BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P32842 (164 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6O7U-o nrPDB 321 8e-89 5TJ5-D nrPDB 285 4e-78 6O7T-g nrPDB 172 6e-44 5VOZ-R nrPDB 52 1e-07 2BL2-A nrPDB 50 4e-07 5Y5Z-O nrPDB 38 0.002 6FKH-S nrPDB 32 0.11 3IA7-A nrPDB 28 2.5 4BEM-A nrPDB 27 4.4 2XQS-A nrPDB 27 4.5 >6O7U-o nrPDB Length = 164 Score = 321 bits (823), Expect = 8e-89, Method: Compositional matrix adjust. Identities = 164/164 (100%), Positives = 164/164 (100%) Query: 1 MSTQLASNIYAPLYAPFFGFAGCAAAMVLSCLGAAIGTAKSGIGIAGIGTFKPELIMKSL 60 MSTQLASNIYAPLYAPFFGFAGCAAAMVLSCLGAAIGTAKSGIGIAGIGTFKPELIMKSL Sbjct: 1 MSTQLASNIYAPLYAPFFGFAGCAAAMVLSCLGAAIGTAKSGIGIAGIGTFKPELIMKSL 60 Query: 61 IPVVMSGILAIYGLVVAVLIAGNLSPTEDYTLFNGFMHLSCGLCVGFACLSSGYAIGMVG 120 IPVVMSGILAIYGLVVAVLIAGNLSPTEDYTLFNGFMHLSCGLCVGFACLSSGYAIGMVG Sbjct: 61 IPVVMSGILAIYGLVVAVLIAGNLSPTEDYTLFNGFMHLSCGLCVGFACLSSGYAIGMVG 120 Query: 121 DVGVRKYMHQPRLFVGIVLILIFSEVLGLYGMIVALILNTRGSE 164 DVGVRKYMHQPRLFVGIVLILIFSEVLGLYGMIVALILNTRGSE Sbjct: 121 DVGVRKYMHQPRLFVGIVLILIFSEVLGLYGMIVALILNTRGSE 164 >5TJ5-D nrPDB Length = 147 Score = 285 bits (730), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 147/147 (100%), Positives = 147/147 (100%) Query: 17 FFGFAGCAAAMVLSCLGAAIGTAKSGIGIAGIGTFKPELIMKSLIPVVMSGILAIYGLVV 76 FFGFAGCAAAMVLSCLGAAIGTAKSGIGIAGIGTFKPELIMKSLIPVVMSGILAIYGLVV Sbjct: 1 FFGFAGCAAAMVLSCLGAAIGTAKSGIGIAGIGTFKPELIMKSLIPVVMSGILAIYGLVV 60 Query: 77 AVLIAGNLSPTEDYTLFNGFMHLSCGLCVGFACLSSGYAIGMVGDVGVRKYMHQPRLFVG 136 AVLIAGNLSPTEDYTLFNGFMHLSCGLCVGFACLSSGYAIGMVGDVGVRKYMHQPRLFVG Sbjct: 61 AVLIAGNLSPTEDYTLFNGFMHLSCGLCVGFACLSSGYAIGMVGDVGVRKYMHQPRLFVG 120 Query: 137 IVLILIFSEVLGLYGMIVALILNTRGS 163 IVLILIFSEVLGLYGMIVALILNTRGS Sbjct: 121 IVLILIFSEVLGLYGMIVALILNTRGS 147 >6O7T-g nrPDB Length = 160 Score = 172 bits (436), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 86/153 (56%), Positives = 120/153 (78%), Gaps = 2/153 (1%) Query: 12 PLYAPFFGFAGCAAAMVLSCLGAAIGTAKSGIGIAGIGTFKPELIMKSLIPVVMSGILAI 71 P+YAPFFG GCA+A++ + LGAA GTAKSG+GI +P+L+ K+++PV+M+GI+AI Sbjct: 6 PVYAPFFGAIGCASAIIFTSLGAAYGTAKSGVGICATCVLRPDLLFKNIVPVIMAGIIAI 65 Query: 72 YGLVVAVLIAGNLSPTEDYTLFNGFMHLSCGLCVGFACLSSGYAIGMVGDVGVRKYMHQP 131 YGLVV+VL+ +L + L+ GF+ L GL VG + L++G+AIG+VGD GVR QP Sbjct: 66 YGLVVSVLVCYSLG--QKQALYTGFIQLGAGLSVGLSGLAAGFAIGIVGDAGVRGSSQQP 123 Query: 132 RLFVGIVLILIFSEVLGLYGMIVALILNTRGSE 164 RLFVG++LILIF+EVLGLYG+IVAL+LN+R ++ Sbjct: 124 RLFVGMILILIFAEVLGLYGLIVALLLNSRATQ 156 >5VOZ-R nrPDB Length = 213 Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 6/128 (4%) Query: 22 GCAAAMVLSCLGAAIGTAKSGIGIAGIGTFKPELIMKSLIPVVMSGILAIYGLVVAVLIA 81 G A + LS +GAA G +G + G G P + K+LI ++ ++AIYGL++A++ + Sbjct: 63 GIALCVGLSVVGAAWGIFITGSSMIGAGVRAPRITTKNLISIIFCEVVAIYGLIIAIVFS 122 Query: 82 GNLSPT------EDYTLFNGFMHLSCGLCVGFACLSSGYAIGMVGDVGVRKYMHQPRLFV 135 L+ L+ G+ G+ VG + L G A+G+ G LFV Sbjct: 123 SKLTVATAENMYSKSNLYTGYSLFWAGITVGASNLICGIAVGITGATAAISDAADSALFV 182 Query: 136 GIVLILIF 143 I++I IF Sbjct: 183 KILVIEIF 190 Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust. Identities = 17/66 (25%), Positives = 39/66 (59%) Query: 96 FMHLSCGLCVGFACLSSGYAIGMVGDVGVRKYMHQPRLFVGIVLILIFSEVLGLYGMIVA 155 + +L LCVG + + + + I + G + + PR+ ++ +IF EV+ +YG+I+A Sbjct: 59 WANLGIALCVGLSVVGAAWGIFITGSSMIGAGVRAPRITTKNLISIIFCEVVAIYGLIIA 118 Query: 156 LILNTR 161 ++ +++ Sbjct: 119 IVFSSK 124 >2BL2-A nrPDB Length = 156 Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 2/141 (1%) Query: 18 FGFAGCAAAMVLSCLGAAIGTAKSGIGIAGIGTFKPELIMKSLIPVVMSGILAIYGLVVA 77 F A A + S +G+A G +G A + T +PE ++LI ++ G +YG V+A Sbjct: 14 FAVLAMATATIFSGIGSAKGVGMTGEAAAALTTSQPEKFGQALILQLLPGTQGLYGFVIA 73 Query: 78 VLIAGNLSPTEDYTLFNGFMHLSCGLCVGFACLSSGYAIGMVGDVGVRKYMHQPRLFVGI 137 LI NL D ++ G L L + F L SG A G V G++ +P Sbjct: 74 FLIFINLG--SDMSVVQGLNFLGASLPIAFTGLFSGIAQGKVAAAGIQILAKKPEHATKG 131 Query: 138 VLILIFSEVLGLYGMIVALIL 158 ++ E + G +++ +L Sbjct: 132 IIFAAMVETYAILGFVISFLL 152 >5Y5Z-O nrPDB Length = 99 Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 7/105 (6%) Query: 57 MKSLIPVVMSGILAIYGLVVAVLIAGNLSPTEDYTLFNGFMHLSCGLCVGFACLSSGYAI 116 MK L+ V+ LA++G + S D G + + GL VG A L +G A Sbjct: 1 MKKLLVTVL---LAVFGALAFAAEEAAASGGLD----RGLIAVGMGLAVGLAALGTGVAQ 53 Query: 117 GMVGDVGVRKYMHQPRLFVGIVLILIFSEVLGLYGMIVALILNTR 161 +G GV F ++ L+ E L ++G+++A ILN R Sbjct: 54 ARIGAAGVGAIAEDRSNFGTALIFLLLPETLVIFGLLIAFILNGR 98 >6FKH-S nrPDB Length = 81 Score = 32.0 bits (71), Expect = 0.11, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 4/64 (6%) Query: 99 LSCGLCVGFACLSSGYAIGMVGDVGVRKYMHQP----RLFVGIVLILIFSEVLGLYGMIV 154 ++ GL VG A + G G V QP ++ ++L L F E L +YG++V Sbjct: 11 IAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVV 70 Query: 155 ALIL 158 AL L Sbjct: 71 ALAL 74 >3IA7-A nrPDB Length = 402 Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust. Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 6/58 (10%) Query: 47 GIGTFKPELIMKSLIPVVMSGILAIYGLVVAVLIAGNLSPTEDYTLF------NGFMH 98 +G P+L++ + P + +LA AV + G + E Y+LF NG H Sbjct: 97 ALGDNPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYSLFKELWKSNGQRH 154 >4BEM-A nrPDB Length = 82 Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust. Identities = 16/49 (32%), Positives = 26/49 (53%) Query: 110 LSSGYAIGMVGDVGVRKYMHQPRLFVGIVLILIFSEVLGLYGMIVALIL 158 + G+A G + R+ Q + ++L +E G+YG+IVALIL Sbjct: 27 IGQGFAAGKGAEAVGRQPEAQSDIIRTMLLGAAVAETTGIYGLIVALIL 75 >2XQS-A nrPDB Length = 82 Score = 26.9 bits (58), Expect = 4.5, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 4/58 (6%) Query: 105 VGFACLSSGYAIGMVGDVGVRKYMHQP----RLFVGIVLILIFSEVLGLYGMIVALIL 158 VG + G G V QP ++ ++L L F E L +YG++VAL+L Sbjct: 18 VGIGSIGPGLGQGQAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALVL 75 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6O7U-o nrPDB 168 1e-42 5TJ5-D nrPDB 141 2e-34 6O7T-g nrPDB 139 8e-34 2BL2-A nrPDB 109 4e-25 5VOZ-R nrPDB 103 3e-23 5Y5Z-O nrPDB 60 5e-10 Sequences not found previously or not previously below threshold: 2XQS-A nrPDB 29 0.76 6FKH-S nrPDB 29 0.84 4BEM-J nrPDB 28 1.5 6GXC-A nrPDB 28 2.6 4BEM-A nrPDB 26 8.7 CONVERGED! >6O7U-o nrPDB Length = 164 Score = 168 bits (426), Expect = 1e-42, Method: Composition-based stats. Identities = 164/164 (100%), Positives = 164/164 (100%) Query: 1 MSTQLASNIYAPLYAPFFGFAGCAAAMVLSCLGAAIGTAKSGIGIAGIGTFKPELIMKSL 60 MSTQLASNIYAPLYAPFFGFAGCAAAMVLSCLGAAIGTAKSGIGIAGIGTFKPELIMKSL Sbjct: 1 MSTQLASNIYAPLYAPFFGFAGCAAAMVLSCLGAAIGTAKSGIGIAGIGTFKPELIMKSL 60 Query: 61 IPVVMSGILAIYGLVVAVLIAGNLSPTEDYTLFNGFMHLSCGLCVGFACLSSGYAIGMVG 120 IPVVMSGILAIYGLVVAVLIAGNLSPTEDYTLFNGFMHLSCGLCVGFACLSSGYAIGMVG Sbjct: 61 IPVVMSGILAIYGLVVAVLIAGNLSPTEDYTLFNGFMHLSCGLCVGFACLSSGYAIGMVG 120 Query: 121 DVGVRKYMHQPRLFVGIVLILIFSEVLGLYGMIVALILNTRGSE 164 DVGVRKYMHQPRLFVGIVLILIFSEVLGLYGMIVALILNTRGSE Sbjct: 121 DVGVRKYMHQPRLFVGIVLILIFSEVLGLYGMIVALILNTRGSE 164 >5TJ5-D nrPDB Length = 147 Score = 141 bits (355), Expect = 2e-34, Method: Composition-based stats. Identities = 147/147 (100%), Positives = 147/147 (100%) Query: 17 FFGFAGCAAAMVLSCLGAAIGTAKSGIGIAGIGTFKPELIMKSLIPVVMSGILAIYGLVV 76 FFGFAGCAAAMVLSCLGAAIGTAKSGIGIAGIGTFKPELIMKSLIPVVMSGILAIYGLVV Sbjct: 1 FFGFAGCAAAMVLSCLGAAIGTAKSGIGIAGIGTFKPELIMKSLIPVVMSGILAIYGLVV 60 Query: 77 AVLIAGNLSPTEDYTLFNGFMHLSCGLCVGFACLSSGYAIGMVGDVGVRKYMHQPRLFVG 136 AVLIAGNLSPTEDYTLFNGFMHLSCGLCVGFACLSSGYAIGMVGDVGVRKYMHQPRLFVG Sbjct: 61 AVLIAGNLSPTEDYTLFNGFMHLSCGLCVGFACLSSGYAIGMVGDVGVRKYMHQPRLFVG 120 Query: 137 IVLILIFSEVLGLYGMIVALILNTRGS 163 IVLILIFSEVLGLYGMIVALILNTRGS Sbjct: 121 IVLILIFSEVLGLYGMIVALILNTRGS 147 >6O7T-g nrPDB Length = 160 Score = 139 bits (349), Expect = 8e-34, Method: Composition-based stats. Identities = 86/153 (56%), Positives = 120/153 (78%), Gaps = 2/153 (1%) Query: 12 PLYAPFFGFAGCAAAMVLSCLGAAIGTAKSGIGIAGIGTFKPELIMKSLIPVVMSGILAI 71 P+YAPFFG GCA+A++ + LGAA GTAKSG+GI +P+L+ K+++PV+M+GI+AI Sbjct: 6 PVYAPFFGAIGCASAIIFTSLGAAYGTAKSGVGICATCVLRPDLLFKNIVPVIMAGIIAI 65 Query: 72 YGLVVAVLIAGNLSPTEDYTLFNGFMHLSCGLCVGFACLSSGYAIGMVGDVGVRKYMHQP 131 YGLVV+VL+ +L + L+ GF+ L GL VG + L++G+AIG+VGD GVR QP Sbjct: 66 YGLVVSVLVCYSLG--QKQALYTGFIQLGAGLSVGLSGLAAGFAIGIVGDAGVRGSSQQP 123 Query: 132 RLFVGIVLILIFSEVLGLYGMIVALILNTRGSE 164 RLFVG++LILIF+EVLGLYG+IVAL+LN+R ++ Sbjct: 124 RLFVGMILILIFAEVLGLYGLIVALLLNSRATQ 156 >2BL2-A nrPDB Length = 156 Score = 109 bits (273), Expect = 4e-25, Method: Composition-based stats. Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 2/141 (1%) Query: 18 FGFAGCAAAMVLSCLGAAIGTAKSGIGIAGIGTFKPELIMKSLIPVVMSGILAIYGLVVA 77 F A A + S +G+A G +G A + T +PE ++LI ++ G +YG V+A Sbjct: 14 FAVLAMATATIFSGIGSAKGVGMTGEAAAALTTSQPEKFGQALILQLLPGTQGLYGFVIA 73 Query: 78 VLIAGNLSPTEDYTLFNGFMHLSCGLCVGFACLSSGYAIGMVGDVGVRKYMHQPRLFVGI 137 LI NL D ++ G L L + F L SG A G V G++ +P Sbjct: 74 FLIFINLG--SDMSVVQGLNFLGASLPIAFTGLFSGIAQGKVAAAGIQILAKKPEHATKG 131 Query: 138 VLILIFSEVLGLYGMIVALIL 158 ++ E + G +++ +L Sbjct: 132 IIFAAMVETYAILGFVISFLL 152 Score = 26.2 bits (56), Expect = 7.7, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 26/65 (40%) Query: 20 FAGCAAAMVLSCLGAAIGTAKSGIGIAGIGTFKPELIMKSLIPVVMSGILAIYGLVVAVL 79 F G + + + L + I K I KPE K +I M AI G V++ L Sbjct: 92 FLGASLPIAFTGLFSGIAQGKVAAAGIQILAKKPEHATKGIIFAAMVETYAILGFVISFL 151 Query: 80 IAGNL 84 + N Sbjct: 152 LVLNA 156 >5VOZ-R nrPDB Length = 213 Score = 103 bits (257), Expect = 3e-23, Method: Composition-based stats. Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 6/153 (3%) Query: 18 FGFAGCAAAMVLSCLGAAIGTAKSGIGIAGIGTFKPELIMKSLIPVVMSGILAIYGLVVA 77 + G A + LS +GAA G +G + G G P + K+LI ++ ++AIYGL++A Sbjct: 59 WANLGIALCVGLSVVGAAWGIFITGSSMIGAGVRAPRITTKNLISIIFCEVVAIYGLIIA 118 Query: 78 VLIAGNLSPT------EDYTLFNGFMHLSCGLCVGFACLSSGYAIGMVGDVGVRKYMHQP 131 ++ + L+ L+ G+ G+ VG + L G A+G+ G Sbjct: 119 IVFSSKLTVATAENMYSKSNLYTGYSLFWAGITVGASNLICGIAVGITGATAAISDAADS 178 Query: 132 RLFVGIVLILIFSEVLGLYGMIVALILNTRGSE 164 LFV I++I IF +LGL G+IV L++ + SE Sbjct: 179 ALFVKILVIEIFGSILGLLGLIVGLLMAGKASE 211 >5Y5Z-O nrPDB Length = 99 Score = 60.1 bits (144), Expect = 5e-10, Method: Composition-based stats. Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 7/105 (6%) Query: 57 MKSLIPVVMSGILAIYGLVVAVLIAGNLSPTEDYTLFNGFMHLSCGLCVGFACLSSGYAI 116 MK L+ V+ LA++G + S D G + + GL VG A L +G A Sbjct: 1 MKKLLVTVL---LAVFGALAFAAEEAAASGGLD----RGLIAVGMGLAVGLAALGTGVAQ 53 Query: 117 GMVGDVGVRKYMHQPRLFVGIVLILIFSEVLGLYGMIVALILNTR 161 +G GV F ++ L+ E L ++G+++A ILN R Sbjct: 54 ARIGAAGVGAIAEDRSNFGTALIFLLLPETLVIFGLLIAFILNGR 98 >2XQS-A nrPDB Length = 82 Score = 29.2 bits (64), Expect = 0.76, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 4/74 (5%) Query: 89 DYTLFNGFMHLSCGLCVGFACLSSGYAIGMVGDVGVRKYMHQPRLFVGI----VLILIFS 144 + L ++ L VG + G G V QP I +L L F Sbjct: 2 ESNLTTAASVIAAALAVGIGSIGPGLGQGQAAGQAVEGIARQPEAEGKIRGTLLLSLAFM 61 Query: 145 EVLGLYGMIVALIL 158 E L +YG++VAL+L Sbjct: 62 EALTIYGLVVALVL 75 >6FKH-S nrPDB Length = 81 Score = 29.2 bits (64), Expect = 0.84, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 4/71 (5%) Query: 92 LFNGFMHLSCGLCVGFACLSSGYAIGMVGDVGVRKYMHQPRLFVGI----VLILIFSEVL 147 L ++ GL VG A + G G V QP I +L L F E L Sbjct: 4 LIAAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEAL 63 Query: 148 GLYGMIVALIL 158 +YG++VAL L Sbjct: 64 TIYGLVVALAL 74 >4BEM-J nrPDB Length = 182 Score = 28.5 bits (62), Expect = 1.5, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 54/149 (36%), Gaps = 8/149 (5%) Query: 18 FGFAGCAAAMVLS---CLGAAIGTAKSGIGIAGIGTFKPELIMKSLIPVVMSGILAIYGL 74 F G AMV +G K + T +++M L+ ++ I+ L Sbjct: 27 FSALGIGLAMVAGVGPGIGQGFAAGKGAEAVGKNPTKSNDIVMIMLLGAAVAETSGIFSL 86 Query: 75 VVAVLIAGNLSPTEDYTLFNGFMHLSCGLCVGF-ACLSSGYAIGMVGDVGVRKYMHQPRL 133 V+A+++ + + A + G G G +P + Sbjct: 87 VIALILLFANPFISSTASVWILSASAMASGIAMIAGIGPGTGQGYAAGKGAEAVGIRPEM 146 Query: 134 FVGIVLILIF----SEVLGLYGMIVALIL 158 I+ +++ ++ G+Y +IVALIL Sbjct: 147 KSAILRVMLLGQAVAQTTGIYALIVALIL 175 Score = 26.5 bits (57), Expect = 5.1, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 5/79 (6%) Query: 84 LSPTEDYTLFNGFMHLSCGLCVGFACLSSGYAIGMVGDVGVRKYMHQPRLFVGIVLILIF 143 LS + + GF L GL + A + G G G P IV+I++ Sbjct: 15 LSQFDPVDVIKGFSALGIGLAM-VAGVGPGIGQGFAAGKGAEAVGKNPTKSNDIVMIMLL 73 Query: 144 ----SEVLGLYGMIVALIL 158 +E G++ +++ALIL Sbjct: 74 GAAVAETSGIFSLVIALIL 92 >6GXC-A nrPDB Length = 724 Score = 27.7 bits (60), Expect = 2.6, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 32/86 (37%), Gaps = 6/86 (6%) Query: 34 AAIGTAKSGIGIAGIGTFKPELIMKSLIPVVMSGILAIYGLVVAVLIAGNLSPTEDYTLF 93 AA I + T PE+ M+ + V+ IL+ G ++ +L L Sbjct: 306 AAFMYFNVNETIMEVNTIDPEVFMQRISSSVLVFILSFIGFIL-LLKDHKSMLLALPMLA 364 Query: 94 NGFMHLSCGL-----CVGFACLSSGY 114 GFM L GL V L GY Sbjct: 365 LGFMALRAGLRFTIYAVPVMALGFGY 390 >4BEM-A nrPDB Length = 82 Score = 25.8 bits (55), Expect = 8.7, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 26/50 (52%) Query: 109 CLSSGYAIGMVGDVGVRKYMHQPRLFVGIVLILIFSEVLGLYGMIVALIL 158 + G+A G + R+ Q + ++L +E G+YG+IVALIL Sbjct: 26 GIGQGFAAGKGAEAVGRQPEAQSDIIRTMLLGAAVAETTGIYGLIVALIL 75 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.322 0.136 0.337 Lambda K H 0.267 0.0420 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,339,392 Number of Sequences: 36641 Number of extensions: 184273 Number of successful extensions: 718 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 30 Number of HSP's successfully gapped in prelim test: 22 Number of HSP's that attempted gapping in prelim test: 640 Number of HSP's gapped (non-prelim): 66 length of query: 164 length of database: 10,336,785 effective HSP length: 90 effective length of query: 74 effective length of database: 7,039,095 effective search space: 520893030 effective search space used: 520893030 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.4 bits) S2: 55 (25.8 bits)