BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P33307 (960 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1WA5-C nrPDB 1939 0.0 5MU7-A nrPDB 32 1.1 3MC6-C nrPDB 32 1.7 6I9E-A nrPDB 32 1.9 2X19-B nrPDB 32 2.0 3RHF-A nrPDB 31 3.3 1IAY-A nrPDB 30 4.9 2UVV-A nrPDB 30 5.1 4Q6R-A nrPDB 30 6.6 5UIY-A nrPDB 30 7.2 >1WA5-C nrPDB Length = 960 Score = 1939 bits (5022), Expect = 0.0, Method: Compositional matrix adjust. Identities = 960/960 (100%), Positives = 960/960 (100%) Query: 1 MSDLETVAKFLAESVIASTAKTSERNLRQLETQDGFGLTLLHVIASTNLPLSTRLAGALF 60 MSDLETVAKFLAESVIASTAKTSERNLRQLETQDGFGLTLLHVIASTNLPLSTRLAGALF Sbjct: 1 MSDLETVAKFLAESVIASTAKTSERNLRQLETQDGFGLTLLHVIASTNLPLSTRLAGALF 60 Query: 61 FKNFIKRKWVDENGNHLLPANNVELIKKEIVPLMISLPNNLQVQIGEAISSIADSDFPDR 120 FKNFIKRKWVDENGNHLLPANNVELIKKEIVPLMISLPNNLQVQIGEAISSIADSDFPDR Sbjct: 61 FKNFIKRKWVDENGNHLLPANNVELIKKEIVPLMISLPNNLQVQIGEAISSIADSDFPDR 120 Query: 121 WPTLLSDLASRLSNDDMVTNKGVLTVAHSIFKRWRPLFRSDELFLEIKLVLDVFTAPFLN 180 WPTLLSDLASRLSNDDMVTNKGVLTVAHSIFKRWRPLFRSDELFLEIKLVLDVFTAPFLN Sbjct: 121 WPTLLSDLASRLSNDDMVTNKGVLTVAHSIFKRWRPLFRSDELFLEIKLVLDVFTAPFLN 180 Query: 181 LLKTVDEQITANENNKASLNILFDVLLVLIKLYYDFNCQDIPEFFEDNIQVGMGIFHKYL 240 LLKTVDEQITANENNKASLNILFDVLLVLIKLYYDFNCQDIPEFFEDNIQVGMGIFHKYL Sbjct: 181 LLKTVDEQITANENNKASLNILFDVLLVLIKLYYDFNCQDIPEFFEDNIQVGMGIFHKYL 240 Query: 241 SYSNPLLEDPDETEHASVLIKVKSSIQELVQLYTTRYEDVFGPMINEFIQITWNLLTSIS 300 SYSNPLLEDPDETEHASVLIKVKSSIQELVQLYTTRYEDVFGPMINEFIQITWNLLTSIS Sbjct: 241 SYSNPLLEDPDETEHASVLIKVKSSIQELVQLYTTRYEDVFGPMINEFIQITWNLLTSIS 300 Query: 301 NQPKYDILVSKSLSFLTAVTRIPKYFEIFNNESAMNNITEQIILPNVTLREEDVELFEDD 360 NQPKYDILVSKSLSFLTAVTRIPKYFEIFNNESAMNNITEQIILPNVTLREEDVELFEDD Sbjct: 301 NQPKYDILVSKSLSFLTAVTRIPKYFEIFNNESAMNNITEQIILPNVTLREEDVELFEDD 360 Query: 361 PIEYIRRDLEGSDTDTRRRACTDFLKELKEKNEVLVTNIFLAHMKGFVDQYMSDPSKNWK 420 PIEYIRRDLEGSDTDTRRRACTDFLKELKEKNEVLVTNIFLAHMKGFVDQYMSDPSKNWK Sbjct: 361 PIEYIRRDLEGSDTDTRRRACTDFLKELKEKNEVLVTNIFLAHMKGFVDQYMSDPSKNWK 420 Query: 421 FKDLYIYLFTALAINGNITNAGVSSTNNLLNVVDFFTKEIAPDLTSNNIPHIILRVDAIK 480 FKDLYIYLFTALAINGNITNAGVSSTNNLLNVVDFFTKEIAPDLTSNNIPHIILRVDAIK Sbjct: 421 FKDLYIYLFTALAINGNITNAGVSSTNNLLNVVDFFTKEIAPDLTSNNIPHIILRVDAIK 480 Query: 481 YIYTFRNQLTKAQLIELMPILATFLQTDEYVVYTYAAITIEKILTIRESNTSPAFIFHKE 540 YIYTFRNQLTKAQLIELMPILATFLQTDEYVVYTYAAITIEKILTIRESNTSPAFIFHKE Sbjct: 481 YIYTFRNQLTKAQLIELMPILATFLQTDEYVVYTYAAITIEKILTIRESNTSPAFIFHKE 540 Query: 541 DISNSTEILLKNLIALILKHGSSPEKLAENEFLMRSIFRVLQTSEDSIQPLFPQLLAQFI 600 DISNSTEILLKNLIALILKHGSSPEKLAENEFLMRSIFRVLQTSEDSIQPLFPQLLAQFI Sbjct: 541 DISNSTEILLKNLIALILKHGSSPEKLAENEFLMRSIFRVLQTSEDSIQPLFPQLLAQFI 600 Query: 601 EIVTIMAKNPSNPRFTHYTFESIGAILNYTQRQNLPLLVDSMMPTFLTVFSEDIQEFIPY 660 EIVTIMAKNPSNPRFTHYTFESIGAILNYTQRQNLPLLVDSMMPTFLTVFSEDIQEFIPY Sbjct: 601 EIVTIMAKNPSNPRFTHYTFESIGAILNYTQRQNLPLLVDSMMPTFLTVFSEDIQEFIPY 660 Query: 661 VFQIIAFVVEQSATIPESIKPLAQPLLAPNVWELKGNIPAVTRLLKSFIKTDSSIFPDLV 720 VFQIIAFVVEQSATIPESIKPLAQPLLAPNVWELKGNIPAVTRLLKSFIKTDSSIFPDLV Sbjct: 661 VFQIIAFVVEQSATIPESIKPLAQPLLAPNVWELKGNIPAVTRLLKSFIKTDSSIFPDLV 720 Query: 721 PVLGIFQRLIASKAYEVHGFDLLEHIMLLIDMNRLRPYIKQIAVLLLQRLQNSKTERYVK 780 PVLGIFQRLIASKAYEVHGFDLLEHIMLLIDMNRLRPYIKQIAVLLLQRLQNSKTERYVK Sbjct: 721 PVLGIFQRLIASKAYEVHGFDLLEHIMLLIDMNRLRPYIKQIAVLLLQRLQNSKTERYVK 780 Query: 781 KLTVFFGLISNKLGSDFLIHFIDEVQDGLFQQIWGNFIITTLPTIGNLLDRKIALIGVLN 840 KLTVFFGLISNKLGSDFLIHFIDEVQDGLFQQIWGNFIITTLPTIGNLLDRKIALIGVLN Sbjct: 781 KLTVFFGLISNKLGSDFLIHFIDEVQDGLFQQIWGNFIITTLPTIGNLLDRKIALIGVLN 840 Query: 841 MVINGQFFQSKYPTLISSTMNSIIETASSQSIANLKNDYVDLDNLEEISTFGSHFSKLVS 900 MVINGQFFQSKYPTLISSTMNSIIETASSQSIANLKNDYVDLDNLEEISTFGSHFSKLVS Sbjct: 841 MVINGQFFQSKYPTLISSTMNSIIETASSQSIANLKNDYVDLDNLEEISTFGSHFSKLVS 900 Query: 901 ISEKPFDPLPEIDVNNGVRLYVAEALNKYNAISGNTFLNTILPQLTQENQVKLNQLLVGN 960 ISEKPFDPLPEIDVNNGVRLYVAEALNKYNAISGNTFLNTILPQLTQENQVKLNQLLVGN Sbjct: 901 ISEKPFDPLPEIDVNNGVRLYVAEALNKYNAISGNTFLNTILPQLTQENQVKLNQLLVGN 960 >5MU7-A nrPDB Length = 373 Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust. Identities = 48/168 (28%), Positives = 73/168 (43%), Gaps = 27/168 (16%) Query: 287 EFIQITWNLLTSISNQPKY-----DIL-------VSKSLSFLTAVTRIP--------KYF 326 EFI+ + L + N+P+Y D+L V ++ S LTA+T P K+ Sbjct: 210 EFIR--KDALHNPQNKPRYLRLIFDLLEANTSTVVYEAASSLTALTNNPVAVKAAAGKFI 267 Query: 327 EIFNNESAMNNITEQIILPNVTLREEDVELFEDDPIEYIRRDLEGSDTDTRRRACTDFLK 386 E+ E A NN+ + I+L V + E DD I I R L D D RR+A L+ Sbjct: 268 ELAIKE-ADNNV-KLIVLDRVDQLRQKNEGILDDLIMEILRVLSSPDIDVRRKALEIALE 325 Query: 387 ELKEKNEVLVTNIFLAHMKGFVDQYMSDPSKNWKFKDLYIYLFTALAI 434 + KN V + L K + KN +++ L I+ A+ Sbjct: 326 MVSSKN---VEEVVLLLKKELSKTVEQEYEKNSEYRQLLIHSIHQCAV 370 >3MC6-C nrPDB Length = 497 Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust. Identities = 15/42 (35%), Positives = 21/42 (50%) Query: 611 SNPRFTHYTFESIGAILNYTQRQNLPLLVDSMMPTFLTVFSE 652 S P F H + I + Q+ LPL VDS + +F+ F E Sbjct: 213 SAPNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFME 254 >6I9E-A nrPDB Length = 409 Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust. Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%) Query: 22 TSERNLRQLETQDG--FGLTLLHVIASTNLPLSTRLA 56 SE L L TQD G+T +H + ST+LP+ R+A Sbjct: 60 ASELELYLLRTQDAEQTGMTFVHQVGSTSLPVEARVA 96 >2X19-B nrPDB Length = 963 Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust. Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 11/84 (13%) Query: 56 AGALFFKNFIKRKWVDENGNHLLPANNVELIKKEIVPLMISLPNNLQV---QIGEAISSI 112 A AL K I R W D +P + E +K ++ + + ++ ++ A++S+ Sbjct: 79 ASALHIK--ISRYWSD------IPTDQYESLKAQLFTQITRFASGSKIVLTRLCVALASL 130 Query: 113 ADSDFPDRWPTLLSDLASRLSNDD 136 A S PD WP ++D+ +D Sbjct: 131 ALSMMPDAWPCAVADMVRLFQAED 154 >3RHF-A nrPDB Length = 289 Score = 30.8 bits (68), Expect = 3.3, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%) Query: 353 DVELFEDDPIEYIRRDLEGSDTDTRRRACTDFLKELKEKNEVLVT---NIFLAHMKGFVD 409 D +ED I + + ++ + R A DF L E+ +V NI K + Sbjct: 139 DRSQYEDVLIHRVHGWADAAELERRYAAINDFESRLTEQGTTIVKVMLNISKDEQKKRLI 198 Query: 410 QYMSDPSKNWKF 421 + DPSK+WK+ Sbjct: 199 ARLDDPSKHWKY 210 >1IAY-A nrPDB Length = 428 Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust. Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 4/59 (6%) Query: 600 IEIVTIMAKNPSNPRFTHYTFESIGAILNYTQRQNLPLLVDSMMPTFLTVFSEDIQEFI 658 I++ ++ NPSNP T +++ ++L++T + N+ L+ D + TVF D +F+ Sbjct: 187 IKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAA--TVF--DTPQFV 241 >2UVV-A nrPDB Length = 358 Score = 30.0 bits (66), Expect = 5.1, Method: Compositional matrix adjust. Identities = 31/129 (24%), Positives = 53/129 (41%), Gaps = 17/129 (13%) Query: 780 KKLTVFFGLISNKLGSDFLIHF-----IDEVQDGLFQQIWGNFIITTLPTIGNLLDRKIA 834 +K+TV G+ NK+ + I + D +++ I +P IGN+ K+ Sbjct: 142 EKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLK 201 Query: 835 LIGVLNMV---------INGQFFQSKYPTLIS---STMNSIIETASSQSIANLKNDYVDL 882 +G+ +V + G ++K LIS N I T +SI + + Sbjct: 202 KLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTRVRKSIGRIVTMKRNS 261 Query: 883 DNLEEISTF 891 NLEEI + Sbjct: 262 RNLEEIKPY 270 >4Q6R-A nrPDB Length = 511 Score = 29.6 bits (65), Expect = 6.6, Method: Compositional matrix adjust. Identities = 13/42 (30%), Positives = 21/42 (50%) Query: 611 SNPRFTHYTFESIGAILNYTQRQNLPLLVDSMMPTFLTVFSE 652 S P+F H + + + + +PL VD+ + FL VF E Sbjct: 229 STPQFPHGVIDPVPEVAKLAVKYKIPLHVDACLGGFLIVFME 270 >5UIY-A nrPDB Length = 116 Score = 29.6 bits (65), Expect = 7.2, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 5/74 (6%) Query: 312 SLSFLTAVTRI--PKYFEIFNNESAMNNITEQIILPNVTLREE---DVELFEDDPIEYIR 366 S FL V++I P Y++I A+N I E++ L E D+EL + EY Sbjct: 29 SWPFLKLVSKIQVPDYYDIIKKPIALNIIREKVNKCEYKLASEFIDDIELMFSNCFEYNP 88 Query: 367 RDLEGSDTDTRRRA 380 R+ + TR +A Sbjct: 89 RNTSEAKAGTRLQA 102 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1WA5-C nrPDB 1920 0.0 Sequences not found previously or not previously below threshold: 2OT8-A nrPDB 38 0.027 5MU7-A nrPDB 36 0.089 1IAY-A nrPDB 32 1.9 6I9E-A nrPDB 31 2.2 2X19-B nrPDB 31 2.6 5UIY-A nrPDB 31 3.0 2JFN-A nrPDB 31 3.1 3QY9-A nrPDB 30 3.8 3MC6-C nrPDB 30 3.8 3RHF-A nrPDB 30 4.5 5U0S-2 nrPDB 30 4.7 4FL3-A nrPDB 30 5.1 1A81-A nrPDB 30 5.1 1M4N-A nrPDB 30 5.2 4IX8-A nrPDB 30 5.7 3A74-A nrPDB 30 7.3 4Q6R-A nrPDB 29 7.8 CONVERGED! >1WA5-C nrPDB Length = 960 Score = 1920 bits (4974), Expect = 0.0, Method: Composition-based stats. Identities = 960/960 (100%), Positives = 960/960 (100%) Query: 1 MSDLETVAKFLAESVIASTAKTSERNLRQLETQDGFGLTLLHVIASTNLPLSTRLAGALF 60 MSDLETVAKFLAESVIASTAKTSERNLRQLETQDGFGLTLLHVIASTNLPLSTRLAGALF Sbjct: 1 MSDLETVAKFLAESVIASTAKTSERNLRQLETQDGFGLTLLHVIASTNLPLSTRLAGALF 60 Query: 61 FKNFIKRKWVDENGNHLLPANNVELIKKEIVPLMISLPNNLQVQIGEAISSIADSDFPDR 120 FKNFIKRKWVDENGNHLLPANNVELIKKEIVPLMISLPNNLQVQIGEAISSIADSDFPDR Sbjct: 61 FKNFIKRKWVDENGNHLLPANNVELIKKEIVPLMISLPNNLQVQIGEAISSIADSDFPDR 120 Query: 121 WPTLLSDLASRLSNDDMVTNKGVLTVAHSIFKRWRPLFRSDELFLEIKLVLDVFTAPFLN 180 WPTLLSDLASRLSNDDMVTNKGVLTVAHSIFKRWRPLFRSDELFLEIKLVLDVFTAPFLN Sbjct: 121 WPTLLSDLASRLSNDDMVTNKGVLTVAHSIFKRWRPLFRSDELFLEIKLVLDVFTAPFLN 180 Query: 181 LLKTVDEQITANENNKASLNILFDVLLVLIKLYYDFNCQDIPEFFEDNIQVGMGIFHKYL 240 LLKTVDEQITANENNKASLNILFDVLLVLIKLYYDFNCQDIPEFFEDNIQVGMGIFHKYL Sbjct: 181 LLKTVDEQITANENNKASLNILFDVLLVLIKLYYDFNCQDIPEFFEDNIQVGMGIFHKYL 240 Query: 241 SYSNPLLEDPDETEHASVLIKVKSSIQELVQLYTTRYEDVFGPMINEFIQITWNLLTSIS 300 SYSNPLLEDPDETEHASVLIKVKSSIQELVQLYTTRYEDVFGPMINEFIQITWNLLTSIS Sbjct: 241 SYSNPLLEDPDETEHASVLIKVKSSIQELVQLYTTRYEDVFGPMINEFIQITWNLLTSIS 300 Query: 301 NQPKYDILVSKSLSFLTAVTRIPKYFEIFNNESAMNNITEQIILPNVTLREEDVELFEDD 360 NQPKYDILVSKSLSFLTAVTRIPKYFEIFNNESAMNNITEQIILPNVTLREEDVELFEDD Sbjct: 301 NQPKYDILVSKSLSFLTAVTRIPKYFEIFNNESAMNNITEQIILPNVTLREEDVELFEDD 360 Query: 361 PIEYIRRDLEGSDTDTRRRACTDFLKELKEKNEVLVTNIFLAHMKGFVDQYMSDPSKNWK 420 PIEYIRRDLEGSDTDTRRRACTDFLKELKEKNEVLVTNIFLAHMKGFVDQYMSDPSKNWK Sbjct: 361 PIEYIRRDLEGSDTDTRRRACTDFLKELKEKNEVLVTNIFLAHMKGFVDQYMSDPSKNWK 420 Query: 421 FKDLYIYLFTALAINGNITNAGVSSTNNLLNVVDFFTKEIAPDLTSNNIPHIILRVDAIK 480 FKDLYIYLFTALAINGNITNAGVSSTNNLLNVVDFFTKEIAPDLTSNNIPHIILRVDAIK Sbjct: 421 FKDLYIYLFTALAINGNITNAGVSSTNNLLNVVDFFTKEIAPDLTSNNIPHIILRVDAIK 480 Query: 481 YIYTFRNQLTKAQLIELMPILATFLQTDEYVVYTYAAITIEKILTIRESNTSPAFIFHKE 540 YIYTFRNQLTKAQLIELMPILATFLQTDEYVVYTYAAITIEKILTIRESNTSPAFIFHKE Sbjct: 481 YIYTFRNQLTKAQLIELMPILATFLQTDEYVVYTYAAITIEKILTIRESNTSPAFIFHKE 540 Query: 541 DISNSTEILLKNLIALILKHGSSPEKLAENEFLMRSIFRVLQTSEDSIQPLFPQLLAQFI 600 DISNSTEILLKNLIALILKHGSSPEKLAENEFLMRSIFRVLQTSEDSIQPLFPQLLAQFI Sbjct: 541 DISNSTEILLKNLIALILKHGSSPEKLAENEFLMRSIFRVLQTSEDSIQPLFPQLLAQFI 600 Query: 601 EIVTIMAKNPSNPRFTHYTFESIGAILNYTQRQNLPLLVDSMMPTFLTVFSEDIQEFIPY 660 EIVTIMAKNPSNPRFTHYTFESIGAILNYTQRQNLPLLVDSMMPTFLTVFSEDIQEFIPY Sbjct: 601 EIVTIMAKNPSNPRFTHYTFESIGAILNYTQRQNLPLLVDSMMPTFLTVFSEDIQEFIPY 660 Query: 661 VFQIIAFVVEQSATIPESIKPLAQPLLAPNVWELKGNIPAVTRLLKSFIKTDSSIFPDLV 720 VFQIIAFVVEQSATIPESIKPLAQPLLAPNVWELKGNIPAVTRLLKSFIKTDSSIFPDLV Sbjct: 661 VFQIIAFVVEQSATIPESIKPLAQPLLAPNVWELKGNIPAVTRLLKSFIKTDSSIFPDLV 720 Query: 721 PVLGIFQRLIASKAYEVHGFDLLEHIMLLIDMNRLRPYIKQIAVLLLQRLQNSKTERYVK 780 PVLGIFQRLIASKAYEVHGFDLLEHIMLLIDMNRLRPYIKQIAVLLLQRLQNSKTERYVK Sbjct: 721 PVLGIFQRLIASKAYEVHGFDLLEHIMLLIDMNRLRPYIKQIAVLLLQRLQNSKTERYVK 780 Query: 781 KLTVFFGLISNKLGSDFLIHFIDEVQDGLFQQIWGNFIITTLPTIGNLLDRKIALIGVLN 840 KLTVFFGLISNKLGSDFLIHFIDEVQDGLFQQIWGNFIITTLPTIGNLLDRKIALIGVLN Sbjct: 781 KLTVFFGLISNKLGSDFLIHFIDEVQDGLFQQIWGNFIITTLPTIGNLLDRKIALIGVLN 840 Query: 841 MVINGQFFQSKYPTLISSTMNSIIETASSQSIANLKNDYVDLDNLEEISTFGSHFSKLVS 900 MVINGQFFQSKYPTLISSTMNSIIETASSQSIANLKNDYVDLDNLEEISTFGSHFSKLVS Sbjct: 841 MVINGQFFQSKYPTLISSTMNSIIETASSQSIANLKNDYVDLDNLEEISTFGSHFSKLVS 900 Query: 901 ISEKPFDPLPEIDVNNGVRLYVAEALNKYNAISGNTFLNTILPQLTQENQVKLNQLLVGN 960 ISEKPFDPLPEIDVNNGVRLYVAEALNKYNAISGNTFLNTILPQLTQENQVKLNQLLVGN Sbjct: 901 ISEKPFDPLPEIDVNNGVRLYVAEALNKYNAISGNTFLNTILPQLTQENQVKLNQLLVGN 960 >2OT8-A nrPDB Length = 852 Score = 37.7 bits (86), Expect = 0.027, Method: Composition-based stats. Identities = 43/184 (23%), Positives = 73/184 (39%), Gaps = 15/184 (8%) Query: 12 AESVIASTAKTSERNLRQLETQDGFGLTLLHVIA---STNLPLSTRLAGALFFKNFIKRK 68 ++S + +T ++ L QL F L+ V+ S + P TR L KN +K Sbjct: 22 SQSPDTTIQRTVQQKLEQLNQYPDFNNYLIFVLTKLKSEDEP--TRSLSGLILKNNVKAH 79 Query: 69 WVDENGNHLLPANNVELIKKEIVPLMISLPNNLQVQIGEAISSIADSDFPDRWPTLLSDL 128 + + P + IK E + + ++ +G I++IA WP LL L Sbjct: 80 FQN------FPNGVTDFIKSECLNNIGDSSPLIRATVGILITTIASKGELQNWPDLLPKL 133 Query: 129 ASRLSNDDMVTNKGVLTVAHSIFKRWRPLFRSDELFLEIKLVLDVFTAPFLNLLKTVDEQ 188 S L ++D T +G I + + SD L L++ FL K + Sbjct: 134 CSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVL----DRPLNIMIPKFLQFFKHSSPK 189 Query: 189 ITAN 192 I ++ Sbjct: 190 IRSH 193 >5MU7-A nrPDB Length = 373 Score = 35.8 bits (81), Expect = 0.089, Method: Composition-based stats. Identities = 46/168 (27%), Positives = 74/168 (44%), Gaps = 27/168 (16%) Query: 287 EFIQITWNLLTSISNQPKY-----DIL-------VSKSLSFLTAVTRIP--------KYF 326 EFI+ + L + N+P+Y D+L V ++ S LTA+T P K+ Sbjct: 210 EFIRK--DALHNPQNKPRYLRLIFDLLEANTSTVVYEAASSLTALTNNPVAVKAAAGKFI 267 Query: 327 EIFNNESAMNNITEQIILPNVTLREEDVELFEDDPIEYIRRDLEGSDTDTRRRACTDFLK 386 E+ E+ +N + I+L V + E DD I I R L D D RR+A L+ Sbjct: 268 ELAIKEA--DNNVKLIVLDRVDQLRQKNEGILDDLIMEILRVLSSPDIDVRRKALEIALE 325 Query: 387 ELKEKNEVLVTNIFLAHMKGFVDQYMSDPSKNWKFKDLYIYLFTALAI 434 + KN V + + V+Q + KN +++ L I+ A+ Sbjct: 326 MVSSKNVEEVVLLLKKELSKTVEQ---EYEKNSEYRQLLIHSIHQCAV 370 >1IAY-A nrPDB Length = 428 Score = 31.5 bits (70), Expect = 1.9, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 4/59 (6%) Query: 600 IEIVTIMAKNPSNPRFTHYTFESIGAILNYTQRQNLPLLVDSMMPTFLTVFSEDIQEFI 658 I++ ++ NPSNP T +++ ++L++T + N+ L+ D + TVF D +F+ Sbjct: 187 IKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAA--TVF--DTPQFV 241 >6I9E-A nrPDB Length = 409 Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats. Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%) Query: 23 SERNLRQLETQDG--FGLTLLHVIASTNLPLSTRLA 56 SE L L TQD G+T +H + ST+LP+ R+A Sbjct: 61 SELELYLLRTQDAEQTGMTFVHQVGSTSLPVEARVA 96 >2X19-B nrPDB Length = 963 Score = 31.2 bits (69), Expect = 2.6, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 11/84 (13%) Query: 56 AGALFFKNFIKRKWVDENGNHLLPANNVELIKKEIVPLMISLPNNLQVQIGE---AISSI 112 A AL K I R W D +P + E +K ++ + + ++ + A++S+ Sbjct: 79 ASALHIK--ISRYWSD------IPTDQYESLKAQLFTQITRFASGSKIVLTRLCVALASL 130 Query: 113 ADSDFPDRWPTLLSDLASRLSNDD 136 A S PD WP ++D+ +D Sbjct: 131 ALSMMPDAWPCAVADMVRLFQAED 154 >5UIY-A nrPDB Length = 116 Score = 30.8 bits (68), Expect = 3.0, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 5/74 (6%) Query: 312 SLSFLTAVTRI--PKYFEIFNNESAMNNITEQIILPNVTLREE---DVELFEDDPIEYIR 366 S FL V++I P Y++I A+N I E++ L E D+EL + EY Sbjct: 29 SWPFLKLVSKIQVPDYYDIIKKPIALNIIREKVNKCEYKLASEFIDDIELMFSNCFEYNP 88 Query: 367 RDLEGSDTDTRRRA 380 R+ + TR +A Sbjct: 89 RNTSEAKAGTRLQA 102 >2JFN-A nrPDB Length = 285 Score = 30.8 bits (68), Expect = 3.1, Method: Composition-based stats. Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 12/89 (13%) Query: 606 MAKNPSNPRFTHYTFES-IGAILNYTQRQNLPLLVDSMMPTFLTVFSEDIQEFIPYVFQI 664 +A PS PR T F+S +G + Y + ++L +P +++ D F PY + Sbjct: 13 LAATPSEPRPTVLVFDSGVGGLSVYDEIRHL-------LPDLHYIYAFDNVAF-PYGEKS 64 Query: 665 IAFVVEQSATIPESIK---PLAQPLLAPN 690 AF+VE+ I +++ PLA ++A N Sbjct: 65 EAFIVERVVAIVTAVQERYPLALAVVACN 93 >3QY9-A nrPDB Length = 243 Score = 30.4 bits (67), Expect = 3.8, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 4/66 (6%) Query: 219 QDIPEFFEDNIQVGMGIFHKYLSYSNPLLEDPD----ETEHASVLIKVKSSIQELVQLYT 274 Q++P FF N+ G+ K L+ + PLL+D D E H + ++++L + Sbjct: 99 QNMPVFFSANMSYGVHALTKILAAAVPLLDDFDIELTEAHHNKKVDAPSGTLEKLYDVIV 158 Query: 275 TRYEDV 280 + E+V Sbjct: 159 SLKENV 164 >3MC6-C nrPDB Length = 497 Score = 30.4 bits (67), Expect = 3.8, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 21/42 (50%) Query: 611 SNPRFTHYTFESIGAILNYTQRQNLPLLVDSMMPTFLTVFSE 652 S P F H + I + Q+ LPL VDS + +F+ F E Sbjct: 213 SAPNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFME 254 >3RHF-A nrPDB Length = 289 Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%) Query: 353 DVELFEDDPIEYIRRDLEGSDTDTRRRACTDFLKELKEKNEVLVT---NIFLAHMKGFVD 409 D +ED I + + ++ + R A DF L E+ +V NI K + Sbjct: 139 DRSQYEDVLIHRVHGWADAAELERRYAAINDFESRLTEQGTTIVKVMLNISKDEQKKRLI 198 Query: 410 QYMSDPSKNWKF 421 + DPSK+WK+ Sbjct: 199 ARLDDPSKHWKY 210 >5U0S-2 nrPDB Length = 273 Score = 30.0 bits (66), Expect = 4.7, Method: Composition-based stats. Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 4/36 (11%) Query: 512 VYTYAAITIEKILTIRESNTSPAFIFHKEDISNSTE 547 V+ YA EK L SN P ++++ ED+SN TE Sbjct: 74 VFDYA----EKSLQADSSNLLPTYLYNSEDLSNDTE 105 >4FL3-A nrPDB Length = 635 Score = 30.0 bits (66), Expect = 5.1, Method: Composition-based stats. Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 16/99 (16%) Query: 252 ETEHASVLIKVKSSIQELVQLYTTRYEDVFGPMINEFIQITWNLLTS------ISNQPKY 305 E++ L+K + + VQ T +ED+ +I E+++ TWNL IS +P+ Sbjct: 95 ESDGLVCLLKKPFNRPQGVQPKTGPFEDLKENLIREYVKQTWNLQGQALEQAIISQKPQL 154 Query: 306 DILVSKSLSFLTAVTRIPKYFEIFNNESAMNNITEQIIL 344 + L++ TA ++P + + E +EQI+L Sbjct: 155 EKLIAT-----TAHEKMPWFHGKISREE-----SEQIVL 183 >1A81-A nrPDB Length = 254 Score = 30.0 bits (66), Expect = 5.1, Method: Composition-based stats. Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 16/99 (16%) Query: 252 ETEHASVLIKVKSSIQELVQLYTTRYEDVFGPMINEFIQITWNLLTS------ISNQPKY 305 E++ L+K + + VQ T +ED+ +I E+++ TWNL IS +P+ Sbjct: 87 ESDGLVCLLKKPFNRPQGVQPKTGPFEDLKENLIREYVKQTWNLQGQALEQAIISQKPQL 146 Query: 306 DILVSKSLSFLTAVTRIPKYFEIFNNESAMNNITEQIIL 344 + L++ TA ++P + + E +EQI+L Sbjct: 147 EKLIAT-----TAHEKMPWFHGKISREE-----SEQIVL 175 >1M4N-A nrPDB Length = 435 Score = 30.0 bits (66), Expect = 5.2, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 38/76 (50%), Gaps = 7/76 (9%) Query: 581 LQTSEDSIQPLFPQLLAQFIEIVTIMAKNPSNPRFTHYTFESIGAILNYTQRQNLPLLVD 640 Q +E +++ + + + + + ++ NPSNP T T + +L++ + + + L+ D Sbjct: 171 FQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISD 230 Query: 641 SMM-------PTFLTV 649 + P+F++V Sbjct: 231 EIYSGTAFSSPSFISV 246 >4IX8-A nrPDB Length = 444 Score = 30.0 bits (66), Expect = 5.7, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 22/34 (64%) Query: 609 NPSNPRFTHYTFESIGAILNYTQRQNLPLLVDSM 642 NPSNP ++++ + I+++ Q+ +PL+ D + Sbjct: 218 NPSNPCGSNFSRAHVSDIIDFCQQHQIPLISDEI 251 >3A74-A nrPDB Length = 493 Score = 29.6 bits (65), Expect = 7.3, Method: Composition-based stats. Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 3/36 (8%) Query: 582 QTSEDS-IQPLFPQLLAQFIEIVTIMAKNPSNPRFT 616 Q ED IQP F + +EI + KNP +PRFT Sbjct: 367 QKVEDKLIQPTF--IYGHPVEISPLAKKNPDDPRFT 400 >4Q6R-A nrPDB Length = 511 Score = 29.2 bits (64), Expect = 7.8, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 21/42 (50%) Query: 611 SNPRFTHYTFESIGAILNYTQRQNLPLLVDSMMPTFLTVFSE 652 S P+F H + + + + +PL VD+ + FL VF E Sbjct: 229 STPQFPHGVIDPVPEVAKLAVKYKIPLHVDACLGGFLIVFME 270 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.321 0.137 0.387 Lambda K H 0.267 0.0438 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,442,087 Number of Sequences: 36641 Number of extensions: 1940626 Number of successful extensions: 5008 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 31 Number of HSP's that attempted gapping in prelim test: 4979 Number of HSP's gapped (non-prelim): 56 length of query: 960 length of database: 10,336,785 effective HSP length: 106 effective length of query: 854 effective length of database: 6,452,839 effective search space: 5510724506 effective search space used: 5510724506 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 64 (29.2 bits)