BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P32833 (620 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5ZR1-B nrPDB 1283 0.0 4XGC-B nrPDB 142 6e-34 5UJM-B nrPDB 131 7e-31 5C8H-A nrPDB 54 1e-07 5ZLR-A nrPDB 30 3.0 4ECL-A nrPDB 30 4.2 3K4O-A nrPDB 30 4.4 2AAZ-A nrPDB 29 4.7 5UOW-A nrPDB 28 9.1 >5ZR1-B nrPDB Length = 620 Score = 1283 bits (3321), Expect = 0.0, Method: Compositional matrix adjust. Identities = 620/620 (100%), Positives = 620/620 (100%) Query: 1 MLNGEDFVEHNDILSSPAKSRNVTPKRVDPHGERQLRRIHSSKKNLLERISLVGNERKNT 60 MLNGEDFVEHNDILSSPAKSRNVTPKRVDPHGERQLRRIHSSKKNLLERISLVGNERKNT Sbjct: 1 MLNGEDFVEHNDILSSPAKSRNVTPKRVDPHGERQLRRIHSSKKNLLERISLVGNERKNT 60 Query: 61 SPDPALKPKTPSKAPRKRGRPRKIQEELTDRIKKDEKDTISSKKKRKLDKDTSGNVNEES 120 SPDPALKPKTPSKAPRKRGRPRKIQEELTDRIKKDEKDTISSKKKRKLDKDTSGNVNEES Sbjct: 61 SPDPALKPKTPSKAPRKRGRPRKIQEELTDRIKKDEKDTISSKKKRKLDKDTSGNVNEES 120 Query: 121 KTSNNKQVMEKTGIKEKREREKIQVATTTYEDNVTPQTDDNFVSNSPEPPEPATPSKKSL 180 KTSNNKQVMEKTGIKEKREREKIQVATTTYEDNVTPQTDDNFVSNSPEPPEPATPSKKSL Sbjct: 121 KTSNNKQVMEKTGIKEKREREKIQVATTTYEDNVTPQTDDNFVSNSPEPPEPATPSKKSL 180 Query: 181 TTNHDFTSPLKQIIMNNLKEYKDSTSPGKLTLSRNFTPTPVPKNKKLYQTSETKSASSFL 240 TTNHDFTSPLKQIIMNNLKEYKDSTSPGKLTLSRNFTPTPVPKNKKLYQTSETKSASSFL Sbjct: 181 TTNHDFTSPLKQIIMNNLKEYKDSTSPGKLTLSRNFTPTPVPKNKKLYQTSETKSASSFL 240 Query: 241 DTFEGYFDQRKIVRTNAKSRHTMSMAPDVTREEFSLVSNFFNENFQKRPRQKLFEIQKKM 300 DTFEGYFDQRKIVRTNAKSRHTMSMAPDVTREEFSLVSNFFNENFQKRPRQKLFEIQKKM Sbjct: 241 DTFEGYFDQRKIVRTNAKSRHTMSMAPDVTREEFSLVSNFFNENFQKRPRQKLFEIQKKM 300 Query: 301 FPQYWFELTQGFSLLFYGVGSKRNFLEEFAIDYLSPKIAYSQLAYENELQQNKPVNSIPC 360 FPQYWFELTQGFSLLFYGVGSKRNFLEEFAIDYLSPKIAYSQLAYENELQQNKPVNSIPC Sbjct: 301 FPQYWFELTQGFSLLFYGVGSKRNFLEEFAIDYLSPKIAYSQLAYENELQQNKPVNSIPC 360 Query: 361 LILNGYNPSCNYRDVFKEITDLLVPAELTRSETKYWGNHVILQIQKMIDFYKNQPLDIKL 420 LILNGYNPSCNYRDVFKEITDLLVPAELTRSETKYWGNHVILQIQKMIDFYKNQPLDIKL Sbjct: 361 LILNGYNPSCNYRDVFKEITDLLVPAELTRSETKYWGNHVILQIQKMIDFYKNQPLDIKL 420 Query: 421 ILVVHNLDGPSIRKNTFQTMLSFLSVIRQIAIVASTDHIYAPLLWDNMKAQNYNFVFHDI 480 ILVVHNLDGPSIRKNTFQTMLSFLSVIRQIAIVASTDHIYAPLLWDNMKAQNYNFVFHDI Sbjct: 421 ILVVHNLDGPSIRKNTFQTMLSFLSVIRQIAIVASTDHIYAPLLWDNMKAQNYNFVFHDI 480 Query: 481 SNFEPSTVESTFQDVMKMGKSDTSSGAEGAKYVLQSLTVNSKKMYKLLIETQMQNMGNLS 540 SNFEPSTVESTFQDVMKMGKSDTSSGAEGAKYVLQSLTVNSKKMYKLLIETQMQNMGNLS Sbjct: 481 SNFEPSTVESTFQDVMKMGKSDTSSGAEGAKYVLQSLTVNSKKMYKLLIETQMQNMGNLS 540 Query: 541 ANTGPKRGTQRTGVELKLFNHLCAADFIASNEIALRSMLREFIEHKMANITKNNSGMEII 600 ANTGPKRGTQRTGVELKLFNHLCAADFIASNEIALRSMLREFIEHKMANITKNNSGMEII Sbjct: 541 ANTGPKRGTQRTGVELKLFNHLCAADFIASNEIALRSMLREFIEHKMANITKNNSGMEII 600 Query: 601 WVPYTYAELEKLLKTVLNTL 620 WVPYTYAELEKLLKTVLNTL Sbjct: 601 WVPYTYAELEKLLKTVLNTL 620 >4XGC-B nrPDB Length = 354 Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 107/395 (27%), Positives = 183/395 (46%), Gaps = 56/395 (14%) Query: 229 QTSETKSASSFLDTFEGYFDQRKIVRTNAKSRHTMS------MAPDVTREEFSLVSNFFN 282 Q++ K ++ F+ +GYF + S HT+ +A D FSL+S Sbjct: 2 QSARAKKSNEFVPESDGYFHSHASSKI-LTSDHTLDRLKNPRLAADRV---FSLLSEIKT 57 Query: 283 ENFQKRPRQKLFEIQKKMFPQYWFELTQGFSLLFYGVGSKRNFLEEFAIDYLSPKIAYSQ 342 + + E + FP++ L +GF++L YG+GSK L+ F Sbjct: 58 SAEHEGSINAIMEEYRSYFPKWMCILNEGFNILLYGLGSKHQLLQSF------------- 104 Query: 343 LAYENELQQNKPVNSIPCLILNGYNPSCNYRDVFKEITDLLVPAELTRSETKYWGNHVIL 402 E+ + V L++NG+ PS +D+ IT ++ A ++ + Sbjct: 105 ---HREVLHKQTV-----LVVNGFFPSLTIKDMLDSITSDILDAGISPANP--------- 147 Query: 403 QIQKMIDFYKNQPLDI---KLILVVHNLDGPSIRKNTFQTMLSFLSVIRQIAIVASTDHI 459 + +D + + I L L+VHNLDG +R Q +LS L+ I I ++AS DHI Sbjct: 148 --HEAVDMIEEEFALIPETHLFLIVHNLDGAMLRNVKAQAILSRLARIPNIHLLASIDHI 205 Query: 460 YAPLLWDNMKAQNYNFVFHDISNFEPSTVESTFQDVMKMGKSDTSSGAEGAKYVLQSLTV 519 PLLWD K ++NF + D + P T E+ F++ + + S + V SLT Sbjct: 206 NTPLLWDQGKLCSFNFSWWDCTTMLPYTNETAFENSLLVQNSG-ELALSSMRSVFSSLTT 264 Query: 520 NSKKMYKLLIETQMQNMGNLSANTGPKRGTQRTGVELKLFNHLCAADFIASNEIALRSML 579 NS+ +Y L+++ Q++N GN + P R + C F+ S+++ALR+ L Sbjct: 265 NSRGIYMLIVKYQLKNKGNATYQGMPFRDLYSS----------CREAFLVSSDLALRAQL 314 Query: 580 REFIEHKMANITKNNSGMEIIWVPYTYAELEKLLK 614 EF++HK+ ++ G E + +P A L++ L+ Sbjct: 315 TEFLDHKLVKSKRSVDGSEQLTIPIDGALLQQFLE 349 >5UJM-B nrPDB Length = 347 Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 82/307 (26%), Positives = 158/307 (51%), Gaps = 42/307 (13%) Query: 298 KKMFPQYWFELTQGFSLLFYGVGSKRNFLEEFAIDYLSPKIAYSQLAYENELQQNKPVNS 357 +K+F ++ +L GF+++ YG+GSKR+ LE F L I Sbjct: 65 EKLFHKWMLQLHLGFNIVLYGLGSKRDLLERFRTTMLQDSIH------------------ 106 Query: 358 IPCLILNGYNPSCNYRDVFKEITDLLVPAELT-RSETKYWGNHVILQIQKMIDFYKNQPL 416 +++NG+ P + + V IT+ ++ T RS ++ Q+ +++ +K Sbjct: 107 ---VVINGFFPGISVKSVLNSITEEVLDHMGTFRS--------ILDQLDWIVNKFKEDS- 154 Query: 417 DIKLILVVHNLDGPSIRKNTFQTMLSFLSVIRQIAIVASTDHIYAPLLWDNMKAQNYNFV 476 ++L L++HNLD +R Q ++ LS + I ++AS DH+ APL+WD+ K +N++ Sbjct: 155 SLELFLLIHNLDSQMLRGEKSQQIIGQLSSLHNIYLIASIDHLNAPLMWDHAKQSLFNWL 214 Query: 477 FHDISNFEPSTVESTFQDVMKMGKSDTSSGAEGAKYVLQSLTVNSKKMYKLLIETQMQNM 536 +++ + + P T E+++++ + + K S +VL+SLT N++ +++LLI+ Q+ N Sbjct: 215 WYETTTYSPYTEETSYENSL-LVKQSGSLPLSSLTHVLRSLTPNARGIFRLLIKYQLDNQ 273 Query: 537 GNLSANTGPKRGTQRTGVELKLFNHLCAADFIASNEIALRSMLREFIEHKMANITKNNSG 596 N S G+ + F C F+ ++++ LR+ L EF +HK+ K G Sbjct: 274 DNPSY----------IGLSFQDFYQQCREAFLVNSDLTLRAQLTEFRDHKLIRTKKGTDG 323 Query: 597 MEIIWVP 603 +E + +P Sbjct: 324 VEYLLIP 330 >5C8H-A nrPDB Length = 121 Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 10/103 (9%) Query: 512 YVLQSLTVNSKKMYKLLIETQMQNMGNLSANTGPKRGTQRTGVELKLFNHLCAADFIASN 571 +VL+SLT N++ +++LLI+ Q+ N N S G+ + F C F+ ++ Sbjct: 23 HVLRSLTPNARGIFRLLIKYQLDNQDNPSY----------IGLSFQDFYQQCREAFLVNS 72 Query: 572 EIALRSMLREFIEHKMANITKNNSGMEIIWVPYTYAELEKLLK 614 ++ LR+ L EF +HK+ K G+E + +P L L+ Sbjct: 73 DLTLRAQLTEFRDHKLIRTKKGTDGVEYLLIPVDNGTLTDFLE 115 >5ZLR-A nrPDB Length = 380 Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust. Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 3/56 (5%) Query: 50 ISLVGNERKNTSPDPALKPKTPSKAPRKRGRPRKIQEELTDRIKKDEKDTISSKKK 105 +++VGN S PAL+ T + R++GR R E + D ++ DE + + + +K Sbjct: 283 LAMVGNSSSGLSEAPALQVPTVNIGDRQKGRLRC--ESILD-VRLDENEIVEALQK 335 >4ECL-A nrPDB Length = 374 Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust. Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 25/118 (21%) Query: 480 ISNFEPSTVESTFQ--------DVMKMGKSDTSSGAEGAKYVLQSLTVNSKKMYKLLIET 531 +S+F +T++ + +++ +G + S E KY L ++ + Y LL+ Sbjct: 58 VSSFAVATIDEGIRLRKYGISSEILILGYTSPSRAKELCKYELTQTLIDYR--YSLLLNK 115 Query: 532 QMQNM-GNLSANTGPKRGTQRT--------GVELK------LFNHLCAADFIASNEIA 574 Q ++ ++ +TG R T LK +F HLCAAD + N++A Sbjct: 116 QGYDIKAHIKIDTGMHRLGFSTEDKDKILAAFSLKHIKVAGIFTHLCAADSLEENDVA 173 >3K4O-A nrPDB Length = 266 Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust. Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 2/30 (6%) Query: 396 WGN--HVILQIQKMIDFYKNQPLDIKLILV 423 W N + ++I+ +D+YKNQ +IKLILV Sbjct: 29 WDNLERIAMEIKNALDYYKNQNKEIKLILV 58 >2AAZ-A nrPDB Length = 317 Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust. Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Query: 386 AELTRSETKYWGNHVILQIQKMIDFYKNQPLDIKLILVVHN 426 AE T ++ Y G V Q+Q++ID KN P D ++IL N Sbjct: 136 AEYTDADGDYKGKGVD-QLQRVIDTIKNNPTDRRIILSAWN 175 >5UOW-A nrPDB Length = 814 Score = 28.5 bits (62), Expect = 9.1, Method: Compositional matrix adjust. Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 6/86 (6%) Query: 99 TISSKKKRKLDKDTSGNVNEESKTSNNKQV-MEKTGIKEKREREKIQVATTTYEDNVTPQ 157 +S+KK ++ ++ VN+ +K +++ + T + + IQ+A + ED ++ Q Sbjct: 10 VLSTKKHEQIFREA---VNQANKRHFTRKIQLNATSVTHRPN--AIQMALSVCEDLISSQ 64 Query: 158 TDDNFVSNSPEPPEPATPSKKSLTTN 183 VS+ P P + TP+ S T Sbjct: 65 VYAILVSHPPAPTDHLTPTPISYTAG 90 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5ZR1-B nrPDB 1027 0.0 4XGC-B nrPDB 489 e-138 5UJM-B nrPDB 415 e-116 5C8H-A nrPDB 173 2e-43 Sequences not found previously or not previously below threshold: 6D2K-A nrPDB 33 0.32 4N5C-A nrPDB 32 0.65 6D21-A nrPDB 31 2.1 4QDG-A nrPDB 31 2.4 6C0F-I nrPDB 29 4.7 3F02-A nrPDB 29 6.5 CONVERGED! >5ZR1-B nrPDB Length = 620 Score = 1027 bits (2656), Expect = 0.0, Method: Composition-based stats. Identities = 620/620 (100%), Positives = 620/620 (100%) Query: 1 MLNGEDFVEHNDILSSPAKSRNVTPKRVDPHGERQLRRIHSSKKNLLERISLVGNERKNT 60 MLNGEDFVEHNDILSSPAKSRNVTPKRVDPHGERQLRRIHSSKKNLLERISLVGNERKNT Sbjct: 1 MLNGEDFVEHNDILSSPAKSRNVTPKRVDPHGERQLRRIHSSKKNLLERISLVGNERKNT 60 Query: 61 SPDPALKPKTPSKAPRKRGRPRKIQEELTDRIKKDEKDTISSKKKRKLDKDTSGNVNEES 120 SPDPALKPKTPSKAPRKRGRPRKIQEELTDRIKKDEKDTISSKKKRKLDKDTSGNVNEES Sbjct: 61 SPDPALKPKTPSKAPRKRGRPRKIQEELTDRIKKDEKDTISSKKKRKLDKDTSGNVNEES 120 Query: 121 KTSNNKQVMEKTGIKEKREREKIQVATTTYEDNVTPQTDDNFVSNSPEPPEPATPSKKSL 180 KTSNNKQVMEKTGIKEKREREKIQVATTTYEDNVTPQTDDNFVSNSPEPPEPATPSKKSL Sbjct: 121 KTSNNKQVMEKTGIKEKREREKIQVATTTYEDNVTPQTDDNFVSNSPEPPEPATPSKKSL 180 Query: 181 TTNHDFTSPLKQIIMNNLKEYKDSTSPGKLTLSRNFTPTPVPKNKKLYQTSETKSASSFL 240 TTNHDFTSPLKQIIMNNLKEYKDSTSPGKLTLSRNFTPTPVPKNKKLYQTSETKSASSFL Sbjct: 181 TTNHDFTSPLKQIIMNNLKEYKDSTSPGKLTLSRNFTPTPVPKNKKLYQTSETKSASSFL 240 Query: 241 DTFEGYFDQRKIVRTNAKSRHTMSMAPDVTREEFSLVSNFFNENFQKRPRQKLFEIQKKM 300 DTFEGYFDQRKIVRTNAKSRHTMSMAPDVTREEFSLVSNFFNENFQKRPRQKLFEIQKKM Sbjct: 241 DTFEGYFDQRKIVRTNAKSRHTMSMAPDVTREEFSLVSNFFNENFQKRPRQKLFEIQKKM 300 Query: 301 FPQYWFELTQGFSLLFYGVGSKRNFLEEFAIDYLSPKIAYSQLAYENELQQNKPVNSIPC 360 FPQYWFELTQGFSLLFYGVGSKRNFLEEFAIDYLSPKIAYSQLAYENELQQNKPVNSIPC Sbjct: 301 FPQYWFELTQGFSLLFYGVGSKRNFLEEFAIDYLSPKIAYSQLAYENELQQNKPVNSIPC 360 Query: 361 LILNGYNPSCNYRDVFKEITDLLVPAELTRSETKYWGNHVILQIQKMIDFYKNQPLDIKL 420 LILNGYNPSCNYRDVFKEITDLLVPAELTRSETKYWGNHVILQIQKMIDFYKNQPLDIKL Sbjct: 361 LILNGYNPSCNYRDVFKEITDLLVPAELTRSETKYWGNHVILQIQKMIDFYKNQPLDIKL 420 Query: 421 ILVVHNLDGPSIRKNTFQTMLSFLSVIRQIAIVASTDHIYAPLLWDNMKAQNYNFVFHDI 480 ILVVHNLDGPSIRKNTFQTMLSFLSVIRQIAIVASTDHIYAPLLWDNMKAQNYNFVFHDI Sbjct: 421 ILVVHNLDGPSIRKNTFQTMLSFLSVIRQIAIVASTDHIYAPLLWDNMKAQNYNFVFHDI 480 Query: 481 SNFEPSTVESTFQDVMKMGKSDTSSGAEGAKYVLQSLTVNSKKMYKLLIETQMQNMGNLS 540 SNFEPSTVESTFQDVMKMGKSDTSSGAEGAKYVLQSLTVNSKKMYKLLIETQMQNMGNLS Sbjct: 481 SNFEPSTVESTFQDVMKMGKSDTSSGAEGAKYVLQSLTVNSKKMYKLLIETQMQNMGNLS 540 Query: 541 ANTGPKRGTQRTGVELKLFNHLCAADFIASNEIALRSMLREFIEHKMANITKNNSGMEII 600 ANTGPKRGTQRTGVELKLFNHLCAADFIASNEIALRSMLREFIEHKMANITKNNSGMEII Sbjct: 541 ANTGPKRGTQRTGVELKLFNHLCAADFIASNEIALRSMLREFIEHKMANITKNNSGMEII 600 Query: 601 WVPYTYAELEKLLKTVLNTL 620 WVPYTYAELEKLLKTVLNTL Sbjct: 601 WVPYTYAELEKLLKTVLNTL 620 >4XGC-B nrPDB Length = 354 Score = 489 bits (1258), Expect = e-138, Method: Composition-based stats. Identities = 107/395 (27%), Positives = 183/395 (46%), Gaps = 56/395 (14%) Query: 229 QTSETKSASSFLDTFEGYFDQRKIVRTNAKSRHTMS------MAPDVTREEFSLVSNFFN 282 Q++ K ++ F+ +GYF + S HT+ +A D FSL+S Sbjct: 2 QSARAKKSNEFVPESDGYFHSHASSKI-LTSDHTLDRLKNPRLAADRV---FSLLSEIKT 57 Query: 283 ENFQKRPRQKLFEIQKKMFPQYWFELTQGFSLLFYGVGSKRNFLEEFAIDYLSPKIAYSQ 342 + + E + FP++ L +GF++L YG+GSK L+ F Sbjct: 58 SAEHEGSINAIMEEYRSYFPKWMCILNEGFNILLYGLGSKHQLLQSF------------- 104 Query: 343 LAYENELQQNKPVNSIPCLILNGYNPSCNYRDVFKEITDLLVPAELTRSETKYWGNHVIL 402 E+ + V L++NG+ PS +D+ IT ++ A ++ + Sbjct: 105 ---HREVLHKQTV-----LVVNGFFPSLTIKDMLDSITSDILDAGISPANP--------- 147 Query: 403 QIQKMIDFYKNQPLDI---KLILVVHNLDGPSIRKNTFQTMLSFLSVIRQIAIVASTDHI 459 + +D + + I L L+VHNLDG +R Q +LS L+ I I ++AS DHI Sbjct: 148 --HEAVDMIEEEFALIPETHLFLIVHNLDGAMLRNVKAQAILSRLARIPNIHLLASIDHI 205 Query: 460 YAPLLWDNMKAQNYNFVFHDISNFEPSTVESTFQDVMKMGKSDTSSGAEGAKYVLQSLTV 519 PLLWD K ++NF + D + P T E+ F++ + + S + V SLT Sbjct: 206 NTPLLWDQGKLCSFNFSWWDCTTMLPYTNETAFENSLLVQNS-GELALSSMRSVFSSLTT 264 Query: 520 NSKKMYKLLIETQMQNMGNLSANTGPKRGTQRTGVELKLFNHLCAADFIASNEIALRSML 579 NS+ +Y L+++ Q++N GN + P R + C F+ S+++ALR+ L Sbjct: 265 NSRGIYMLIVKYQLKNKGNATYQGMPFRDLYSS----------CREAFLVSSDLALRAQL 314 Query: 580 REFIEHKMANITKNNSGMEIIWVPYTYAELEKLLK 614 EF++HK+ ++ G E + +P A L++ L+ Sbjct: 315 TEFLDHKLVKSKRSVDGSEQLTIPIDGALLQQFLE 349 >5UJM-B nrPDB Length = 347 Score = 415 bits (1066), Expect = e-116, Method: Composition-based stats. Identities = 94/380 (24%), Positives = 179/380 (47%), Gaps = 52/380 (13%) Query: 241 DTFEGYFDQRKIVRTNAKSRHTMS------MAPDVTREEFSLVSNFFNENFQKRPRQKLF 294 D E YF+ + S T+ + R S VS F+ ++L Sbjct: 8 DLVEEYFEAHSSSKV-LTSDRTLQKLKRAKLDQQTLRNLLSKVSPSFSAE-----LKQLN 61 Query: 295 EIQKKMFPQYWFELTQGFSLLFYGVGSKRNFLEEFAIDYLSPKIAYSQLAYENELQQNKP 354 + +K+F ++ +L GF+++ YG+GSKR+ LE F L I Sbjct: 62 QQYEKLFHKWMLQLHLGFNIVLYGLGSKRDLLERFRTTMLQDSIH--------------- 106 Query: 355 VNSIPCLILNGYNPSCNYRDVFKEITDLLVPAELTRSETKYWGNHVILQIQKMIDFYKNQ 414 +++NG+ P + + V IT+ ++ T ++ Q+ +++ +K Sbjct: 107 ------VVINGFFPGISVKSVLNSITEEVLDHMGT-------FRSILDQLDWIVNKFKED 153 Query: 415 PLDIKLILVVHNLDGPSIRKNTFQTMLSFLSVIRQIAIVASTDHIYAPLLWDNMKAQNYN 474 ++L L++HNLD +R Q ++ LS + I ++AS DH+ APL+WD+ K +N Sbjct: 154 S-SLELFLLIHNLDSQMLRGEKSQQIIGQLSSLHNIYLIASIDHLNAPLMWDHAKQSLFN 212 Query: 475 FVFHDISNFEPSTVESTFQDVMKMGKSDTSSGAEGAKYVLQSLTVNSKKMYKLLIETQMQ 534 +++++ + + P T E+++++ + + K S +VL+SLT N++ +++LLI+ Q+ Sbjct: 213 WLWYETTTYSPYTEETSYENSL-LVKQSGSLPLSSLTHVLRSLTPNARGIFRLLIKYQLD 271 Query: 535 NMGNLSANTGPKRGTQRTGVELKLFNHLCAADFIASNEIALRSMLREFIEHKMANITKNN 594 N N S G+ + F C F+ ++++ LR+ L EF +HK+ K Sbjct: 272 NQDNPSY----------IGLSFQDFYQQCREAFLVNSDLTLRAQLTEFRDHKLIRTKKGT 321 Query: 595 SGMEIIWVPYTYAELEKLLK 614 G+E + +P L L+ Sbjct: 322 DGVEYLLIPVDNGTLTDFLE 341 >5C8H-A nrPDB Length = 121 Score = 173 bits (438), Expect = 2e-43, Method: Composition-based stats. Identities = 32/125 (25%), Positives = 62/125 (49%), Gaps = 11/125 (8%) Query: 490 STFQDVMKMGKSDTSSGAEGAKYVLQSLTVNSKKMYKLLIETQMQNMGNLSANTGPKRGT 549 +++++ + + K S +VL+SLT N++ +++LLI+ Q+ N N S Sbjct: 2 TSYENSL-LVKQSGSLPLSSLTHVLRSLTPNARGIFRLLIKYQLDNQDNPSY-------- 52 Query: 550 QRTGVELKLFNHLCAADFIASNEIALRSMLREFIEHKMANITKNNSGMEIIWVPYTYAEL 609 G+ + F C F+ ++++ LR+ L EF +HK+ K G+E + +P L Sbjct: 53 --IGLSFQDFYQQCREAFLVNSDLTLRAQLTEFRDHKLIRTKKGTDGVEYLLIPVDNGTL 110 Query: 610 EKLLK 614 L+ Sbjct: 111 TDFLE 115 >6D2K-A nrPDB Length = 288 Score = 33.2 bits (74), Expect = 0.32, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 45/120 (37%), Gaps = 3/120 (2%) Query: 287 KRPRQKLFEIQKKMFPQYWFELTQGFSLLFYGVGSKRNFLEEFAIDYLSPKIAYSQLAYE 346 ++P+ + + K FP +L + ++ + + KR+ LEE + + Sbjct: 74 RKPKNAVLRLAVKFFPPDPGQLQEEYTRYLFALQLKRDLLEERLTCTANTAALLISHLLQ 133 Query: 347 NELQQNKPVNSIPCLILNGYNPSCNYRDVFKEITDLLVPAEL-TRSETKYWGNHVILQIQ 405 +E+ L N Y P N ++I D T +E+ + + +++ Sbjct: 134 SEIGDYDETLDREHLKANEYLP--NQEKSLEKILDFHQRHTGQTPAESDFQVLEIARKLE 191 >4N5C-A nrPDB Length = 802 Score = 32.5 bits (72), Expect = 0.65, Method: Composition-based stats. Identities = 34/244 (13%), Positives = 83/244 (34%), Gaps = 23/244 (9%) Query: 273 EFSLVSNFFNENFQKRPRQKLFEIQKKMFPQYWFELTQGFSLLFYGVGSKRNFLEEFAID 332 + +L+ F ++FE+ +FP EL +G K + +E+ + Sbjct: 575 QLALIEEIFGTLEALETLPEVFELYATLFPDSQPELN--------SMGPKYSQTKEYLLQ 626 Query: 333 YLSPKIAYSQLAYENELQQNKPVNSIPCLILNGY-NPSCNYRDVFKEITDLLVPAELTRS 391 + A + ++ + K + + + N +CN + + I L Sbjct: 627 MVWIFAANMYMRTKDNDEDAKAAIKEASNVESKFKNLNCNIANGYLSIIKDEPGVALKEF 686 Query: 392 ETK-YWGNHVILQIQKMIDFYKNQPLDIKLILV--VHNLDGPSIRKNTFQTMLSFLSVIR 448 ET Y+ + + + + + L ++ + + L + + L + Sbjct: 687 ETVLYYDENNLDALVGFAELIFPEELGVEETNLERYYTLSLTFVNDTDRSAAYARLKFLL 746 Query: 449 QIAIVASTDHIYAPLLWDNMKAQNYNFVFHDISNFEPSTVESTFQDVMKMGKSDTSSGAE 508 + AI+ S + Y+P +W ++ +E + ++K K + Sbjct: 747 ECAILESIEAYYSPEVW-----------WYLSLIYEKYQDDEYKNSLLKCIKYQELNPIR 795 Query: 509 GAKY 512 +Y Sbjct: 796 SLRY 799 >6D21-A nrPDB Length = 333 Score = 30.5 bits (67), Expect = 2.1, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 32/82 (39%) Query: 287 KRPRQKLFEIQKKMFPQYWFELTQGFSLLFYGVGSKRNFLEEFAIDYLSPKIAYSQLAYE 346 +RP LF + K FP +L + F+ + + KR+ L+ + + + Sbjct: 70 RRPMNTLFRLSVKFFPPDPGQLQEEFTRYLFSLQIKRDLLDGRLSCTENTAALLASHLVQ 129 Query: 347 NELQQNKPVNSIPCLILNGYNP 368 +E+ + L +N P Sbjct: 130 SEIGDYDDLADREFLKMNKLLP 151 >4QDG-A nrPDB Length = 310 Score = 30.5 bits (67), Expect = 2.4, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 27/74 (36%), Gaps = 2/74 (2%) Query: 537 GNLSANTGPKRGTQRTGVELKLFNHLCAADFIASNEI-ALRSMLREFIEHKMANITKNNS 595 NL N G F +A E+ R M+R++ K+ + + Sbjct: 185 NNLLENGMVTYTPWAQGQASAGFTDEGREVVVAYAELSTSRLMVRDWYSPKLT-VRRKAD 243 Query: 596 GMEIIWVPYTYAEL 609 G+EII +P L Sbjct: 244 GVEIINIPLINYLL 257 >6C0F-I nrPDB Length = 295 Score = 29.4 bits (64), Expect = 4.7, Method: Composition-based stats. Identities = 55/242 (22%), Positives = 90/242 (37%), Gaps = 59/242 (24%) Query: 95 DEKDTISSKKKRKLDKDTSGNVNEESKTSNNKQVMEK---TGIKEKREREKIQVA---TT 148 +E + + K++++ D N+E T K+ E+ ++E+R +E + T Sbjct: 5 NEINITNKLKRQEIFADIKHEKNKERHTMRRKRAKEERENPELREQRLKENVTQTIENTR 64 Query: 149 TYEDNVTPQTDDN-------FVSNSPEPPEPATPSKKSLTTN-------HDFTSPLKQII 194 Y++ + + + + F SNS EPP K LTTN ++F + L +I+ Sbjct: 65 VYDETINKEVEGDEDDLMRYFNSNSNEPP------KIFLTTNVNAKKSAYEFANILIEIL 118 Query: 195 MN----------NLKEYKDSTSPGKLTLSRNFTPTPVPKNKKLYQTSETKSASSFLDTFE 244 N LKE D + + RNFT + K T T F+ E Sbjct: 119 PNVTFVKRKFGYKLKEISD------ICIKRNFTDIVIINEDKKKVTGLT-----FIHLPE 167 Query: 245 G---YFDQRKIVRTNAKSRHTMSMAPDVTREEFSLVSNFFNENFQKRPRQKLFEIQKKMF 301 G YF V H S + NFQ R Q + + + + Sbjct: 168 GPTFYFKLSSFVEVKKIVGH---------GRPTSHIPELILNNFQTRLGQTVGRLFQSIL 218 Query: 302 PQ 303 PQ Sbjct: 219 PQ 220 >3F02-A nrPDB Length = 359 Score = 29.0 bits (63), Expect = 6.5, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 14/123 (11%) Query: 260 RHTMSMAPDVTREEFSLVSNFFNENFQKRPRQKLFEIQKKMFPQYWFELTQGFSLLFYGV 319 RH+M EEFS + F N K Q + +I +F Q F + + F Sbjct: 70 RHSMGYDSLKNGEEFSFLKEFSNMVTAKES-QYVMKIANSLFVQNGFHVNEEF------- 121 Query: 320 GSKRNFLEEF---AIDYLSPKIAYSQLAYENELQQNKPVNSIPCLILNGYNPSCNYRDVF 376 ++++ A++++ + Y N+ +N N + L+ + Y + Sbjct: 122 ---LQMMKKYFNAAVNHVDFSQNVAVANYINKWVENNTNNLVKDLVSPRDFDAATYLALI 178 Query: 377 KEI 379 + Sbjct: 179 NAV 181 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.311 0.123 0.321 Lambda K H 0.267 0.0385 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 21,160,408 Number of Sequences: 36641 Number of extensions: 799596 Number of successful extensions: 1983 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 21 Number of HSP's successfully gapped in prelim test: 39 Number of HSP's that attempted gapping in prelim test: 1852 Number of HSP's gapped (non-prelim): 113 length of query: 620 length of database: 10,336,785 effective HSP length: 103 effective length of query: 517 effective length of database: 6,562,762 effective search space: 3392947954 effective search space used: 3392947954 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 62 (28.6 bits)