BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P32861 (499 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 2I5K-A nrPDB 1002 0.0 3R2W-A nrPDB 514 e-146 5WEG-A nrPDB 500 e-142 2Q4J-A nrPDB 469 e-132 3GUE-A nrPDB 309 2e-84 4M2B-A nrPDB 273 1e-73 1VM8-A nrPDB 49 4e-06 1JV1-A nrPDB 47 3e-05 4BMA-A nrPDB 44 2e-04 3OC9-A nrPDB 40 0.003 2YQJ-A nrPDB 36 0.044 1LFW-A nrPDB 32 0.93 2N5T-A nrPDB 31 0.98 4ZBK-B nrPDB 31 1.6 5JAA-A nrPDB 30 3.4 >2I5K-A nrPDB Length = 488 Score = 1002 bits (2591), Expect = 0.0, Method: Compositional matrix adjust. Identities = 488/488 (100%), Positives = 488/488 (100%) Query: 12 TYAFESNTNSVAASQMRNALNKLADSSKLDDAARAKFENELDSFFTLFRRYLVEKSSRTT 71 TYAFESNTNSVAASQMRNALNKLADSSKLDDAARAKFENELDSFFTLFRRYLVEKSSRTT Sbjct: 1 TYAFESNTNSVAASQMRNALNKLADSSKLDDAARAKFENELDSFFTLFRRYLVEKSSRTT 60 Query: 72 LEWDKIKSPNPDEVVKYEIISQQPENVSNLSKLAVLKLNGGLGTSMGCVGPKSVIEVREG 131 LEWDKIKSPNPDEVVKYEIISQQPENVSNLSKLAVLKLNGGLGTSMGCVGPKSVIEVREG Sbjct: 61 LEWDKIKSPNPDEVVKYEIISQQPENVSNLSKLAVLKLNGGLGTSMGCVGPKSVIEVREG 120 Query: 132 NTFLDLSVRQIEYLNRQYDSDVPLLLMNSFNTDKDTEHLIKKYSANRIRIRSFNQSRFPR 191 NTFLDLSVRQIEYLNRQYDSDVPLLLMNSFNTDKDTEHLIKKYSANRIRIRSFNQSRFPR Sbjct: 121 NTFLDLSVRQIEYLNRQYDSDVPLLLMNSFNTDKDTEHLIKKYSANRIRIRSFNQSRFPR 180 Query: 192 VYKDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDNLGAT 251 VYKDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDNLGAT Sbjct: 181 VYKDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDNLGAT 240 Query: 252 VDLKILNHMIETGAEYIMELTDKTRADVKGGTLISYDGQVRLLEVAQVPKEHIDEFKNIR 311 VDLKILNHMIETGAEYIMELTDKTRADVKGGTLISYDGQVRLLEVAQVPKEHIDEFKNIR Sbjct: 241 VDLKILNHMIETGAEYIMELTDKTRADVKGGTLISYDGQVRLLEVAQVPKEHIDEFKNIR 300 Query: 312 KFTNFNTNNLWINLKAVKRLIESSNLEMEIIPNQKTITRDGHEINVLQLETACGAAIRHF 371 KFTNFNTNNLWINLKAVKRLIESSNLEMEIIPNQKTITRDGHEINVLQLETACGAAIRHF Sbjct: 301 KFTNFNTNNLWINLKAVKRLIESSNLEMEIIPNQKTITRDGHEINVLQLETACGAAIRHF 360 Query: 372 DGAHGVVVPRSRFLPVKTCSDLLLVKSDLFRLEHGSLKLDPSRFGPNPLIKLGSHFKKVS 431 DGAHGVVVPRSRFLPVKTCSDLLLVKSDLFRLEHGSLKLDPSRFGPNPLIKLGSHFKKVS Sbjct: 361 DGAHGVVVPRSRFLPVKTCSDLLLVKSDLFRLEHGSLKLDPSRFGPNPLIKLGSHFKKVS 420 Query: 432 GFNARIPHIPKIVELDHLTITGNVFLGKDVTLRGTVIIVCSDGHKIDIPNGSILENVVVT 491 GFNARIPHIPKIVELDHLTITGNVFLGKDVTLRGTVIIVCSDGHKIDIPNGSILENVVVT Sbjct: 421 GFNARIPHIPKIVELDHLTITGNVFLGKDVTLRGTVIIVCSDGHKIDIPNGSILENVVVT 480 Query: 492 GNLQILEH 499 GNLQILEH Sbjct: 481 GNLQILEH 488 >3R2W-A nrPDB Length = 528 Score = 514 bits (1323), Expect = e-146, Method: Compositional matrix adjust. Identities = 264/474 (55%), Positives = 355/474 (74%), Gaps = 19/474 (4%) Query: 40 LDDAARAKFEN---ELDSFFTLFRRYLVEKSSRTTLEWDKIKSPNPDEVVKYEIISQQ-- 94 L A+ +FE+ +LD F LF R+L EK +++W KI+ P D + YE I + Sbjct: 60 LTTASSHEFEHTKKDLDGFRKLFHRFLQEKGP--SVDWGKIQRPPEDSIQPYEKIKARGL 117 Query: 95 PENVSN-LSKLAVLKLNGGLGTSMGCVGPKSVIEVREGNTFLDLSVRQIEYLNRQYDSDV 153 P+N+S+ L+KL V+KLNGGLGTSMGC GPKS+I VR NTFLDL+V+QIE+LN+ Y++DV Sbjct: 118 PDNISSVLNKLVVVKLNGGLGTSMGCKGPKSLIGVRNENTFLDLTVQQIEHLNKTYNTDV 177 Query: 154 PLLLMNSFNTDKDTEHLIKKYSANRIRIRSFNQSRFPRVYKDSLLPVPTEYDSP---LDA 210 PL+LMNSFNTD+DT+ +++KY+ R++I +FNQSR+PR+ K+SLLPV + +A Sbjct: 178 PLVLMNSFNTDEDTKKILQKYNHCRVKIYTFNQSRYPRINKESLLPVAKDVSYSGENTEA 237 Query: 211 WYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDNLGATVDLKILNHMIE----TGAE 266 WYPPGHGD++ S + SG LD I +G+E +FVSN DNLGATVDL ILNH++ E Sbjct: 238 WYPPGHGDIYASFYNSGLLDTFIGEGKEYIFVSNIDNLGATVDLYILNHLMNPPNGKRCE 297 Query: 267 YIMELTDKTRADVKGGTLISYDGQVRLLEVAQVPKEHIDEFKNIRKFTNFNTNNLWINLK 326 ++ME+T+KTRADVKGGTL Y+G++RL+E+AQVPK H+DEFK++ KF FNTNNLWI+L Sbjct: 298 FVMEVTNKTRADVKGGTLTQYEGKLRLVEIAQVPKAHVDEFKSVSKFKIFNTNNLWISLA 357 Query: 327 AVKRLIESSNLEMEIIPNQKTITRDGHEINVLQLETACGAAIRHFDGAHGVVVPRSRFLP 386 AVKRL E + ++MEII N KT+ DG +NV+QLETA GAAI+ F+ + G+ VPRSRFLP Sbjct: 358 AVKRLQEQNAIDMEIIVNAKTL--DGG-LNVIQLETAVGAAIKSFENSLGINVPRSRFLP 414 Query: 387 VKTCSDLLLVKSDLFRLEHGSLKLDPSRFGPN-PLIKLGSHFKKVSGFNARIPHIPKIVE 445 VKT SDLLLV S+L+ L GSL + R P PL+KLGS F KV + R IP ++E Sbjct: 415 VKTTSDLLLVMSNLYSLNAGSLTMSEKREFPTVPLVKLGSSFTKVQDYLRRFESIPDMLE 474 Query: 446 LDHLTITGNVFLGKDVTLRGTVIIVCSDGHKIDIPNGSILENVVVTGNLQILEH 499 LDHLT++G+V GK+V+L+GTVII+ + G +IDIP G++LEN +V+GNL+IL+H Sbjct: 475 LDHLTVSGDVTFGKNVSLKGTVIIIANHGDRIDIPPGAVLENKIVSGNLRILDH 528 >5WEG-A nrPDB Length = 476 Score = 500 bits (1288), Expect = e-142, Method: Compositional matrix adjust. Identities = 265/468 (56%), Positives = 342/468 (73%), Gaps = 16/468 (3%) Query: 31 LNKL-ADSSKLDDAARAKFENELDSFFTLFRRYLVEKSSRTTLEWDKIKSPNPDEVVKYE 89 L+KL A+ +KLD + ENE F +L RYL ++ + +EW KI++P + VV Y+ Sbjct: 15 LDKLRAEVAKLDQIS----ENEKAGFISLVSRYLSGEAEQ--IEWSKIQTPTDEVVVPYD 68 Query: 90 IISQQPENVSN----LSKLAVLKLNGGLGTSMGCVGPKSVIEVREGNTFLDLSVRQIEYL 145 ++ PE++ L KL VLKLNGGLGT+MGC GPKSVIEVR G TFLDL V QIE L Sbjct: 69 TLASPPEDLEETKKLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRNGFTFLDLIVIQIESL 128 Query: 146 NRQYDSDVPLLLMNSFNTDKDTEHLIKKYSANRIRIRSFNQSRFPRVYKDSLLPVPTEYD 205 N++Y VPLLLMNSFNT DT+ +++KYS + I I +FNQS++PR+ + LP+P++ Sbjct: 129 NKKYGCSVPLLLMNSFNTHDDTQKIVEKYSNSNIEIHTFNQSQYPRIVTEDFLPLPSKGK 188 Query: 206 SPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDNLGATVDLKILNHMIETGA 265 S D WYPPGHGD+F SL+ SG+LD L+AQG+E +F++N DNLGA VD+KILNH+I Sbjct: 189 SGKDGWYPPGHGDVFPSLNNSGKLDILLAQGKEYVFIANSDNLGAIVDIKILNHLINNQN 248 Query: 266 EYIMELTDKTRADVKGGTLISYDGQVRLLEVAQVPKEHIDEFKNIRKFTNFNTNNLWINL 325 EY ME+T KT ADVKGGTLISY+G+V+LLE+AQVP EH++EFK+I KF FNTNNLW+NL Sbjct: 249 EYCMEVTPKTLADVKGGTLISYEGRVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNL 308 Query: 326 KAVKRLIESSNLEMEIIPNQKTITRDGHEINVLQLETACGAAIRHFDGAHGVVVPRSRFL 385 KA+KRL+E+ L+MEIIPN K + DG + VLQLETA GAAIR FD A G+ VPRSRFL Sbjct: 309 KAIKRLVEAEALKMEIIPNPKEV--DG--VKVLQLETAAGAAIRFFDKAIGINVPRSRFL 364 Query: 386 PVKTCSDLLLVKSDLFRLEHGSLKLDPSRFGP-NPLIKLGSHFKKVSGFNARIPHIPKIV 444 PVK SDLLLV+SDL+ L G + +P+R P NP I+LG FKKV+ F AR IP IV Sbjct: 365 PVKATSDLLLVQSDLYTLVDGFVIRNPARANPANPSIELGPEFKKVANFLARFKSIPSIV 424 Query: 445 ELDHLTITGNVFLGKDVTLRGTVIIVCSDGHKIDIPNGSILENVVVTG 492 ELD L ++G+V+ G +TL+G V I G K++IP+G++LEN V G Sbjct: 425 ELDSLKVSGDVWFGSGITLKGKVTITAKSGVKLEIPDGAVLENKDVNG 472 >2Q4J-A nrPDB Length = 469 Score = 469 bits (1207), Expect = e-132, Method: Compositional matrix adjust. Identities = 241/472 (51%), Positives = 327/472 (69%), Gaps = 21/472 (4%) Query: 26 QMRNALNKLADSSKLDDAARAKFENELDSFFTLFRRYLVEKSSRTTLEWDKIKSPNPDEV 85 Q+++A++ L + S E+E F +L RYL ++ +EW KI++P + V Sbjct: 10 QLKSAVDGLTEMS----------ESEKSGFISLVSRYLSGEAQH--IEWSKIQTPTDEIV 57 Query: 86 VKYEIISQQPENVSNLSKLAVLKL----NGGLGTSMGCVGPKSVIEVREGNTFLDLSVRQ 141 V YE ++ ++V+ L + NGGLGT+MGC GPKSVIEVR+G TFLDL V Q Sbjct: 58 VPYEKMTPVSQDVAETKNLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRDGLTFLDLIVIQ 117 Query: 142 IEYLNRQYDSDVPLLLMNSFNTDKDTEHLIKKYSANRIRIRSFNQSRFPRVYKDSLLPVP 201 IE LN +Y VPL+LMNSFNT DT +++KY+ + + I +FNQS++PRV D +P P Sbjct: 118 IENLNNKYGCKVPLVLMNSFNTHDDTHKIVEKYTNSNVDIHTFNQSKYPRVVADEFVPWP 177 Query: 202 TEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDNLGATVDLKILNHMI 261 ++ + + WYPPGHGD+F +L SG+LD ++QG+E +FV+N DNLGA VDL IL H+I Sbjct: 178 SKGKTDKEGWYPPGHGDVFPALMNSGKLDTFLSQGKEYVFVANSDNLGAIVDLTILKHLI 237 Query: 262 ETGAEYIMELTDKTRADVKGGTLISYDGQVRLLEVAQVPKEHIDEFKNIRKFTNFNTNNL 321 + EY ME+T KT ADVKGGTLISY+G+V+LLE+AQVP EH++EFK+I KF FNTNNL Sbjct: 238 QNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNL 297 Query: 322 WINLKAVKRLIESSNLEMEIIPNQKTITRDGHEINVLQLETACGAAIRHFDGAHGVVVPR 381 W+NLKA+K+L+E+ L+MEIIPN K + DG + VLQLETA GAAIR FD A GV VPR Sbjct: 298 WVNLKAIKKLVEADALKMEIIPNPKEV--DG--VKVLQLETAAGAAIRFFDNAIGVNVPR 353 Query: 382 SRFLPVKTCSDLLLVKSDLFRLEHGSLKLDPSRFGP-NPLIKLGSHFKKVSGFNARIPHI 440 SRFLPVK SDLLLV+SDL+ L G + + +R P NP I+LG FKKV+ F +R I Sbjct: 354 SRFLPVKASSDLLLVQSDLYTLVDGFVTRNKARTNPSNPSIELGPEFKKVATFLSRFKSI 413 Query: 441 PKIVELDHLTITGNVFLGKDVTLRGTVIIVCSDGHKIDIPNGSILENVVVTG 492 P IVELD L ++G+V+ G + L+G V + G K++IP+ +++EN + G Sbjct: 414 PSIVELDSLKVSGDVWFGSSIVLKGKVTVAAKSGVKLEIPDRAVVENKNING 465 >3GUE-A nrPDB Length = 484 Score = 309 bits (792), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 180/434 (41%), Positives = 260/434 (59%), Gaps = 21/434 (4%) Query: 78 KSPNPDEVVKY-EIISQQPENVSNLSKLAVLKLNGGLGTSMGCVGPKSVIEVREGNTFLD 136 KS +P E + + + I + EN + L + VLKLNGGLGT MG GPKS+++V+ G TFLD Sbjct: 50 KSISPVESLPFLQGIETKGENTALLRQAVVLKLNGGLGTGMGLNGPKSLLQVKNGQTFLD 109 Query: 137 LSVRQIEYLNRQYDSDVPLLLMNSFNTDKDTEHLIKKYSANRIRIRS---FNQSRFPRVY 193 + Q+E+ + + +VP +LMNSF+T +T++ ++KY S Q+R P++ Sbjct: 110 FTALQLEHFRQVRNCNVPFMLMNSFSTSGETKNFLRKYPTLYEVFDSDIELMQNRVPKIR 169 Query: 194 KDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDNLGATVD 253 +D+ PV E D P W PPGHGD++ L+ SG+LD L+ +G +F+SNGDNLGAT+D Sbjct: 170 QDNFFPVTYEAD-PTCEWVPPGHGDVYTVLYSSGKLDYLLGKGYRYMFISNGDNLGATLD 228 Query: 254 LKILNHMIETGAEYIMELTDKTRADVKGGTLISYD------GQVR----LLEVAQVPKEH 303 +++L++M E ++ME+ +T +D KGG L D GQ R L E AQ PKE Sbjct: 229 VRLLDYMHEKQLGFLMEVCRRTESDKKGGHLAYKDVIDETTGQTRRRFVLRESAQCPKED 288 Query: 304 IDEFKNIRKFTNFNTNNLWINLKAVKRLIES--SNLEMEIIPNQKTIT-RDGHEINVLQL 360 D F+NI K FNTNN+WINL +K++++ L + ++ N KT+ +D V QL Sbjct: 289 EDSFQNIAKHCFFNTNNIWINLMELKKMMDEQLGVLRLPVMRNPKTVNPQDSQSTKVYQL 348 Query: 361 ETACGAAIRHFDGAHGVVVPRSRFLPVKTCSDLLLVKSDLFRL-EHGSLKLDPSRFGPNP 419 E A GAAI FD + VVVPR RF PVKTCSDLL ++SD +++ E L L R G P Sbjct: 349 EVAMGAAISLFDRSEAVVVPRERFAPVKTCSDLLALRSDAYQVTEDQRLVLCEERNGKPP 408 Query: 420 LIKL-GSHFKKVSGFNARIP-HIPKIVELDHLTITGNVFLGKDVTLRGTVIIVCSDGHKI 477 I L G H+K + GF + +P + + LT+ G V G DV++RG V+I + Sbjct: 409 AIDLDGEHYKMIDGFEKLVKGGVPSLRQCTSLTVRGLVEFGADVSVRGNVVIKNLKEEPL 468 Query: 478 DIPNGSILENVVVT 491 I +G +L+N VV Sbjct: 469 IIGSGRVLDNEVVV 482 >4M2B-A nrPDB Length = 505 Score = 273 bits (698), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 158/416 (37%), Positives = 239/416 (57%), Gaps = 26/416 (6%) Query: 101 LSKLAVLKLNGGLGTSMGCVGPKSVIEVREGNTFLDLSVRQIEYLNRQYDSDVPLLLMNS 160 L VLKLNGGLGT MG K+++EV++G TFLD + Q++YL + + +LM+S Sbjct: 73 LQSTVVLKLNGGLGTGMGLCDAKTLLEVKDGKTFLDFTALQVQYLRQHCSEHLRFMLMDS 132 Query: 161 FNTDKDTEHLIKKYSANRIRI----RSFNQSRFPRVYKDSLLPVPTEYDSPLDAWYPPGH 216 FNT T+ +K ++ Q++ P++ +D+L P ++P W PPGH Sbjct: 133 FNTSASTKSFLKARYPWLYQVFDSEVELMQNQVPKILQDTLEPAAWA-ENPAYEWAPPGH 191 Query: 217 GDLFESLHVSGELDALIAQGREILFVSNGDNLGATVDLKILNHMIETGAEYIMELTDKTR 276 GD++ +L+ SG+L L+ QG +FVSNGDNLGAT+D ++L +M + +++ME+ +T Sbjct: 192 GDIYTALYGSGKLQELVEQGYRYMFVSNGDNLGATIDKRVLAYMEKEKIDFLMEVCRRTE 251 Query: 277 ADVKGGTLI-------SYDGQ-------VRLLEVAQVPKEHIDEFKNIRKFTNFNTNNLW 322 +D KGG L DGQ + L E AQ PK ++ F++I K++ FNTNNLW Sbjct: 252 SDKKGGHLARQTVYVKGKDGQPDAEKRVLDLRESAQCPKADMESFQDINKYSFFNTNNLW 311 Query: 323 INLKAVKRLIE--SSNLEMEIIPNQKTI-TRDGHEINVLQLETACGAAIRHFDGAHGVVV 379 I L + ++ L + +I N+KT+ + + V QLETA GAAI F+ A +VV Sbjct: 312 IRLPVLLETMQEHGGTLPLPVIRNEKTVDSSNSASPKVYQLETAMGAAIAMFESASAIVV 371 Query: 380 PRSRFLPVKTCSDLLLVKSDLFRL-EHGSLKLDPSRFGPNPLIKLGS-HFKKVSGFNARI 437 PRSRF PVKTC+DLL ++SD + + + L LD G P++ L S H+K ++GF + Sbjct: 372 PRSRFAPVKTCADLLALRSDAYVVTDDFRLVLDDRCHGHPPVVDLDSAHYKMMNGFEKLV 431 Query: 438 PH-IPKIVELDHLTITGNVFLGKDVTLRGTVIIVCSD-GHKIDIPNGSILENVVVT 491 H +P +VE +T+ G V G L GTV I +D IP+G+ L + + Sbjct: 432 QHGVPSLVECKRVTVKGLVQFGAGNVLTGTVTIENTDSASAFVIPDGAKLNDTTAS 487 >1VM8-A nrPDB Length = 534 Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 65/292 (22%), Positives = 129/292 (44%), Gaps = 31/292 (10%) Query: 32 NKLADSSKLD---DAARAKFENELDSFFTLFRRYLVEKSSRTTLE-WDKIKSPNPDEVV- 86 N+L+++ +++ + FE EL+SFF R+ + E + E D P P +V+ Sbjct: 35 NELSEAQQMELYMELQAMNFE-ELNSFF---RKAIGEFDRSSHQEKVDARMEPVPRQVLG 90 Query: 87 -----KYEIISQQPENVSNLS--KLAVLKLNGGLGTSMGCVGPKSVIEVR--EGNTFLDL 137 + ++ + + E +S +S K+AVL L GG GT +G PK + +V T + Sbjct: 91 SATRDQEQLQAWESEGLSQISQNKVAVLLLAGGQGTRLGVSYPKGMYDVGLPSHKTLFQI 150 Query: 138 SVRQIEYLNRQYD------SDVPLLLMNSFNTDKDTEHLIKK---YSANRIRIRSFNQSR 188 +I L + + +P +M S T + T+ K + + + F Q Sbjct: 151 QAERILKLQQLAEKHHGNKCTIPWYIMTSGRTMESTKEFFTKHKFFGLKKENVVFFQQGM 210 Query: 189 FPRVYKDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDNL 248 P + D + + + + P G+G L+ +L ++ + +G + V DN+ Sbjct: 211 LPAMSFDGKIILEEKNKVSM---APDGNGGLYRALAAQNIVEDMEQRGICSIHVYCVDNI 267 Query: 249 GATV-DLKILNHMIETGAEYIMELTDKTRADVKGGTLISYDGQVRLLEVAQV 299 V D + + I+ GA+ ++ +KT G + DG +++E +++ Sbjct: 268 LVKVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRVDGVYQVVEYSEI 319 >1JV1-A nrPDB Length = 505 Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 63/290 (21%), Positives = 126/290 (43%), Gaps = 27/290 (9%) Query: 32 NKLADSSKLDDAARAKFEN--ELDSFFTLFRRYLVEKSSRTTLEWDKIKSPNPDEVV--- 86 N+L ++ +++ A + N EL+ FF + S + + D P P EV+ Sbjct: 23 NELEEAQQVELYAELQAMNFEELNFFFQKAIEGFNQSSHQKNV--DARMEPVPREVLGSA 80 Query: 87 ---KYEIISQQPENVSNLS--KLAVLKLNGGLGTSMGCVGPKSVIEVR--EGNTFLDLSV 139 + ++ + + E + +S K+AVL L GG GT +G PK + +V T + Sbjct: 81 TRDQDQLQAWESEGLFQISQNKVAVLLLAGGQGTRLGVAYPKGMYDVGLPSRKTLFQIQA 140 Query: 140 RQIEYLNR---QYDSD---VPLLLMNSFNTDKDTEHLIKK---YSANRIRIRSFNQSRFP 190 +I L + +Y + +P +M S T + T+ K + + + F Q P Sbjct: 141 ERILKLQQVAEKYYGNKCIIPWYIMTSGRTMESTKEFFTKHKYFGLKKENVIFFQQGMLP 200 Query: 191 RVYKDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDNLGA 250 + D + + + + P G+G L+ +L ++ + +G + V DN+ Sbjct: 201 AMSFDGKIILEEKNKVSMA---PDGNGGLYRALAAQNIVEDMEQRGIWSIHVYCVDNILV 257 Query: 251 TV-DLKILNHMIETGAEYIMELTDKTRADVKGGTLISYDGQVRLLEVAQV 299 V D + + I+ GA+ ++ +KT G + DG +++E +++ Sbjct: 258 KVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRVDGVYQVVEYSEI 307 >4BMA-A nrPDB Length = 509 Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 49/241 (20%), Positives = 101/241 (41%), Gaps = 19/241 (7%) Query: 102 SKLAVLKLNGGLGTSMGCVGPKSVIEV--REGNTFLDLSVRQIEYLN------RQYDSDV 153 +K+AV+ + GG GT +G PK ++ + + +I L ++ + Sbjct: 127 NKVAVVLMAGGQGTRLGSSAPKGCFDIGLPSHKSLFQIQAERIAKLQLLAQRISGKEAVI 186 Query: 154 PLLLMNSFNTDKDTEHLI---KKYSANRIRIRSFNQSRFPRVYKDSLLPVPTEYDSPLDA 210 P +M S T K TE K + N+ + F Q P + + + + +++ A Sbjct: 187 PWYVMTSGPTRKPTEEFFEQHKYFGLNKSDVIIFEQGVLPCISNEGKILMESKFKV---A 243 Query: 211 WYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDN-LGATVDLKILNHMIETGAEYIM 269 P G+G ++++L SG + + +G E + DN L D + + Sbjct: 244 VAPDGNGGIYQALLTSGVREDMRKRGIEHIHTYCVDNCLVKVADPVFIGFAASKQVDIAT 303 Query: 270 ELTDKTRADVKGGTLISYDGQVRLLEVAQVPKEHID----EFKNIRKFTNFNTNNLWINL 325 ++ K A G ++ +G+ ++E +++ KE + + ++ KF N N + + Sbjct: 304 KVVRKRNATESVGLILQKNGKPDVVEYSEIDKETAEAKDPKQPDVLKFRAANIVNHYYSF 363 Query: 326 K 326 K Sbjct: 364 K 364 >3OC9-A nrPDB Length = 405 Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust. Identities = 55/229 (24%), Positives = 98/229 (42%), Gaps = 28/229 (12%) Query: 89 EIISQQPENVSNLSKLAVLKLNGGLGTSMGCVGPKSV----------IEVREGNTFLDLS 138 E+ISQ K A++ GG G+ +G PK + I L L Sbjct: 29 ELISQ--------GKTALITPAGGQGSRLGFEHPKGMFVLPFEIPKSIFQMTSERLLRLQ 80 Query: 139 VRQIEYLNRQYDSDVPLLLMNSFNTDKDTEHLIKK---YSANRIRIRSFNQSRFPRV-YK 194 EY + Q + + LM + T ++ + K+ + + +I F Q P V + Sbjct: 81 ELASEY-SHQKNVMIHWFLMTNEETIEEINNYFKEHQYFGLSSEQIHCFPQGMLPVVDFN 139 Query: 195 DSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDN-LGATVD 253 +L + D P A P GHG LF++L +G L+ + +G + N DN L VD Sbjct: 140 GKILY--EKKDKPYMA--PNGHGGLFKALKDNGILEFMNEKGIKYSVAHNVDNILCKDVD 195 Query: 254 LKILNHMIETGAEYIMELTDKTRADVKGGTLISYDGQVRLLEVAQVPKE 302 ++ +M +E +++ K + K G L+ +++++E ++ E Sbjct: 196 PNMIGYMDLLQSEICIKIVKKGFKEEKVGVLVKEQERIKVVEYTELTDE 244 >2YQJ-A nrPDB Length = 486 Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust. Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 15/147 (10%) Query: 103 KLAVLKLNGGLGTSMGCVGPKSV--IEVREGNTFLDLS---VRQIEYLNRQY--DSDVPL 155 ++AVL + GG GT +G PK IE+ + + + +IE L +QY + P+ Sbjct: 103 EVAVLLMAGGQGTRLGSSAPKGCFNIELPSQKSLFQIQAEKILKIEQLAQQYLKSTKKPI 162 Query: 156 L---LMNSFNTDKDTEHLI---KKYSANRIRIRSFNQSRFPRVYKDSLLPVPTEYDSPLD 209 + +M S T TE + N ++ FNQ P + + E + + Sbjct: 163 INWYIMTSGPTRNATESFFIENNYFGLNSHQVIFFNQGTLP-CFNLQGNKILLELKNSI- 220 Query: 210 AWYPPGHGDLFESLHVSGELDALIAQG 236 P G+G L+++L +G LD L ++G Sbjct: 221 CQSPDGNGGLYKALKDNGILDDLNSKG 247 >1LFW-A nrPDB Length = 470 Score = 31.6 bits (70), Expect = 0.93, Method: Compositional matrix adjust. Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 13/108 (12%) Query: 254 LKILNHM--IETGAEYI-----MELTDKTR------ADVKGGTLISYDGQVRLLEVAQVP 300 L I+ HM + G + ME+ ++ R AD KG +L +Y G + L E P Sbjct: 82 LGIIGHMDVVPAGEGWTRDPFKMEIDEEGRIYGRGSADDKGPSLTAYYGMLLLKEAGFKP 141 Query: 301 KEHIDEFKNIRKFTNFNTNNLWINLKAVKRLIESSNLEMEIIPNQKTI 348 K+ ID + TN+ + ++ + ++ S + E II ++ I Sbjct: 142 KKKIDFVLGTNEETNWVGIDYYLKHEPTPDIVFSPDAEYPIINGEQGI 189 >2N5T-A nrPDB Length = 575 Score = 31.2 bits (69), Expect = 0.98, Method: Compositional matrix adjust. Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%) Query: 318 TNNLWINLKAVKRLIESSNLEMEIIPNQKTITRDGHEINVLQ-LETACGAAIRHFDGAHG 376 TN + ++AV+ + S E+ + + IT DGH++ V + T +GA G Sbjct: 232 TNEVIDKMRAVQEQVASEKAELAKLKDLPAITLDGHQVEVCANIGTVRDVEGAERNGAEG 291 Query: 377 VVVPRSRFL 385 V + R+ FL Sbjct: 292 VGLYRTEFL 300 >4ZBK-B nrPDB Length = 189 Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust. Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 7/79 (8%) Query: 284 LISYDGQVRLLEVAQVPKEHIDEFKNIRKFTNFNTNNLWINLKAVKRLIESSNLEMEIIP 343 ++ DGQVR++ V I + N LW VKR +E L +++P Sbjct: 78 MVGQDGQVRMV-VGAAGGTQITTATALAIIYN-----LWFGYD-VKRAVEEPRLHNQLLP 130 Query: 344 NQKTITRDGHEINVLQLET 362 N T+ R+ + LET Sbjct: 131 NVTTVERNIDQAVTAALET 149 >5JAA-A nrPDB Length = 103 Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust. Identities = 14/43 (32%), Positives = 27/43 (62%), Gaps = 1/43 (2%) Query: 63 LVEKSSRTTLEWDKIKS-PNPDEVVKYEIISQQPENVSNLSKL 104 L+ SSRT W++ +S PN V +++ + PE +S++++L Sbjct: 61 LLHTSSRTLENWEQGRSVPNGQAVTLLKLVQRHPETLSHIAEL 103 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 2I5K-A nrPDB 754 0.0 5WEG-A nrPDB 640 0.0 2Q4J-A nrPDB 637 0.0 3R2W-A nrPDB 627 e-180 3GUE-A nrPDB 564 e-161 4M2B-A nrPDB 530 e-151 1JV1-A nrPDB 329 1e-90 1VM8-A nrPDB 326 2e-89 4BMA-A nrPDB 280 1e-75 Sequences not found previously or not previously below threshold: 2YQJ-A nrPDB 194 7e-50 3OC9-A nrPDB 141 8e-34 4BQH-A nrPDB 135 4e-32 3OH0-A nrPDB 69 5e-12 4PJ1-A nrPDB 35 0.093 1JNE-A nrPDB 35 0.093 4MYB-A nrPDB 33 0.35 1Y7H-A nrPDB 32 0.54 4CVH-A nrPDB 32 0.65 5H7J-A nrPDB 31 1.3 3PMO-A nrPDB 30 1.9 5X7Y-A nrPDB 30 2.7 1BYG-A nrPDB 29 5.3 1SVT-O nrPDB 28 9.4 3PS9-A nrPDB 28 9.9 >2I5K-A nrPDB Length = 488 Score = 754 bits (1946), Expect = 0.0, Method: Composition-based stats. Identities = 488/488 (100%), Positives = 488/488 (100%) Query: 12 TYAFESNTNSVAASQMRNALNKLADSSKLDDAARAKFENELDSFFTLFRRYLVEKSSRTT 71 TYAFESNTNSVAASQMRNALNKLADSSKLDDAARAKFENELDSFFTLFRRYLVEKSSRTT Sbjct: 1 TYAFESNTNSVAASQMRNALNKLADSSKLDDAARAKFENELDSFFTLFRRYLVEKSSRTT 60 Query: 72 LEWDKIKSPNPDEVVKYEIISQQPENVSNLSKLAVLKLNGGLGTSMGCVGPKSVIEVREG 131 LEWDKIKSPNPDEVVKYEIISQQPENVSNLSKLAVLKLNGGLGTSMGCVGPKSVIEVREG Sbjct: 61 LEWDKIKSPNPDEVVKYEIISQQPENVSNLSKLAVLKLNGGLGTSMGCVGPKSVIEVREG 120 Query: 132 NTFLDLSVRQIEYLNRQYDSDVPLLLMNSFNTDKDTEHLIKKYSANRIRIRSFNQSRFPR 191 NTFLDLSVRQIEYLNRQYDSDVPLLLMNSFNTDKDTEHLIKKYSANRIRIRSFNQSRFPR Sbjct: 121 NTFLDLSVRQIEYLNRQYDSDVPLLLMNSFNTDKDTEHLIKKYSANRIRIRSFNQSRFPR 180 Query: 192 VYKDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDNLGAT 251 VYKDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDNLGAT Sbjct: 181 VYKDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDNLGAT 240 Query: 252 VDLKILNHMIETGAEYIMELTDKTRADVKGGTLISYDGQVRLLEVAQVPKEHIDEFKNIR 311 VDLKILNHMIETGAEYIMELTDKTRADVKGGTLISYDGQVRLLEVAQVPKEHIDEFKNIR Sbjct: 241 VDLKILNHMIETGAEYIMELTDKTRADVKGGTLISYDGQVRLLEVAQVPKEHIDEFKNIR 300 Query: 312 KFTNFNTNNLWINLKAVKRLIESSNLEMEIIPNQKTITRDGHEINVLQLETACGAAIRHF 371 KFTNFNTNNLWINLKAVKRLIESSNLEMEIIPNQKTITRDGHEINVLQLETACGAAIRHF Sbjct: 301 KFTNFNTNNLWINLKAVKRLIESSNLEMEIIPNQKTITRDGHEINVLQLETACGAAIRHF 360 Query: 372 DGAHGVVVPRSRFLPVKTCSDLLLVKSDLFRLEHGSLKLDPSRFGPNPLIKLGSHFKKVS 431 DGAHGVVVPRSRFLPVKTCSDLLLVKSDLFRLEHGSLKLDPSRFGPNPLIKLGSHFKKVS Sbjct: 361 DGAHGVVVPRSRFLPVKTCSDLLLVKSDLFRLEHGSLKLDPSRFGPNPLIKLGSHFKKVS 420 Query: 432 GFNARIPHIPKIVELDHLTITGNVFLGKDVTLRGTVIIVCSDGHKIDIPNGSILENVVVT 491 GFNARIPHIPKIVELDHLTITGNVFLGKDVTLRGTVIIVCSDGHKIDIPNGSILENVVVT Sbjct: 421 GFNARIPHIPKIVELDHLTITGNVFLGKDVTLRGTVIIVCSDGHKIDIPNGSILENVVVT 480 Query: 492 GNLQILEH 499 GNLQILEH Sbjct: 481 GNLQILEH 488 >5WEG-A nrPDB Length = 476 Score = 640 bits (1651), Expect = 0.0, Method: Composition-based stats. Identities = 260/468 (55%), Positives = 338/468 (72%), Gaps = 16/468 (3%) Query: 31 LNKL-ADSSKLDDAARAKFENELDSFFTLFRRYLVEKSSRTTLEWDKIKSPNPDEVVKYE 89 L+KL A+ +KLD + ENE F +L RYL ++ + +EW KI++P + VV Y+ Sbjct: 15 LDKLRAEVAKLDQIS----ENEKAGFISLVSRYLSGEAEQ--IEWSKIQTPTDEVVVPYD 68 Query: 90 IISQQPENVSNLSKLAVLKL----NGGLGTSMGCVGPKSVIEVREGNTFLDLSVRQIEYL 145 ++ PE++ KL + NGGLGT+MGC GPKSVIEVR G TFLDL V QIE L Sbjct: 69 TLASPPEDLEETKKLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRNGFTFLDLIVIQIESL 128 Query: 146 NRQYDSDVPLLLMNSFNTDKDTEHLIKKYSANRIRIRSFNQSRFPRVYKDSLLPVPTEYD 205 N++Y VPLLLMNSFNT DT+ +++KYS + I I +FNQS++PR+ + LP+P++ Sbjct: 129 NKKYGCSVPLLLMNSFNTHDDTQKIVEKYSNSNIEIHTFNQSQYPRIVTEDFLPLPSKGK 188 Query: 206 SPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDNLGATVDLKILNHMIETGA 265 S D WYPPGHGD+F SL+ SG+LD L+AQG+E +F++N DNLGA VD+KILNH+I Sbjct: 189 SGKDGWYPPGHGDVFPSLNNSGKLDILLAQGKEYVFIANSDNLGAIVDIKILNHLINNQN 248 Query: 266 EYIMELTDKTRADVKGGTLISYDGQVRLLEVAQVPKEHIDEFKNIRKFTNFNTNNLWINL 325 EY ME+T KT ADVKGGTLISY+G+V+LLE+AQVP EH++EFK+I KF FNTNNLW+NL Sbjct: 249 EYCMEVTPKTLADVKGGTLISYEGRVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNL 308 Query: 326 KAVKRLIESSNLEMEIIPNQKTITRDGHEINVLQLETACGAAIRHFDGAHGVVVPRSRFL 385 KA+KRL+E+ L+MEIIPN K + DG + VLQLETA GAAIR FD A G+ VPRSRFL Sbjct: 309 KAIKRLVEAEALKMEIIPNPKEV--DG--VKVLQLETAAGAAIRFFDKAIGINVPRSRFL 364 Query: 386 PVKTCSDLLLVKSDLFRLEHGSLKLDPSRFGP-NPLIKLGSHFKKVSGFNARIPHIPKIV 444 PVK SDLLLV+SDL+ L G + +P+R P NP I+LG FKKV+ F AR IP IV Sbjct: 365 PVKATSDLLLVQSDLYTLVDGFVIRNPARANPANPSIELGPEFKKVANFLARFKSIPSIV 424 Query: 445 ELDHLTITGNVFLGKDVTLRGTVIIVCSDGHKIDIPNGSILENVVVTG 492 ELD L ++G+V+ G +TL+G V I G K++IP+G++LEN V G Sbjct: 425 ELDSLKVSGDVWFGSGITLKGKVTITAKSGVKLEIPDGAVLENKDVNG 472 >2Q4J-A nrPDB Length = 469 Score = 637 bits (1642), Expect = 0.0, Method: Composition-based stats. Identities = 241/472 (51%), Positives = 327/472 (69%), Gaps = 21/472 (4%) Query: 26 QMRNALNKLADSSKLDDAARAKFENELDSFFTLFRRYLVEKSSRTTLEWDKIKSPNPDEV 85 Q+++A++ L + S E+E F +L RYL ++ +EW KI++P + V Sbjct: 10 QLKSAVDGLTEMS----------ESEKSGFISLVSRYLSGEAQ--HIEWSKIQTPTDEIV 57 Query: 86 VKYEIISQQPENVSNLSKLAVLKL----NGGLGTSMGCVGPKSVIEVREGNTFLDLSVRQ 141 V YE ++ ++V+ L + NGGLGT+MGC GPKSVIEVR+G TFLDL V Q Sbjct: 58 VPYEKMTPVSQDVAETKNLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRDGLTFLDLIVIQ 117 Query: 142 IEYLNRQYDSDVPLLLMNSFNTDKDTEHLIKKYSANRIRIRSFNQSRFPRVYKDSLLPVP 201 IE LN +Y VPL+LMNSFNT DT +++KY+ + + I +FNQS++PRV D +P P Sbjct: 118 IENLNNKYGCKVPLVLMNSFNTHDDTHKIVEKYTNSNVDIHTFNQSKYPRVVADEFVPWP 177 Query: 202 TEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDNLGATVDLKILNHMI 261 ++ + + WYPPGHGD+F +L SG+LD ++QG+E +FV+N DNLGA VDL IL H+I Sbjct: 178 SKGKTDKEGWYPPGHGDVFPALMNSGKLDTFLSQGKEYVFVANSDNLGAIVDLTILKHLI 237 Query: 262 ETGAEYIMELTDKTRADVKGGTLISYDGQVRLLEVAQVPKEHIDEFKNIRKFTNFNTNNL 321 + EY ME+T KT ADVKGGTLISY+G+V+LLE+AQVP EH++EFK+I KF FNTNNL Sbjct: 238 QNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNL 297 Query: 322 WINLKAVKRLIESSNLEMEIIPNQKTITRDGHEINVLQLETACGAAIRHFDGAHGVVVPR 381 W+NLKA+K+L+E+ L+MEIIPN K + DG + VLQLETA GAAIR FD A GV VPR Sbjct: 298 WVNLKAIKKLVEADALKMEIIPNPKEV--DG--VKVLQLETAAGAAIRFFDNAIGVNVPR 353 Query: 382 SRFLPVKTCSDLLLVKSDLFRLEHGSLKLDPSRFGP-NPLIKLGSHFKKVSGFNARIPHI 440 SRFLPVK SDLLLV+SDL+ L G + + +R P NP I+LG FKKV+ F +R I Sbjct: 354 SRFLPVKASSDLLLVQSDLYTLVDGFVTRNKARTNPSNPSIELGPEFKKVATFLSRFKSI 413 Query: 441 PKIVELDHLTITGNVFLGKDVTLRGTVIIVCSDGHKIDIPNGSILENVVVTG 492 P IVELD L ++G+V+ G + L+G V + G K++IP+ +++EN + G Sbjct: 414 PSIVELDSLKVSGDVWFGSSIVLKGKVTVAAKSGVKLEIPDRAVVENKNING 465 >3R2W-A nrPDB Length = 528 Score = 627 bits (1617), Expect = e-180, Method: Composition-based stats. Identities = 268/498 (53%), Positives = 363/498 (72%), Gaps = 26/498 (5%) Query: 23 AASQMRNALNKLADSSK-------LDDAARAKFEN---ELDSFFTLFRRYLVEKSSRTTL 72 ASQ + + + + S L A+ +FE+ +LD F LF R+L EK ++ Sbjct: 36 GASQFQEVIRQELELSVKKELEKILTTASSHEFEHTKKDLDGFRKLFHRFLQEKGP--SV 93 Query: 73 EWDKIKSPNPDEVVKYEIISQQ--PENVSN-LSKLAVLKLNGGLGTSMGCVGPKSVIEVR 129 +W KI+ P D + YE I + P+N+S+ L+KL V+KLNGGLGTSMGC GPKS+I VR Sbjct: 94 DWGKIQRPPEDSIQPYEKIKARGLPDNISSVLNKLVVVKLNGGLGTSMGCKGPKSLIGVR 153 Query: 130 EGNTFLDLSVRQIEYLNRQYDSDVPLLLMNSFNTDKDTEHLIKKYSANRIRIRSFNQSRF 189 NTFLDL+V+QIE+LN+ Y++DVPL+LMNSFNTD+DT+ +++KY+ R++I +FNQSR+ Sbjct: 154 NENTFLDLTVQQIEHLNKTYNTDVPLVLMNSFNTDEDTKKILQKYNHCRVKIYTFNQSRY 213 Query: 190 PRVYKDSLLPVPTEYDSP---LDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGD 246 PR+ K+SLLPV + +AWYPPGHGD++ S + SG LD I +G+E +FVSN D Sbjct: 214 PRINKESLLPVAKDVSYSGENTEAWYPPGHGDIYASFYNSGLLDTFIGEGKEYIFVSNID 273 Query: 247 NLGATVDLKILNHMIE----TGAEYIMELTDKTRADVKGGTLISYDGQVRLLEVAQVPKE 302 NLGATVDL ILNH++ E++ME+T+KTRADVKGGTL Y+G++RL+E+AQVPK Sbjct: 274 NLGATVDLYILNHLMNPPNGKRCEFVMEVTNKTRADVKGGTLTQYEGKLRLVEIAQVPKA 333 Query: 303 HIDEFKNIRKFTNFNTNNLWINLKAVKRLIESSNLEMEIIPNQKTITRDGHEINVLQLET 362 H+DEFK++ KF FNTNNLWI+L AVKRL E + ++MEII N KT+ DG +NV+QLET Sbjct: 334 HVDEFKSVSKFKIFNTNNLWISLAAVKRLQEQNAIDMEIIVNAKTL--DGG-LNVIQLET 390 Query: 363 ACGAAIRHFDGAHGVVVPRSRFLPVKTCSDLLLVKSDLFRLEHGSLKLDPSRFGPN-PLI 421 A GAAI+ F+ + G+ VPRSRFLPVKT SDLLLV S+L+ L GSL + R P PL+ Sbjct: 391 AVGAAIKSFENSLGINVPRSRFLPVKTTSDLLLVMSNLYSLNAGSLTMSEKREFPTVPLV 450 Query: 422 KLGSHFKKVSGFNARIPHIPKIVELDHLTITGNVFLGKDVTLRGTVIIVCSDGHKIDIPN 481 KLGS F KV + R IP ++ELDHLT++G+V GK+V+L+GTVII+ + G +IDIP Sbjct: 451 KLGSSFTKVQDYLRRFESIPDMLELDHLTVSGDVTFGKNVSLKGTVIIIANHGDRIDIPP 510 Query: 482 GSILENVVVTGNLQILEH 499 G++LEN +V+GNL+IL+H Sbjct: 511 GAVLENKIVSGNLRILDH 528 >3GUE-A nrPDB Length = 484 Score = 564 bits (1454), Expect = e-161, Method: Composition-based stats. Identities = 187/477 (39%), Positives = 272/477 (57%), Gaps = 25/477 (5%) Query: 35 ADSSKLDDAARAKFENELDSFFTLFRRYLVEKSSRTTLEWDKIKSPNPDEVVKY-EIISQ 93 A + L+ + E E L + LV K + KS +P E + + + I Sbjct: 11 AALACLEKMQASGVE-EKCIHIFLIQHALVRKGETGYIP---EKSISPVESLPFLQGIET 66 Query: 94 QPENVSNLSKLAVLKLNGGLGTSMGCVGPKSVIEVREGNTFLDLSVRQIEYLNRQYDSDV 153 + EN + L + VLKLNGGLGT MG GPKS+++V+ G TFLD + Q+E+ + + +V Sbjct: 67 KGENTALLRQAVVLKLNGGLGTGMGLNGPKSLLQVKNGQTFLDFTALQLEHFRQVRNCNV 126 Query: 154 PLLLMNSFNTDKDTEHLIKKYSANRIRI---RSFNQSRFPRVYKDSLLPVPTEYDSPLDA 210 P +LMNSF+T +T++ ++KY Q+R P++ +D+ PV E D P Sbjct: 127 PFMLMNSFSTSGETKNFLRKYPTLYEVFDSDIELMQNRVPKIRQDNFFPVTYEAD-PTCE 185 Query: 211 WYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDNLGATVDLKILNHMIETGAEYIME 270 W PPGHGD++ L+ SG+LD L+ +G +F+SNGDNLGAT+D+++L++M E ++ME Sbjct: 186 WVPPGHGDVYTVLYSSGKLDYLLGKGYRYMFISNGDNLGATLDVRLLDYMHEKQLGFLME 245 Query: 271 LTDKTRADVKGGTLISYD------GQVR----LLEVAQVPKEHIDEFKNIRKFTNFNTNN 320 + +T +D KGG L D GQ R L E AQ PKE D F+NI K FNTNN Sbjct: 246 VCRRTESDKKGGHLAYKDVIDETTGQTRRRFVLRESAQCPKEDEDSFQNIAKHCFFNTNN 305 Query: 321 LWINLKAVKRLIES--SNLEMEIIPNQKTIT-RDGHEINVLQLETACGAAIRHFDGAHGV 377 +WINL +K++++ L + ++ N KT+ +D V QLE A GAAI FD + V Sbjct: 306 IWINLMELKKMMDEQLGVLRLPVMRNPKTVNPQDSQSTKVYQLEVAMGAAISLFDRSEAV 365 Query: 378 VVPRSRFLPVKTCSDLLLVKSDLFRL-EHGSLKLDPSRFGPNPLIKL-GSHFKKVSGFNA 435 VVPR RF PVKTCSDLL ++SD +++ E L L R G P I L G H+K + GF Sbjct: 366 VVPRERFAPVKTCSDLLALRSDAYQVTEDQRLVLCEERNGKPPAIDLDGEHYKMIDGFEK 425 Query: 436 RIP-HIPKIVELDHLTITGNVFLGKDVTLRGTVIIVCSDGHKIDIPNGSILENVVVT 491 + +P + + LT+ G V G DV++RG V+I + I +G +L+N VV Sbjct: 426 LVKGGVPSLRQCTSLTVRGLVEFGADVSVRGNVVIKNLKEEPLIIGSGRVLDNEVVV 482 >4M2B-A nrPDB Length = 505 Score = 530 bits (1366), Expect = e-151, Method: Composition-based stats. Identities = 167/491 (34%), Positives = 265/491 (53%), Gaps = 30/491 (6%) Query: 27 MRNALNKLADSSKLDDAARAKFENELDSFFTLFRRY-LVEKSSRTTLEWDKIKSPNPDEV 85 M N + L+ +++ + T ++ +V K ++ I D + Sbjct: 1 MENDMKSLSAAAQACVKKMRDAKVNEACIRTFIAQHVMVSKGETGSIPDSAIM--PVDSL 58 Query: 86 VKYEIISQQPENVSNLSKLAVLKLNGGLGTSMGCVGPKSVIEVREGNTFLDLSVRQIEYL 145 + ++ + +N + L VLKLNGGLGT MG K+++EV++G TFLD + Q++YL Sbjct: 59 DALDSLTIECDN-AVLQSTVVLKLNGGLGTGMGLCDAKTLLEVKDGKTFLDFTALQVQYL 117 Query: 146 NRQYDSDVPLLLMNSFNTDKDTEHLIKKYSANRIRI----RSFNQSRFPRVYKDSLLPVP 201 + + +LM+SFNT T+ +K ++ Q++ P++ +D+L P Sbjct: 118 RQHCSEHLRFMLMDSFNTSASTKSFLKARYPWLYQVFDSEVELMQNQVPKILQDTLEPAA 177 Query: 202 TEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDNLGATVDLKILNHMI 261 ++P W PPGHGD++ +L+ SG+L L+ QG +FVSNGDNLGAT+D ++L +M Sbjct: 178 WA-ENPAYEWAPPGHGDIYTALYGSGKLQELVEQGYRYMFVSNGDNLGATIDKRVLAYME 236 Query: 262 ETGAEYIMELTDKTRADVKGGTLIS-------YDGQV-------RLLEVAQVPKEHIDEF 307 + +++ME+ +T +D KGG L DGQ L E AQ PK ++ F Sbjct: 237 KEKIDFLMEVCRRTESDKKGGHLARQTVYVKGKDGQPDAEKRVLDLRESAQCPKADMESF 296 Query: 308 KNIRKFTNFNTNNLWINLKAVKRLIE--SSNLEMEIIPNQKTI-TRDGHEINVLQLETAC 364 ++I K++ FNTNNLWI L + ++ L + +I N+KT+ + + V QLETA Sbjct: 297 QDINKYSFFNTNNLWIRLPVLLETMQEHGGTLPLPVIRNEKTVDSSNSASPKVYQLETAM 356 Query: 365 GAAIRHFDGAHGVVVPRSRFLPVKTCSDLLLVKSDLFRL-EHGSLKLDPSRFGPNPLIKL 423 GAAI F+ A +VVPRSRF PVKTC+DLL ++SD + + + L LD G P++ L Sbjct: 357 GAAIAMFESASAIVVPRSRFAPVKTCADLLALRSDAYVVTDDFRLVLDDRCHGHPPVVDL 416 Query: 424 GS-HFKKVSGFNARIPH-IPKIVELDHLTITGNVFLGKDVTLRGTVIIVCSD-GHKIDIP 480 S H+K ++GF + H +P +VE +T+ G V G L GTV I +D IP Sbjct: 417 DSAHYKMMNGFEKLVQHGVPSLVECKRVTVKGLVQFGAGNVLTGTVTIENTDSASAFVIP 476 Query: 481 NGSILENVVVT 491 +G+ L + + Sbjct: 477 DGAKLNDTTAS 487 >1JV1-A nrPDB Length = 505 Score = 329 bits (844), Expect = 1e-90, Method: Composition-based stats. Identities = 64/326 (19%), Positives = 136/326 (41%), Gaps = 29/326 (8%) Query: 32 NKLADSSKLDDAARAKFEN--ELDSFFTLFRRYLVEKSSRTTLEWDKIKSPNPDEVV--- 86 N+L ++ +++ A + N EL+ FF + S + + D P P EV+ Sbjct: 23 NELEEAQQVELYAELQAMNFEELNFFFQKAIEGFNQSSHQKNV--DARMEPVPREVLGSA 80 Query: 87 ---KYEIISQQPENVSNL--SKLAVLKLNGGLGTSMGCVGPKSVIEV--REGNTFLDLSV 139 + ++ + + E + + +K+AVL L GG GT +G PK + +V T + Sbjct: 81 TRDQDQLQAWESEGLFQISQNKVAVLLLAGGQGTRLGVAYPKGMYDVGLPSRKTLFQIQA 140 Query: 140 RQIEYLNRQYD------SDVPLLLMNSFNTDKDTEHLIKK---YSANRIRIRSFNQSRFP 190 +I L + + +P +M S T + T+ K + + + F Q P Sbjct: 141 ERILKLQQVAEKYYGNKCIIPWYIMTSGRTMESTKEFFTKHKYFGLKKENVIFFQQGMLP 200 Query: 191 RVYKDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDNLGA 250 + D + + + + P G+G L+ +L ++ + +G + V DN+ Sbjct: 201 AMSFDGKIILEEKNKVSM---APDGNGGLYRALAAQNIVEDMEQRGIWSIHVYCVDNILV 257 Query: 251 TV-DLKILNHMIETGAEYIMELTDKTRADVKGGTLISYDGQVRLLEVAQVPKEHIDEFKN 309 V D + + I+ GA+ ++ +KT G + DG +++E +++ + + Sbjct: 258 KVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRVDGVYQVVEYSEISLATAQKRSS 317 Query: 310 IRK--FTNFNTNNLWINLKAVKRLIE 333 + F N N + + ++ ++ Sbjct: 318 DGRLLFNAGNIANHFFTVPFLRDVVN 343 >1VM8-A nrPDB Length = 534 Score = 326 bits (835), Expect = 2e-89, Method: Composition-based stats. Identities = 67/327 (20%), Positives = 139/327 (42%), Gaps = 31/327 (9%) Query: 32 NKLADSSKLDDAARAKFEN--ELDSFFTLFRRYLVEKSSRTTLE-WDKIKSPNPDEVV-- 86 N+L+++ +++ + N EL+SFF R+ + E + E D P P +V+ Sbjct: 35 NELSEAQQMELYMELQAMNFEELNSFF---RKAIGEFDRSSHQEKVDARMEPVPRQVLGS 91 Query: 87 ----KYEIISQQPENVSNL--SKLAVLKLNGGLGTSMGCVGPKSVIEV--REGNTFLDLS 138 + ++ + + E +S + +K+AVL L GG GT +G PK + +V T + Sbjct: 92 ATRDQEQLQAWESEGLSQISQNKVAVLLLAGGQGTRLGVSYPKGMYDVGLPSHKTLFQIQ 151 Query: 139 VRQIEYLNRQYD------SDVPLLLMNSFNTDKDTEHLIKK---YSANRIRIRSFNQSRF 189 +I L + + +P +M S T + T+ K + + + F Q Sbjct: 152 AERILKLQQLAEKHHGNKCTIPWYIMTSGRTMESTKEFFTKHKFFGLKKENVVFFQQGML 211 Query: 190 PRVYKDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDNLG 249 P + D + + + + P G+G L+ +L ++ + +G + V DN+ Sbjct: 212 PAMSFDGKIILEEKNKVSM---APDGNGGLYRALAAQNIVEDMEQRGICSIHVYCVDNIL 268 Query: 250 ATV-DLKILNHMIETGAEYIMELTDKTRADVKGGTLISYDGQVRLLEVAQVPKEHIDEFK 308 V D + + I+ GA+ ++ +KT G + DG +++E +++ Sbjct: 269 VKVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRVDGVYQVVEYSEISLATAQRRS 328 Query: 309 NIRK--FTNFNTNNLWINLKAVKRLIE 333 + + F N N + + +K ++ Sbjct: 329 SDGRLLFNAGNIANHFFTVPFLKDVVN 355 >4BMA-A nrPDB Length = 509 Score = 280 bits (716), Expect = 1e-75, Method: Composition-based stats. Identities = 60/317 (18%), Positives = 125/317 (39%), Gaps = 30/317 (9%) Query: 37 SSKLDDAARAKFENELDSFFTLFRRYLVEKS--SRTTLEWDKIKSPNPDEVV-------K 87 +L R++ ++L SF + L +K+ + P PD Sbjct: 51 VDELQTGERSQLFHQLSSFDPVRINELADKALNPPKADDGPASLEPLPDIATASILDSDP 110 Query: 88 YEIISQQPENVSNL--SKLAVLKLNGGLGTSMGCVGPKSVIEV--REGNTFLDLSVRQIE 143 ++ E + + +K+AV+ + GG GT +G PK ++ + + +I Sbjct: 111 KDLEQWYEEGLKLVAGNKVAVVLMAGGQGTRLGSSAPKGCFDIGLPSHKSLFQIQAERIA 170 Query: 144 YLN------RQYDSDVPLLLMNSFNTDKDTEHLI---KKYSANRIRIRSFNQSRFPRVYK 194 L ++ +P +M S T K TE K + N+ + F Q P + Sbjct: 171 KLQLLAQRISGKEAVIPWYVMTSGPTRKPTEEFFEQHKYFGLNKSDVIIFEQGVLPCISN 230 Query: 195 DSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDN-LGATVD 253 + + + +++ A P G+G ++++L SG + + +G E + DN L D Sbjct: 231 EGKILMESKFKV---AVAPDGNGGIYQALLTSGVREDMRKRGIEHIHTYCVDNCLVKVAD 287 Query: 254 LKILNHMIETGAEYIMELTDKTRADVKGGTLISYDGQVRLLEVAQVPKEHID----EFKN 309 + + ++ K A G ++ +G+ ++E +++ KE + + + Sbjct: 288 PVFIGFAASKQVDIATKVVRKRNATESVGLILQKNGKPDVVEYSEIDKETAEAKDPKQPD 347 Query: 310 IRKFTNFNTNNLWINLK 326 + KF N N + + K Sbjct: 348 VLKFRAANIVNHYYSFK 364 >2YQJ-A nrPDB Length = 486 Score = 194 bits (493), Expect = 7e-50, Method: Composition-based stats. Identities = 57/335 (17%), Positives = 128/335 (38%), Gaps = 32/335 (9%) Query: 26 QMRNALNKLADSSKLDDAARAKFENELDSFFTLFRRYLVEKSSRTTLEWDKIKSPNPDEV 85 Q+ + L + + + E + + + + S + + + PN Sbjct: 20 QLFQYYDSLTIDQQQEFIDQLSTIEEPAKLISTVEQAI-QFSQTNSTSRNFTQLPNEQTA 78 Query: 86 VKYEIISQQPENVSNLS-------KLAVLKLNGGLGTSMGCVGPKSV--IEVREGNTFLD 136 ++ +N + L ++AVL + GG GT +G PK IE+ + Sbjct: 79 STLDLSKDILQNWTELGLKAIGNGEVAVLLMAGGQGTRLGSSAPKGCFNIELPSQKSLFQ 138 Query: 137 LSVRQI--------EYLNRQYDSDVPLLLMNSFNTDKDTEHLI---KKYSANRIRIRSFN 185 + +I +YL + +M S T TE + N ++ FN Sbjct: 139 IQAEKILKIEQLAQQYLKSTKKPIINWYIMTSGPTRNATESFFIENNYFGLNSHQVIFFN 198 Query: 186 QSRFPRVY-KDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSN 244 Q P + + + + + P G+G L+++L +G LD L ++G + + + Sbjct: 199 QGTLPCFNLQGNKILLELKNSICQS---PDGNGGLYKALKDNGILDDLNSKGIKHIHMYC 255 Query: 245 GDN-LGATVDLKILNHMIETGAEYIMELTDKTRADVKGGTLI--SYDGQVRLLEVAQVPK 301 DN L D + I + ++ K A+ G ++ + + ++E +++ + Sbjct: 256 VDNCLVKVADPIFIGFAIAKKFDLATKVVRKRDANESVGLIVLDQDNQKPCVIEYSEISQ 315 Query: 302 EHIDEF--KNIRK--FTNFNTNNLWINLKAVKRLI 332 E ++ ++ K N N + +++ + ++I Sbjct: 316 ELANKKDPQDSSKLFLRAANIVNHYYSVEFLNKMI 350 >3OC9-A nrPDB Length = 405 Score = 141 bits (355), Expect = 8e-34, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 112/259 (43%), Gaps = 18/259 (6%) Query: 103 KLAVLKLNGGLGTSMGCVGPKSVIEVREG--NTFLDLSVRQIEYLNR-------QYDSDV 153 K A++ GG G+ +G PK + + + ++ ++ L Q + + Sbjct: 35 KTALITPAGGQGSRLGFEHPKGMFVLPFEIPKSIFQMTSERLLRLQELASEYSHQKNVMI 94 Query: 154 PLLLMNSFNTDKDTEHLIK---KYSANRIRIRSFNQSRFPRVYKDSLLPVPTEYDSPLDA 210 LM + T ++ + K + + +I F Q P V + + + + Sbjct: 95 HWFLMTNEETIEEINNYFKEHQYFGLSSEQIHCFPQGMLPVVDFNGKILYEKKDKPYM-- 152 Query: 211 WYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDNLGAT-VDLKILNHMIETGAEYIM 269 P GHG LF++L +G L+ + +G + N DN+ VD ++ +M +E + Sbjct: 153 -APNGHGGLFKALKDNGILEFMNEKGIKYSVAHNVDNILCKDVDPNMIGYMDLLQSEICI 211 Query: 270 ELTDKTRADVKGGTLISYDGQVRLLEVAQVPKEHIDEFKNIRKFTNFNTNNLWINLKAVK 329 ++ K + K G L+ +++++E ++ E +++ + +F +N ++ IN + Sbjct: 212 KIVKKGFKEEKVGVLVKEQERIKVVEYTELTDE-LNKQLSNGEF-IYNCGHISINGYSTS 269 Query: 330 RLIESSNLEMEIIPNQKTI 348 L +++ ++ +K + Sbjct: 270 FLEKAAEYQLPYHIAKKKV 288 >4BQH-A nrPDB Length = 549 Score = 135 bits (340), Expect = 4e-32, Method: Composition-based stats. Identities = 71/349 (20%), Positives = 123/349 (35%), Gaps = 60/349 (17%) Query: 19 TNSVAASQMR---NALNKLADSSKLDDAARAKFENELDSFFTLFRRYLVEKSSRTTLEWD 75 TN +A R + L + + SK A DSFF + R Sbjct: 43 TNELAGVDFRHFNDVLRESLEISKNCSTASLAEPPAKDSFFD-----ISSVDRRR----G 93 Query: 76 KIKSPNPDEVVKYEIISQQPENVSNLSKLAVLKLNGGLGTSMGCVGPKSVI---EVREGN 132 + K E V Y+ I ++A L L GG GT +G PK +++ Sbjct: 94 QAKRIKNLEAVGYKAI--------QKGQIAFLILAGGSGTRLGFDKPKGFFTCDGLQQRK 145 Query: 133 TFLDLSVRQIEYLN--------RQYDSDVPLLLMNSFNTDKDTEHLIK---KYSANRIRI 181 + + +I + V LL+M S D +T+ + + R ++ Sbjct: 146 SLFMMHCEKIRRRQEIAESISGSGRKARVQLLVMTSGQNDAETQRFFEENSYFGLEREQV 205 Query: 182 RSFNQSRFPRVYKD-SLLPVPTEYDSPLDAWYPPGHGDLFESLHV--------------S 226 F QS P ++ + + P G+G +F +L Sbjct: 206 HFFAQSSVPCYDENTGRIIMENRGRICA---APGGNGAVFAALAAPRATKDKDGTLQVKE 262 Query: 227 GELDALIAQGREILFVSNGDNLGATV-DLKILNHMIETGAEYIMELTDKTRADVKGGTLI 285 L L G + + N DNL A V D + + IE A +++ K D + G + Sbjct: 263 SLLQHLRKLGIAYVQIGNIDNLLANVADPVFIGYAIEEEAHVVVKTCPKRGPDERVGVFV 322 Query: 286 SYDGQVRLLEVAQVPK--EHIDEFKNIRKFTNFNTNN-----LWINLKA 327 G+ ++E ++ + ID+ KF N ++ +++L A Sbjct: 323 RASGKWGVVEYTEIGDRAKEIDDATGELKFNCANISSNLCSLHFMSLAA 371 >3OH0-A nrPDB Length = 641 Score = 69.0 bits (167), Expect = 5e-12, Method: Composition-based stats. Identities = 66/342 (19%), Positives = 112/342 (32%), Gaps = 45/342 (13%) Query: 89 EIISQQPENVSNLSKLAVLKLNGGLGTSMGCVGPKSVIEVREGNTFLDLSVRQIEYLNRQ 148 E + + + L K + + GGLG +G K + V T + + R Sbjct: 100 ERTALENAGTAMLCKTVFVLVAGGLGERLGYSSIKVSLPVETA-TNTTYLAYYLRWAQRV 158 Query: 149 YDSDVPLLLMNSFNTDKDTEHLIKKYSANRIRIRSFNQSRFPRVYKDSLLPVPTEYDSPL 208 +VP ++M S +T T L+++ + Q + DS + + ++ Sbjct: 159 GGKEVPFVIMTSDDTHDRTLQLLRELQLEVPNLHVLKQGQVFCF-ADSAAHLALD-ETGK 216 Query: 209 DAWYPPGHGDLFESLHV------------------SGELDALIAQGREILFVSNGDNLGA 250 P GHGD+ ++ ++ +A G E + N GA Sbjct: 217 LLRKPHGHGDVHSLIYNATVKRDVVPDSGDGTATAQPLVNDWLAAGYESIVFIQDTNAGA 276 Query: 251 TVDLKI-LNHMIETGAEYIMELTDKTRADVKGGTLISY---DGQVRLLEVAQ-------- 298 T+ + I L E + + G L G L+ + Sbjct: 277 TITIPISLALSAEHSLDMNFTCIPRV-PKEPIGLLCRTKKNSGDPWLVANVEYNVFAEVS 335 Query: 299 --VPKEHIDEFKNIRKFTNF--NTNNLWINLKA-VKRLIESSNLEMEIIPNQKTITRDGH 353 + K+ DE + F+ F + N L L + V RL ES + E I N K Sbjct: 336 RALNKDGGDEVSDPTGFSPFPGSVNTLVFKLSSYVDRLRESHGIVPEFI-NPKYSDETRR 394 Query: 354 EINV-LQLETACGAAIRHFD----GAHGVVVPRSRFLPVKTC 390 ++E+ F G V R + PVK Sbjct: 395 SFKKPARIESLMQDIALLFSEDDYRVGGTVFERFSYQPVKNS 436 >4PJ1-A nrPDB Length = 558 Score = 34.7 bits (78), Expect = 0.093, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 45/123 (36%), Gaps = 12/123 (9%) Query: 77 IKSPNPDEVVKYEIISQQPENVSNLSKLAVLKLNGG------LGTSMGCVGPKSVIEVRE 130 + + + + S+ ++++A + NG + +M VG K VI V++ Sbjct: 146 VMLAVDAVIAELKKQSKPVTTPEEIAQVATISANGDKEIGNIISDAMKKVGRKGVITVKD 205 Query: 131 GNTFLDLSVRQIEYLNRQYDSDVPLLLMNSFNTDKDTE-HLIKKYSANRIRIRSFNQSRF 189 G T D + IE + P + NT K + Y + S QS Sbjct: 206 GKTLND-ELEIIEGMKFDRGYISPYFI----NTSKGQKCEFQDAYVLLSEKKISSIQSIV 260 Query: 190 PRV 192 P + Sbjct: 261 PAL 263 >1JNE-A nrPDB Length = 420 Score = 34.7 bits (78), Expect = 0.093, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 44/122 (36%), Gaps = 10/122 (8%) Query: 193 YKDSLLPV--PTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDNLGA 250 D L P P E D ++P G D L+ +++ ++QG F SN NLG Sbjct: 221 TFDFLTPARNPEEADYSAPIYHPDGSKDRLAHLNADFQVEYWLSQG----FPSNKINLGV 276 Query: 251 TVDLKILNHMIETGAEYIMELTDKTRADVKGGTLISYDGQVRLLEVAQVPKEHIDEFKNI 310 ++G E + + +T G G LL A++ + + Sbjct: 277 ATYGNAWKLTKDSGLE-GVPVVPETSGPAPEGFQSQKPG---LLSYAEICGKLSNPQNQF 332 Query: 311 RK 312 K Sbjct: 333 LK 334 >4MYB-A nrPDB Length = 261 Score = 32.8 bits (73), Expect = 0.35, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 17/36 (47%) Query: 101 LSKLAVLKLNGGLGTSMGCVGPKSVIEVREGNTFLD 136 +S V+ G+GT M PK ++ G T LD Sbjct: 1 VSNKYVIIPAAGIGTRMQLDIPKQYYKLNNGKTILD 36 >1Y7H-A nrPDB Length = 268 Score = 32.4 bits (72), Expect = 0.54, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 39/108 (36%), Gaps = 19/108 (17%) Query: 123 KSVIEVREGN-TFLDLSV-----RQIEYLNRQYDSDVPLL-LMNSFNTDKDT----EHL- 170 K ++E T LDL+ R+IE L YD +PL+ LM S + D+ L Sbjct: 24 KPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLMELMESLSADEKVILVGHSLG 83 Query: 171 -------IKKYSANRIRIRSFNQSRFPRVYKDSLLPVPTEYDSPLDAW 211 ++KY V+ S + +P + W Sbjct: 84 GMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENW 131 >4CVH-A nrPDB Length = 411 Score = 32.0 bits (71), Expect = 0.65, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 31/82 (37%), Gaps = 5/82 (6%) Query: 102 SKLAVLKLNGGLGTSMGCVGPKSVIEVREGNTFLDLSVRQIEYLNRQYDSDVPLLLMNSF 161 +A + GG G MG PK + E L ++ L R +++ + Sbjct: 5 QAVAAVLPAGGCGERMGVPTPKQFCPILER----PLISYTLQALERVCWIK-DIVVAVTG 59 Query: 162 NTDKDTEHLIKKYSANRIRIRS 183 + + +I+KY RI + Sbjct: 60 ENMEVMKSIIQKYQHKRISLVE 81 >5H7J-A nrPDB Length = 743 Score = 30.8 bits (68), Expect = 1.3, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 35/95 (36%), Gaps = 4/95 (4%) Query: 56 FTLFRRYLVEKSSRTTLEWDKIKSPNPDEVVKYEIISQQPENVSNLSKLAVLKLNGGLGT 115 T + KS + + P PDE+ PE K KL Sbjct: 472 ITKSSPMVEGKSPNRHNRFYIVVEPMPDEIYNAIKEGIIPEGRVKNPKEVAKKLA---EL 528 Query: 116 SMGCVGPKSVIEVREGNTFLDLSVRQIEYLNRQYD 150 M + ++++ GN F+D + + ++YLN D Sbjct: 529 GMDYEIARGIVDIYNGNMFIDNT-KGVQYLNEVMD 562 >3PMO-A nrPDB Length = 372 Score = 30.5 bits (67), Expect = 1.9, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 453 GNVFLGKDVTLRGTVIIVCSDGHKIDIPNGSILENVV-VTGNLQILEH 499 G V +G DV + I I NG L+N + + N+QI +H Sbjct: 221 GGVTIGDDVEIGANTTIDRGALSDTLIGNGVKLDNQIMIAHNVQIGDH 268 >5X7Y-A nrPDB Length = 177 Score = 29.7 bits (65), Expect = 2.7, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 44/131 (33%), Gaps = 14/131 (10%) Query: 217 GDLFESLHVSGELDALIAQGREILFVSNGDNLGATVDLKILNHMIETGAEYIMELTDKTR 276 GD + L S + + G +FV + + L + ++ M +++ Sbjct: 21 GDWYSILLASDIKEKIEENGSMRVFVKDIEVLS---NSSLIFTMHTKVNGKCTKISLICN 77 Query: 277 ADVKGGTLISYDGQVRLLEVAQVPKEHIDEFKNIRKFTNFNTNNLWINLKAVKRLIESSN 336 K G L + + E + F+ NN +N + +L+E Sbjct: 78 KTEKDGEYDVVHDGYNLFRIIETAYED---------YIIFHLNN--VNQEQEFQLMELYG 126 Query: 337 LEMEIIPNQKT 347 + ++ P K Sbjct: 127 RKPDVSPKVKE 137 >1BYG-A nrPDB Length = 278 Score = 28.9 bits (63), Expect = 5.3, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 4/67 (5%) Query: 166 DTEHLIKKYSANRIRIRSFNQSRFPRVYKDSLLP-VPTEYDSPLDAWYPPGHGDLFESLH 224 T+ + + I SF + +PR+ ++P V Y PP ++E + Sbjct: 192 STKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPA---VYEVMK 248 Query: 225 VSGELDA 231 LDA Sbjct: 249 NCWHLDA 255 >1SVT-O nrPDB Length = 97 Score = 28.1 bits (61), Expect = 9.4, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 15/31 (48%) Query: 460 DVTLRGTVIIVCSDGHKIDIPNGSILENVVV 490 + L G+ + G + + NG ILEN V Sbjct: 24 GIVLTGSAAAKSTRGEVLAVGNGRILENGEV 54 >3PS9-A nrPDB Length = 676 Score = 28.1 bits (61), Expect = 9.9, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 20/54 (37%), Gaps = 1/54 (1%) Query: 212 YPPGHGDLFESLHVSGELDALIAQGREILFVSNGDNLGATVDLKILNHMIETGA 265 YP G G L + L+ QG +I + N D +LN + A Sbjct: 408 YPQG-GWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQA 460 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.309 0.130 0.328 Lambda K H 0.267 0.0399 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 17,381,832 Number of Sequences: 36641 Number of extensions: 667851 Number of successful extensions: 2072 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 26 Number of HSP's successfully gapped in prelim test: 20 Number of HSP's that attempted gapping in prelim test: 1949 Number of HSP's gapped (non-prelim): 47 length of query: 499 length of database: 10,336,785 effective HSP length: 101 effective length of query: 398 effective length of database: 6,636,044 effective search space: 2641145512 effective search space used: 2641145512 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 61 (28.1 bits)