BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P35052 (558 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4AD7-A nrPDB 1044 0.0 3ODN-A nrPDB 218 5e-57 1XKH-A nrPDB 32 0.85 2W78-A nrPDB 32 1.0 6MCK-A nrPDB 30 3.1 3FII-A nrPDB 30 3.1 4IAO-A nrPDB 30 3.4 5C18-A nrPDB 30 3.9 3HU1-A nrPDB 29 4.3 5YFP-F nrPDB 29 5.1 3DWC-A nrPDB 29 6.3 >4AD7-A nrPDB Length = 528 Score = 1044 bits (2699), Expect = 0.0, Method: Compositional matrix adjust. Identities = 506/506 (100%), Positives = 506/506 (100%) Query: 24 DPASKSRSCGEVRQIYGAKGFSLSDVPQAEISGEHLRICPQGYTCCTSEMEENLANRSHA 83 DPASKSRSCGEVRQIYGAKGFSLSDVPQAEISGEHLRICPQGYTCCTSEMEENLANRSHA Sbjct: 23 DPASKSRSCGEVRQIYGAKGFSLSDVPQAEISGEHLRICPQGYTCCTSEMEENLANRSHA 82 Query: 84 ELETALRDSSRVLQAMLATQLRSFDDHFQHLLNDSERTLQATFPGAFGELYTQNARAFRD 143 ELETALRDSSRVLQAMLATQLRSFDDHFQHLLNDSERTLQATFPGAFGELYTQNARAFRD Sbjct: 83 ELETALRDSSRVLQAMLATQLRSFDDHFQHLLNDSERTLQATFPGAFGELYTQNARAFRD 142 Query: 144 LYSELRLYYRGANLHLEETLAEFWARLLERLFKQLHPQLLLPDDYLDCLGKQAEALRPFG 203 LYSELRLYYRGANLHLEETLAEFWARLLERLFKQLHPQLLLPDDYLDCLGKQAEALRPFG Sbjct: 143 LYSELRLYYRGANLHLEETLAEFWARLLERLFKQLHPQLLLPDDYLDCLGKQAEALRPFG 202 Query: 204 EAPRELRLRATRAFVAARSFVQGLGVASDVVRKVAQVPLGPECSRAVMKLVYCAHCLGVP 263 EAPRELRLRATRAFVAARSFVQGLGVASDVVRKVAQVPLGPECSRAVMKLVYCAHCLGVP Sbjct: 203 EAPRELRLRATRAFVAARSFVQGLGVASDVVRKVAQVPLGPECSRAVMKLVYCAHCLGVP 262 Query: 264 GARPCPDYCRNVLKGCLANQADLDAEWRNLLDSMVLITDKFWGTSGVESVIGSVHTWLAE 323 GARPCPDYCRNVLKGCLANQADLDAEWRNLLDSMVLITDKFWGTSGVESVIGSVHTWLAE Sbjct: 263 GARPCPDYCRNVLKGCLANQADLDAEWRNLLDSMVLITDKFWGTSGVESVIGSVHTWLAE 322 Query: 324 AINALQDNRDTLTAKVIQGCGNPKVNPQGPGPEEKRRRGKLAPRERPPSGTLEKLVSEAK 383 AINALQDNRDTLTAKVIQGCGNPKVNPQGPGPEEKRRRGKLAPRERPPSGTLEKLVSEAK Sbjct: 323 AINALQDNRDTLTAKVIQGCGNPKVNPQGPGPEEKRRRGKLAPRERPPSGTLEKLVSEAK 382 Query: 384 AQLRDVQDFWISLPGTLCSEKMALSTASDDRCWNGMARGRYLPEVMGDGLANQINNPEVE 443 AQLRDVQDFWISLPGTLCSEKMALSTASDDRCWNGMARGRYLPEVMGDGLANQINNPEVE Sbjct: 383 AQLRDVQDFWISLPGTLCSEKMALSTASDDRCWNGMARGRYLPEVMGDGLANQINNPEVE 442 Query: 444 VDITKPDMTIRQQIMQLKIMTNRLRSAYNGNDVDFQDASDDGSGSGSGDGCLDDLCSRKV 503 VDITKPDMTIRQQIMQLKIMTNRLRSAYNGNDVDFQDASDDGSGSGSGDGCLDDLCSRKV Sbjct: 443 VDITKPDMTIRQQIMQLKIMTNRLRSAYNGNDVDFQDASDDGSGSGSGDGCLDDLCSRKV 502 Query: 504 SRKSSSSRTPLTHALPGLSEQEGQKT 529 SRKSSSSRTPLTHALPGLSEQEGQKT Sbjct: 503 SRKSSSSRTPLTHALPGLSEQEGQKT 528 >3ODN-A nrPDB Length = 506 Score = 218 bits (555), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 106/322 (32%), Positives = 176/322 (54%), Gaps = 3/322 (0%) Query: 29 SRSCGEVRQIYGAKGFSLSDVPQAEISGEHLRIC--PQGYTCCTSEMEENLANRSHAELE 86 S C V I+ A+G ++PQ + LR C P TCCT ME +A +S +LE Sbjct: 4 SPECSAVTHIFQARGIDAIEIPQKPSNERVLRYCESPSVGTCCTYNMETRMAMQSRQQLE 63 Query: 87 TALRDSSRVLQAMLATQLRSFDDHFQHLLNDSERTLQATFPGAFGELYTQNARAFRDLYS 146 +D + +L ++ F D F LL +S + F +G +Y +N+ F DL+ Sbjct: 64 GHTKDQISRMSGILGSKATKFKDIFTALLKESRTQFNSMFIRTYGVIYERNSYVFSDLFK 123 Query: 147 ELRLYYRGANLHLEETLAEFWARLLERLFKQLHPQLLLPDDYLDCLGKQAEALRPFGEAP 206 EL Y+ + L E + +F+ L +++F L+ Q ++Y+ C+ + + L+PFG+ P Sbjct: 124 ELETYFANGRVDLLEVMDKFFNTLYQKMFTVLNTQYTFDENYMRCVSEHMKELKPFGDVP 183 Query: 207 RELRLRATRAFVAARSFVQGLGVASDVVRKVAQVPLGPECSRAVMKLVYCAHCLGVPGAR 266 +L ++ R+FVA R++ Q L AS+V +KV V L +C+ A+ K+ +C C G + Sbjct: 184 DKLSVQIKRSFVATRTYGQALTTASEVAKKVLNVRLNADCTGALTKMQHCGACKGYT-EK 242 Query: 267 PCPDYCRNVLKGCLANQADLDAEWRNLLDSMVLITDKFWGTSGVESVIGSVHTWLAEAIN 326 PC +YC NV+KGCL Q + D+EW N +M + ++ G+ + V+ ++ ++EAI Sbjct: 243 PCTNYCVNVIKGCLHYQHEFDSEWENFAMAMDKVAERLLGSFNIVMVVEPLNIKISEAIM 302 Query: 327 ALQDNRDTLTAKVIQGCGNPKV 348 QD+ +T +V QGCG PK+ Sbjct: 303 NFQDSGQDITNRVFQGCGRPKL 324 Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 7/109 (6%) Query: 375 LEKLVSEAKAQLRDVQDFWISLPGTLCS-EKMALSTASDDRCWNGMARGRYLPEVMGDGL 433 L+++V + + +++D + FW +LP ++CS E +A S+ D CWNG RY+ + + Sbjct: 401 LDRIVRDIRQRVKDYKKFWSNLPHSVCSNEDIASSSDVDGMCWNGHTIDRYMHSITTE-- 458 Query: 434 ANQINNPEVEVD--ITKPDMTIRQQIMQLKIMTNRLRSAYNGNDVDFQD 480 +NPE + TK + Q+ LK LR+AYNG DV++ + Sbjct: 459 --HGSNPEFTGNPASTKQTAQMASQLSHLKNAIVHLRNAYNGQDVEWSE 505 >1XKH-A nrPDB Length = 687 Score = 31.6 bits (70), Expect = 0.85, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 44/118 (37%), Gaps = 7/118 (5%) Query: 353 PGPEEKRRRGKLAPRERPPSGTLEKLVSEAKAQLRDVQDFWISLPGTLCSEKMALSTASD 412 PG R L PRE P S T+ + L ++ D PG + +S Sbjct: 21 PGTIATATRLVLTPRETPQSITVVTRQNMDDFGLNNIDDVMRHTPG------ITVSAYDT 74 Query: 413 DRCWNGMARGRYLPEVMGDGLANQINNPEVEVDITKPDMTIRQQIMQLKIMTNRLRSA 470 DR N ARG + DG+ + N T DM I ++ LK T L A Sbjct: 75 DRN-NYYARGFSINNFQYDGIPSTARNVGYSAGNTLSDMAIYDRVEVLKGATGLLTGA 131 >2W78-A nrPDB Length = 772 Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 44/118 (37%), Gaps = 7/118 (5%) Query: 353 PGPEEKRRRGKLAPRERPPSGTLEKLVSEAKAQLRDVQDFWISLPGTLCSEKMALSTASD 412 PG R L PRE P S T+ + L ++ D PG + +S Sbjct: 106 PGTIATATRLVLTPRETPQSITVVTRQNMDDFGLNNIDDVMRHTPG------ITVSAYDT 159 Query: 413 DRCWNGMARGRYLPEVMGDGLANQINNPEVEVDITKPDMTIRQQIMQLKIMTNRLRSA 470 DR N ARG + DG+ + N T DM I ++ LK T L A Sbjct: 160 DRN-NYYARGFSINNFQYDGIPSTARNVGYSAGNTLSDMAIYDRVEVLKGATGLLTGA 216 >6MCK-A nrPDB Length = 606 Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 7/58 (12%) Query: 443 EVDITKPDMTIRQQIMQLKIMTNRLRSAYNGNDVDFQDASDDGSGSGSGDGCLDDLCS 500 EVDI PD T R +I+Q+ +L +DVD + +++ G D L LCS Sbjct: 158 EVDIGIPDATGRLEILQIHTKNMKL-----ADDVDLEQVANETHGHVGAD--LAALCS 208 >3FII-A nrPDB Length = 427 Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust. Identities = 32/122 (26%), Positives = 47/122 (38%), Gaps = 20/122 (16%) Query: 38 IYGAKGFSLSD---VPQAEIS--------GEHLRICPQGYTCCTSEMEENLANRSHAELE 86 +YGA+G + + V QA + E L Q TS M+E + N A E Sbjct: 236 LYGARGVTYKETIKVKQAPLMIAEKPIRLEEFLTFGGQDLNIITSAMKEKIYNNLLANYE 295 Query: 87 TALRDSSRVLQAMLATQLRSFDDHFQHLLNDSERTLQATFPGAFGELYTQNARAFRDLYS 146 SRV A + + D+FQ + L G+ YT N F ++Y Sbjct: 296 KIATRLSRVNSAPPEYDINEYKDYFQW-----KYGLDKNADGS----YTVNENKFNEIYK 346 Query: 147 EL 148 +L Sbjct: 347 KL 348 >4IAO-A nrPDB Length = 492 Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust. Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 7/94 (7%) Query: 60 RICPQGYTCCTSEMEENLANRSHAELETALRDSSRVLQAMLATQLRSFD----DHFQHLL 115 R+ G + +E+ LA + L ++D R + +L T+LR + DHF L Sbjct: 125 RVQDLGSAISVTNVEDPLAKKQTVRL---IKDLQRAINKVLCTRLRLSNFFTIDHFIQKL 181 Query: 116 NDSERTLQATFPGAFGELYTQNARAFRDLYSELR 149 + + + L T G L + R+ YS+++ Sbjct: 182 HTARKILVLTGAGVSTSLGIPDFRSSEGFYSKIK 215 >5C18-A nrPDB Length = 785 Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 7/58 (12%) Query: 443 EVDITKPDMTIRQQIMQLKIMTNRLRSAYNGNDVDFQDASDDGSGSGSGDGCLDDLCS 500 EVDI PD T R +I+Q+ +L +DVD + +++ G D L LCS Sbjct: 365 EVDIGIPDATGRLEILQIHTKNMKL-----ADDVDLEQVANETHGHVGAD--LAALCS 415 >3HU1-A nrPDB Length = 489 Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 7/58 (12%) Query: 443 EVDITKPDMTIRQQIMQLKIMTNRLRSAYNGNDVDFQDASDDGSGSGSGDGCLDDLCS 500 EVDI PD T R +I+Q+ +L +DVD + +++ G D L LCS Sbjct: 366 EVDIGIPDATGRLEILQIHTKNMKL-----ADDVDLEQVANETHGHVGAD--LAALCS 416 >5YFP-F nrPDB Length = 910 Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust. Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 4/74 (5%) Query: 46 LSDVPQAEISGEHLRICPQGYTCCTSEMEENLANRSHAELETALRDSSRVLQAMLATQLR 105 LS ++ E I + + C + EN +E + + + + LR Sbjct: 440 LSYFIDEKLKTEEDMIKLKDFLCIYVAILENFK----LNIEPLYKILVSIFEKFCSVSLR 495 Query: 106 SFDDHFQHLLNDSE 119 +FDD FQ LLND + Sbjct: 496 AFDDEFQILLNDDD 509 >3DWC-A nrPDB Length = 505 Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust. Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 8/50 (16%) Query: 310 VESVIGSVHTWLAEAINALQDNRDTLTAKVIQGCGNPKVNPQGPGPEEKR 359 ++ + G+V +WL E + +Q+ + L V++ P+GP P K+ Sbjct: 171 LDEIFGNVRSWLPELLKEVQEKQKALGETVLE--------PKGPFPVSKQ 212 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4AD7-A nrPDB 907 0.0 3ODN-A nrPDB 556 e-159 Sequences not found previously or not previously below threshold: 6IQ5-A nrPDB 36 0.046 2EPK-X nrPDB 33 0.30 1WRJ-A nrPDB 31 1.1 3OK8-A nrPDB 29 4.1 3HAI-A nrPDB 29 4.7 2A2C-A nrPDB 29 5.3 CONVERGED! >4AD7-A nrPDB Length = 528 Score = 907 bits (2345), Expect = 0.0, Method: Composition-based stats. Identities = 506/506 (100%), Positives = 506/506 (100%) Query: 24 DPASKSRSCGEVRQIYGAKGFSLSDVPQAEISGEHLRICPQGYTCCTSEMEENLANRSHA 83 DPASKSRSCGEVRQIYGAKGFSLSDVPQAEISGEHLRICPQGYTCCTSEMEENLANRSHA Sbjct: 23 DPASKSRSCGEVRQIYGAKGFSLSDVPQAEISGEHLRICPQGYTCCTSEMEENLANRSHA 82 Query: 84 ELETALRDSSRVLQAMLATQLRSFDDHFQHLLNDSERTLQATFPGAFGELYTQNARAFRD 143 ELETALRDSSRVLQAMLATQLRSFDDHFQHLLNDSERTLQATFPGAFGELYTQNARAFRD Sbjct: 83 ELETALRDSSRVLQAMLATQLRSFDDHFQHLLNDSERTLQATFPGAFGELYTQNARAFRD 142 Query: 144 LYSELRLYYRGANLHLEETLAEFWARLLERLFKQLHPQLLLPDDYLDCLGKQAEALRPFG 203 LYSELRLYYRGANLHLEETLAEFWARLLERLFKQLHPQLLLPDDYLDCLGKQAEALRPFG Sbjct: 143 LYSELRLYYRGANLHLEETLAEFWARLLERLFKQLHPQLLLPDDYLDCLGKQAEALRPFG 202 Query: 204 EAPRELRLRATRAFVAARSFVQGLGVASDVVRKVAQVPLGPECSRAVMKLVYCAHCLGVP 263 EAPRELRLRATRAFVAARSFVQGLGVASDVVRKVAQVPLGPECSRAVMKLVYCAHCLGVP Sbjct: 203 EAPRELRLRATRAFVAARSFVQGLGVASDVVRKVAQVPLGPECSRAVMKLVYCAHCLGVP 262 Query: 264 GARPCPDYCRNVLKGCLANQADLDAEWRNLLDSMVLITDKFWGTSGVESVIGSVHTWLAE 323 GARPCPDYCRNVLKGCLANQADLDAEWRNLLDSMVLITDKFWGTSGVESVIGSVHTWLAE Sbjct: 263 GARPCPDYCRNVLKGCLANQADLDAEWRNLLDSMVLITDKFWGTSGVESVIGSVHTWLAE 322 Query: 324 AINALQDNRDTLTAKVIQGCGNPKVNPQGPGPEEKRRRGKLAPRERPPSGTLEKLVSEAK 383 AINALQDNRDTLTAKVIQGCGNPKVNPQGPGPEEKRRRGKLAPRERPPSGTLEKLVSEAK Sbjct: 323 AINALQDNRDTLTAKVIQGCGNPKVNPQGPGPEEKRRRGKLAPRERPPSGTLEKLVSEAK 382 Query: 384 AQLRDVQDFWISLPGTLCSEKMALSTASDDRCWNGMARGRYLPEVMGDGLANQINNPEVE 443 AQLRDVQDFWISLPGTLCSEKMALSTASDDRCWNGMARGRYLPEVMGDGLANQINNPEVE Sbjct: 383 AQLRDVQDFWISLPGTLCSEKMALSTASDDRCWNGMARGRYLPEVMGDGLANQINNPEVE 442 Query: 444 VDITKPDMTIRQQIMQLKIMTNRLRSAYNGNDVDFQDASDDGSGSGSGDGCLDDLCSRKV 503 VDITKPDMTIRQQIMQLKIMTNRLRSAYNGNDVDFQDASDDGSGSGSGDGCLDDLCSRKV Sbjct: 443 VDITKPDMTIRQQIMQLKIMTNRLRSAYNGNDVDFQDASDDGSGSGSGDGCLDDLCSRKV 502 Query: 504 SRKSSSSRTPLTHALPGLSEQEGQKT 529 SRKSSSSRTPLTHALPGLSEQEGQKT Sbjct: 503 SRKSSSSRTPLTHALPGLSEQEGQKT 528 >3ODN-A nrPDB Length = 506 Score = 556 bits (1434), Expect = e-159, Method: Composition-based stats. Identities = 110/340 (32%), Positives = 181/340 (53%), Gaps = 11/340 (3%) Query: 29 SRSCGEVRQIYGAKGFSLSDVPQAEISGEHLRIC--PQGYTCCTSEMEENLANRSHAELE 86 S C V I+ A+G ++PQ + LR C P TCCT ME +A +S +LE Sbjct: 4 SPECSAVTHIFQARGIDAIEIPQKPSNERVLRYCESPSVGTCCTYNMETRMAMQSRQQLE 63 Query: 87 TALRDSSRVLQAMLATQLRSFDDHFQHLLNDSERTLQATFPGAFGELYTQNARAFRDLYS 146 +D + +L ++ F D F LL +S + F +G +Y +N+ F DL+ Sbjct: 64 GHTKDQISRMSGILGSKATKFKDIFTALLKESRTQFNSMFIRTYGVIYERNSYVFSDLFK 123 Query: 147 ELRLYYRGANLHLEETLAEFWARLLERLFKQLHPQLLLPDDYLDCLGKQAEALRPFGEAP 206 EL Y+ + L E + +F+ L +++F L+ Q ++Y+ C+ + + L+PFG+ P Sbjct: 124 ELETYFANGRVDLLEVMDKFFNTLYQKMFTVLNTQYTFDENYMRCVSEHMKELKPFGDVP 183 Query: 207 RELRLRATRAFVAARSFVQGLGVASDVVRKVAQVPLGPECSRAVMKLVYCAHCLGVPGAR 266 +L ++ R+FVA R++ Q L AS+V +KV V L +C+ A+ K+ +C C G + Sbjct: 184 DKLSVQIKRSFVATRTYGQALTTASEVAKKVLNVRLNADCTGALTKMQHCGACKGYT-EK 242 Query: 267 PCPDYCRNVLKGCLANQADLDAEWRNLLDSMVLITDKFWGTSGVESVIGSVHTWLAEAIN 326 PC +YC NV+KGCL Q + D+EW N +M + ++ G+ + V+ ++ ++EAI Sbjct: 243 PCTNYCVNVIKGCLHYQHEFDSEWENFAMAMDKVAERLLGSFNIVMVVEPLNIKISEAIM 302 Query: 327 ALQDNRDTLTAKVIQGCGNPKVNPQGPGPEEKRRRGKLAP 366 QD+ +T +V QGCG PK+ +KR R P Sbjct: 303 NFQDSGQDITNRVFQGCGRPKL--------KKRERRAAEP 334 Score = 173 bits (438), Expect = 2e-43, Method: Composition-based stats. Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 7/109 (6%) Query: 375 LEKLVSEAKAQLRDVQDFWISLPGTLCS-EKMALSTASDDRCWNGMARGRYLPEVMGDGL 433 L+++V + + +++D + FW +LP ++CS E +A S+ D CWNG RY+ + + Sbjct: 401 LDRIVRDIRQRVKDYKKFWSNLPHSVCSNEDIASSSDVDGMCWNGHTIDRYMHSITTE-- 458 Query: 434 ANQINNPEVEVD--ITKPDMTIRQQIMQLKIMTNRLRSAYNGNDVDFQD 480 +NPE + TK + Q+ LK LR+AYNG DV++ + Sbjct: 459 --HGSNPEFTGNPASTKQTAQMASQLSHLKNAIVHLRNAYNGQDVEWSE 505 >6IQ5-A nrPDB Length = 463 Score = 35.8 bits (81), Expect = 0.046, Method: Composition-based stats. Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 14/138 (10%) Query: 80 RSHAELETALRDSSRVLQAML--ATQLRSFDDHFQHLLNDSERTLQATFPGAFGELYTQN 137 RS LE + +R L A+L + +F D + + A FG Y+ + Sbjct: 94 RSRQVLEGHVLSEARELVALLVRGSADGAFLDPRPLTVVAVANVMSAV---CFGCRYSHD 150 Query: 138 ARAFRDLYSELRLYYR----GANLHLEETLAEFWA--RLLERLFKQLHPQLLLPDDYLDC 191 FR+L S + R G+ + + L F R + R F+QL+ + LD Sbjct: 151 DPEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRN--FSNFILDK 208 Query: 192 LGKQAEALRPFGEAPREL 209 + E+LRP G APR++ Sbjct: 209 FLRHCESLRP-GAAPRDM 225 >2EPK-X nrPDB Length = 627 Score = 33.1 bits (74), Expect = 0.30, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 53/126 (42%), Gaps = 3/126 (2%) Query: 91 DSSRVLQAMLATQLRSFDDHFQHLLNDSERTLQATFPGAFGELYTQNARAFRDLYSELRL 150 ++ L A+LA ++ + N + L A F +LY Q F D +S R Sbjct: 490 ETQAQLNALLALKISITSGIQKAYRNGDKEHLSALAEKDFPQLY-QMVEDFSDQFS--RQ 546 Query: 151 YYRGANLHLEETLAEFWARLLERLFKQLHPQLLLPDDYLDCLGKQAEALRPFGEAPRELR 210 + + + +T+ + LL+R+ + +DC+ + + + PF + ++ Sbjct: 547 WQQENKIFGLDTIDIRFGGLLKRIKRAQERLEQFISGQIDCVEELEQEILPFNDFYKDQG 606 Query: 211 LRATRA 216 L AT A Sbjct: 607 LTATTA 612 >1WRJ-A nrPDB Length = 156 Score = 31.2 bits (69), Expect = 1.1, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Query: 141 FRDLYSELRLYYRGANLHLEETLA-EFWARLLERLFKQL 178 F D + +L LY+ G + L E + + + R+FK++ Sbjct: 42 FTDFFYKLDLYFEGKKVDLTEPVDFKPFNEFRIRVFKEV 80 >3OK8-A nrPDB Length = 222 Score = 29.3 bits (64), Expect = 4.1, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 52/133 (39%), Gaps = 8/133 (6%) Query: 110 HFQHLLNDSERTLQATFPGAFGELYTQNARAFRDLYSELRLYYRGANLHLEETLAEFWAR 169 +F + E+ LQ++ GE+ Q + R L S+L + + + L + + + Sbjct: 53 YFSAIQKIGEQALQSSTSQILGEILVQMSDTQRHLNSDLEVVVQTFHGDLLQHMEK--NT 110 Query: 170 LLERLFKQLHPQLLLPD------DYLDCLGKQAEALRPFGEAPRELRLRATRAFVAARSF 223 L+ F + Q + + C+ + R + RE++ R ++F Sbjct: 111 KLDMQFIKDSCQHYEIEYRHRAANLEKCMSELWRMERKRDKNAREMKESVNRLHAQMQAF 170 Query: 224 VQGLGVASDVVRK 236 V A+++ K Sbjct: 171 VSESKRAAELEEK 183 >3HAI-A nrPDB Length = 308 Score = 29.3 bits (64), Expect = 4.7, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 152 YRGANLHLEETLAEFWAR-LLERLFKQLHPQLLLPDDYLDCLGKQAEALRPFGE 204 Y A+L EET FW +R K++ L +D ++C+ ++A+ + +G+ Sbjct: 5 YDEASLAPEETTDSFWEVGNYKRTVKRIDDGHRLCNDLMNCVQERAKIEKAYGQ 58 >2A2C-A nrPDB Length = 478 Score = 29.3 bits (64), Expect = 5.3, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 3/47 (6%) Query: 157 LHLEETLAEFWARLLERLFKQ---LHPQLLLPDDYLDCLGKQAEALR 200 L LEE A+ L E L LHP+ P++ CLG E LR Sbjct: 286 LRLEEVQAKLGISLEEMLLVTEDALHPEPYNPEEICRCLGISLEELR 332 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.315 0.133 0.381 Lambda K H 0.267 0.0409 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 21,448,856 Number of Sequences: 36641 Number of extensions: 863609 Number of successful extensions: 2259 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 18 Number of HSP's that attempted gapping in prelim test: 2235 Number of HSP's gapped (non-prelim): 29 length of query: 558 length of database: 10,336,785 effective HSP length: 102 effective length of query: 456 effective length of database: 6,599,403 effective search space: 3009327768 effective search space used: 3009327768 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 62 (28.5 bits)