I+ Sbjct: 351 FLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKI-VGAMVQII 409 Query: 331 I-EDYVQHLSGYHFKLKFDPELL-FNKQFQYQNRIAAEF-NTLYHWHPLL-PDTFQIHDQ 386 DY+ + G K+ P +N RIA F N + H L+ P F++ D Sbjct: 410 TYRDYLPLVLGPTAMRKYLPTYRSYNDSV--DPRIANVFTNAFRYGHTLIQPFMFRL-DN 466 Query: 387 KYNYQQ----------FIYNNSILLEHGITQFVESFTRQIAGRVAGGRNVPPAVQKVSQA 436 +Y + F + ++LE GI + G P + + +Q Sbjct: 467 RYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILR-----------GLMATPAKLNRQNQI 515 Query: 437 SIDQSRQMKYQ 447 ++D+ R+ ++ Sbjct: 516 AVDEIRERLFE 526 >1CXP-C nrPDB Length = 466 Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 49/191 (25%), Positives = 83/191 (43%), Gaps = 29/191 (15%) Query: 271 FAVGQEVFGLVPGLMMYATIWLREHNRVCDVLKQEHPEWGDEQLFQTSRLILIGETIKIV 330 F G +P L T+ LREHNR+ LK +P W E+L+Q +R I +G ++I+ Sbjct: 121 FLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKI-VGAMVQII 179 Query: 331 I-EDYVQHLSGYHFKLKFDPELL-FNKQFQYQNRIAAEF-NTLYHWHPLL-PDTFQIHDQ 386 DY+ + G K+ P +N RIA F N + H L+ P F++ D Sbjct: 180 TYRDYLPLVLGPTAMRKYLPTYRSYNDSV--DPRIANVFTNAFRYGHTLIQPFMFRL-DN 236 Query: 387 KYNYQQ----------FIYNNSILLEHGITQFVESFTRQIAGRVAGGRNVPPAVQKVSQA 436 +Y + F + ++LE GI + G P + + +Q Sbjct: 237 RYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILR-----------GLMATPAKLNRQNQI 285 Query: 437 SIDQSRQMKYQ 447 ++D+ R+ ++ Sbjct: 286 AVDEIRERLFE 296 >3ERH-A nrPDB Length = 595 Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 3/97 (3%) Query: 293 REHNRVCDVLKQEHPEWGDEQLFQTSRLILIGETIKIVIEDYVQHLSGYHFKLKFDPELL 352 REHNR+ LK+ +P W E+L+Q +R IL I DY+ + G + P Sbjct: 271 REHNRLARELKKLNPHWNGEKLYQEARKILGAFIQIITFRDYLPIVLGSEMQKWIPPYQG 330 Query: 353 FNKQFQYQNRIAAEFNTLYHW-HPLLPDTFQIHDQKY 388 +N RI+ F + + H +P T D+ Y Sbjct: 331 YNNSV--DPRISNVFTFAFRFGHMEVPSTVSRLDENY 365 >2VJ2-A nrPDB Length = 169 Score = 39.3 bits (90), Expect = 0.004, Method: Composition-based stats. Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%) Query: 19 NPCCSH-PCQNRGVCMSVGFDQYKCDCTRTGFYGENC 54 N C +H PC N G C + G D+Y+C C G+ G NC Sbjct: 132 NYCGTHQPCLNGGTCSNTGPDKYQCSCPE-GYSGPNC 167 >5BO1-A nrPDB Length = 150 Score = 39.3 bits (90), Expect = 0.005, Method: Composition-based stats. Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%) Query: 19 NPCCSH-PCQNRGVCMSVGFDQYKCDCTRTGFYGENC 54 N C +H PC N G C + G D+Y+C C G+ G NC Sbjct: 113 NYCGTHQPCLNGGTCSNTGPDKYQCSCPE-GYSGPNC 148 >1WHE-A nrPDB Length = 86 Score = 38.9 bits (89), Expect = 0.006, Method: Composition-based stats. Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 5/45 (11%) Query: 18 ANPCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENCSTPEFLTR 62 + C HPC N+G C G Y C C GF G+NC EF TR Sbjct: 47 GDQCEGHPCLNQGHCKD-GIGDYTCTCAE-GFEGKNC---EFSTR 86 >1IQG-L nrPDB Length = 96 Score = 38.9 bits (89), Expect = 0.007, Method: Composition-based stats. Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 5/45 (11%) Query: 18 ANPCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENCSTPEFLTR 62 + C + PCQN+G C G +Y C C GF G+NC E TR Sbjct: 4 GDQCETSPCQNQGKCKD-GLGEYTCTCLE-GFEGKNC---ELFTR 43 >5FMA-A nrPDB Length = 154 Score = 38.9 bits (89), Expect = 0.007, Method: Composition-based stats. Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%) Query: 20 PCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENC 54 PC PCQN G C G ++C C GF G+NC Sbjct: 81 PCSPSPCQNGGTCRPTGDVTHECACL-PGFTGQNC 114 Score = 30.8 bits (68), Expect = 1.8, Method: Composition-based stats. Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%) Query: 19 NPCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENC 54 +PC S+PC N G C+ Y C C + F+G C Sbjct: 2 DPCASNPCANGGQCLPFE-ASYICHCPPS-FHGPTC 35 >1NFU-B nrPDB Length = 195 Score = 38.5 bits (88), Expect = 0.010, Method: Composition-based stats. Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 5/45 (11%) Query: 18 ANPCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENCSTPEFLTR 62 + C + PCQN+G C G +Y C C GF G+NC E TR Sbjct: 42 GDQCETSPCQNQGKCKD-GLGEYTCTCLE-GFEGKNC---ELFTR 81 >2H9E-L nrPDB Length = 149 Score = 38.1 bits (87), Expect = 0.010, Method: Composition-based stats. Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 5/45 (11%) Query: 18 ANPCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENCSTPEFLTR 62 + C + PCQN+G C G +Y C C GF G+NC E TR Sbjct: 2 GDQCETSPCQNQGKCKD-GLGEYTCTCLE-GFEGKNC---ELFTR 41 >4ZH8-B nrPDB Length = 133 Score = 37.7 bits (86), Expect = 0.013, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 5/46 (10%) Query: 18 ANPCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENCSTPEFLTRI 63 + C + PCQN+G C G +Y C C GF G+NC E T++ Sbjct: 42 GDQCETSPCQNQGKCKD-GLGEYTCTCLE-GFEGKNC---ELFTKL 82 >5MW7-A nrPDB Length = 332 Score = 35.0 bits (79), Expect = 0.084, Method: Compositional matrix adjust. Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%) Query: 24 HPCQNRGVCMSVGFDQYKCDCTRTGFYGENCSTPE 58 HPC N G C++ DQY+C C G+ G NC E Sbjct: 289 HPCTNGGTCINAEPDQYRCTCP-DGYSGRNCEKAE 322 >5MWB-A nrPDB Length = 156 Score = 35.0 bits (79), Expect = 0.092, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 5/68 (7%) Query: 19 NPCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENCSTPEFLTRIKLFLKPTPNTVHYIL 78 N C S+PC N G C+ ++++C C GF G C + L P ++H+IL Sbjct: 83 NECQSNPCVNNGQCVD-KVNRFQCLCP-PGFTGPVCQIDGSGLEV---LFQGPGSLHHIL 137 Query: 79 THFKGFWN 86 K WN Sbjct: 138 DAQKMVWN 145 >4D90-A nrPDB Length = 143 Score = 33.9 bits (76), Expect = 0.19, Method: Composition-based stats. Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%) Query: 16 HTANPCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENC 54 H N C PC+N G+C + Y C+C F G NC Sbjct: 95 HNINECEVEPCKNGGICTDL-VANYSCECPGE-FMGRNC 131 Score = 32.3 bits (72), Expect = 0.61, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 7/44 (15%) Query: 17 TANPCCSHPCQNRGVC------MSVGFDQYKCDCTRTGFYGENC 54 +A PC +PC N G C F Y C C R GF G +C Sbjct: 51 SAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPR-GFNGIHC 93 Score = 31.2 bits (69), Expect = 1.4, Method: Composition-based stats. Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%) Query: 21 CCSHPCQNRGVCMSVGFD-QYKCDCTRTGFYGENCST 56 C +PC+N G+C+ D + C+C GF NCS+ Sbjct: 3 CDPNPCENGGICLPGLADGSFSCECP-DGFTDPNCSS 38 >4BXW-A nrPDB Length = 423 Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust. Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%) Query: 18 ANPCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENC 54 + C S+PC RG+C G Y C C +G+ G+NC Sbjct: 47 GDQCSSNPCHYRGICKD-GIGSYTCTCL-SGYEGKNC 81 >4CUD-A nrPDB Length = 135 Score = 33.1 bits (74), Expect = 0.38, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 18/68 (26%) Query: 19 NPCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENCSTPEFLTRIKLFLKPTPNTVHYIL 78 + C S PC + G C+ ++++C+C TGF G C +H+IL Sbjct: 84 DECASSPCLHNGRCLD-KINEFQCECP-TGFTGHLCQV----------------DLHHIL 125 Query: 79 THFKGFWN 86 K WN Sbjct: 126 DAQKMVWN 133 Score = 31.6 bits (70), Expect = 1.1, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%) Query: 19 NPCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENC 54 N C S+PCQN C+ +++C C G+ G +C Sbjct: 46 NECVSNPCQNDATCLD-QIGEFQCICM-PGYEGVHC 79 >1DAN-L nrPDB Length = 152 Score = 32.0 bits (71), Expect = 0.75, Method: Composition-based stats. Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 2/39 (5%) Query: 18 ANPCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENCST 56 + C S PCQN G C Y C C F G NC T Sbjct: 47 GDQCASSPCQNGGSCKD-QLQSYICFCL-PAFEGRNCET 83 >1QFK-L nrPDB Length = 104 Score = 32.0 bits (71), Expect = 0.80, Method: Composition-based stats. Identities = 16/36 (44%), Positives = 16/36 (44%), Gaps = 2/36 (5%) Query: 21 CCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENCST 56 C S PCQN G C Y C C F G NC T Sbjct: 2 CASSPCQNGGSCKD-QLQSYICFCL-PAFEGRNCET 35 >1TOZ-A nrPDB Length = 116 Score = 31.6 bits (70), Expect = 0.98, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 2/36 (5%) Query: 19 NPCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENC 54 + C S PC + G C+ ++++C+C TGF G C Sbjct: 82 DECASSPCLHNGRCLD-KINEFQCECP-TGFTGHLC 115 Score = 31.2 bits (69), Expect = 1.2, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%) Query: 19 NPCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENC 54 N C S+PCQN C+ +++C C G+ G +C Sbjct: 44 NECVSNPCQNDATCLD-QIGEFQCICM-PGYEGVHC 77 >4CC0-A nrPDB Length = 312 Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust. Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Query: 24 HPCQNRGVCMSVGFDQYKCDCTRTGFYGENC 54 PC N G C + G D+Y+C C G+ G NC Sbjct: 273 QPCLNGGTCSNTGPDKYQCSCPE-GYSGPNC 302 >3VTI-A nrPDB Length = 761 Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust. Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 11/75 (14%) Query: 378 PDTFQIHDQKYNYQQFIYNNS--ILLE-HGITQFVESFTRQIAGRVAGGRNVPPAVQKVS 434 P F I QKYN + +YNNS + +E G + +E+F R+I + PP++ + Sbjct: 27 PFVFNIA-QKYNLKGIVYNNSSGLYIEVEGEEKDIEAFIREI-------KENPPSLSVID 78 Query: 435 QASIDQSRQMKYQSF 449 + + + +Y+ F Sbjct: 79 EIQVREVEVKEYKDF 93 >4XL1-A nrPDB Length = 118 Score = 30.0 bits (66), Expect = 2.9, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 2/36 (5%) Query: 19 NPCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENC 54 N C S+PCQN C+ +++C C G+ G C Sbjct: 44 NECISNPCQNDATCLD-QIGEFQCICM-PGYEGVYC 77 >2DPN-A nrPDB Length = 495 Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust. Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 2/35 (5%) Query: 491 PALLVEKPRP-DAIFGETMVE-VGAPFSLKGLMGN 523 PA L+ + RP D FGET+ E +GAP ++G++G+ Sbjct: 208 PAALLPEVRPSDGDFGETLPELLGAPVPIRGVLGD 242 >1KXL-A nrPDB Length = 199 Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust. Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 9/114 (7%) Query: 161 NEIVEKLLLRRKFIPDPQGSNMMFAFFAQHFTHQFFKTDHKRGPAFTNG---LGHGVDLN 217 N+IV+ L R I + F A + +QF D K F NG L +G D N Sbjct: 55 NDIVQNYLYDRYLIDYENKLELNEGFKAIMYKNQFETFDSKLRKIFNNGLRDLQNGRDEN 114 Query: 218 -HIYGETLARQRKLRLFKDGKMKYQIIDGEMYPPTVKDTQAEMIYPPQVPEHLR 270 YG K++++ +GK+ + + E P +Q I P EHLR Sbjct: 115 LSQYGIVCKMNIKVKMY-NGKLNAIVRECEPVP----HSQISSIASPSQCEHLR 163 >5L81-A nrPDB Length = 150 Score = 28.9 bits (63), Expect = 6.5, Method: Compositional matrix adjust. Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 5/67 (7%) Query: 121 GYKS-WEAFSN--LSYYTRALPPVPDDCPTPLGVKGKKQLPDSNEIVEKLLLRRKFIPDP 177 GY+ W F + LSYY ++ P D L +KG + +PD N +K ++ +P P Sbjct: 39 GYRQYWVVFKDTTLSYY-KSQDEAPGDPTQQLNLKGCEVVPDVNVSGQKFCIKL-LVPSP 96 Query: 178 QGSNMMF 184 +G + ++ Sbjct: 97 EGMSEIY 103 >1T7V-A nrPDB Length = 278 Score = 28.9 bits (63), Expect = 6.7, Method: Compositional matrix adjust. Identities = 31/153 (20%), Positives = 64/153 (41%), Gaps = 11/153 (7%) Query: 308 EWGDEQLFQTSRLILIGETIKIVIEDYVQHLSGYHFKLKFDPELLFNK------QFQYQN 361 +W + Q +R + ET+K ++E Y + + +F E+ N+ ++ Y Sbjct: 62 DWKQDSQLQKAREDIFMETLKDIVEYYKDSTGSHVLQGRFGCEIENNRSSGAFWKYYYDG 121 Query: 362 RIAAEFNT-LYHWHPLLPDTFQIHDQKYNYQQ-FIYNNSILLEHGITQFVESFTRQIAGR 419 + EFN + W P P QI QK+ + ++ LE + + + Sbjct: 122 KDYIEFNKEIPAWVPFDP-AAQITKQKWEAEPVYVQRAKAYLEEECPATLRKYLKYSKNI 180 Query: 420 VAGGRNVPPAVQKVSQASIDQSRQMKYQSFNEY 452 + R PP+V S + + +++K +++ Y Sbjct: 181 L--DRQDPPSVVVTSHQAPGEKKKLKCLAYDFY 211 >4XBM-A nrPDB Length = 531 Score = 28.9 bits (63), Expect = 7.6, Method: Compositional matrix adjust. Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Query: 21 CCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENCSTP 57 C S PC N G C G + + C C G+ G NCS P Sbjct: 427 CASSPCANGGTCRD-GVNDFSCTCP-PGYTGRNCSAP 461 >3O84-A nrPDB Length = 544 Score = 28.5 bits (62), Expect = 8.5, Method: Compositional matrix adjust. Identities = 27/72 (37%), Positives = 34/72 (47%), Gaps = 19/72 (26%) Query: 264 QVPEHLRFAVGQEVFGLVPGLMMYATIWLREHNRVCDVLKQEHPEWGDEQLFQT-SRLIL 322 QVPE L + Q+VFG+ GL+ Y R+ D DEQ+F T R I Sbjct: 326 QVPEVLNCKL-QQVFGMAEGLVNY--------TRLDD---------SDEQIFTTQGRPIS 367 Query: 323 IGETIKIVIEDY 334 + IKIV E Y Sbjct: 368 SDDEIKIVDEQY 379 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3QH0-A nrPDB 1025 0.0 5F1A-A nrPDB 944 0.0 5WBE-A nrPDB 892 0.0 4KVK-A nrPDB 382 e-106 4HHR-A nrPDB 361 e-100 6ERC-A nrPDB 337 1e-92 5MFA-A nrPDB 190 1e-48 1CXP-C nrPDB 189 2e-48 6AZP-A nrPDB 189 3e-48 3ERH-A nrPDB 172 4e-43 Sequences not found previously or not previously below threshold: 2VJ2-A nrPDB 46 4e-05 4CC0-A nrPDB 46 4e-05 5BO1-A nrPDB 46 4e-05 5MWB-A nrPDB 45 8e-05 5MW7-A nrPDB 43 4e-04 1IQG-L nrPDB 41 0.001 1NFU-B nrPDB 41 0.001 4ZH8-B nrPDB 41 0.001 2H9E-L nrPDB 41 0.002 4BXW-A nrPDB 41 0.002 4XBM-A nrPDB 40 0.002 5FMA-A nrPDB 40 0.003 1WHE-A nrPDB 39 0.007 5UK5-A nrPDB 38 0.010 4CUD-A nrPDB 38 0.013 1TOZ-A nrPDB 36 0.050 5MVX-A nrPDB 36 0.054 4XL1-A nrPDB 35 0.061 3H5C-B nrPDB 35 0.062 4D90-A nrPDB 35 0.11 1QFK-L nrPDB 33 0.44 1DAN-L nrPDB 33 0.44 5MS9-A nrPDB 32 0.57 3DWC-A nrPDB 32 0.69 2ZUE-A nrPDB 31 1.3 4R16-A nrPDB 31 1.7 1FCV-A nrPDB 30 2.1 5ZWM-O nrPDB 30 4.1 4V6W-CL nrPDB 29 9.0 >3QH0-A nrPDB Length = 610 Score = 1025 bits (2649), Expect = 0.0, Method: Composition-based stats. Identities = 523/610 (85%), Positives = 562/610 (92%), Gaps = 6/610 (0%) Query: 1 MLARALLLCAVLALSHTAN------PCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENC 54 ML RA+LLCA L LS AN PCCS+PCQNRG CMS GFDQYKCDCTRTGFYGENC Sbjct: 1 MLFRAVLLCAALGLSQAANHHHHHHPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENC 60 Query: 55 STPEFLTRIKLFLKPTPNTVHYILTHFKGFWNVVNNIPFLRNAIMSYVLTSRSHLIDSPP 114 +TPEFLTRIKL LKPTPNTVHYILTHFKG WN+VNNIPFLR+ IM YVLTSRS+LIDSPP Sbjct: 61 TTPEFLTRIKLLLKPTPNTVHYILTHFKGVWNIVNNIPFLRSLIMKYVLTSRSYLIDSPP 120 Query: 115 TYNADYGYKSWEAFSNLSYYTRALPPVPDDCPTPLGVKGKKQLPDSNEIVEKLLLRRKFI 174 TYN YGYKSWEAFSNLSYYTRALPPV DDCPTP+GVKG K+LPDS E++EK+LLRR+FI Sbjct: 121 TYNVHYGYKSWEAFSNLSYYTRALPPVADDCPTPMGVKGNKELPDSKEVLEKVLLRREFI 180 Query: 175 PDPQGSNMMFAFFAQHFTHQFFKTDHKRGPAFTNGLGHGVDLNHIYGETLARQRKLRLFK 234 PDPQGSNMMFAFFAQHFTHQFFKTDHKRGP FT GLGHGVDLNHIYGETL RQ KLRLFK Sbjct: 181 PDPQGSNMMFAFFAQHFTHQFFKTDHKRGPGFTRGLGHGVDLNHIYGETLDRQHKLRLFK 240 Query: 235 DGKMKYQIIDGEMYPPTVKDTQAEMIYPPQVPEHLRFAVGQEVFGLVPGLMMYATIWLRE 294 DGK+KYQ+I GE+YPPTVKDTQ EMIYPP +PE+L+FAVGQEVFGLVPGLMMYATIWLRE Sbjct: 241 DGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQFAVGQEVFGLVPGLMMYATIWLRE 300 Query: 295 HNRVCDVLKQEHPEWGDEQLFQTSRLILIGETIKIVIEDYVQHLSGYHFKLKFDPELLFN 354 HNRVCD+LKQEHPEWGDEQLFQTSRLILIGETIKIVIEDYVQHLSGYHFKLKFDPELLFN Sbjct: 301 HNRVCDILKQEHPEWGDEQLFQTSRLILIGETIKIVIEDYVQHLSGYHFKLKFDPELLFN 360 Query: 355 KQFQYQNRIAAEFNTLYHWHPLLPDTFQIHDQKYNYQQFIYNNSILLEHGITQFVESFTR 414 +QFQYQNRIA+EFNTLYHWHPLLPDTF I DQ+Y+++QF+YNNSILLEHG+TQFVESFTR Sbjct: 361 QQFQYQNRIASEFNTLYHWHPLLPDTFNIEDQEYSFKQFLYNNSILLEHGLTQFVESFTR 420 Query: 415 QIAGRVAGGRNVPPAVQKVSQASIDQSRQMKYQSFNEYRKRFMLKPYESFEELTGEKEMS 474 QIAGRVAGGRNVP AVQ V++ASIDQSR+MKYQS NEYRKRF LKPY SFEELTGEKEM+ Sbjct: 421 QIAGRVAGGRNVPIAVQAVAKASIDQSREMKYQSLNEYRKRFSLKPYTSFEELTGEKEMA 480 Query: 475 AELEALYGDIDAVELYPALLVEKPRPDAIFGETMVEVGAPFSLKGLMGNVICSPAYWKPS 534 AEL+ALY DID +ELYPALLVEKPRPDAIFGETMVE+GAPFSLKGLMGN ICSP YWKPS Sbjct: 481 AELKALYSDIDVMELYPALLVEKPRPDAIFGETMVELGAPFSLKGLMGNPICSPQYWKPS 540 Query: 535 TFGGEVGFQIINTASIQSLICNNVKGCPFTSFSVPDPELIKTVTINASSSRSGLDDINPT 594 TFGGEVGF+IINTASIQSLICNNVKGCPFTSF+V DP+ KT TI AS+S S LDDINPT Sbjct: 541 TFGGEVGFKIINTASIQSLICNNVKGCPFTSFNVQDPQPTKTATIAASASHSRLDDINPT 600 Query: 595 VLLKERSTEL 604 VL+K RSTEL Sbjct: 601 VLIKRRSTEL 610 >5F1A-A nrPDB Length = 553 Score = 944 bits (2439), Expect = 0.0, Method: Composition-based stats. Identities = 552/552 (100%), Positives = 552/552 (100%) Query: 19 NPCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENCSTPEFLTRIKLFLKPTPNTVHYIL 78 NPCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENCSTPEFLTRIKLFLKPTPNTVHYIL Sbjct: 2 NPCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENCSTPEFLTRIKLFLKPTPNTVHYIL 61 Query: 79 THFKGFWNVVNNIPFLRNAIMSYVLTSRSHLIDSPPTYNADYGYKSWEAFSNLSYYTRAL 138 THFKGFWNVVNNIPFLRNAIMSYVLTSRSHLIDSPPTYNADYGYKSWEAFSNLSYYTRAL Sbjct: 62 THFKGFWNVVNNIPFLRNAIMSYVLTSRSHLIDSPPTYNADYGYKSWEAFSNLSYYTRAL 121 Query: 139 PPVPDDCPTPLGVKGKKQLPDSNEIVEKLLLRRKFIPDPQGSNMMFAFFAQHFTHQFFKT 198 PPVPDDCPTPLGVKGKKQLPDSNEIVEKLLLRRKFIPDPQGSNMMFAFFAQHFTHQFFKT Sbjct: 122 PPVPDDCPTPLGVKGKKQLPDSNEIVEKLLLRRKFIPDPQGSNMMFAFFAQHFTHQFFKT 181 Query: 199 DHKRGPAFTNGLGHGVDLNHIYGETLARQRKLRLFKDGKMKYQIIDGEMYPPTVKDTQAE 258 DHKRGPAFTNGLGHGVDLNHIYGETLARQRKLRLFKDGKMKYQIIDGEMYPPTVKDTQAE Sbjct: 182 DHKRGPAFTNGLGHGVDLNHIYGETLARQRKLRLFKDGKMKYQIIDGEMYPPTVKDTQAE 241 Query: 259 MIYPPQVPEHLRFAVGQEVFGLVPGLMMYATIWLREHNRVCDVLKQEHPEWGDEQLFQTS 318 MIYPPQVPEHLRFAVGQEVFGLVPGLMMYATIWLREHNRVCDVLKQEHPEWGDEQLFQTS Sbjct: 242 MIYPPQVPEHLRFAVGQEVFGLVPGLMMYATIWLREHNRVCDVLKQEHPEWGDEQLFQTS 301 Query: 319 RLILIGETIKIVIEDYVQHLSGYHFKLKFDPELLFNKQFQYQNRIAAEFNTLYHWHPLLP 378 RLILIGETIKIVIEDYVQHLSGYHFKLKFDPELLFNKQFQYQNRIAAEFNTLYHWHPLLP Sbjct: 302 RLILIGETIKIVIEDYVQHLSGYHFKLKFDPELLFNKQFQYQNRIAAEFNTLYHWHPLLP 361 Query: 379 DTFQIHDQKYNYQQFIYNNSILLEHGITQFVESFTRQIAGRVAGGRNVPPAVQKVSQASI 438 DTFQIHDQKYNYQQFIYNNSILLEHGITQFVESFTRQIAGRVAGGRNVPPAVQKVSQASI Sbjct: 362 DTFQIHDQKYNYQQFIYNNSILLEHGITQFVESFTRQIAGRVAGGRNVPPAVQKVSQASI 421 Query: 439 DQSRQMKYQSFNEYRKRFMLKPYESFEELTGEKEMSAELEALYGDIDAVELYPALLVEKP 498 DQSRQMKYQSFNEYRKRFMLKPYESFEELTGEKEMSAELEALYGDIDAVELYPALLVEKP Sbjct: 422 DQSRQMKYQSFNEYRKRFMLKPYESFEELTGEKEMSAELEALYGDIDAVELYPALLVEKP 481 Query: 499 RPDAIFGETMVEVGAPFSLKGLMGNVICSPAYWKPSTFGGEVGFQIINTASIQSLICNNV 558 RPDAIFGETMVEVGAPFSLKGLMGNVICSPAYWKPSTFGGEVGFQIINTASIQSLICNNV Sbjct: 482 RPDAIFGETMVEVGAPFSLKGLMGNVICSPAYWKPSTFGGEVGFQIINTASIQSLICNNV 541 Query: 559 KGCPFTSFSVPD 570 KGCPFTSFSVPD Sbjct: 542 KGCPFTSFSVPD 553 >5WBE-A nrPDB Length = 600 Score = 892 bits (2306), Expect = 0.0, Method: Composition-based stats. Identities = 352/555 (63%), Positives = 444/555 (80%), Gaps = 1/555 (0%) Query: 18 ANPCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENCSTPEFLTRIKLFLKPTPNTVHYI 77 NPCC +PCQ++G+C+ G D+Y+CDCTRTG+ G NC+ PE T ++ L+P+P+ +H++ Sbjct: 33 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTIPEIWTWLRTTLRPSPSFIHFL 92 Query: 78 LTHFKGFWNVVNNIPFLRNAIMSYVLTSRSHLIDSPPTYNADYGYKSWEAFSNLSYYTRA 137 LTH + W+ VN F+R+ +M VLT RS+LI SPPTYN + Y SWE+FSN+SYYTR Sbjct: 93 LTHGRWLWDFVNAT-FIRDTLMRLVLTVRSNLIPSPPTYNIAHDYISWESFSNVSYYTRI 151 Query: 138 LPPVPDDCPTPLGVKGKKQLPDSNEIVEKLLLRRKFIPDPQGSNMMFAFFAQHFTHQFFK 197 LP VP DCPTP+ KGKKQLPD+ + + LLRRKFIPDPQ +N+MFAFFAQHFTHQFFK Sbjct: 152 LPSVPRDCPTPMDTKGKKQLPDAEFLSRRFLLRRKFIPDPQSTNLMFAFFAQHFTHQFFK 211 Query: 198 TDHKRGPAFTNGLGHGVDLNHIYGETLARQRKLRLFKDGKMKYQIIDGEMYPPTVKDTQA 257 T K GP FT LGHGVDL HIYG+ L RQ +LRLFKDGK+KYQ+++GE+YPP+V++ Sbjct: 212 TSGKMGPGFTKALGHGVDLGHIYGDNLERQYQLRLFKDGKLKYQMLNGEVYPPSVEEAPV 271 Query: 258 EMIYPPQVPEHLRFAVGQEVFGLVPGLMMYATIWLREHNRVCDVLKQEHPEWGDEQLFQT 317 M YP +P + AVGQEVFGL+PGLM+YATIWLREHNRVCD+LK EHP WGDEQLFQT Sbjct: 272 LMHYPRGIPPQSQMAVGQEVFGLLPGLMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQT 331 Query: 318 SRLILIGETIKIVIEDYVQHLSGYHFKLKFDPELLFNKQFQYQNRIAAEFNTLYHWHPLL 377 +RLILIGETIKIVIE+YVQ LSGY +LKFDPELLF QFQY+NRIA EFN LYHWHPL+ Sbjct: 332 ARLILIGETIKIVIEEYVQQLSGYFLQLKFDPELLFGAQFQYRNRIAMEFNQLYHWHPLM 391 Query: 378 PDTFQIHDQKYNYQQFIYNNSILLEHGITQFVESFTRQIAGRVAGGRNVPPAVQKVSQAS 437 PD+F++ Q Y+Y+QF++N S+L+++G+ V++F+RQ AGR+ GGRN+ + V+ Sbjct: 392 PDSFRVGPQDYSYEQFLFNTSMLVDYGVEALVDAFSRQPAGRIGGGRNIDHHILHVAVDV 451 Query: 438 IDQSRQMKYQSFNEYRKRFMLKPYESFEELTGEKEMSAELEALYGDIDAVELYPALLVEK 497 I +SR ++ Q FNEYRKRF +KPY SF+ELTGEKEM+AELE LYGDIDA+E YP LL+EK Sbjct: 452 IKESRVLRLQPFNEYRKRFGMKPYTSFQELTGEKEMAAELEELYGDIDALEFYPGLLLEK 511 Query: 498 PRPDAIFGETMVEVGAPFSLKGLMGNVICSPAYWKPSTFGGEVGFQIINTASIQSLICNN 557 P++IFGE+M+E+GAPFSLKGL+GN ICSP YWK STFGGEVGF ++ TA+++ L+C N Sbjct: 512 CHPNSIFGESMIEMGAPFSLKGLLGNPICSPEYWKASTFGGEVGFNLVKTATLKKLVCLN 571 Query: 558 VKGCPFTSFSVPDPE 572 K CP+ SF VPDP Sbjct: 572 TKTCPYVSFHVPDPR 586 >4KVK-A nrPDB Length = 621 Score = 382 bits (980), Expect = e-106, Method: Composition-based stats. Identities = 98/485 (20%), Positives = 174/485 (35%), Gaps = 130/485 (26%) Query: 126 EAFSNLSYYTRALPPVPDDCPTPLGVKGKKQLPDSNEIVEKLLLRRKFIPDPQGSNMMFA 185 EA S +++ R + PV + + PD + KLL RR++ + N++ A Sbjct: 101 EAGSQNTFFGRNMEPVDQ--------QDELMSPDPFVVATKLLARREYKDTGKQFNILAA 152 Query: 186 FFAQHFTHQFFKTDH---------------------------KRGPAFTNGLGH------ 212 + Q H + K P ++G+ Sbjct: 153 AWIQFMVHDWMDHMEDTGQIGITAPKEVANECPLKSFKFHPTKELPTNSDGIKIGHYNIR 212 Query: 213 --GVDLNHIYGETLARQRKLRLFKDGKMKYQIIDGEMYPPTVKDTQAEMIYPPQVPEHLR 270 D + +YG R KLR + DGK+ + D + V Sbjct: 213 TAWWDGSAVYGNNEERAEKLRTYVDGKL------------VIGDDGLLLHKENGV----- 255 Query: 271 FAVGQEVFGLVPGLMMYATIWLREHNRVCDVLKQEHPEWGDEQLFQTSRLILIGETIKIV 330 A+ ++ G+ + ++++EHN VCD +K+EHP DE+L++ ++L+ K+ Sbjct: 256 -ALSGDIRNSWAGVSILQALFVKEHNAVCDAIKEEHPNLSDEELYRYAKLVTSAVIAKVH 314 Query: 331 IEDY-----------------------------VQHLSGYHFKLKFDPELLFNKQFQYQN 361 D+ H+ G + N Y Sbjct: 315 TIDWTVELLKTKTMRAAMRANWYGLLGKKIKDTFGHIGGPILGGLVGLKKPNNHGVPY-- 372 Query: 362 RIAAEFNTLYHWHPLLPDTFQIHDQKYNYQQFIYNNS--ILLEHGITQFVE--------- 410 + EF ++Y H L+P T ++ D Q NNS L + I + + Sbjct: 373 SLTEEFTSVYRMHSLIPSTLKLRDPT---GQPDANNSPPCLEDIDIGEMIGLKGEEQLSK 429 Query: 411 -SFTRQI--AGRVAGG-----------RNVPPAVQK---------VSQASIDQSRQMKYQ 447 F +Q G A G RN+ P ++ + + R+ Sbjct: 430 IGFEKQALSMGYQACGALELWNYPSFFRNLIPQNLDGTNRSDRIDLAALEVYRDRERSVP 489 Query: 448 SFNEYRKRFMLKPYESFEELTGEKEMSAELEALYG-DIDAVELYPALLVEKPRPDAIFGE 506 +NE+R+R L P +S+E+LT +K+ + A+YG D++ ++L L+ EK E Sbjct: 490 RYNEFRRRLFLIPIKSWEDLTSDKDAIETIRAIYGDDVEKLDLLVGLMAEKKIKGFAISE 549 Query: 507 TMVEV 511 T + Sbjct: 550 TAFNI 554 >4HHR-A nrPDB Length = 652 Score = 361 bits (927), Expect = e-100, Method: Composition-based stats. Identities = 99/481 (20%), Positives = 163/481 (33%), Gaps = 125/481 (25%) Query: 128 FSNLSYYTRALPPVPDDCPTPLGVKGKKQLPDSNEIVEKLLLRRKFIPDPQGSNMMFAFF 187 S S++ R PPV K K + PD + KLL R+KFI + NM+ A + Sbjct: 118 GSQNSFFGRNCPPVDQ--------KSKLRRPDPMVVATKLLGRKKFIDTGKQFNMIAASW 169 Query: 188 AQHFTHQF-----------------------------FKTDHKRGPAFTNGLGH------ 212 Q H + KT F G Sbjct: 170 IQFMIHDWIDHLEDTHQIELVAPKEVASKCPLSSFRFLKTKEVPTGFFEIKTGSQNIRTP 229 Query: 213 GVDLNHIYGETLARQRKLRLFKDGKMKYQIIDGEMYPPTVKDTQAEMIYPPQVPEHLRFA 272 D + IYG ++R +KDGK+K G + + D A Sbjct: 230 WWDSSVIYGSNSKTLDRVRTYKDGKLKISEETGLL----LHDEDGL-------------A 272 Query: 273 VGQEVFGLVPGLMMYATIWLREHNRVCDVLKQEHPEWGDEQLFQTSRLILIGETIKIVIE 332 + ++ G+ ++++EHN VCD LK E + DE L++ +RL+ KI Sbjct: 273 ISGDIRNSWAGVSALQALFIKEHNAVCDALKDEDDDLEDEDLYRYARLVTSAVVAKIHTI 332 Query: 333 DY-----------------------------VQHLSGYHFKLKFDPELLFNKQFQYQNRI 363 D+ H + N Y + Sbjct: 333 DWTVQLLKTDTLLAGMRANWYGLLGKKFKDSFGHAGSSILGGVVGMKKPQNHGVPY--SL 390 Query: 364 AAEFNTLYHWHPLLPDTFQIHD--------------QKYNYQQFI--YNNSILLEHGITQ 407 +F ++Y H LLPD I D Q+ + + I + G T+ Sbjct: 391 TEDFTSVYRMHSLLPDQLHILDIDDVPGTNKSLPLIQEISMRDLIGRKGEETMSHIGFTK 450 Query: 408 FVESFTRQIAGRVA----------------GGRNVPPAVQKVSQASIDQSRQMKYQSFNE 451 + S Q +G + G+ P V ++ I + R+ +NE Sbjct: 451 LMVSMGHQASGALELMNYPMWLRDIVPHDPNGQARPDHVD-LAALEIYRDRERSVPRYNE 509 Query: 452 YRKRFMLKPYESFEELTGEKEMSAELEALY-GDIDAVELYPALLVEKPRPDAIFGETMVE 510 +R+ + P +E+LT ++E L+ +Y GD++ ++L L+ EK ET Sbjct: 510 FRRSMFMIPITKWEDLTEDEEAIEVLDDVYDGDVEELDLLVGLMAEKKIKGFAISETAFY 569 Query: 511 V 511 + Sbjct: 570 I 570 >6ERC-A nrPDB Length = 511 Score = 337 bits (863), Expect = 1e-92, Method: Composition-based stats. Identities = 75/323 (23%), Positives = 135/323 (41%), Gaps = 32/323 (9%) Query: 208 NGLGHGVDLNHIYGETLARQRKLRLFKDGKMKYQIID-GEMYPPTV----KDTQAEMIYP 262 N LG +D N +YG + + LR G+MK + D G++ P V D A + Sbjct: 144 NSLGSYIDGNVLYGNSEEICKNLRSLSGGEMKMTVTDVGDLPPKNVPGVPMDNDANLF-- 201 Query: 263 PQVPEHLRFAVGQEVFGLVPGLMMYATIWLREHNRVCDVLKQEHPEWGDEQLFQTSRLIL 322 P ++VG+ PGL+ T+ LR+HNR+ + HPEW DE++FQ SR + Sbjct: 202 ---PIDQLYSVGERRGNENPGLLSIHTLLLRDHNRLARKFARLHPEWDDERVFQQSRSCI 258 Query: 323 IGETIKIVIEDYVQ-------HLSGYHFKLKFDPELLFNK-QFQYQNRIAAEFNTLYHWH 374 I + KI ++Y+ +GY + F F++ + F Y + Sbjct: 259 IEQIQKITYDEYLPTTLGSFPSYTGYDANVNAQVSNEFTTTAFRFGHSEVGPFMEYYSEN 318 Query: 375 -------PLLPDTFQIHDQKYNYQQFIYNNSILLEHGITQFVESFTRQ-IAGRVAGGRNV 426 P+ F H + I I E I ++ S R + G+ G Sbjct: 319 GTRLQPLPIKFSYFNPHALNRGVEPLIRGLIINEEENIDIYMISDLRNFLFGKPGQGG-- 376 Query: 427 PPAVQKVSQASIDQSRQMKYQSFNEYRKRFMLKPYESFEELTGEKEMSAELEALYGDIDA 486 ++ ++ ++R +N R++ L+P +++ ++T + ++ L+ Y +D Sbjct: 377 ----LDLASRNLQRNRDHGIPPYNSLRRQLGLRPVQTWSDITSDPQIQNRLKNAYKSVDD 432 Query: 487 VELYPALLVEKPRPDAIFGETMV 509 ++ Y L E + G+T Sbjct: 433 IDSYVGGLAEDHMEGSCVGQTFY 455 >5MFA-A nrPDB Length = 697 Score = 190 bits (483), Expect = 1e-48, Method: Composition-based stats. Identities = 66/324 (20%), Positives = 116/324 (35%), Gaps = 40/324 (12%) Query: 208 NGLGHGVDLNHIYGETLARQRKLRLFKD--GKMKYQII-----DGEMYPPTVKDTQAEMI 260 N L VD + +YG R LR + G + + + D + Sbjct: 283 NALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLT 342 Query: 261 YPPQVPEHLRFAVGQEVFGLVPGLMMYATIWLREHNRVCDVLKQEHPEWGDEQLFQTSRL 320 F G +P L T+ LREHNR+ LK +P W E+L+Q +R Sbjct: 343 NRSARIP--CFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARK 400 Query: 321 ILIGETIKIVIEDYVQHLSGYHFKLKFDPELL-FNKQFQYQNRIAAEF-NTLYHWHPLL- 377 I+ I DY+ + G K+ P +N RIA F N + H L+ Sbjct: 401 IVGAMVQIITYRDYLPLVLGPTAMRKYLPTYRSYNDSV--DPRIANVFTNAFRYGHTLIQ 458 Query: 378 PDTFQIHDQKYNYQQ----------FIYNNSILLEHGITQFVESFTRQIAGRVAGGRNVP 427 P F++ D +Y + F + ++LE GI + A + Sbjct: 459 PFMFRL-DNRYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAV 517 Query: 428 PAV------------QKVSQASIDQSRQMKYQSFNEYRKRFMLKPYESFEELTG---EKE 472 + + ++ +SR +N +R+ L E+ +L + Sbjct: 518 DEIRERLFEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLK 577 Query: 473 MSAELEALYGDIDAVELYPALLVE 496 ++ +L YG + ++++ + E Sbjct: 578 LARKLMEQYGTPNNIDIWMGGVSE 601 >1CXP-C nrPDB Length = 466 Score = 189 bits (481), Expect = 2e-48, Method: Composition-based stats. Identities = 66/324 (20%), Positives = 116/324 (35%), Gaps = 40/324 (12%) Query: 208 NGLGHGVDLNHIYGETLARQRKLRLFKD--GKMKYQII-----DGEMYPPTVKDTQAEMI 260 N L VD + +YG R LR + G + + + D + Sbjct: 53 NALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLT 112 Query: 261 YPPQVPEHLRFAVGQEVFGLVPGLMMYATIWLREHNRVCDVLKQEHPEWGDEQLFQTSRL 320 F G +P L T+ LREHNR+ LK +P W E+L+Q +R Sbjct: 113 NRSARIP--CFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARK 170 Query: 321 ILIGETIKIVIEDYVQHLSGYHFKLKFDPELL-FNKQFQYQNRIAAEF-NTLYHWHPLL- 377 I+ I DY+ + G K+ P +N RIA F N + H L+ Sbjct: 171 IVGAMVQIITYRDYLPLVLGPTAMRKYLPTYRSYNDSV--DPRIANVFTNAFRYGHTLIQ 228 Query: 378 PDTFQIHDQKYNYQQ----------FIYNNSILLEHGITQFVESFTRQIAGRVAGGRNVP 427 P F++ D +Y + F + ++LE GI + A + Sbjct: 229 PFMFRL-DNRYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAV 287 Query: 428 PAV------------QKVSQASIDQSRQMKYQSFNEYRKRFMLKPYESFEELTG---EKE 472 + + ++ +SR +N +R+ L E+ +L + Sbjct: 288 DEIRERLFEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLK 347 Query: 473 MSAELEALYGDIDAVELYPALLVE 496 ++ +L YG + ++++ + E Sbjct: 348 LARKLMEQYGTPNNIDIWMGGVSE 371 >6AZP-A nrPDB Length = 577 Score = 189 bits (480), Expect = 3e-48, Method: Composition-based stats. Identities = 66/324 (20%), Positives = 116/324 (35%), Gaps = 40/324 (12%) Query: 208 NGLGHGVDLNHIYGETLARQRKLRLFKD--GKMKYQII-----DGEMYPPTVKDTQAEMI 260 N L VD + +YG R LR + G + + + D + Sbjct: 165 NALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLT 224 Query: 261 YPPQVPEHLRFAVGQEVFGLVPGLMMYATIWLREHNRVCDVLKQEHPEWGDEQLFQTSRL 320 F G +P L T+ LREHNR+ LK +P W E+L+Q +R Sbjct: 225 NRSARIP--CFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARK 282 Query: 321 ILIGETIKIVIEDYVQHLSGYHFKLKFDPELL-FNKQFQYQNRIAAEF-NTLYHWHPLL- 377 I+ I DY+ + G K+ P +N RIA F N + H L+ Sbjct: 283 IVGAMVQIITYRDYLPLVLGPTAMRKYLPTYRSYNDSV--DPRIANVFTNAFRYGHTLIQ 340 Query: 378 PDTFQIHDQKYNYQQ----------FIYNNSILLEHGITQFVESFTRQIAGRVAGGRNVP 427 P F++ D +Y + F + ++LE GI + A + Sbjct: 341 PFMFRL-DNRYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAV 399 Query: 428 PAV------------QKVSQASIDQSRQMKYQSFNEYRKRFMLKPYESFEELTG---EKE 472 + + ++ +SR +N +R+ L E+ +L + Sbjct: 400 DEIRERLFEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLK 459 Query: 473 MSAELEALYGDIDAVELYPALLVE 496 ++ +L YG + ++++ + E Sbjct: 460 LARKLMEQYGTPNNIDIWMGGVSE 483 >3ERH-A nrPDB Length = 595 Score = 172 bits (436), Expect = 4e-43, Method: Composition-based stats. Identities = 62/330 (18%), Positives = 109/330 (33%), Gaps = 34/330 (10%) Query: 208 NGLGHGVDLNHIYGETLARQRKLRLFKD--GKMKYQIID---GEMYPPTVKDTQAEMIYP 262 N + +D + +YG + +LR G M G Y P + + Sbjct: 181 NAVTSFLDASLVYGSEPSLASRLRNLSSPLGLMAVNQEAWDHGLAYLPFNNKKPSPCEFI 240 Query: 263 PQVPEHLRFAVGQEVFGLVPGLMMYATIWLREHNRVCDVLKQEHPEWGDEQLFQTSRLIL 322 F G L T+ LREHNR+ LK+ +P W E+L+Q +R IL Sbjct: 241 NTTARVPCFLAGDFRASEQILLATAHTLLLREHNRLARELKKLNPHWNGEKLYQEARKIL 300 Query: 323 IGETIKIVIEDYVQHLSGYHFKLKFDPELLFNKQFQYQNRIAAEFNTLYHW-HPLLPDTF 381 I DY+ + G + P +N RI+ F + + H +P T Sbjct: 301 GAFIQIITFRDYLPIVLGSEMQKWIPPYQGYNNSV--DPRISNVFTFAFRFGHMEVPSTV 358 Query: 382 QIHDQKYNY----------QQFIYNNSILLEHGITQFVESFTRQIAGRVAGGRNVPP--- 428 D+ Y F I+ + GI + + + + V Sbjct: 359 SRLDENYQPWGPEAELPLHTLFFNTWRIIKDGGIDPLTRGLLAKKSKLMNQDKMVTSELR 418 Query: 429 ----------AVQKVSQASIDQSRQMKYQSFNEYRKRFML---KPYESFEELTGEKEMSA 475 ++ ++ + R +N +R L K + + + K ++ Sbjct: 419 NKLFQPTHKIHGFDLAAINLQRCRDHGMPGYNSWRGFCGLSQPKTLKGLQTVLKNKILAK 478 Query: 476 ELEALYGDIDAVELYPALLVEKPRPDAIFG 505 +L LY D ++++ E G Sbjct: 479 KLMDLYKTPDNIDIWIGGNAEPMVERGRVG 508 >2VJ2-A nrPDB Length = 169 Score = 46.3 bits (108), Expect = 4e-05, Method: Composition-based stats. Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 2/39 (5%) Query: 19 NPCCSH-PCQNRGVCMSVGFDQYKCDCTRTGFYGENCST 56 N C +H PC N G C + G D+Y+C C G+ G NC Sbjct: 132 NYCGTHQPCLNGGTCSNTGPDKYQCSCPE-GYSGPNCEI 169 >4CC0-A nrPDB Length = 312 Score = 46.3 bits (108), Expect = 4e-05, Method: Composition-based stats. Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 2/39 (5%) Query: 19 NPCCSH-PCQNRGVCMSVGFDQYKCDCTRTGFYGENCST 56 N C +H PC N G C + G D+Y+C C G+ G NC Sbjct: 267 NYCGTHQPCLNGGTCSNTGPDKYQCSCPE-GYSGPNCEI 304 >5BO1-A nrPDB Length = 150 Score = 46.3 bits (108), Expect = 4e-05, Method: Composition-based stats. Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 2/39 (5%) Query: 19 NPCCSH-PCQNRGVCMSVGFDQYKCDCTRTGFYGENCST 56 N C +H PC N G C + G D+Y+C C G+ G NC Sbjct: 113 NYCGTHQPCLNGGTCSNTGPDKYQCSCPE-GYSGPNCEI 150 >5MWB-A nrPDB Length = 156 Score = 45.1 bits (105), Expect = 8e-05, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 5/69 (7%) Query: 18 ANPCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENCSTPEFLTRIKLFLKPTPNTVHYI 77 N C S+PC N G C+ ++++C C GF G C + +++ + P ++H+I Sbjct: 82 INECQSNPCVNNGQCVD-KVNRFQCLCP-PGFTGPVCQIDG--SGLEVLFQ-GPGSLHHI 136 Query: 78 LTHFKGFWN 86 L K WN Sbjct: 137 LDAQKMVWN 145 Score = 35.1 bits (79), Expect = 0.087, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 19/32 (59%), Gaps = 2/32 (6%) Query: 23 SHPCQNRGVCMSVGFDQYKCDCTRTGFYGENC 54 S+PC++ G C++ + C+C + G+ G C Sbjct: 11 SNPCEHAGKCVNTD-GAFHCECLK-GYAGPRC 40 >5MW7-A nrPDB Length = 332 Score = 42.8 bits (99), Expect = 4e-04, Method: Composition-based stats. Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 7/53 (13%) Query: 7 LLCAVLALSHTANPCCSH-PCQNRGVCMSVGFDQYKCDCTRTGFYGENCSTPE 58 LLC N C SH PC N G C++ DQY+C C G+ G NC E Sbjct: 276 LLC-----DKDLNYCGSHHPCTNGGTCINAEPDQYRCTCP-DGYSGRNCEKAE 322 >1IQG-L nrPDB Length = 96 Score = 41.2 bits (95), Expect = 0.001, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 5/42 (11%) Query: 21 CCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENCSTPEFLTR 62 C + PCQN+G C G +Y C C GF G+NC E TR Sbjct: 7 CETSPCQNQGKC-KDGLGEYTCTCLE-GFEGKNC---ELFTR 43 >1NFU-B nrPDB Length = 195 Score = 41.2 bits (95), Expect = 0.001, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 5/42 (11%) Query: 21 CCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENCSTPEFLTR 62 C + PCQN+G C G +Y C C GF G+NC E TR Sbjct: 45 CETSPCQNQGKC-KDGLGEYTCTCLE-GFEGKNC---ELFTR 81 >4ZH8-B nrPDB Length = 133 Score = 41.2 bits (95), Expect = 0.001, Method: Composition-based stats. Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 5/43 (11%) Query: 21 CCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENCSTPEFLTRI 63 C + PCQN+G C G +Y C C GF G+NC E T++ Sbjct: 45 CETSPCQNQGKC-KDGLGEYTCTCLE-GFEGKNC---ELFTKL 82 >2H9E-L nrPDB Length = 149 Score = 40.9 bits (94), Expect = 0.002, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 5/42 (11%) Query: 21 CCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENCSTPEFLTR 62 C + PCQN+G C G +Y C C GF G+NC E TR Sbjct: 5 CETSPCQNQGKC-KDGLGEYTCTCLE-GFEGKNC---ELFTR 41 >4BXW-A nrPDB Length = 423 Score = 40.9 bits (94), Expect = 0.002, Method: Composition-based stats. Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%) Query: 21 CCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENC 54 C S+PC RG+C G Y C C +G+ G+NC Sbjct: 50 CSSNPCHYRGIC-KDGIGSYTCTCL-SGYEGKNC 81 >4XBM-A nrPDB Length = 531 Score = 40.5 bits (93), Expect = 0.002, Method: Composition-based stats. Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%) Query: 18 ANPCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENCSTP 57 + C S PC N G C G + + C C G+ G NCS P Sbjct: 424 VDDCASSPCANGGTC-RDGVNDFSCTCP-PGYTGRNCSAP 461 Score = 38.2 bits (87), Expect = 0.011, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%) Query: 15 SHTANPCCSH-PCQNRGVCMSVGFDQYKCDCTRTGFYGENC 54 + N C H PC+N C + G Y C C R G+ G C Sbjct: 266 NQDLNYCTHHKPCKNGATCTNTGQGSYTCSC-RPGYTGATC 305 Score = 36.2 bits (82), Expect = 0.043, Method: Composition-based stats. Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 2/34 (5%) Query: 21 CCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENC 54 C S PC N C+ +G D Y C C + GF G +C Sbjct: 389 CSSSPCSNGAKCVDLG-DAYLCRC-QAGFSGRHC 420 Score = 30.8 bits (68), Expect = 1.7, Method: Composition-based stats. Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 1/38 (2%) Query: 17 TANPCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENC 54 +A C PC N G C Y C C G+ G NC Sbjct: 346 SAMTCADGPCFNGGRCSDSPDGGYSCRCP-VGYSGFNC 382 >5FMA-A nrPDB Length = 154 Score = 40.1 bits (92), Expect = 0.003, Method: Composition-based stats. Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%) Query: 20 PCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENC 54 PC PCQN G C G ++C C GF G+NC Sbjct: 81 PCSPSPCQNGGTCRPTGDVTHECACL-PGFTGQNC 114 Score = 36.2 bits (82), Expect = 0.037, Method: Composition-based stats. Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%) Query: 19 NPCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENC 54 +PC S+PC N G C+ Y C C + F+G C Sbjct: 2 DPCASNPCANGGQCLPFE-ASYICHCPPS-FHGPTC 35 >1WHE-A nrPDB Length = 86 Score = 38.6 bits (88), Expect = 0.007, Method: Composition-based stats. Identities = 20/42 (47%), Positives = 22/42 (52%), Gaps = 5/42 (11%) Query: 21 CCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENCSTPEFLTR 62 C HPC N+G C G Y C C GF G+NC EF TR Sbjct: 50 CEGHPCLNQGHC-KDGIGDYTCTCAE-GFEGKNC---EFSTR 86 >5UK5-A nrPDB Length = 205 Score = 38.2 bits (87), Expect = 0.010, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 4/46 (8%) Query: 13 ALSHTANPCC--SHPCQNRGVCMSVGFDQYKCDCTRTGFYGENCST 56 A S + C ++PC++ G C++ ++C C + G+ G C Sbjct: 116 ACSQDVDECALGANPCEHAGKCLNT-LGSFECQCLQ-GYTGPRCEI 159 Score = 34.3 bits (77), Expect = 0.18, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Query: 18 ANPCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENC 54 N C S+PCQN C+ +++C C G+ G C Sbjct: 161 VNECISNPCQNDATCLD-QIGEFQCICM-PGYEGVYC 195 >4CUD-A nrPDB Length = 135 Score = 37.8 bits (86), Expect = 0.013, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 18/68 (26%) Query: 19 NPCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENCSTPEFLTRIKLFLKPTPNTVHYIL 78 + C S PC + G C+ ++++C+C TGF G C +H+IL Sbjct: 84 DECASSPCLHNGRCLD-KINEFQCECP-TGFTGHLCQVD----------------LHHIL 125 Query: 79 THFKGFWN 86 K WN Sbjct: 126 DAQKMVWN 133 Score = 36.2 bits (82), Expect = 0.036, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 22/44 (50%), Gaps = 4/44 (9%) Query: 15 SHTANPCC--SHPCQNRGVCMSVGFDQYKCDCTRTGFYGENCST 56 + + C ++PC++ G C++ ++C C + G+ G C Sbjct: 2 AQDVDECSLGANPCEHAGKCINT-LGSFECQCLQ-GYTGPRCEI 43 Score = 35.9 bits (81), Expect = 0.059, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Query: 18 ANPCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENCST 56 N C S+PCQN C+ +++C C G+ G +C Sbjct: 45 VNECVSNPCQNDATCLD-QIGEFQCICM-PGYEGVHCEV 81 >1TOZ-A nrPDB Length = 116 Score = 35.9 bits (81), Expect = 0.050, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 21/43 (48%), Gaps = 4/43 (9%) Query: 16 HTANPCC--SHPCQNRGVCMSVGFDQYKCDCTRTGFYGENCST 56 + C ++PC++ G C++ ++C C + G+ G C Sbjct: 1 QDVDECSLGANPCEHAGKCINT-LGSFECQCLQ-GYTGPRCEI 41 Score = 35.9 bits (81), Expect = 0.059, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Query: 18 ANPCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENCST 56 N C S+PCQN C+ +++C C G+ G +C Sbjct: 43 VNECVSNPCQNDATCLD-QIGEFQCICM-PGYEGVHCEV 79 Score = 35.5 bits (80), Expect = 0.061, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 2/36 (5%) Query: 19 NPCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENC 54 + C S PC + G C+ ++++C+C TGF G C Sbjct: 82 DECASSPCLHNGRCLD-KINEFQCECP-TGFTGHLC 115 >5MVX-A nrPDB Length = 309 Score = 35.9 bits (81), Expect = 0.054, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 2/40 (5%) Query: 16 HTANPCCSH-PCQNRGVCMSVGFDQYKCDCTRTGFYGENC 54 N C H PC+N C + G Y C C R G+ G +C Sbjct: 257 QDLNYCTHHSPCKNGATCSNSGQRSYTCTC-RPGYTGVDC 295 >4XL1-A nrPDB Length = 118 Score = 35.5 bits (80), Expect = 0.061, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 19/34 (55%), Gaps = 2/34 (5%) Query: 23 SHPCQNRGVCMSVGFDQYKCDCTRTGFYGENCST 56 ++PC++ G C++ ++C C + G+ G C Sbjct: 10 ANPCEHAGKCLNT-LGSFECQCLQ-GYTGPRCEI 41 Score = 34.7 bits (78), Expect = 0.12, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 2/39 (5%) Query: 18 ANPCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENCST 56 N C S+PCQN C+ +++C C G+ G C Sbjct: 43 VNECISNPCQNDATCLD-QIGEFQCICM-PGYEGVYCEI 79 Score = 32.4 bits (72), Expect = 0.59, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%) Query: 19 NPCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENC 54 + C S PC + G C+ +++ C C + GF G C Sbjct: 82 DECASSPCLHNGRCVD-KINEFLCQCPK-GFSGHLC 115 >3H5C-B nrPDB Length = 317 Score = 35.5 bits (80), Expect = 0.062, Method: Composition-based stats. Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%) Query: 19 NPCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENC 54 +PC S PC + G C + Y C C+ G+ G NC Sbjct: 6 SPCISQPCLHNGSCQDSIWG-YTCTCS-PGYEGSNC 39 >4D90-A nrPDB Length = 143 Score = 34.7 bits (78), Expect = 0.11, Method: Composition-based stats. Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%) Query: 21 CCSHPCQNRGVCMSVGFD-QYKCDCTRTGFYGENCST 56 C +PC+N G+C+ D + C+C GF NCS+ Sbjct: 3 CDPNPCENGGICLPGLADGSFSCECP-DGFTDPNCSS 38 Score = 33.9 bits (76), Expect = 0.18, Method: Composition-based stats. Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%) Query: 16 HTANPCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENC 54 H N C PC+N G+C + Y C+C F G NC Sbjct: 95 HNINECEVEPCKNGGICTDL-VANYSCECPGE-FMGRNC 131 Score = 33.2 bits (74), Expect = 0.30, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 7/44 (15%) Query: 17 TANPCCSHPCQNRGVC------MSVGFDQYKCDCTRTGFYGENC 54 +A PC +PC N G C F Y C C R GF G +C Sbjct: 51 SAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPR-GFNGIHC 93 >1QFK-L nrPDB Length = 104 Score = 32.8 bits (73), Expect = 0.44, Method: Composition-based stats. Identities = 16/36 (44%), Positives = 16/36 (44%), Gaps = 2/36 (5%) Query: 21 CCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENCST 56 C S PCQN G C Y C C F G NC T Sbjct: 2 CASSPCQNGGSC-KDQLQSYICFCL-PAFEGRNCET 35 >1DAN-L nrPDB Length = 152 Score = 32.8 bits (73), Expect = 0.44, Method: Composition-based stats. Identities = 16/36 (44%), Positives = 16/36 (44%), Gaps = 2/36 (5%) Query: 21 CCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENCST 56 C S PCQN G C Y C C F G NC T Sbjct: 50 CASSPCQNGGSC-KDQLQSYICFCL-PAFEGRNCET 83 >5MS9-A nrPDB Length = 177 Score = 32.4 bits (72), Expect = 0.57, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 5/40 (12%) Query: 15 SHTANPCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENC 54 +H P C C N G C++ +C CT GF G C Sbjct: 33 THCGQPVCESGCLNGGRCVAPN----RCACT-YGFTGPQC 67 >3DWC-A nrPDB Length = 505 Score = 32.0 bits (71), Expect = 0.69, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 2/56 (3%) Query: 460 PYESFEELTGEKEMSAELEALYGDIDAVELYPALLVEKPRPDAIFGETMVEVGAPF 515 PYE+ ++ L+ ++G++ + P LL E GET++E PF Sbjct: 154 PYEALVDIYEPGMTLQRLDEIFGNVRS--WLPELLKEVQEKQKALGETVLEPKGPF 207 >2ZUE-A nrPDB Length = 629 Score = 31.2 bits (69), Expect = 1.3, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 32/83 (38%), Gaps = 3/83 (3%) Query: 435 QASIDQSRQMKYQSFNEYRKRFMLKPYESFEELTGEKEMSAELEALYGDIDAVELYPALL 494 + +++ R+ + N L E L E+ E+ + +++ ELY L Sbjct: 187 ERIMNELRERGLKD-NPIDHALGLLYVEVNRRLEDNPELENEIRDIMKKLESGELYGRKL 245 Query: 495 VEKPRPDAIFGETMVEVGAPFSL 517 E+ + T ++G + L Sbjct: 246 AEEVVRAQMV--TTYKLGVKYDL 266 >4R16-A nrPDB Length = 418 Score = 30.8 bits (68), Expect = 1.7, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 28/68 (41%) Query: 443 QMKYQSFNEYRKRFMLKPYESFEELTGEKEMSAELEALYGDIDAVELYPALLVEKPRPDA 502 + ++ E R L ES ++M+ LE L G + V+ Y A E+ P Sbjct: 98 ERAIRTVAEVMDRGALVIIESTIPPGTTEKMARLLENLTGLREGVDFYVAHAPERVMPGR 157 Query: 503 IFGETMVE 510 IF E + Sbjct: 158 IFKELVYN 165 >1FCV-A nrPDB Length = 350 Score = 30.5 bits (67), Expect = 2.1, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 260 IYPPQVPEHLRFAVGQEVFGLVPGLMMYATIWLREHNRVC-DVLKQEHPEWGDEQLFQTS 318 Q+P+ VG F + L+ + ++ +V+++EHP W D+++ Q + Sbjct: 94 HLINQIPDKSFPGVGVIDFESWRPIFRQNWASLQPYKKLSVEVVRREHPFWDDQRVEQEA 153 Query: 319 R 319 + Sbjct: 154 K 154 >5ZWM-O nrPDB Length = 587 Score = 29.7 bits (65), Expect = 4.1, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 22/42 (52%) Query: 438 IDQSRQMKYQSFNEYRKRFMLKPYESFEELTGEKEMSAELEA 479 ++++ + + NE R++ +KP F+E + + S +E Sbjct: 1 MNKTENLSIEETNEIREKLGMKPIPVFQEKNTDHKESLSIEE 42 >4V6W-CL nrPDB Length = 218 Score = 28.5 bits (62), Expect = 9.0, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 20/47 (42%) Query: 429 AVQKVSQASIDQSRQMKYQSFNEYRKRFMLKPYESFEELTGEKEMSA 475 AV + + +SRQ Q EYR + +L P + GE + Sbjct: 96 AVDRRRKNKSLESRQRNIQRLKEYRSKLILFPINEKKIRAGESSLEE 142 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.311 0.130 0.361 Lambda K H 0.267 0.0395 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,145,706 Number of Sequences: 36641 Number of extensions: 945876 Number of successful extensions: 2423 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 35 Number of HSP's successfully gapped in prelim test: 48 Number of HSP's that attempted gapping in prelim test: 2304 Number of HSP's gapped (non-prelim): 126 length of query: 604 length of database: 10,336,785 effective HSP length: 103 effective length of query: 501 effective length of database: 6,562,762 effective search space: 3287943762 effective search space used: 3287943762 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 62 (28.5 bits)