BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P32906 (549 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1DL2-A nrPDB 1060 0.0 1X9D-A nrPDB 303 1e-82 1FO3-A nrPDB 301 4e-82 5KKB-A nrPDB 266 1e-71 4AYQ-A nrPDB 146 2e-35 1HCU-A nrPDB 140 2e-33 1KKT-A nrPDB 122 4e-28 5E4R-A nrPDB 30 2.1 4PH0-A nrPDB 30 2.2 4XDZ-A nrPDB 30 2.3 7REQ-A nrPDB 30 3.1 5OLC-A nrPDB 29 5.2 >1DL2-A nrPDB Length = 511 Score = 1060 bits (2740), Expect = 0.0, Method: Compositional matrix adjust. Identities = 511/516 (99%), Positives = 511/516 (99%), Gaps = 5/516 (0%) Query: 34 GAGEMRDRIESMFLESWRDYSKHGWGYDVYGPIEHTSHNMPRGNQPLGWIIVDSVDTLML 93 GAGEMRDRIESMFLESWRDYSKHGWGYDVYGPIEHTSHNMPRGNQPLGWIIVDSVDTLML Sbjct: 1 GAGEMRDRIESMFLESWRDYSKHGWGYDVYGPIEHTSHNMPRGNQPLGWIIVDSVDTLML 60 Query: 94 MYNSSTLYKSEFEAEIQRSEHWINDVLDFDIDAEVNVFETTIRMLGGLLSAYHLSDVLEV 153 MYNSSTLYKSEFEAEIQRSEHWINDVLDFDIDAEVNVFETTIRMLGGLLSAYHLSDVLEV Sbjct: 61 MYNSSTLYKSEFEAEIQRSEHWINDVLDFDIDAEVNVFETTIRMLGGLLSAYHLSDVLEV 120 Query: 154 GNKTVYLNKAIDLGDRLALAFLSTQTGIPYSSINLHSGQAVKNHADGGASSTAEFTTLQM 213 GNKTVYLNKAIDLGDRLALAFLSTQTGIPYSSINLHSGQAVKNHADGGASSTAEFTTLQM Sbjct: 121 GNKTVYLNKAIDLGDRLALAFLSTQTGIPYSSINLHSGQAVKNHADGGASSTAEFTTLQM 180 Query: 214 EFKYLAYLTGNRTYWELVERVYEPLYKNNDLLNTYDGLVPIYTFPDTGKFGASTIRFGSR 273 EFKYLAYLTGNRTYWELVERVYEPLYKNNDLLNTYDGLVPIYTFPDTGKFGASTIRFGSR Sbjct: 181 EFKYLAYLTGNRTYWELVERVYEPLYKNNDLLNTYDGLVPIYTFPDTGKFGASTIRFGSR 240 Query: 274 GDSFYEYLLKQYLLTHETLYYDLYRKSMEGMKKHLLAQSKPSSLWYIGEREQGLHGQLSP 333 GDSFYEYLLKQYLLTHETLYYDLYRKSMEGMKKHLLAQSKPSSLWYIGEREQGLHGQLSP Sbjct: 241 GDSFYEYLLKQYLLTHETLYYDLYRKSMEGMKKHLLAQSKPSSLWYIGEREQGLHGQLSP 300 Query: 334 KMDHLVCFMGGLLASGSTEGLSIHEARRRPFFSLSLERKSDWDLAKGITDTCYQMYKQSS 393 KMDHLVCFMGGLLASGSTEGLSIHEARRRPFFS KSDWDLAKGITDTCYQMYKQSS Sbjct: 301 KMDHLVCFMGGLLASGSTEGLSIHEARRRPFFS-----KSDWDLAKGITDTCYQMYKQSS 355 Query: 394 SGLAPEIVVFNDGNIKQDGWWRSSVGDFFVKPLDRHNLQRPETVESIMFMYHLSHDHKYR 453 SGLAPEIVVFNDGNIKQDGWWRSSVGDFFVKPLDRHNLQRPETVESIMFMYHLSHDHKYR Sbjct: 356 SGLAPEIVVFNDGNIKQDGWWRSSVGDFFVKPLDRHNLQRPETVESIMFMYHLSHDHKYR 415 Query: 454 EWGAEIATSFFENTCVDCNDPKLRRFTSLSDCITLPTKKSNNMESFWLAETLKYLYILFL 513 EWGAEIATSFFENTCVDCNDPKLRRFTSLSDCITLPTKKSNNMESFWLAETLKYLYILFL Sbjct: 416 EWGAEIATSFFENTCVDCNDPKLRRFTSLSDCITLPTKKSNNMESFWLAETLKYLYILFL 475 Query: 514 DEFDLTKVVFNTEAHPFPVLDEEILKSQSLTTGWSL 549 DEFDLTKVVFNTEAHPFPVLDEEILKSQSLTTGWSL Sbjct: 476 DEFDLTKVVFNTEAHPFPVLDEEILKSQSLTTGWSL 511 >1X9D-A nrPDB Length = 538 Score = 303 bits (777), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 191/496 (38%), Positives = 282/496 (56%), Gaps = 64/496 (12%) Query: 45 MFLESWRDYSKHGWGYDVYGPIEHTSHNMPRGNQPLGWIIVDSVDTLMLMYNSSTLYKSE 104 +FL +W+ Y K WG+D P+ + LG ++D++DT+ ++ Sbjct: 95 VFLHAWKGYRKFAWGHDELKPVSRSFSEW----FGLGLTLIDALDTMWIL---------G 141 Query: 105 FEAEIQRSEHWINDVLDFDIDAEVNVFETTIRMLGGLLSAYHLSDVLEVGNKTVYLNKAI 164 E + + W++ L F+ D +VN+FE+TIR+LGGLLSAYHLS +++L KA Sbjct: 142 LRKEFEEARKWVSKKLHFEKDVDVNLFESTIRILGGLLSAYHLS------GDSLFLRKAE 195 Query: 165 DLGDRLALAFLSTQTGIPYSSINLHSGQAVKNHADGGASSTAEFTTLQMEFKYLAYLTGN 224 D G+RL AF T + IPYS +N+ +G A S+ AE T++Q+EF+ L+ LTG+ Sbjct: 196 DFGNRLMPAF-RTPSKIPYSDVNIGTGVAHPPRWTSD-STVAEVTSIQLEFRELSRLTGD 253 Query: 225 RTYWELVERVYEPLYKNNDLLNTYDGLVPIYTFPDTGKFG-ASTIRFGSRGDSFYEYLLK 283 + + E VE+V + ++ L DGLVP++ +G F G+R DS+YEYLLK Sbjct: 254 KKFQEAVEKVTQHIH---GLSGKKDGLVPMFINTHSGLFTHLGVFTLGARADSYYEYLLK 310 Query: 284 QYLL--THETLYYDLYRKSMEGMKKHLLAQSKPSSLWYIGEREQGLHGQLSPKMDHLVCF 341 Q++ ET + Y +++EG++ HLL S+PS L ++GE HG+ S KMDHLVCF Sbjct: 311 QWIQGGKQETQLLEDYVEAIEGVRTHLLRHSEPSKLTFVGELA---HGRFSAKMDHLVCF 367 Query: 342 MGGLLASGSTEGLSIHEARRRPFFSLSLERKSDWDLAKGITDTCYQMYKQSSSGLAPEIV 401 + G LA G GL S +LA+ + +TCYQM +Q +GL+PEIV Sbjct: 368 LPGTLALGVYHGLP----------------ASHMELAQELMETCYQMNRQMETGLSPEIV 411 Query: 402 VFNDGNIKQDGWWRSSVGDFFVKPLDRHNLQRPETVESIMFMYHLSHDHKYREWGAEIAT 461 FN + + D VKP DRHNL RPETVES+ ++Y ++ D KY++WG EI Sbjct: 412 HFNL-------YPQPGRRDVEVKPADRHNLLRPETVESLFYLYRVTGDRKYQDWGWEILQ 464 Query: 462 SFFENTCVDCNDPKLRRFTSLSDCITLPTKKS--NNMESFWLAETLKYLYILFLDEFDLT 519 SF T V ++S+++ + P K + MESF+L ETLKYL++LF D+ +L Sbjct: 465 SFSRFTRVPSGG-----YSSINN-VQDPQKPEPRDKMESFFLGETLKYLFLLFSDDPNLL 518 Query: 520 KV---VFNTEAHPFPV 532 + VFNTEAHP P+ Sbjct: 519 SLDAYVFNTEAHPLPI 534 >1FO3-A nrPDB Length = 460 Score = 301 bits (772), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 191/496 (38%), Positives = 282/496 (56%), Gaps = 64/496 (12%) Query: 45 MFLESWRDYSKHGWGYDVYGPIEHTSHNMPRGNQPLGWIIVDSVDTLMLMYNSSTLYKSE 104 +FL +W+ Y K WG+D P+ + LG ++D++DT+ ++ Sbjct: 17 VFLHAWKGYRKFAWGHDELKPVSRSFSEW----FGLGLTLIDALDTMWIL---------G 63 Query: 105 FEAEIQRSEHWINDVLDFDIDAEVNVFETTIRMLGGLLSAYHLSDVLEVGNKTVYLNKAI 164 E + + W++ L F+ D +VN+FE+TIR+LGGLLSAYHLS +++L KA Sbjct: 64 LRKEFEEARKWVSKKLHFEKDVDVNLFESTIRILGGLLSAYHLS------GDSLFLRKAE 117 Query: 165 DLGDRLALAFLSTQTGIPYSSINLHSGQAVKNHADGGASSTAEFTTLQMEFKYLAYLTGN 224 D G+RL AF T + IPYS +N+ +G A S+ AE T++Q+EF+ L+ LTG+ Sbjct: 118 DFGNRLMPAF-RTPSKIPYSDVNIGTGVAHPPRWTSD-STVAEVTSIQLEFRELSRLTGD 175 Query: 225 RTYWELVERVYEPLYKNNDLLNTYDGLVPIYTFPDTGKFG-ASTIRFGSRGDSFYEYLLK 283 + + E VE+V + ++ L DGLVP++ +G F G+R DS+YEYLLK Sbjct: 176 KKFQEAVEKVTQHIH---GLSGKKDGLVPMFINTHSGLFTHLGVFTLGARADSYYEYLLK 232 Query: 284 QYLL--THETLYYDLYRKSMEGMKKHLLAQSKPSSLWYIGEREQGLHGQLSPKMDHLVCF 341 Q++ ET + Y +++EG++ HLL S+PS L ++GE HG+ S KMDHLVCF Sbjct: 233 QWIQGGKQETQLLEDYVEAIEGVRTHLLRHSEPSKLTFVGELA---HGRFSAKMDHLVCF 289 Query: 342 MGGLLASGSTEGLSIHEARRRPFFSLSLERKSDWDLAKGITDTCYQMYKQSSSGLAPEIV 401 + G LA G GL S +LA+ + +TCYQM +Q +GL+PEIV Sbjct: 290 LPGTLALGVYHGLP----------------ASHMELAQELMETCYQMNRQMETGLSPEIV 333 Query: 402 VFNDGNIKQDGWWRSSVGDFFVKPLDRHNLQRPETVESIMFMYHLSHDHKYREWGAEIAT 461 FN + + D VKP DRHNL RPETVES+ ++Y ++ D KY++WG EI Sbjct: 334 HFNL-------YPQPGRRDVEVKPADRHNLLRPETVESLFYLYRVTGDRKYQDWGWEILQ 386 Query: 462 SFFENTCVDCNDPKLRRFTSLSDCITLPTKKS--NNMESFWLAETLKYLYILFLDEFDLT 519 SF T V ++S+++ + P K + MESF+L ETLKYL++LF D+ +L Sbjct: 387 SFSRFTRVPSGG-----YSSINN-VQDPQKPEPRDKMESFFLGETLKYLFLLFSDDPNLL 440 Query: 520 KV---VFNTEAHPFPV 532 + VFNTEAHP P+ Sbjct: 441 SLDAYVFNTEAHPLPI 456 >5KKB-A nrPDB Length = 469 Score = 266 bits (681), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 174/506 (34%), Positives = 267/506 (52%), Gaps = 67/506 (13%) Query: 37 EMRDRIESMFLESWRDYSKHGWGYDVYGPIEHTSHNMPRGNQPLGWIIVDSVDTLMLMYN 96 E R +I+ M +W +Y ++ WG + PI H+ G IVD++DTL +M Sbjct: 21 EKRAKIKEMMTHAWNNYKRYAWGLNELKPISKEGHSSSLFGNIKGATIVDALDTLFIM-- 78 Query: 97 SSTLYKSEFEAEIQRSEHWINDVLDFDIDAEVNVFETTIRMLGGLLSAYHLSDVLEVGNK 156 + E Q ++ WI LDF+++AEV+VFE IR +GGLLSAY+LS + Sbjct: 79 -------GMKTEFQEAKSWIKKYLDFNVNAEVSVFEVNIRFVGGLLSAYYLS------GE 125 Query: 157 TVYLNKAIDLGDRLALAFLSTQTGIPYSSINLHSGQAVK-NHADGGASSTAEFTTLQMEF 215 ++ KA++LG +L AF T +GIP++ +N+ SG A GG+S AEF TL +EF Sbjct: 126 EIFRKKAVELGVKLLPAF-HTPSGIPWALLNMKSGIGRNWPWASGGSSILAEFGTLHLEF 184 Query: 216 KYLAYLTGNRTYWELVERVYEPLYKNNDLLNTYDGLVPIYTFPDTGKFGASTIRFGSRGD 275 +L++L+G+ + E V ++ L K L+ +GL P Y P +G++G + G GD Sbjct: 185 MHLSHLSGDPVFAEKVMKIRTVLNK----LDKPEGLYPNYLNPSSGQWGQHHVSVGGLGD 240 Query: 276 SFYEYLLKQYLLTHET------LYYDLYRKSMEGMKKHLLAQSKPSSLWYIGEREQGLHG 329 SFYEYLLK +L++ +T +Y+D +++ ++ HL+ +S L YI E + GL Sbjct: 241 SFYEYLLKAWLMSDKTDLEAKKMYFD----AVQAIETHLIRKSS-GGLTYIAEWKGGL-- 293 Query: 330 QLSPKMDHLVCFMGGLLASGSTEGLSIHEARRRPFFSLSLERKSDWDLAKGITDTCYQMY 389 L KM HL CF GG+ A G+ EAR + + L E I TC++ Y Sbjct: 294 -LEHKMGHLTCFAGGMFALGAD---GAPEARAQHYLELGAE----------IARTCHESY 339 Query: 390 KQSSSGLAPEIVVFNDGNIKQDGWWRSSVGDFFVKPLDRHNLQRPETVESIMFMYHLSHD 449 ++ L PE F+ G V + +++ + RPE +E+ M+M+ L+HD Sbjct: 340 NRTYVKLGPEAFRFDGG-----------VEAIATRQNEKYYILRPEVIETYMYMWRLTHD 388 Query: 450 HKYREWGAEIATSFFENTCVDCNDPKLRRFTSLSDCITLPTKKSNNMESFWLAETLKYLY 509 KYR W E + + V+ ++ L D + +SF+LAETLKYLY Sbjct: 389 PKYRTWAWEAVEALESHCRVNGG------YSGLRDVYIARESYDDVQQSFFLAETLKYLY 442 Query: 510 ILFLDE--FDLTKVVFNTEAHPFPVL 533 ++F D+ L +FNTEAHPFP+L Sbjct: 443 LIFSDDDLLPLEHWIFNTEAHPFPIL 468 >4AYQ-A nrPDB Length = 447 Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 134/492 (27%), Positives = 205/492 (41%), Gaps = 82/492 (16%) Query: 42 IESMFLESWRDYSKHGWGYDVYGPIEHTSHNMPRGNQPLGWIIVDSVDTLMLMYNSSTLY 101 + S F +W+ Y WG D P+ TS + LG +V+++DTL +M Sbjct: 17 VRSEFQWAWQGYVAKAWGKDEINPVSGTSRSFFIEGHDLGLSLVEALDTLWIM------- 69 Query: 102 KSEFEAEIQRSEHWINDVLDFDIDAEVNVFETTIRMLGGLLSAYHLSDVLEVGNKTVYLN 161 +AE Q W+ L FD+D VFET IR++GGLLSA HL+ V L Sbjct: 70 --GLDAEFQAGVDWVKANLSFDVDGNAQVFETNIRLVGGLLSA-HLA-----SGDPVLLA 121 Query: 162 KAIDLGDRLALAFLSTQTGIPYSSINLHSGQAVKNHADGGASSTAEFTTLQMEFKYLAYL 221 KA DL DRLA AF ++ G+P+ +NL +G AV + ++ AE T EF L+ L Sbjct: 122 KARDLADRLAKAFEASPHGLPWRYVNLRTG-AVSDP----ETNLAEIGTYLSEFGVLSQL 176 Query: 222 TGNRTYWELVERVYEPLYKNNDLLNTYDGLVPIYTFPDTGKFGASTIRFGSRGDSFYEYL 281 TG R Y+++ +R + GL+ TG F + DSFYEYL Sbjct: 177 TGERKYFDMAKRAMRHTLDRRSKI----GLMAANIHAMTGAFTSRNASIDVYADSFYEYL 232 Query: 282 LKQYLLTHETLYYDLYRKSMEGMKKHLLAQSK--PSSLWY-IGEREQGLHGQLSPKMDHL 338 + L + D R ++E + L Q+K LW+ + + E G L Sbjct: 233 WDAWALFGDE---DCKRWAVECVDAQLAHQAKRYDGRLWFPMVDFETG--AVTGTAQSEL 287 Query: 339 VCFMGGLLASGSTEGLSIHEARRRPFFSLSLERKSDWDLAKGITDTCYQMYKQSSSGLAP 398 + GLL + RK A+G Y Q++ G+ P Sbjct: 288 AAYYAGLLG--------------------QVGRK-----AQGDDYLASFTYLQATFGVIP 322 Query: 399 EIVVFNDGNIKQDGWWRSSVGDFFVKPLDRHNLQRPETVESIMFMYHLSHDHKYREWGAE 458 E + G +P +H RPE ++ + ++ + D +YR A Sbjct: 323 ESIDVTTG-----------------QPRRKHTGLRPEYPDACLNLWLIDRDPRYRRLAA- 364 Query: 459 IATSFFENTCVDCNDPKLRRFTSLSDCITLPTKKSNNMESFWLAETLKYLYILFLD--EF 516 + +T+L D T P + +N +W +E +KY Y+LF D Sbjct: 365 -----IHYREMKATSRAAFGYTALKDITTRPMTQDDNCPGYWWSEQMKYYYLLFSDTPRI 419 Query: 517 DLTKVVFNTEAH 528 D ++ +TEA+ Sbjct: 420 DYGQLQLSTEAN 431 >1HCU-A nrPDB Length = 503 Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 145/522 (27%), Positives = 232/522 (44%), Gaps = 79/522 (15%) Query: 42 IESMFLESWRDYSKHGWGYDVYGPIEHTSHNMPRGNQPLGWIIVDSVDTLMLMYNSSTLY 101 +++ F SW Y + +D P+ ++ + G G +D +DT +LM Sbjct: 19 VKAAFQTSWNAYHHFAFPHDDLHPVSNSFDDERNG---WGSSAIDGLDTAILM------- 68 Query: 102 KSEFEAEIQRSEHWINDVLDFDIDAEVN----VFETTIRMLGGLLSAYHLSDVLE----- 152 +A+I + ++F A N VFET IR LGGLLSAY D+L Sbjct: 69 ---GDADIVNTILQYVPQINFTTTAVANQGSSVFETNIRYLGGLLSAY---DLLRGPFSS 122 Query: 153 -VGNKTVY---LNKAIDLGDRLALAFLSTQTGIPYSSINLHSGQAVKNHADGGASSTAEF 208 N+T+ L +A L + L +AF +T +G+P ++ + + +++ AE Sbjct: 123 LATNQTLVNSLLRQAQTLANGLKVAF-TTPSGVPDPTVFFN---PTVRRSGASSNNVAEI 178 Query: 209 TTLQMEFKYLAYLTGNRTYWELVERVYEPLYKNNDLLNTYDGLVPIYTFPDTGKFGASTI 268 +L +E+ L+ LTGN Y +L ++ L + GL+ + G F S+ Sbjct: 179 GSLVLEWTRLSDLTGNPQYAQLAQKGESYLLNPKGSPEAWPGLIGTFVSTSNGTFQDSSG 238 Query: 269 RFGSRGDSFYEYLLKQYLLTHETL--YYDLYRKSMEGMKKHLLAQSKPSS---LWYIGER 323 + DSFYEYL+K YL Y D + + HL S PS+ L ++ Sbjct: 239 SWSGLMDSFYEYLIKMYLYDPVAFAHYKDRWVLGADSTIGHL--GSHPSTRKDLTFLSS- 295 Query: 324 EQGLHGQ-LSPKMDHLVCFMGGLLASGSTEGLSIHEARRRPFFSLSLERKSDWDLAKGIT 382 +GQ SP HL F GG G G+ ++E + D + Sbjct: 296 ---YNGQSTSPNSGHLASFGGGNFILG---GILLNEQKYI-------------DFGIKLA 336 Query: 383 DTCYQMYKQSSSGLAPEIVVFNDGNIKQDGWWRSSVGDFFVKP----LDRHNLQRPETVE 438 + + Y Q++SG+ PE + D G SS F+ + + RPET+E Sbjct: 337 SSYFGTYTQTASGIGPEGFAWVDSVTGAGGSPPSSQSGFYSSAGFWVTAPYYILRPETLE 396 Query: 439 SIMFMYHLSHDHKYREWGAEIATSFFENTCVDCNDPKLRRFTSLSDCITL-PTKKSNNME 497 S+ + Y ++ D K+++ E A S E+ C + ++S++D S++ME Sbjct: 397 SLYYAYRVTGDSKWQDLAWE-ALSAIEDACRAGS-----AYSSINDVTQANGGGASDDME 450 Query: 498 SFWLAETLKYLYILFLDEFDL-------TKVVFNTEAHPFPV 532 SFW AE LKY Y++F +E D+ K VFNTEAHPF + Sbjct: 451 SFWFAEALKYAYLIFAEESDVQVQATGGNKFVFNTEAHPFSI 492 >1KKT-A nrPDB Length = 511 Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 145/557 (26%), Positives = 247/557 (44%), Gaps = 93/557 (16%) Query: 11 TIVAIIAAIYYVPW--YEHFERKSPGAGEMR-DRIESMFLESWRDYSKHGWGYDVYGPIE 67 T+++++ + P+ E R P + + + D ++ F +W Y K+ + +D P+ Sbjct: 10 TVLSLLGSTIAHPYGETEAVLRSEPKSNQAKADAVKEAFQHAWNGYMKYAFPHDELTPVS 69 Query: 68 HTSHNMPRGNQPLGWIIVDSVDTLMLMYNSSTLYKSEFEAEIQRS--EHWINDVLDFDID 125 + + G G VD++ T ++M +A++ + EH + +DF Sbjct: 70 NGHADSRNG---WGASAVDALSTAVIM----------GKADVVNAILEHVAD--IDFSKT 114 Query: 126 AE-VNVFETTIRMLGGLLSAYHLSDVLEVGNKTVY---------LNKAIDLGDRLALAFL 175 ++ V++FETTIR L G+LS Y D+L+ K + L+++ +L D L AF Sbjct: 115 SDTVSLFETTIRYLAGMLSGY---DLLQGPAKNLVDNQDLIDGLLDQSRNLADVLKFAF- 170 Query: 176 STQTGIPYSSINLHSGQAVKNHADGGASST--AEFTTLQMEFKYLAYLTGNRTYWELVER 233 T +G+PY++IN+ S H + GA++ A TL +E+ L+ LTG+ Y +L ++ Sbjct: 171 DTPSGVPYNNINITS------HGNDGATTNGLAVTGTLVLEWTRLSDLTGDEEYAKLSQK 224 Query: 234 VYEPLYKNNDLLN-TYDGLVPIYTFPDTGKFGASTIRFGSRGDSFYEYLLKQYLLTHETL 292 L K + + GLV + G+F S + + DSFYEYL+K Y+ + Sbjct: 225 AESYLLKPQPSSSEPFPGLVGSSININDGQFADSRVSWNGGDDSFYEYLIKMYVYDPKRF 284 Query: 293 --YYDLYRKSMEGMKKHLLA--QSKP--SSLWYIGEREQGLHGQLSPKMDHLVCFMGGLL 346 Y D + + E KHL + +S+P + L R L Q HL CF GG Sbjct: 285 ETYKDRWVLAAESTIKHLKSHPKSRPDLTFLSSYSNRNYDLSSQ------HLTCFDGGSF 338 Query: 347 ASGSTEGLSIHEARRRPFFSLSLERKSDWDLAKGITDTCYQMYKQSSSGLAPEIVVFNDG 406 G T L+R+ D + D C Y + + + P+ ++ Sbjct: 339 LLGGT----------------VLDRQDFIDFGLELVDGCEATYNSTLTKIGPDSWGWDPK 382 Query: 407 NIKQDGWWRSSVGDFFVKPLDRHNLQRPETVESIMFMYHLSHDHKYRE--WGAEIATSFF 464 + D F++ + RPE +ES + + ++ YR+ W A +A Sbjct: 383 KVPSDQKEFYEKAGFYIS--SGSYVLRPEVIESFYYAHRVTGKEIYRDWVWNAFVA---I 437 Query: 465 ENTC-VDCNDPKLRRFTSLSDCITL-PTKKSNNMESFWLAETLKYLYILFLDE--FDLTK 520 +TC D F ++SD K +N ESF AE +KY Y+ ++ + + K Sbjct: 438 NSTCRTDSG------FAAVSDVNKANGGSKYDNQESFLFAEVMKYSYLAHSEDAAWQVQK 491 Query: 521 -----VVFNTEAHPFPV 532 V+NTEAHP V Sbjct: 492 GGKNTFVYNTEAHPISV 508 >5E4R-A nrPDB Length = 490 Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 4/62 (6%) Query: 367 LSLERKSD-WDLAKGITDTCYQMYKQSSSGLAPEIVVFNDGNIKQDGWWRSSVGDFFVKP 425 + LER+ D W A I D MY + + +A +I+VF ++ Q W +SV DF K Sbjct: 45 VGLERQGDSWRRA--IDDGFKPMYTKDAVAIA-DIIVFLVPDMVQKSLWLNSVKDFMKKG 101 Query: 426 LD 427 D Sbjct: 102 AD 103 >4PH0-A nrPDB Length = 215 Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust. Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 4/43 (9%) Query: 29 ERKSPGAGEMRDRIESMFLESWRDY----SKHGWGYDVYGPIE 67 + P AG++R + ++++L++W++ S W V GP E Sbjct: 100 QSAQPNAGDLRSQYQNLWLQAWKNLPTRPSVQPWSTIVQGPAE 142 >4XDZ-A nrPDB Length = 343 Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 4/62 (6%) Query: 367 LSLERKSD-WDLAKGITDTCYQMYKQSSSGLAPEIVVFNDGNIKQDGWWRSSVGDFFVKP 425 + LER+ D W A I D MY + + +A +I+VF ++ Q W +SV DF K Sbjct: 45 VGLERQGDSWRRA--IDDGFKPMYTKDAVAIA-DIIVFLVPDMVQKSLWLNSVKDFMKKG 101 Query: 426 LD 427 D Sbjct: 102 AD 103 >7REQ-A nrPDB Length = 727 Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust. Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 6/50 (12%) Query: 215 FKYLAYLTGNRTYWELVERV------YEPLYKNNDLLNTYDGLVPIYTFP 258 F+ LA G WE E++ E +YK+ D L+TY G+ P P Sbjct: 24 FEELAAKAGTGEAWETAEQIPVGTLFNEDVYKDMDWLDTYAGIPPFVHGP 73 >5OLC-A nrPDB Length = 396 Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust. Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 12/72 (16%) Query: 259 DTGKFG-------ASTIRFGSRGDSFYEYLLKQYLLTHETLYYDLYRKSMEGMKKHLLAQ 311 D G +G A+ I+ G D F +LL + + HE L+ ++YR+SM+ + +L Sbjct: 47 DDGTYGWGEGYGPAAVIKSGI--DFFTPFLLGKEAIGHEVLWQEMYRRSMDYARSGVLQA 104 Query: 312 SKPS---SLWYI 320 + + +LW I Sbjct: 105 AISAIDVALWDI 116 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1DL2-A nrPDB 760 0.0 5KKB-A nrPDB 537 e-153 1X9D-A nrPDB 531 e-151 1FO3-A nrPDB 527 e-150 1KKT-A nrPDB 501 e-142 1HCU-A nrPDB 472 e-133 4AYQ-A nrPDB 448 e-126 Sequences not found previously or not previously below threshold: 2V8I-A nrPDB 34 0.20 6MVG-A nrPDB 34 0.22 2VN6-B nrPDB 33 0.38 CONVERGED! >1DL2-A nrPDB Length = 511 Score = 760 bits (1962), Expect = 0.0, Method: Composition-based stats. Identities = 511/516 (99%), Positives = 511/516 (99%), Gaps = 5/516 (0%) Query: 34 GAGEMRDRIESMFLESWRDYSKHGWGYDVYGPIEHTSHNMPRGNQPLGWIIVDSVDTLML 93 GAGEMRDRIESMFLESWRDYSKHGWGYDVYGPIEHTSHNMPRGNQPLGWIIVDSVDTLML Sbjct: 1 GAGEMRDRIESMFLESWRDYSKHGWGYDVYGPIEHTSHNMPRGNQPLGWIIVDSVDTLML 60 Query: 94 MYNSSTLYKSEFEAEIQRSEHWINDVLDFDIDAEVNVFETTIRMLGGLLSAYHLSDVLEV 153 MYNSSTLYKSEFEAEIQRSEHWINDVLDFDIDAEVNVFETTIRMLGGLLSAYHLSDVLEV Sbjct: 61 MYNSSTLYKSEFEAEIQRSEHWINDVLDFDIDAEVNVFETTIRMLGGLLSAYHLSDVLEV 120 Query: 154 GNKTVYLNKAIDLGDRLALAFLSTQTGIPYSSINLHSGQAVKNHADGGASSTAEFTTLQM 213 GNKTVYLNKAIDLGDRLALAFLSTQTGIPYSSINLHSGQAVKNHADGGASSTAEFTTLQM Sbjct: 121 GNKTVYLNKAIDLGDRLALAFLSTQTGIPYSSINLHSGQAVKNHADGGASSTAEFTTLQM 180 Query: 214 EFKYLAYLTGNRTYWELVERVYEPLYKNNDLLNTYDGLVPIYTFPDTGKFGASTIRFGSR 273 EFKYLAYLTGNRTYWELVERVYEPLYKNNDLLNTYDGLVPIYTFPDTGKFGASTIRFGSR Sbjct: 181 EFKYLAYLTGNRTYWELVERVYEPLYKNNDLLNTYDGLVPIYTFPDTGKFGASTIRFGSR 240 Query: 274 GDSFYEYLLKQYLLTHETLYYDLYRKSMEGMKKHLLAQSKPSSLWYIGEREQGLHGQLSP 333 GDSFYEYLLKQYLLTHETLYYDLYRKSMEGMKKHLLAQSKPSSLWYIGEREQGLHGQLSP Sbjct: 241 GDSFYEYLLKQYLLTHETLYYDLYRKSMEGMKKHLLAQSKPSSLWYIGEREQGLHGQLSP 300 Query: 334 KMDHLVCFMGGLLASGSTEGLSIHEARRRPFFSLSLERKSDWDLAKGITDTCYQMYKQSS 393 KMDHLVCFMGGLLASGSTEGLSIHEARRRPFFS KSDWDLAKGITDTCYQMYKQSS Sbjct: 301 KMDHLVCFMGGLLASGSTEGLSIHEARRRPFFS-----KSDWDLAKGITDTCYQMYKQSS 355 Query: 394 SGLAPEIVVFNDGNIKQDGWWRSSVGDFFVKPLDRHNLQRPETVESIMFMYHLSHDHKYR 453 SGLAPEIVVFNDGNIKQDGWWRSSVGDFFVKPLDRHNLQRPETVESIMFMYHLSHDHKYR Sbjct: 356 SGLAPEIVVFNDGNIKQDGWWRSSVGDFFVKPLDRHNLQRPETVESIMFMYHLSHDHKYR 415 Query: 454 EWGAEIATSFFENTCVDCNDPKLRRFTSLSDCITLPTKKSNNMESFWLAETLKYLYILFL 513 EWGAEIATSFFENTCVDCNDPKLRRFTSLSDCITLPTKKSNNMESFWLAETLKYLYILFL Sbjct: 416 EWGAEIATSFFENTCVDCNDPKLRRFTSLSDCITLPTKKSNNMESFWLAETLKYLYILFL 475 Query: 514 DEFDLTKVVFNTEAHPFPVLDEEILKSQSLTTGWSL 549 DEFDLTKVVFNTEAHPFPVLDEEILKSQSLTTGWSL Sbjct: 476 DEFDLTKVVFNTEAHPFPVLDEEILKSQSLTTGWSL 511 >5KKB-A nrPDB Length = 469 Score = 537 bits (1382), Expect = e-153, Method: Composition-based stats. Identities = 174/514 (33%), Positives = 268/514 (52%), Gaps = 62/514 (12%) Query: 28 FERKSPGAG---EMRDRIESMFLESWRDYSKHGWGYDVYGPIEHTSHNMPRGNQPLGWII 84 E + P E R +I+ M +W +Y ++ WG + PI H+ G I Sbjct: 9 VENREPADATIREKRAKIKEMMTHAWNNYKRYAWGLNELKPISKEGHSSSLFGNIKGATI 68 Query: 85 VDSVDTLMLMYNSSTLYKSEFEAEIQRSEHWINDVLDFDIDAEVNVFETTIRMLGGLLSA 144 VD++DTL +M + E Q ++ WI LDF+++AEV+VFE IR +GGLLSA Sbjct: 69 VDALDTLFIM---------GMKTEFQEAKSWIKKYLDFNVNAEVSVFEVNIRFVGGLLSA 119 Query: 145 YHLSDVLEVGNKTVYLNKAIDLGDRLALAFLSTQTGIPYSSINLHSGQAVK-NHADGGAS 203 Y+LS + ++ KA++LG +L AF T +GIP++ +N+ SG A GG+S Sbjct: 120 YYLS------GEEIFRKKAVELGVKLLPAF-HTPSGIPWALLNMKSGIGRNWPWASGGSS 172 Query: 204 STAEFTTLQMEFKYLAYLTGNRTYWELVERVYEPLYKNNDLLNTYDGLVPIYTFPDTGKF 263 AEF TL +EF +L++L+G+ + E V ++ L K L+ +GL P Y P +G++ Sbjct: 173 ILAEFGTLHLEFMHLSHLSGDPVFAEKVMKIRTVLNK----LDKPEGLYPNYLNPSSGQW 228 Query: 264 GASTIRFGSRGDSFYEYLLKQYLLTHETLY--YDLYRKSMEGMKKHLLAQSKPSSLWYIG 321 G + G GDSFYEYLLK +L++ +T +Y +++ ++ HL+ +S L YI Sbjct: 229 GQHHVSVGGLGDSFYEYLLKAWLMSDKTDLEAKKMYFDAVQAIETHLIRKSS-GGLTYIA 287 Query: 322 EREQGLHGQLSPKMDHLVCFMGGLLASGSTEGLSIHEARRRPFFSLSLERKSDWDLAKGI 381 E + GL L KM HL CF GG+ A G+ EAR + + +L I Sbjct: 288 EWKGGL---LEHKMGHLTCFAGGMFALGAD---GAPEARAQHYL----------ELGAEI 331 Query: 382 TDTCYQMYKQSSSGLAPEIVVFNDGNIKQDGWWRSSVGDFFVKPLDRHNLQRPETVESIM 441 TC++ Y ++ L PE F+ G V + +++ + RPE +E+ M Sbjct: 332 ARTCHESYNRTYVKLGPEAFRFDGG-----------VEAIATRQNEKYYILRPEVIETYM 380 Query: 442 FMYHLSHDHKYREWGAEIATSFFENTCVDCNDPKLRRFTSLSDCITLPTKKSNNMESFWL 501 +M+ L+HD KYR W E + + V+ ++ L D + +SF+L Sbjct: 381 YMWRLTHDPKYRTWAWEAVEALESHCRVNGG------YSGLRDVYIARESYDDVQQSFFL 434 Query: 502 AETLKYLYILFLDE--FDLTKVVFNTEAHPFPVL 533 AETLKYLY++F D+ L +FNTEAHPFP+L Sbjct: 435 AETLKYLYLIFSDDDLLPLEHWIFNTEAHPFPIL 468 >1X9D-A nrPDB Length = 538 Score = 531 bits (1367), Expect = e-151, Method: Composition-based stats. Identities = 191/505 (37%), Positives = 283/505 (56%), Gaps = 64/505 (12%) Query: 36 GEMRDRIESMFLESWRDYSKHGWGYDVYGPIEHTSHNMPRGNQPLGWIIVDSVDTLMLMY 95 + + +FL +W+ Y K WG+D P+ + LG ++D++DT+ ++ Sbjct: 86 NYRQKGVIDVFLHAWKGYRKFAWGHDELKPVSRSFSEWF----GLGLTLIDALDTMWIL- 140 Query: 96 NSSTLYKSEFEAEIQRSEHWINDVLDFDIDAEVNVFETTIRMLGGLLSAYHLSDVLEVGN 155 E + + W++ L F+ D +VN+FE+TIR+LGGLLSAYHLS Sbjct: 141 --------GLRKEFEEARKWVSKKLHFEKDVDVNLFESTIRILGGLLSAYHLS------G 186 Query: 156 KTVYLNKAIDLGDRLALAFLSTQTGIPYSSINLHSGQAVKNHADGGASSTAEFTTLQMEF 215 +++L KA D G+RL AF T + IPYS +N+ +G A S+ AE T++Q+EF Sbjct: 187 DSLFLRKAEDFGNRLMPAF-RTPSKIPYSDVNIGTGVAHPPRWTSD-STVAEVTSIQLEF 244 Query: 216 KYLAYLTGNRTYWELVERVYEPLYKNNDLLNTYDGLVPIYTFPDTGKFG-ASTIRFGSRG 274 + L+ LTG++ + E VE+V + ++ L DGLVP++ +G F G+R Sbjct: 245 RELSRLTGDKKFQEAVEKVTQHIH---GLSGKKDGLVPMFINTHSGLFTHLGVFTLGARA 301 Query: 275 DSFYEYLLKQYLL--THETLYYDLYRKSMEGMKKHLLAQSKPSSLWYIGEREQGLHGQLS 332 DS+YEYLLKQ++ ET + Y +++EG++ HLL S+PS L ++GE HG+ S Sbjct: 302 DSYYEYLLKQWIQGGKQETQLLEDYVEAIEGVRTHLLRHSEPSKLTFVGELA---HGRFS 358 Query: 333 PKMDHLVCFMGGLLASGSTEGLSIHEARRRPFFSLSLERKSDWDLAKGITDTCYQMYKQS 392 KMDHLVCF+ G LA G GL S +LA+ + +TCYQM +Q Sbjct: 359 AKMDHLVCFLPGTLALGVYHGLPA----------------SHMELAQELMETCYQMNRQM 402 Query: 393 SSGLAPEIVVFNDGNIKQDGWWRSSVGDFFVKPLDRHNLQRPETVESIMFMYHLSHDHKY 452 +GL+PEIV FN + + D VKP DRHNL RPETVES+ ++Y ++ D KY Sbjct: 403 ETGLSPEIVHFNL-------YPQPGRRDVEVKPADRHNLLRPETVESLFYLYRVTGDRKY 455 Query: 453 REWGAEIATSFFENTCVDCNDPKLRRFTSLSDCITLPTKKS--NNMESFWLAETLKYLYI 510 ++WG EI SF T V ++S+++ P K + MESF+L ETLKYL++ Sbjct: 456 QDWGWEILQSFSRFTRVPSG-----GYSSINNV-QDPQKPEPRDKMESFFLGETLKYLFL 509 Query: 511 LFLDEFDLTKV---VFNTEAHPFPV 532 LF D+ +L + VFNTEAHP P+ Sbjct: 510 LFSDDPNLLSLDAYVFNTEAHPLPI 534 >1FO3-A nrPDB Length = 460 Score = 527 bits (1358), Expect = e-150, Method: Composition-based stats. Identities = 191/505 (37%), Positives = 283/505 (56%), Gaps = 64/505 (12%) Query: 36 GEMRDRIESMFLESWRDYSKHGWGYDVYGPIEHTSHNMPRGNQPLGWIIVDSVDTLMLMY 95 + + +FL +W+ Y K WG+D P+ + LG ++D++DT+ ++ Sbjct: 8 NYRQKGVIDVFLHAWKGYRKFAWGHDELKPVSRSFSEWF----GLGLTLIDALDTMWIL- 62 Query: 96 NSSTLYKSEFEAEIQRSEHWINDVLDFDIDAEVNVFETTIRMLGGLLSAYHLSDVLEVGN 155 E + + W++ L F+ D +VN+FE+TIR+LGGLLSAYHLS Sbjct: 63 --------GLRKEFEEARKWVSKKLHFEKDVDVNLFESTIRILGGLLSAYHLS------G 108 Query: 156 KTVYLNKAIDLGDRLALAFLSTQTGIPYSSINLHSGQAVKNHADGGASSTAEFTTLQMEF 215 +++L KA D G+RL AF T + IPYS +N+ +G A S+ AE T++Q+EF Sbjct: 109 DSLFLRKAEDFGNRLMPAF-RTPSKIPYSDVNIGTGVAHPPRWTSD-STVAEVTSIQLEF 166 Query: 216 KYLAYLTGNRTYWELVERVYEPLYKNNDLLNTYDGLVPIYTFPDTGKFG-ASTIRFGSRG 274 + L+ LTG++ + E VE+V + ++ L DGLVP++ +G F G+R Sbjct: 167 RELSRLTGDKKFQEAVEKVTQHIH---GLSGKKDGLVPMFINTHSGLFTHLGVFTLGARA 223 Query: 275 DSFYEYLLKQYLL--THETLYYDLYRKSMEGMKKHLLAQSKPSSLWYIGEREQGLHGQLS 332 DS+YEYLLKQ++ ET + Y +++EG++ HLL S+PS L ++GE HG+ S Sbjct: 224 DSYYEYLLKQWIQGGKQETQLLEDYVEAIEGVRTHLLRHSEPSKLTFVGELA---HGRFS 280 Query: 333 PKMDHLVCFMGGLLASGSTEGLSIHEARRRPFFSLSLERKSDWDLAKGITDTCYQMYKQS 392 KMDHLVCF+ G LA G GL S +LA+ + +TCYQM +Q Sbjct: 281 AKMDHLVCFLPGTLALGVYHGLPA----------------SHMELAQELMETCYQMNRQM 324 Query: 393 SSGLAPEIVVFNDGNIKQDGWWRSSVGDFFVKPLDRHNLQRPETVESIMFMYHLSHDHKY 452 +GL+PEIV FN + + D VKP DRHNL RPETVES+ ++Y ++ D KY Sbjct: 325 ETGLSPEIVHFNL-------YPQPGRRDVEVKPADRHNLLRPETVESLFYLYRVTGDRKY 377 Query: 453 REWGAEIATSFFENTCVDCNDPKLRRFTSLSDCITLPTKKS--NNMESFWLAETLKYLYI 510 ++WG EI SF T V ++S+++ P K + MESF+L ETLKYL++ Sbjct: 378 QDWGWEILQSFSRFTRVPSG-----GYSSINNV-QDPQKPEPRDKMESFFLGETLKYLFL 431 Query: 511 LFLDEFDLTKV---VFNTEAHPFPV 532 LF D+ +L + VFNTEAHP P+ Sbjct: 432 LFSDDPNLLSLDAYVFNTEAHPLPI 456 >1KKT-A nrPDB Length = 511 Score = 501 bits (1290), Expect = e-142, Method: Composition-based stats. Identities = 139/552 (25%), Positives = 237/552 (42%), Gaps = 83/552 (15%) Query: 11 TIVAIIAAIYYVPW--YEHFERKSPGAGEMR-DRIESMFLESWRDYSKHGWGYDVYGPIE 67 T+++++ + P+ E R P + + + D ++ F +W Y K+ + +D P+ Sbjct: 10 TVLSLLGSTIAHPYGETEAVLRSEPKSNQAKADAVKEAFQHAWNGYMKYAFPHDELTPVS 69 Query: 68 HTSHNMPRGNQPLGWIIVDSVDTLMLMYNSSTLYKSEFEAEIQRSEHWINDVLDFDIDAE 127 + + G G VD++ T ++M +A++ + +DF ++ Sbjct: 70 NGHADSRNG---WGASAVDALSTAVIM----------GKADVVNAILEHVADIDFSKTSD 116 Query: 128 -VNVFETTIRMLGGLLSAYHLSDVLEVGNKTVY---------LNKAIDLGDRLALAFLST 177 V++FETTIR L G+LS Y D+L+ K + L+++ +L D L AF T Sbjct: 117 TVSLFETTIRYLAGMLSGY---DLLQGPAKNLVDNQDLIDGLLDQSRNLADVLKFAF-DT 172 Query: 178 QTGIPYSSINLHSGQAVKNHADGGASS--TAEFTTLQMEFKYLAYLTGNRTYWELVERVY 235 +G+PY++IN+ S H + GA++ A TL +E+ L+ LTG+ Y +L ++ Sbjct: 173 PSGVPYNNINITS------HGNDGATTNGLAVTGTLVLEWTRLSDLTGDEEYAKLSQKAE 226 Query: 236 EPLYKNNDLL-NTYDGLVPIYTFPDTGKFGASTIRFGSRGDSFYEYLLKQYLLTHETL-- 292 L K + GLV + G+F S + + DSFYEYL+K Y+ + Sbjct: 227 SYLLKPQPSSSEPFPGLVGSSININDGQFADSRVSWNGGDDSFYEYLIKMYVYDPKRFET 286 Query: 293 YYDLYRKSMEGMKKHLLAQ--SKP--SSLWYIGEREQGLHGQLSPKMDHLVCFMGGLLAS 348 Y D + + E KHL + S+P + L R L Q HL CF GG Sbjct: 287 YKDRWVLAAESTIKHLKSHPKSRPDLTFLSSYSNRNYDLSSQ------HLTCFDGGSFLL 340 Query: 349 GSTEGLSIHEARRRPFFSLSLERKSDWDLAKGITDTCYQMYKQSSSGLAPEIVVFNDGNI 408 G T L+R+ D + D C Y + + + P+ ++ + Sbjct: 341 GGT----------------VLDRQDFIDFGLELVDGCEATYNSTLTKIGPDSWGWDPKKV 384 Query: 409 KQDGWWRSSVGDFFVKPLDRHNLQRPETVESIMFMYHLSHDHKYREWGAEIATSFFENTC 468 D F++ + RPE +ES + + ++ YR+W + Sbjct: 385 PSDQKEFYEKAGFYIS--SGSYVLRPEVIESFYYAHRVTGKEIYRDWVWNAFVAINSTCR 442 Query: 469 VDCNDPKLRRFTSLSDCITL-PTKKSNNMESFWLAETLKYLYILFLDE--FDLTK----- 520 D F ++SD K +N ESF AE +KY Y+ ++ + + K Sbjct: 443 TDSG------FAAVSDVNKANGGSKYDNQESFLFAEVMKYSYLAHSEDAAWQVQKGGKNT 496 Query: 521 VVFNTEAHPFPV 532 V+NTEAHP V Sbjct: 497 FVYNTEAHPISV 508 >1HCU-A nrPDB Length = 503 Score = 472 bits (1215), Expect = e-133, Method: Composition-based stats. Identities = 145/533 (27%), Positives = 231/533 (43%), Gaps = 72/533 (13%) Query: 27 HFERKSPGAGEMRDRIESMFLESWRDYSKHGWGYDVYGPIEHTSHNMPRGNQPLGWIIVD 86 +R SP +++ F SW Y + +D P+ ++ + G G +D Sbjct: 5 ATKRGSPNPTRA-AAVKAAFQTSWNAYHHFAFPHDDLHPVSNSFDDERNG---WGSSAID 60 Query: 87 SVDTLMLMYNSSTLYKSEFEAEIQRSEHWINDVLDFDIDAEVN----VFETTIRMLGGLL 142 +DT +LM +A+I + ++F A N VFET IR LGGLL Sbjct: 61 GLDTAILM----------GDADIVNTILQYVPQINFTTTAVANQGSSVFETNIRYLGGLL 110 Query: 143 SAYHL---SDVLEVGNKTVY---LNKAIDLGDRLALAFLSTQTGIPYSSINLHSGQAVKN 196 SAY L N+T+ L +A L + L +AF +T +G+P ++ + Sbjct: 111 SAYDLLRGPFSSLATNQTLVNSLLRQAQTLANGLKVAF-TTPSGVPDPTVFFN---PTVR 166 Query: 197 HADGGASSTAEFTTLQMEFKYLAYLTGNRTYWELVERVYEPLYKNNDLLNTYDGLVPIYT 256 + +++ AE +L +E+ L+ LTGN Y +L ++ L + GL+ + Sbjct: 167 RSGASSNNVAEIGSLVLEWTRLSDLTGNPQYAQLAQKGESYLLNPKGSPEAWPGLIGTFV 226 Query: 257 FPDTGKFGASTIRFGSRGDSFYEYLLKQYLLTHETL--YYDLYRKSMEGMKKHLLAQSKP 314 G F S+ + DSFYEYL+K YL Y D + + HL S P Sbjct: 227 STSNGTFQDSSGSWSGLMDSFYEYLIKMYLYDPVAFAHYKDRWVLGADSTIGHL--GSHP 284 Query: 315 SS---LWYIGEREQGLHGQLSPKMDHLVCFMGGLLASGSTEGLSIHEARRRPFFSLSLER 371 S+ L ++ SP HL F GG G G+ ++E + Sbjct: 285 STRKDLTFLSSYNGQ---STSPNSGHLASFGGGNFILG---GILLNEQKY---------- 328 Query: 372 KSDWDLAKGITDTCYQMYKQSSSGLAPEIVVFNDGNIKQDGWWRSSVGDFFVKP----LD 427 D + + + Y Q++SG+ PE + D G SS F+ Sbjct: 329 ---IDFGIKLASSYFGTYTQTASGIGPEGFAWVDSVTGAGGSPPSSQSGFYSSAGFWVTA 385 Query: 428 RHNLQRPETVESIMFMYHLSHDHKYREWGAEIATSFFENTCVDCNDPKLRRFTSLSDCIT 487 + + RPET+ES+ + Y ++ D K+++ E A S E+ C + ++S++D Sbjct: 386 PYYILRPETLESLYYAYRVTGDSKWQDLAWE-ALSAIEDACRAGS-----AYSSINDVTQ 439 Query: 488 L-PTKKSNNMESFWLAETLKYLYILFLDEFDL-------TKVVFNTEAHPFPV 532 S++MESFW AE LKY Y++F +E D+ K VFNTEAHPF + Sbjct: 440 ANGGGASDDMESFWFAEALKYAYLIFAEESDVQVQATGGNKFVFNTEAHPFSI 492 >4AYQ-A nrPDB Length = 447 Score = 448 bits (1151), Expect = e-126, Method: Composition-based stats. Identities = 130/492 (26%), Positives = 200/492 (40%), Gaps = 82/492 (16%) Query: 42 IESMFLESWRDYSKHGWGYDVYGPIEHTSHNMPRGNQPLGWIIVDSVDTLMLMYNSSTLY 101 + S F +W+ Y WG D P+ TS + LG +V+++DTL +M Sbjct: 17 VRSEFQWAWQGYVAKAWGKDEINPVSGTSRSFFIEGHDLGLSLVEALDTLWIM------- 69 Query: 102 KSEFEAEIQRSEHWINDVLDFDIDAEVNVFETTIRMLGGLLSAYHLSDVLEVGNKTVYLN 161 +AE Q W+ L FD+D VFET IR++GGLLSA+ V L Sbjct: 70 --GLDAEFQAGVDWVKANLSFDVDGNAQVFETNIRLVGGLLSAH------LASGDPVLLA 121 Query: 162 KAIDLGDRLALAFLSTQTGIPYSSINLHSGQAVKNHADGGASSTAEFTTLQMEFKYLAYL 221 KA DL DRLA AF ++ G+P+ +NL +G ++ AE T EF L+ L Sbjct: 122 KARDLADRLAKAFEASPHGLPWRYVNLRTGAVSDP-----ETNLAEIGTYLSEFGVLSQL 176 Query: 222 TGNRTYWELVERVYEPLYKNNDLLNTYDGLVPIYTFPDTGKFGASTIRFGSRGDSFYEYL 281 TG R Y+++ +R + GL+ TG F + DSFYEYL Sbjct: 177 TGERKYFDMAKRAMRHTLDRRSKI----GLMAANIHAMTGAFTSRNASIDVYADSFYEYL 232 Query: 282 LKQYLLTHETLYYDLYRKSMEGMKKHLLAQSK--PSSLWY-IGEREQGLHGQLSPKMDHL 338 + L + D R ++E + L Q+K LW+ + + E G L Sbjct: 233 WDAWALFGDE---DCKRWAVECVDAQLAHQAKRYDGRLWFPMVDFETG--AVTGTAQSEL 287 Query: 339 VCFMGGLLASGSTEGLSIHEARRRPFFSLSLERKSDWDLAKGITDTCYQMYKQSSSGLAP 398 + GLL + RK A+G Y Q++ G+ P Sbjct: 288 AAYYAGLLG--------------------QVGRK-----AQGDDYLASFTYLQATFGVIP 322 Query: 399 EIVVFNDGNIKQDGWWRSSVGDFFVKPLDRHNLQRPETVESIMFMYHLSHDHKYREWGAE 458 E + G +P +H RPE ++ + ++ + D +YR A Sbjct: 323 ESIDVTTG-----------------QPRRKHTGLRPEYPDACLNLWLIDRDPRYRRLAA- 364 Query: 459 IATSFFENTCVDCNDPKLRRFTSLSDCITLPTKKSNNMESFWLAETLKYLYILFLD--EF 516 + +T+L D T P + +N +W +E +KY Y+LF D Sbjct: 365 -----IHYREMKATSRAAFGYTALKDITTRPMTQDDNCPGYWWSEQMKYYYLLFSDTPRI 419 Query: 517 DLTKVVFNTEAH 528 D ++ +TEA+ Sbjct: 420 DYGQLQLSTEAN 431 >2V8I-A nrPDB Length = 543 Score = 33.7 bits (75), Expect = 0.20, Method: Composition-based stats. Identities = 19/119 (15%), Positives = 33/119 (27%), Gaps = 6/119 (5%) Query: 402 VFNDGNIKQDGWWRS-SVGDFFVKPLDRHNLQRPETVESIMFMYHLSHDHKYREWGAEIA 460 + +Q W + NL R + + LS D +Y++ +I Sbjct: 33 GVDPRTGQQLEWIFPDGRRAVLSNFSAQQNLMR-----VMSGLSQLSGDPRYQKRAEDIV 87 Query: 461 TSFFENTCVDCNDPKLRRFTSLSDCITLPTKKSNNMESFWLAETLKYLYILFLDEFDLT 519 F+N + P S L Y ++F + D T Sbjct: 88 RYHFQNYQDPSGLLYWGGHRFVDLKTLQPEGPSEKEMVHELKNAYPYYDLMFSVDSDAT 146 >6MVG-A nrPDB Length = 777 Score = 33.7 bits (75), Expect = 0.22, Method: Composition-based stats. Identities = 37/199 (18%), Positives = 67/199 (33%), Gaps = 8/199 (4%) Query: 45 MFLESWRDYSKHGWGYDVYGPIEHTSHNMPRGNQPLGWIIVDSVDTLMLMYNSSTLYKSE 104 E + K + + P N N P W +D D Y + Y E Sbjct: 23 AMREIFNLNEKWAFSKEAIKPPVAMPQNWYWVNLPHTWNAIDGQDGGNDYYRGTCFYAKE 82 Query: 105 F-EAEIQRSEHWINDVLDFDIDAEVNVFETTIRMLGGLLSAY--HLSDVLEVGNKTVYLN 161 + E+ E + + L + A+V V + G S + +++D L G + + Sbjct: 83 VQKEELPEGEQYYLEFLGVNASADVYVNGNHLDHHDGGYSTWRVNMTDALTDGKNLIVVA 142 Query: 162 KAIDLGDRLALAFLS-TQTGIPYSSINL----HSGQAVKNHADGGASSTAEFTTLQMEFK 216 DR+ T G Y +N+ S + + G T E + Sbjct: 143 VDNSANDRVYPQKADFTFYGGMYRDVNIIAVNKSHFDLDYYGGNGLKVTPEVADKNAKIA 202 Query: 217 YLAYLTGNRTYWELVERVY 235 +L+G + +LV ++ Sbjct: 203 VEVFLSGEKAGQQLVYQIT 221 >2VN6-B nrPDB Length = 64 Score = 32.9 bits (73), Expect = 0.38, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Query: 96 NSSTLYKSEFEAEIQRSEHWINDVLDFDIDAEVNVFETTI--RMLGGLLS 143 N + + + I ++H LD ++D EVN F+ I + L G++S Sbjct: 12 NVDSTDFAGLKKYIMAADHAYVKNLDVNLDNEVNAFDLAILKKYLLGMVS 61 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.308 0.117 0.299 Lambda K H 0.267 0.0356 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 18,465,641 Number of Sequences: 36641 Number of extensions: 689529 Number of successful extensions: 1820 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 18 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 1672 Number of HSP's gapped (non-prelim): 29 length of query: 549 length of database: 10,336,785 effective HSP length: 102 effective length of query: 447 effective length of database: 6,599,403 effective search space: 2949933141 effective search space used: 2949933141 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 61 (28.3 bits)