BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= P35189
         (244 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

5SVA-n nrPDB                                                          496   e-141
6MIP-A nrPDB                                                          282   1e-76
2L7E-A nrPDB                                                          257   3e-69
5YYF-A nrPDB                                                           56   1e-08
6AXJ-A nrPDB                                                           52   2e-07
5J9S-A nrPDB                                                           46   1e-05
5XTZ-A nrPDB                                                           40   7e-04
5Y8V-B nrPDB                                                           39   0.002
5VNA-A nrPDB                                                           39   0.002
5IQL-A nrPDB                                                           37   0.007
5K6L-A nrPDB                                                           32   0.25 
2DTU-A nrPDB                                                           32   0.36 
1F2N-A nrPDB                                                           28   3.2  
4DSR-A nrPDB                                                           27   7.0  

>5SVA-n nrPDB
          Length = 244

 Score =  496 bits (1276), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 244/244 (100%), Positives = 244/244 (100%)

Query: 1   MVATVKRTIRIKTQQHILPEVPPVENFPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHP 60
           MVATVKRTIRIKTQQHILPEVPPVENFPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHP
Sbjct: 1   MVATVKRTIRIKTQQHILPEVPPVENFPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHP 60

Query: 61  TFANPNRTFTDPPFRIEEQGWGGFPLDISVFLLEKAGERKIPHDLNFLQESYEVEHVIQI 120
           TFANPNRTFTDPPFRIEEQGWGGFPLDISVFLLEKAGERKIPHDLNFLQESYEVEHVIQI
Sbjct: 61  TFANPNRTFTDPPFRIEEQGWGGFPLDISVFLLEKAGERKIPHDLNFLQESYEVEHVIQI 120

Query: 121 PLNKPLLTEELAKSGSTEETTANTGTIGKRRTTTNTTAEPKAKRAKTGSASTVKGSVDLE 180
           PLNKPLLTEELAKSGSTEETTANTGTIGKRRTTTNTTAEPKAKRAKTGSASTVKGSVDLE
Sbjct: 121 PLNKPLLTEELAKSGSTEETTANTGTIGKRRTTTNTTAEPKAKRAKTGSASTVKGSVDLE 180

Query: 181 KLAFGLTKLNEDDLVGVVQMVTDNKTPEMNVTNNVEEGEFIIDLYSLPEGLLKSLWDYVK 240
           KLAFGLTKLNEDDLVGVVQMVTDNKTPEMNVTNNVEEGEFIIDLYSLPEGLLKSLWDYVK
Sbjct: 181 KLAFGLTKLNEDDLVGVVQMVTDNKTPEMNVTNNVEEGEFIIDLYSLPEGLLKSLWDYVK 240

Query: 241 KNTE 244
           KNTE
Sbjct: 241 KNTE 244


>6MIP-A nrPDB
          Length = 142

 Score =  282 bits (721), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 136/137 (99%), Positives = 136/137 (99%)

Query: 1   MVATVKRTIRIKTQQHILPEVPPVENFPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHP 60
           MVATVKRTIRIKTQQHILPEVPPVENFPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHP
Sbjct: 6   MVATVKRTIRIKTQQHILPEVPPVENFPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHP 65

Query: 61  TFANPNRTFTDPPFRIEEQGWGGFPLDISVFLLEKAGERKIPHDLNFLQESYEVEHVIQI 120
           TFANPNRTFTDPPFRIEEQGW GFPLDISVFLLEKAGERKIPHDLNFLQESYEVEHVIQI
Sbjct: 66  TFANPNRTFTDPPFRIEEQGWAGFPLDISVFLLEKAGERKIPHDLNFLQESYEVEHVIQI 125

Query: 121 PLNKPLLTEELAKSGST 137
           PLNKPLLTEELAKSGST
Sbjct: 126 PLNKPLLTEELAKSGST 142


>2L7E-A nrPDB
          Length = 131

 Score =  257 bits (657), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 123/123 (100%), Positives = 123/123 (100%)

Query: 1   MVATVKRTIRIKTQQHILPEVPPVENFPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHP 60
           MVATVKRTIRIKTQQHILPEVPPVENFPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHP
Sbjct: 1   MVATVKRTIRIKTQQHILPEVPPVENFPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHP 60

Query: 61  TFANPNRTFTDPPFRIEEQGWGGFPLDISVFLLEKAGERKIPHDLNFLQESYEVEHVIQI 120
           TFANPNRTFTDPPFRIEEQGWGGFPLDISVFLLEKAGERKIPHDLNFLQESYEVEHVIQI
Sbjct: 61  TFANPNRTFTDPPFRIEEQGWGGFPLDISVFLLEKAGERKIPHDLNFLQESYEVEHVIQI 120

Query: 121 PLN 123
           PLN
Sbjct: 121 PLN 123


>5YYF-A nrPDB
          Length = 141

 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 34/57 (59%)

Query: 52  DKVIYHLHPTFANPNRTFTDPPFRIEEQGWGGFPLDISVFLLEKAGERKIPHDLNFL 108
           +KV++HLH +F  P R   DPP+++EE G+ GF L I V+   K   RK+  D +  
Sbjct: 52  EKVVFHLHESFPRPKRVCKDPPYKVEESGYAGFILPIEVYFKNKEEPRKVRFDYDLF 108


>6AXJ-A nrPDB
          Length = 169

 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 4/84 (4%)

Query: 26  NFPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFANPNRTFTDPPFRIEEQGWGGFP 85
           N P     +  + +     E  +    KV++ LH T+ NP R+   PPF + E GWG F 
Sbjct: 32  NAPAEHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPNPVRSIEAPPFELTETGWGEFD 91

Query: 86  LDISVFLLEKAGERKIPHDLNFLQ 109
           ++I V+ +E+A E+     LNF  
Sbjct: 92  INIKVYFVEEANEKV----LNFYH 111


>5J9S-A nrPDB
          Length = 155

 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 30/50 (60%)

Query: 52  DKVIYHLHPTFANPNRTFTDPPFRIEEQGWGGFPLDISVFLLEKAGERKI 101
           +KV++ LH +F  P R   +PP+++EE G+ GF + I V    K   RK+
Sbjct: 50  EKVVFWLHDSFPKPRRVCKEPPYKVEESGYAGFIMPIEVHFKNKEEPRKV 99


>5XTZ-A nrPDB
          Length = 163

 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 3/58 (5%)

Query: 25 ENFPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFANPNRTFTDPPFRIEEQGWG 82
          E+    QW++ +    +E  ++ A +  K+ + LH ++ NP R  T PP+ I E GWG
Sbjct: 44 EDGHTHQWTVYVKPYRNE--DMSAYV-KKIQFKLHESYGNPLRVVTKPPYEITETGWG 98


>5Y8V-B nrPDB
          Length = 140

 Score = 39.3 bits (90), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 3/53 (5%)

Query: 30 RQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFANPNRTFTDPPFRIEEQGWG 82
           QW++ +    +E  ++ A +  K+ + LH ++ NP R  T PP+ I E GWG
Sbjct: 25 HQWTVYVKPYRNE--DMSAYV-KKIQFKLHESYGNPLRVVTKPPYEITETGWG 74


>5VNA-A nrPDB
          Length = 148

 Score = 39.3 bits (90), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 3/52 (5%)

Query: 31 QWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFANPNRTFTDPPFRIEEQGWG 82
          QW++ +    +E  ++ A +  K+ + LH ++ NP R  T PP+ I E GWG
Sbjct: 46 QWTVYVKPYRNE--DMSAYV-KKIQFKLHESYGNPLRVVTKPPYEITETGWG 94


>5IQL-A nrPDB
          Length = 133

 Score = 37.0 bits (84), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 5/63 (7%)

Query: 53  KVIYHLHPTFANPNRTF--TDPPFRIEEQGWGGFPLDISVFLLEKAGER-KIPHDLNFLQ 109
           KV + LHP++  PN      +PPF +  +GWG FP+ + V   +   +R  I H+L  L 
Sbjct: 54  KVWFFLHPSYK-PNDLVEVREPPFHLTRRGWGEFPVRVQVHFKDSQNKRIDIIHNLK-LD 111

Query: 110 ESY 112
            +Y
Sbjct: 112 RTY 114


>5K6L-A nrPDB
          Length = 921

 Score = 32.0 bits (71), Expect = 0.25,   Method: Composition-based stats.
 Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 23/129 (17%)

Query: 89  SVFLLEKAGERKIPHDLNFLQESYEV------EHVIQIPLNKPLLTEELAKSGSTEETTA 142
           S F+LE AGE  +    N ++ESY+       E+++   L+K L   E  K     E + 
Sbjct: 373 SCFVLE-AGEYTVYEGKN-VRESYKEGSFTLEENIVTEKLSKALAPMESFKRMKASENSD 430

Query: 143 NTGTIG-----------KRRTTTNTTAE-PKAKRAKTGSASTVKGSVDLEKLAFGLTKLN 190
            T ++            K+R   N   E P+   A+      + GSVD+EK    + +L+
Sbjct: 431 GTLSVKYEDVPVSDVDEKKRRLDNMPVEIPQDFTARYSLKDVLSGSVDMEKF---IARLS 487

Query: 191 EDDLVGVVQ 199
           +DDL  +V+
Sbjct: 488 DDDLACIVR 496


>2DTU-A nrPDB
          Length = 896

 Score = 31.6 bits (70), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 2/30 (6%)

Query: 29  VRQWSIEIV--LLDDEGKEIPATIFDKVIY 56
           V +WSIEI   L +  G E+P+ I DK+IY
Sbjct: 159 VEEWSIEIAAKLQEQGGDEVPSEIIDKIIY 188


>1F2N-A nrPDB
          Length = 238

 Score = 28.1 bits (61), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)

Query: 138 EETTANTGTIGKR--RTTTNTTAEPKAKRAKTGSASTVKGSV 177
           ++T +N G  GKR  R     +AEP+ +RA    AS + G+V
Sbjct: 5   KKTNSNQGQQGKRKSRRPRGRSAEPQLQRAPVAQASRISGTV 46


>4DSR-A nrPDB
          Length = 184

 Score = 27.3 bits (59), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 3/44 (6%)

Query: 101 IPHDLNFLQE---SYEVEHVIQIPLNKPLLTEELAKSGSTEETT 141
           IP  +N+L E     EV+ VI + ++ P   +  AKS   ++TT
Sbjct: 75  IPGYINYLDELVKEKEVDQVIVVTVDNPFANQAWAKSLGVKDTT 118


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

5SVA-n nrPDB                                                          461   e-131
6MIP-A nrPDB                                                          251   2e-67
2L7E-A nrPDB                                                          226   5e-60
6AXJ-A nrPDB                                                          122   1e-28
5YYF-A nrPDB                                                          121   3e-28
5J9S-A nrPDB                                                          115   2e-26
5XTZ-A nrPDB                                                           93   8e-20
5VNA-A nrPDB                                                           92   3e-19
5Y8V-B nrPDB                                                           91   5e-19

Sequences not found previously or not previously below threshold:

5IQL-A nrPDB                                                           71   5e-13
1F2N-A nrPDB                                                           34   0.093
4RHH-A nrPDB                                                           31   0.50 
1TTE-A nrPDB                                                           31   0.54 
3MKD-A nrPDB                                                           30   1.1  
2JJ9-A nrPDB                                                           30   1.1  
3FE5-A nrPDB                                                           29   1.8  
1PXY-A nrPDB                                                           29   2.2  
3QWV-A nrPDB                                                           29   2.3  
2BII-A nrPDB                                                           29   3.0  
2BIH-A nrPDB                                                           29   3.0  
1S7U-A nrPDB                                                           28   3.5  
1Y3T-A nrPDB                                                           28   3.7  
5J6H-A nrPDB                                                           28   3.7  
4C1O-A nrPDB                                                           28   3.9  
5HPQ-A nrPDB                                                           28   4.0  
4J0Q-A nrPDB                                                           27   6.5  
1ZS8-A nrPDB                                                           27   9.2  

>5SVA-n nrPDB
          Length = 244

 Score =  461 bits (1187), Expect = e-131,   Method: Composition-based stats.
 Identities = 244/244 (100%), Positives = 244/244 (100%)

Query: 1   MVATVKRTIRIKTQQHILPEVPPVENFPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHP 60
           MVATVKRTIRIKTQQHILPEVPPVENFPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHP
Sbjct: 1   MVATVKRTIRIKTQQHILPEVPPVENFPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHP 60

Query: 61  TFANPNRTFTDPPFRIEEQGWGGFPLDISVFLLEKAGERKIPHDLNFLQESYEVEHVIQI 120
           TFANPNRTFTDPPFRIEEQGWGGFPLDISVFLLEKAGERKIPHDLNFLQESYEVEHVIQI
Sbjct: 61  TFANPNRTFTDPPFRIEEQGWGGFPLDISVFLLEKAGERKIPHDLNFLQESYEVEHVIQI 120

Query: 121 PLNKPLLTEELAKSGSTEETTANTGTIGKRRTTTNTTAEPKAKRAKTGSASTVKGSVDLE 180
           PLNKPLLTEELAKSGSTEETTANTGTIGKRRTTTNTTAEPKAKRAKTGSASTVKGSVDLE
Sbjct: 121 PLNKPLLTEELAKSGSTEETTANTGTIGKRRTTTNTTAEPKAKRAKTGSASTVKGSVDLE 180

Query: 181 KLAFGLTKLNEDDLVGVVQMVTDNKTPEMNVTNNVEEGEFIIDLYSLPEGLLKSLWDYVK 240
           KLAFGLTKLNEDDLVGVVQMVTDNKTPEMNVTNNVEEGEFIIDLYSLPEGLLKSLWDYVK
Sbjct: 181 KLAFGLTKLNEDDLVGVVQMVTDNKTPEMNVTNNVEEGEFIIDLYSLPEGLLKSLWDYVK 240

Query: 241 KNTE 244
           KNTE
Sbjct: 241 KNTE 244


>6MIP-A nrPDB
          Length = 142

 Score =  251 bits (641), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 136/137 (99%), Positives = 136/137 (99%)

Query: 1   MVATVKRTIRIKTQQHILPEVPPVENFPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHP 60
           MVATVKRTIRIKTQQHILPEVPPVENFPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHP
Sbjct: 6   MVATVKRTIRIKTQQHILPEVPPVENFPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHP 65

Query: 61  TFANPNRTFTDPPFRIEEQGWGGFPLDISVFLLEKAGERKIPHDLNFLQESYEVEHVIQI 120
           TFANPNRTFTDPPFRIEEQGW GFPLDISVFLLEKAGERKIPHDLNFLQESYEVEHVIQI
Sbjct: 66  TFANPNRTFTDPPFRIEEQGWAGFPLDISVFLLEKAGERKIPHDLNFLQESYEVEHVIQI 125

Query: 121 PLNKPLLTEELAKSGST 137
           PLNKPLLTEELAKSGST
Sbjct: 126 PLNKPLLTEELAKSGST 142


>2L7E-A nrPDB
          Length = 131

 Score =  226 bits (577), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 123/123 (100%), Positives = 123/123 (100%)

Query: 1   MVATVKRTIRIKTQQHILPEVPPVENFPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHP 60
           MVATVKRTIRIKTQQHILPEVPPVENFPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHP
Sbjct: 1   MVATVKRTIRIKTQQHILPEVPPVENFPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHP 60

Query: 61  TFANPNRTFTDPPFRIEEQGWGGFPLDISVFLLEKAGERKIPHDLNFLQESYEVEHVIQI 120
           TFANPNRTFTDPPFRIEEQGWGGFPLDISVFLLEKAGERKIPHDLNFLQESYEVEHVIQI
Sbjct: 61  TFANPNRTFTDPPFRIEEQGWGGFPLDISVFLLEKAGERKIPHDLNFLQESYEVEHVIQI 120

Query: 121 PLN 123
           PLN
Sbjct: 121 PLN 123


>6AXJ-A nrPDB
          Length = 169

 Score =  122 bits (307), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 6/88 (6%)

Query: 22  PPVENFPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFANPNRTFTDPPFRIEEQGW 81
           PP  N P     +  + +     E  +    KV++ LH T+ NP R+   PPF + E GW
Sbjct: 30  PP--NAPAEHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPNPVRSIEAPPFELTETGW 87

Query: 82  GGFPLDISVFLLEKAGERKIPHDLNFLQ 109
           G F ++I V+ +E+A E+     LNF  
Sbjct: 88  GEFDINIKVYFVEEANEKV----LNFYH 111


>5YYF-A nrPDB
          Length = 141

 Score =  121 bits (304), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 4/87 (4%)

Query: 22  PPVENFPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFANPNRTFTDPPFRIEEQGW 81
           P VE F        +V +            +KV++HLH +F  P R   DPP+++EE G+
Sbjct: 26  PTVEGF----THDWMVFVRGPEHSNIQHFVEKVVFHLHESFPRPKRVCKDPPYKVEESGY 81

Query: 82  GGFPLDISVFLLEKAGERKIPHDLNFL 108
            GF L I V+   K   RK+  D +  
Sbjct: 82  AGFILPIEVYFKNKEEPRKVRFDYDLF 108


>5J9S-A nrPDB
          Length = 155

 Score =  115 bits (287), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 4/91 (4%)

Query: 18  LPEVPPVENFPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFANPNRTFTDPPFRIE 77
           L + P  E F        +V +    +       +KV++ LH +F  P R   +PP+++E
Sbjct: 20  LRKKPTTEGF----THDWMVFVRGPEQCDIQHFVEKVVFWLHDSFPKPRRVCKEPPYKVE 75

Query: 78  EQGWGGFPLDISVFLLEKAGERKIPHDLNFL 108
           E G+ GF + I V    K   RK+    +  
Sbjct: 76  ESGYAGFIMPIEVHFKNKEEPRKVCFTYDLF 106


>5XTZ-A nrPDB
          Length = 163

 Score = 93.3 bits (230), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 3/58 (5%)

Query: 25 ENFPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFANPNRTFTDPPFRIEEQGWG 82
          E+    QW++ +    +E  ++ A +  K+ + LH ++ NP R  T PP+ I E GWG
Sbjct: 44 EDGHTHQWTVYVKPYRNE--DMSAYV-KKIQFKLHESYGNPLRVVTKPPYEITETGWG 98


>5VNA-A nrPDB
          Length = 148

 Score = 91.7 bits (226), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 3/58 (5%)

Query: 25 ENFPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFANPNRTFTDPPFRIEEQGWG 82
          E+    QW++ +    +E  ++ A +  K+ + LH ++ NP R  T PP+ I E GWG
Sbjct: 40 EDGHTHQWTVYVKPYRNE--DMSAYV-KKIQFKLHESYGNPLRVVTKPPYEITETGWG 94


>5Y8V-B nrPDB
          Length = 140

 Score = 90.6 bits (223), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 3/58 (5%)

Query: 25 ENFPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFANPNRTFTDPPFRIEEQGWG 82
          E+    QW++ +    +E  ++ A +  K+ + LH ++ NP R  T PP+ I E GWG
Sbjct: 20 EDGHTHQWTVYVKPYRNE--DMSAYV-KKIQFKLHESYGNPLRVVTKPPYEITETGWG 74


>5IQL-A nrPDB
          Length = 133

 Score = 70.9 bits (172), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 5/106 (4%)

Query: 5   VKRTIRI-KTQQHILPEVPPVENFPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTF- 62
           VK+TI +    ++I P+     +    +W + +     E          KV + LHP++ 
Sbjct: 7   VKKTIVVGNVSKYIPPDKREENDQSTHKWMVYVRGSRREPS--INHFVKKVWFFLHPSYK 64

Query: 63  ANPNRTFTDPPFRIEEQGWGGFPLDISVFLLEKAGERK-IPHDLNF 107
            N      +PPF +  +GWG FP+ + V   +   +R  I H+L  
Sbjct: 65  PNDLVEVREPPFHLTRRGWGEFPVRVQVHFKDSQNKRIDIIHNLKL 110


>1F2N-A nrPDB
          Length = 238

 Score = 33.5 bits (75), Expect = 0.093,   Method: Composition-based stats.
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)

Query: 138 EETTANTGTIGKR--RTTTNTTAEPKAKRAKTGSASTVKGSV 177
           ++T +N G  GKR  R     +AEP+ +RA    AS + G+V
Sbjct: 5   KKTNSNQGQQGKRKSRRPRGRSAEPQLQRAPVAQASRISGTV 46


>4RHH-A nrPDB
          Length = 705

 Score = 30.9 bits (68), Expect = 0.50,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 30/91 (32%), Gaps = 7/91 (7%)

Query: 34  IEIVLLDDEGKEIPATIFDKVI--YHLHPTFANPNRTFTDPPFRIEEQGWGGFPLDI-SV 90
           IE   L D+ K + A           L      P        +R+       F L +  +
Sbjct: 296 IEKEWLSDDQKFMMAHAIRSYYGNTQLLEHEGKPIWVVNGGEYRMMNT----FDLTVDQL 351

Query: 91  FLLEKAGERKIPHDLNFLQESYEVEHVIQIP 121
           F   K     + + L+F  E Y  E  ++ P
Sbjct: 352 FFELKMNPWTVKNVLDFYVERYSYEDRVRFP 382


>1TTE-A nrPDB
          Length = 215

 Score = 30.9 bits (68), Expect = 0.54,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 22/95 (23%)

Query: 15  QHILPEVPPVENFPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFANPNRTFTDPPF 74
           + I+ E+  V++ P    ++E              + +  I+HL  TF  P  T    P+
Sbjct: 5   KRIMKEIQAVKDDPAAHITLE-------------FVSESDIHHLKGTFLGPPGT----PY 47

Query: 75  RIEEQGWGGFPLDISVFLLEKAGERKIPHDLNFLQ 109
                  G F +DI V +       K+  D     
Sbjct: 48  E-----GGKFVVDIEVPMEYPFKPPKMQFDTKVYH 77


>3MKD-A nrPDB
          Length = 692

 Score = 29.7 bits (65), Expect = 1.1,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 8/111 (7%)

Query: 36  IVLLDDEGKEIPATIFDKVIYHLHPTFANPNRTFTDPPFRIEEQG---WGGFPL-DISVF 91
           I+ L DE    P    + +I  LH  F+  N  + +P F   E G   + G  + +I  +
Sbjct: 524 ILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQDW 583

Query: 92  LLEKAGERKIPHDLNFLQESYEVEHVIQIPLNKPLLTEELAKSGSTEETTA 142
           L +     +   +L F   S   ++V+    N P +    AK G+   T A
Sbjct: 584 LEKNKDPLQQDLELCFKDSS---DNVVTKLFNDPNIASR-AKKGANFITVA 630


>2JJ9-A nrPDB
          Length = 788

 Score = 29.7 bits (65), Expect = 1.1,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 8/111 (7%)

Query: 36  IVLLDDEGKEIPATIFDKVIYHLHPTFANPNRTFTDPPFRIEEQG---WGGFPL-DISVF 91
           I+ L DE    P    + +I  LH  F+  N  + +P F   E G   + G  + +I  +
Sbjct: 536 ILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQDW 595

Query: 92  LLEKAGERKIPHDLNFLQESYEVEHVIQIPLNKPLLTEELAKSGSTEETTA 142
           L +     +   +L F   S   ++V+    N P +    AK G+   T A
Sbjct: 596 LEKNKDPLQQDLELCFKDSS---DNVVTKLFNDPNIASR-AKKGANFITVA 642


>3FE5-A nrPDB
          Length = 285

 Score = 29.3 bits (64), Expect = 1.8,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 26/57 (45%), Gaps = 1/57 (1%)

Query: 63  ANPNRTFTDPPFRIEEQGWGGFPLDISVFLLEKAGERKIPHDLNFLQESYEVEHVIQ 119
            NP++   +PPF +  +     P+ +  +L     E +    L+   ++YE + ++ 
Sbjct: 158 PNPDQLLKEPPFPLSTRSVME-PMCLEAWLDGHRKELQAGTPLSLFGDTYESQVMVH 213


>1PXY-A nrPDB
          Length = 506

 Score = 28.9 bits (63), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 2/58 (3%)

Query: 88  ISVFLLEKAGERKIPHDLNFLQESYEVEHVIQIPLNKPLL--TEELAKSGSTEETTAN 143
           I + LL     +K P  +  L++S +VE ++++P  K LL       K G  ++T +N
Sbjct: 119 IKIQLLADLNLKKTPQLVELLEDSDDVEELLRLPPEKVLLKWMNFHLKKGGYKKTVSN 176


>3QWV-A nrPDB
          Length = 433

 Score = 28.9 bits (63), Expect = 2.3,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 5/62 (8%)

Query: 4   TVKRTIRIKTQQHILPEVPPVEN-FPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTF 62
           TV+ T RI  +Q I PE  P E    VR++   +  LD+E K+    +    I  LH  +
Sbjct: 105 TVRLTARILAKQKIHPERTPSEKLLAVREFESHLDKLDNEKKD----LIQSDIAALHQFY 160

Query: 63  AN 64
           + 
Sbjct: 161 SK 162


>2BII-A nrPDB
          Length = 424

 Score = 28.5 bits (62), Expect = 3.0,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 31/86 (36%), Gaps = 4/86 (4%)

Query: 70  TDPPFRIEEQGWGGFPLDISVFLLEKAGERKIPHDLNFLQESYEVEHVIQIPLNKPLLTE 129
           ++PP  + +    GF   +S+  +   G      D N L     +E +++ P    L   
Sbjct: 7   SEPP--LTKLYDSGFLTPVSLHFVRNHGPVPYVPDENILDWEVSIEGMVETPYKIKL--S 62

Query: 130 ELAKSGSTEETTANTGTIGKRRTTTN 155
           ++ +      T       G RR   N
Sbjct: 63  DIMEQFDIYSTPVTMVCAGNRRKEQN 88


>2BIH-A nrPDB
          Length = 474

 Score = 28.5 bits (62), Expect = 3.0,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 31/86 (36%), Gaps = 4/86 (4%)

Query: 70  TDPPFRIEEQGWGGFPLDISVFLLEKAGERKIPHDLNFLQESYEVEHVIQIPLNKPLLTE 129
           ++PP  + +    GF   +S+  +   G      D N L     +E +++ P    L   
Sbjct: 57  SEPP--LTKLYDSGFLTPVSLHFVRNHGPVPYVPDENILDWEVSIEGMVETPYKIKL--S 112

Query: 130 ELAKSGSTEETTANTGTIGKRRTTTN 155
           ++ +      T       G RR   N
Sbjct: 113 DIMEQFDIYSTPVTMVCAGNRRKEQN 138


>1S7U-A nrPDB
          Length = 338

 Score = 28.2 bits (61), Expect = 3.5,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 19/61 (31%), Gaps = 8/61 (13%)

Query: 13  TQQHILPEVPPVENFPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFANPNRTFTDP 72
           TQ   L E  P  +   ++W+  +V L  E                H     P     +P
Sbjct: 225 TQDMELVETRPAGDGTFQKWASVVVPLGKEQNYTCRVY--------HEGLPEPLTLRWEP 276

Query: 73  P 73
           P
Sbjct: 277 P 277


>1Y3T-A nrPDB
          Length = 337

 Score = 28.2 bits (61), Expect = 3.7,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 20/56 (35%), Gaps = 3/56 (5%)

Query: 46  IPATIFDKVIYHLHPTFANPNRTFTDPPFRIEEQG---WGGFPLDISVFLLEKAGE 98
           + +      + HL+    NP      PP+  EE     +       ++  L++A  
Sbjct: 114 LVSYTMKGNVAHLYSVIGNPYDHAEHPPYASEEVSNERFAEAAAVATIVFLDEAKP 169


>5J6H-A nrPDB
          Length = 302

 Score = 28.2 bits (61), Expect = 3.7,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 19/61 (31%), Gaps = 8/61 (13%)

Query: 13  TQQHILPEVPPVENFPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFANPNRTFTDP 72
           TQ   L E  P  +   ++W+  +V L  E                H     P     +P
Sbjct: 226 TQDMELVETRPAGDGTFQKWASVVVPLGKEQNYTCHVY--------HEGLPEPLTLRWEP 277

Query: 73  P 73
           P
Sbjct: 278 P 278


>4C1O-A nrPDB
          Length = 727

 Score = 28.2 bits (61), Expect = 3.9,   Method: Composition-based stats.
 Identities = 11/66 (16%), Positives = 21/66 (31%), Gaps = 5/66 (7%)

Query: 57  HLHPTFANPNRTFTDPPFRIEEQGWGGFPLDI-SVFLLEKAGERKIPHDLNFLQESYEVE 115
            L      P     +  +R+       F L +  +F   K     + + L+   E Y   
Sbjct: 343 QLLEQEGKPIWVVNEGEYRMMNT----FDLTVDQLFFELKMNPWTVKNVLDLYVERYSYY 398

Query: 116 HVIQIP 121
             ++ P
Sbjct: 399 DRVRFP 404


>5HPQ-A nrPDB
          Length = 255

 Score = 27.8 bits (60), Expect = 4.0,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 17/28 (60%)

Query: 74  FRIEEQGWGGFPLDISVFLLEKAGERKI 101
           +R EE G+ GF +D++  L E  G + +
Sbjct: 38  YRTEEGGYAGFDVDMAQRLAESLGAKLV 65


>4J0Q-A nrPDB
          Length = 433

 Score = 27.4 bits (59), Expect = 6.5,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 22/70 (31%), Gaps = 11/70 (15%)

Query: 23  PVENFPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFANPNRTFTDPPFRIEEQGWG 82
           P ++ P+   S  + L   +  E+  T   K++  L      P R    P          
Sbjct: 200 PGDDTPIIIGSARMALEGKDDNEMGTTAVKKLVETLDSYIPEPVRAIDQP---------- 249

Query: 83  GFPLDISVFL 92
            F + I    
Sbjct: 250 -FLMPIEDVF 258


>1ZS8-A nrPDB
          Length = 274

 Score = 26.6 bits (57), Expect = 9.2,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 19/39 (48%)

Query: 4   TVKRTIRIKTQQHILPEVPPVENFPVRQWSIEIVLLDDE 42
           T KR  +  TQ   LP+  P  +   ++W+  +V   +E
Sbjct: 215 TWKRDGKNHTQDMELPDTRPAGDGTFQKWAAVVVPFGEE 253


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.306    0.130    0.358 

Lambda     K      H
   0.267   0.0405    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,956,072
Number of Sequences: 36641
Number of extensions: 410372
Number of successful extensions: 826
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 789
Number of HSP's gapped (non-prelim): 58
length of query: 244
length of database: 10,336,785
effective HSP length: 94
effective length of query: 150
effective length of database: 6,892,531
effective search space: 1033879650
effective search space used: 1033879650
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.5 bits)
S2: 58 (27.0 bits)