BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= P32807
         (602 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

5Y58-A nrPDB                                                         1172   0.0  
6ERG-A nrPDB                                                           53   4e-07
1JEY-A nrPDB                                                           52   5e-07
5Y58-B nrPDB                                                           32   1.1  
3E6I-A nrPDB                                                           31   1.5  
2A98-A nrPDB                                                           29   6.4  

>5Y58-A nrPDB
          Length = 575

 Score = 1172 bits (3031), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 575/575 (100%), Positives = 575/575 (100%)

Query: 28  IHEGILFCIELSETMFKESSDLEYKSPLLEILESLDELMSQLVITRPGTAIGCYFYYCNR 87
           IHEGILFCIELSETMFKESSDLEYKSPLLEILESLDELMSQLVITRPGTAIGCYFYYCNR
Sbjct: 1   IHEGILFCIELSETMFKESSDLEYKSPLLEILESLDELMSQLVITRPGTAIGCYFYYCNR 60

Query: 88  EDAKEGIYELFPLRDINATFMKKLNDLLEDLSSGRISLYDYFMFQQTGSEKQVRLSVLFT 147
           EDAKEGIYELFPLRDINATFMKKLNDLLEDLSSGRISLYDYFMFQQTGSEKQVRLSVLFT
Sbjct: 61  EDAKEGIYELFPLRDINATFMKKLNDLLEDLSSGRISLYDYFMFQQTGSEKQVRLSVLFT 120

Query: 148 FMLDTFLEEIPGQKQLSNKRVFLFTDIDKPQEAQDIDERARLRRLTIDLFDNKVNFATFF 207
           FMLDTFLEEIPGQKQLSNKRVFLFTDIDKPQEAQDIDERARLRRLTIDLFDNKVNFATFF
Sbjct: 121 FMLDTFLEEIPGQKQLSNKRVFLFTDIDKPQEAQDIDERARLRRLTIDLFDNKVNFATFF 180

Query: 208 IGYADKPFDNEFYSDILQLGSHTNENTGLDSEFDGPSTKPIDAKYIKSRILRKKEVKRIM 267
           IGYADKPFDNEFYSDILQLGSHTNENTGLDSEFDGPSTKPIDAKYIKSRILRKKEVKRIM
Sbjct: 181 IGYADKPFDNEFYSDILQLGSHTNENTGLDSEFDGPSTKPIDAKYIKSRILRKKEVKRIM 240

Query: 268 FQCPLILDEKTNFIVGVKGYTMYTHEKAGVRYKLVYEHEDIRQEAYSKRKFLNPITGEDV 327
           FQCPLILDEKTNFIVGVKGYTMYTHEKAGVRYKLVYEHEDIRQEAYSKRKFLNPITGEDV
Sbjct: 241 FQCPLILDEKTNFIVGVKGYTMYTHEKAGVRYKLVYEHEDIRQEAYSKRKFLNPITGEDV 300

Query: 328 TGKTVKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFI 387
           TGKTVKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFI
Sbjct: 301 TGKTVKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFI 360

Query: 388 VPDEAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSSVKDYNEGFYLY 447
           VPDEAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSSVKDYNEGFYLY
Sbjct: 361 VPDEAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSSVKDYNEGFYLY 420

Query: 448 RVPFLDEIRKFPSLLSYDDGSEHKLDYDNMKKVTQSIMGYFNLRDGYNPSDFKNPLLQKH 507
           RVPFLDEIRKFPSLLSYDDGSEHKLDYDNMKKVTQSIMGYFNLRDGYNPSDFKNPLLQKH
Sbjct: 421 RVPFLDEIRKFPSLLSYDDGSEHKLDYDNMKKVTQSIMGYFNLRDGYNPSDFKNPLLQKH 480

Query: 508 YKVLHDYLLQIETTFDENETPNTKKDRMMREDDSLRKLYYIRNKILESEKSEDPIIQRLN 567
           YKVLHDYLLQIETTFDENETPNTKKDRMMREDDSLRKLYYIRNKILESEKSEDPIIQRLN
Sbjct: 481 YKVLHDYLLQIETTFDENETPNTKKDRMMREDDSLRKLYYIRNKILESEKSEDPIIQRLN 540

Query: 568 KYVKIWNMFYKKFNDDNISIKEEKKPFDKKPKFNI 602
           KYVKIWNMFYKKFNDDNISIKEEKKPFDKKPKFNI
Sbjct: 541 KYVKIWNMFYKKFNDDNISIKEEKKPFDKKPKFNI 575


>6ERG-A nrPDB
          Length = 544

 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 111/520 (21%), Positives = 204/520 (39%), Gaps = 71/520 (13%)

Query: 21  TGYRKFDIHEGILFCIELSETMFKESSDLEYKSPLLEILESLDELMSQLVITRPGTAIGC 80
           +G  K+   + ++F ++ S+ MF+  S+ E  +P    ++ +  +    +I+     +  
Sbjct: 27  SGDYKYSGRDSLIFLVDASKAMFESQSEDEL-TPFDMSIQCIQSVYISKIISSDRDLLAV 85

Query: 81  YFYYCNREDAKEGIYELFPLRDINATFMKKLNDLLEDLSSGRISLYDYFMFQQTGSEKQV 140
            FY   ++        ++ L++++    K++ +L            D F     G + Q 
Sbjct: 86  VFYGTEKDKNSVNFKNIYVLQELDNPGAKRILEL------------DQF----KGQQGQK 129

Query: 141 RLSVLFTFMLDTFLEEIPG---------QKQLSNKRVFLFTDIDKPQEAQDIDERARLRR 191
           R   +     D  L E+           Q ++S+KR+ LFT+ D P    D  + +R R 
Sbjct: 130 RFQDMMGHGSDYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPH-GNDSAKASRART 188

Query: 192 LTIDLFDNKVNFATFFIGYADKP--FD-NEFYSDILQLGSHTNENTGLDSEFDGPSTKPI 248
              DL D  +      + +  KP  FD + FY DI+ +     E+  L   F+  S    
Sbjct: 189 KAGDLRDTGIFLD---LMHLKKPGGFDISLFYRDIISIA----EDEDLRVHFEESSKLED 241

Query: 249 DAKYIKSRILRKKEVKRIMFQCPLILDEKTNFIVGVKGYTMYTHEKAGVRYKLVYE-HED 307
             + ++++  RK+ + R+  +         + ++ V  Y +          KL  E +E 
Sbjct: 242 LLRKVRAKETRKRALSRLKLKL------NKDIVISVGIYNLVQKALKPPPIKLYRETNEP 295

Query: 308 IRQEAYSKRKFLNPITGEDVTGKTVKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIG 367
           ++ +    R F     G  +   T +   YG   I L   + + +       D  L ++G
Sbjct: 296 VKTKT---RTFNTSTGGLLLPSDTKRSQIYGSRQIILEKEETEELKRF---DDPGLMLMG 349

Query: 368 FRSSS--KSIHYFNNIDKSSFIVPDEAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNS 425
           F+     K  HY      S F+ P+E+   GS    ++LL    +K+  A+     + N 
Sbjct: 350 FKPLVLLKKHHYLR---PSLFVYPEESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNI 406

Query: 426 HPSLYTLSPSS-------VKDYNEGFYLYRVPFLDEIRKFPSLLSYDDGSEHKLDYDNMK 478
            P    L P         ++    GF L  +PF D+ RK P         E       MK
Sbjct: 407 PPYFVALVPQEEELDDQKIQVTPPGFQLVFLPFADDKRKMPFTEKIMATPEQ---VGKMK 463

Query: 479 KVTQSIMGYFNLRDGYNPSDFKNPLLQKHYKVLHDYLLQI 518
            + +       LR  Y    F+NP+LQ+H++ L    L +
Sbjct: 464 AIVE------KLRFTYRSDSFENPVLQQHFRNLEALALDL 497


>1JEY-A nrPDB
          Length = 609

 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 111/520 (21%), Positives = 204/520 (39%), Gaps = 71/520 (13%)

Query: 21  TGYRKFDIHEGILFCIELSETMFKESSDLEYKSPLLEILESLDELMSQLVITRPGTAIGC 80
           +G  K+   + ++F ++ S+ MF+  S+ E  +P    ++ +  +    +I+     +  
Sbjct: 27  SGDYKYSGRDSLIFLVDASKAMFESQSEDEL-TPFDMSIQCIQSVYISKIISSDRDLLAV 85

Query: 81  YFYYCNREDAKEGIYELFPLRDINATFMKKLNDLLEDLSSGRISLYDYFMFQQTGSEKQV 140
            FY   ++        ++ L++++    K++ +L            D F     G + Q 
Sbjct: 86  VFYGTEKDKNSVNFKNIYVLQELDNPGAKRILEL------------DQF----KGQQGQK 129

Query: 141 RLSVLFTFMLDTFLEEIPG---------QKQLSNKRVFLFTDIDKPQEAQDIDERARLRR 191
           R   +     D  L E+           Q ++S+KR+ LFT+ D P    D  + +R R 
Sbjct: 130 RFQDMMGHGSDYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPH-GNDSAKASRART 188

Query: 192 LTIDLFDNKVNFATFFIGYADKP--FD-NEFYSDILQLGSHTNENTGLDSEFDGPSTKPI 248
              DL D  +      + +  KP  FD + FY DI+ +     E+  L   F+  S    
Sbjct: 189 KAGDLRDTGIFLD---LMHLKKPGGFDISLFYRDIISIA----EDEDLRVHFEESSKLED 241

Query: 249 DAKYIKSRILRKKEVKRIMFQCPLILDEKTNFIVGVKGYTMYTHEKAGVRYKLVYE-HED 307
             + ++++  RK+ + R+  +         + ++ V  Y +          KL  E +E 
Sbjct: 242 LLRKVRAKETRKRALSRLKLKL------NKDIVISVGIYNLVQKALKPPPIKLYRETNEP 295

Query: 308 IRQEAYSKRKFLNPITGEDVTGKTVKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIG 367
           ++ +    R F     G  +   T +   YG   I L   + + +       D  L ++G
Sbjct: 296 VKTKT---RTFNTSTGGLLLPSDTKRSQIYGSRQIILEKEETEELKRF---DDPGLMLMG 349

Query: 368 FRSSS--KSIHYFNNIDKSSFIVPDEAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNS 425
           F+     K  HY      S F+ P+E+   GS    ++LL    +K+  A+     + N 
Sbjct: 350 FKPLVLLKKHHYLR---PSLFVYPEESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNI 406

Query: 426 HPSLYTLSPSS-------VKDYNEGFYLYRVPFLDEIRKFPSLLSYDDGSEHKLDYDNMK 478
            P    L P         ++    GF L  +PF D+ RK P         E       MK
Sbjct: 407 PPYFVALVPQEEELDDQKIQVTPPGFQLVFLPFADDKRKMPFTEKIMATPEQ---VGKMK 463

Query: 479 KVTQSIMGYFNLRDGYNPSDFKNPLLQKHYKVLHDYLLQI 518
            + +       LR  Y    F+NP+LQ+H++ L    L +
Sbjct: 464 AIVE------KLRFTYRSDSFENPVLQQHFRNLEALALDL 497


>5Y58-B nrPDB
          Length = 628

 Score = 31.6 bits (70), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 63/142 (44%), Gaps = 17/142 (11%)

Query: 333 KVYPYG-DLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIVPD- 390
           K Y YG D  +  S   DQ V E++      L + GF +      YF    +SSFI  D 
Sbjct: 314 KAYRYGADYVVLPSVLVDQTVYESF----PGLDLRGFLNREALPRYFLT-SESSFITADT 368

Query: 391 EAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSP--------SSVKDYNE 442
               +  +   ++L+ ++ +  KIA+     K +S  ++  L P        +S K + +
Sbjct: 369 RLGCQSDLMAFSALVDVMLENRKIAVARYVSKKDSEVNMCALCPVLIEHSNINSEKKFVK 428

Query: 443 GFYLYRVPFLDEIR--KFPSLL 462
              L R+PF ++ R   FP LL
Sbjct: 429 SLTLCRLPFAEDERVTDFPKLL 450


>3E6I-A nrPDB
          Length = 476

 Score = 30.8 bits (68), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 440 YNEGFYLYRVPFLDEIRKFPSLLSYDDGSEHKL 472
           +NE F+L   P+L     FPS L Y  GS  K+
Sbjct: 182 FNENFHLLSTPWLQLYNNFPSFLHYLPGSHRKV 214


>2A98-A nrPDB
          Length = 259

 Score = 28.9 bits (63), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 7/58 (12%)

Query: 213 KPFDNEFYSDILQLGSHTNENTGLDSEFDGPSTKPIDAK-----YIKSRILRKKEVKR 265
           +PF   +Y  +LQ G   N+   L ++F+GPS   +D K     Y++  +++ +E  R
Sbjct: 26  RPFVPAYYGMVLQDGQTFNQMEDLLADFEGPSI--MDCKMGSRTYLEEELVKARERPR 81


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

5Y58-A nrPDB                                                          891   0.0  
1JEY-A nrPDB                                                          569   e-162
6ERG-A nrPDB                                                          569   e-162

Sequences not found previously or not previously below threshold:

5Y58-B nrPDB                                                           47   2e-05
4PSH-A nrPDB                                                           32   0.64 
3IC9-A nrPDB                                                           30   2.1  
4LC9-A nrPDB                                                           30   2.4  
2A98-A nrPDB                                                           30   2.7  
2AQX-A nrPDB                                                           29   4.9  
5JVP-A nrPDB                                                           29   7.6  

>5Y58-A nrPDB
          Length = 575

 Score =  891 bits (2303), Expect = 0.0,   Method: Composition-based stats.
 Identities = 575/575 (100%), Positives = 575/575 (100%)

Query: 28  IHEGILFCIELSETMFKESSDLEYKSPLLEILESLDELMSQLVITRPGTAIGCYFYYCNR 87
           IHEGILFCIELSETMFKESSDLEYKSPLLEILESLDELMSQLVITRPGTAIGCYFYYCNR
Sbjct: 1   IHEGILFCIELSETMFKESSDLEYKSPLLEILESLDELMSQLVITRPGTAIGCYFYYCNR 60

Query: 88  EDAKEGIYELFPLRDINATFMKKLNDLLEDLSSGRISLYDYFMFQQTGSEKQVRLSVLFT 147
           EDAKEGIYELFPLRDINATFMKKLNDLLEDLSSGRISLYDYFMFQQTGSEKQVRLSVLFT
Sbjct: 61  EDAKEGIYELFPLRDINATFMKKLNDLLEDLSSGRISLYDYFMFQQTGSEKQVRLSVLFT 120

Query: 148 FMLDTFLEEIPGQKQLSNKRVFLFTDIDKPQEAQDIDERARLRRLTIDLFDNKVNFATFF 207
           FMLDTFLEEIPGQKQLSNKRVFLFTDIDKPQEAQDIDERARLRRLTIDLFDNKVNFATFF
Sbjct: 121 FMLDTFLEEIPGQKQLSNKRVFLFTDIDKPQEAQDIDERARLRRLTIDLFDNKVNFATFF 180

Query: 208 IGYADKPFDNEFYSDILQLGSHTNENTGLDSEFDGPSTKPIDAKYIKSRILRKKEVKRIM 267
           IGYADKPFDNEFYSDILQLGSHTNENTGLDSEFDGPSTKPIDAKYIKSRILRKKEVKRIM
Sbjct: 181 IGYADKPFDNEFYSDILQLGSHTNENTGLDSEFDGPSTKPIDAKYIKSRILRKKEVKRIM 240

Query: 268 FQCPLILDEKTNFIVGVKGYTMYTHEKAGVRYKLVYEHEDIRQEAYSKRKFLNPITGEDV 327
           FQCPLILDEKTNFIVGVKGYTMYTHEKAGVRYKLVYEHEDIRQEAYSKRKFLNPITGEDV
Sbjct: 241 FQCPLILDEKTNFIVGVKGYTMYTHEKAGVRYKLVYEHEDIRQEAYSKRKFLNPITGEDV 300

Query: 328 TGKTVKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFI 387
           TGKTVKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFI
Sbjct: 301 TGKTVKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFI 360

Query: 388 VPDEAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSSVKDYNEGFYLY 447
           VPDEAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSSVKDYNEGFYLY
Sbjct: 361 VPDEAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSSVKDYNEGFYLY 420

Query: 448 RVPFLDEIRKFPSLLSYDDGSEHKLDYDNMKKVTQSIMGYFNLRDGYNPSDFKNPLLQKH 507
           RVPFLDEIRKFPSLLSYDDGSEHKLDYDNMKKVTQSIMGYFNLRDGYNPSDFKNPLLQKH
Sbjct: 421 RVPFLDEIRKFPSLLSYDDGSEHKLDYDNMKKVTQSIMGYFNLRDGYNPSDFKNPLLQKH 480

Query: 508 YKVLHDYLLQIETTFDENETPNTKKDRMMREDDSLRKLYYIRNKILESEKSEDPIIQRLN 567
           YKVLHDYLLQIETTFDENETPNTKKDRMMREDDSLRKLYYIRNKILESEKSEDPIIQRLN
Sbjct: 481 YKVLHDYLLQIETTFDENETPNTKKDRMMREDDSLRKLYYIRNKILESEKSEDPIIQRLN 540

Query: 568 KYVKIWNMFYKKFNDDNISIKEEKKPFDKKPKFNI 602
           KYVKIWNMFYKKFNDDNISIKEEKKPFDKKPKFNI
Sbjct: 541 KYVKIWNMFYKKFNDDNISIKEEKKPFDKKPKFNI 575


>1JEY-A nrPDB
          Length = 609

 Score =  569 bits (1467), Expect = e-162,   Method: Composition-based stats.
 Identities = 111/520 (21%), Positives = 204/520 (39%), Gaps = 71/520 (13%)

Query: 21  TGYRKFDIHEGILFCIELSETMFKESSDLEYKSPLLEILESLDELMSQLVITRPGTAIGC 80
           +G  K+   + ++F ++ S+ MF+  S+ E  +P    ++ +  +    +I+     +  
Sbjct: 27  SGDYKYSGRDSLIFLVDASKAMFESQSEDEL-TPFDMSIQCIQSVYISKIISSDRDLLAV 85

Query: 81  YFYYCNREDAKEGIYELFPLRDINATFMKKLNDLLEDLSSGRISLYDYFMFQQTGSEKQV 140
            FY   ++        ++ L++++    K++ +L            D F     G + Q 
Sbjct: 86  VFYGTEKDKNSVNFKNIYVLQELDNPGAKRILEL------------DQF----KGQQGQK 129

Query: 141 RLSVLFTFMLDTFLEEIPG---------QKQLSNKRVFLFTDIDKPQEAQDIDERARLRR 191
           R   +     D  L E+           Q ++S+KR+ LFT+ D P    D  + +R R 
Sbjct: 130 RFQDMMGHGSDYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPH-GNDSAKASRART 188

Query: 192 LTIDLFDNKVNFATFFIGYADKP--FD-NEFYSDILQLGSHTNENTGLDSEFDGPSTKPI 248
              DL D  +      + +  KP  FD + FY DI+ +     E+  L   F+  S    
Sbjct: 189 KAGDLRDTGIFLD---LMHLKKPGGFDISLFYRDIISIA----EDEDLRVHFEESSKLED 241

Query: 249 DAKYIKSRILRKKEVKRIMFQCPLILDEKTNFIVGVKGYTMYTHEKAGVRYKLVYE-HED 307
             + ++++  RK+ + R+  +         + ++ V  Y +          KL  E +E 
Sbjct: 242 LLRKVRAKETRKRALSRLKLKL------NKDIVISVGIYNLVQKALKPPPIKLYRETNEP 295

Query: 308 IRQEAYSKRKFLNPITGEDVTGKTVKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIG 367
           ++ +    R F     G  +   T +   YG   I L   + + +       D  L ++G
Sbjct: 296 VKTKT---RTFNTSTGGLLLPSDTKRSQIYGSRQIILEKEETEELKRF---DDPGLMLMG 349

Query: 368 FRSSS--KSIHYFNNIDKSSFIVPDEAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNS 425
           F+     K  HY      S F+ P+E+   GS    ++LL    +K+  A+     + N 
Sbjct: 350 FKPLVLLKKHHYLR---PSLFVYPEESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNI 406

Query: 426 HPSLYTLSPSS-------VKDYNEGFYLYRVPFLDEIRKFPSLLSYDDGSEHKLDYDNMK 478
            P    L P         ++    GF L  +PF D+ RK P         E       MK
Sbjct: 407 PPYFVALVPQEEELDDQKIQVTPPGFQLVFLPFADDKRKMPFTEKIMATPEQ---VGKMK 463

Query: 479 KVTQSIMGYFNLRDGYNPSDFKNPLLQKHYKVLHDYLLQI 518
            + +       LR  Y    F+NP+LQ+H++ L    L +
Sbjct: 464 AIVE------KLRFTYRSDSFENPVLQQHFRNLEALALDL 497


>6ERG-A nrPDB
          Length = 544

 Score =  569 bits (1466), Expect = e-162,   Method: Composition-based stats.
 Identities = 111/520 (21%), Positives = 204/520 (39%), Gaps = 71/520 (13%)

Query: 21  TGYRKFDIHEGILFCIELSETMFKESSDLEYKSPLLEILESLDELMSQLVITRPGTAIGC 80
           +G  K+   + ++F ++ S+ MF+  S+ E  +P    ++ +  +    +I+     +  
Sbjct: 27  SGDYKYSGRDSLIFLVDASKAMFESQSEDEL-TPFDMSIQCIQSVYISKIISSDRDLLAV 85

Query: 81  YFYYCNREDAKEGIYELFPLRDINATFMKKLNDLLEDLSSGRISLYDYFMFQQTGSEKQV 140
            FY   ++        ++ L++++    K++ +L            D F     G + Q 
Sbjct: 86  VFYGTEKDKNSVNFKNIYVLQELDNPGAKRILEL------------DQF----KGQQGQK 129

Query: 141 RLSVLFTFMLDTFLEEIPG---------QKQLSNKRVFLFTDIDKPQEAQDIDERARLRR 191
           R   +     D  L E+           Q ++S+KR+ LFT+ D P    D  + +R R 
Sbjct: 130 RFQDMMGHGSDYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPH-GNDSAKASRART 188

Query: 192 LTIDLFDNKVNFATFFIGYADKP--FD-NEFYSDILQLGSHTNENTGLDSEFDGPSTKPI 248
              DL D  +      + +  KP  FD + FY DI+ +     E+  L   F+  S    
Sbjct: 189 KAGDLRDTGIFLD---LMHLKKPGGFDISLFYRDIISIA----EDEDLRVHFEESSKLED 241

Query: 249 DAKYIKSRILRKKEVKRIMFQCPLILDEKTNFIVGVKGYTMYTHEKAGVRYKLVYE-HED 307
             + ++++  RK+ + R+  +         + ++ V  Y +          KL  E +E 
Sbjct: 242 LLRKVRAKETRKRALSRLKLKL------NKDIVISVGIYNLVQKALKPPPIKLYRETNEP 295

Query: 308 IRQEAYSKRKFLNPITGEDVTGKTVKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIG 367
           ++ +    R F     G  +   T +   YG   I L   + + +       D  L ++G
Sbjct: 296 VKTKT---RTFNTSTGGLLLPSDTKRSQIYGSRQIILEKEETEELKRF---DDPGLMLMG 349

Query: 368 FRSSS--KSIHYFNNIDKSSFIVPDEAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNS 425
           F+     K  HY      S F+ P+E+   GS    ++LL    +K+  A+     + N 
Sbjct: 350 FKPLVLLKKHHYLR---PSLFVYPEESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNI 406

Query: 426 HPSLYTLSPSS-------VKDYNEGFYLYRVPFLDEIRKFPSLLSYDDGSEHKLDYDNMK 478
            P    L P         ++    GF L  +PF D+ RK P         E       MK
Sbjct: 407 PPYFVALVPQEEELDDQKIQVTPPGFQLVFLPFADDKRKMPFTEKIMATPEQ---VGKMK 463

Query: 479 KVTQSIMGYFNLRDGYNPSDFKNPLLQKHYKVLHDYLLQI 518
            + +       LR  Y    F+NP+LQ+H++ L    L +
Sbjct: 464 AIVE------KLRFTYRSDSFENPVLQQHFRNLEALALDL 497


>5Y58-B nrPDB
          Length = 628

 Score = 47.4 bits (111), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 91/555 (16%), Positives = 190/555 (34%), Gaps = 74/555 (13%)

Query: 30  EGILFCIELSETMFKESSDLEYKSPLLEILESLDELMSQLVITRPGTAIGCYFYYCNRED 89
           E   F +++S +M K ++  +  + L   L      +++   +R    I CY   C   +
Sbjct: 3   ESTTFIVDVSPSMMKNNNVSKSMAYLEYTL------LNKSKKSRKTDWISCYLANCPVSE 56

Query: 90  AKEGIYELFPLRDINATFMKKLNDLLEDLSSGRISLYDYFMFQQTGSEKQVRLSVLFTFM 149
             + I  +F ++   A        +    + G I     +  Q +       L  +   +
Sbjct: 57  NSQEIPNVFQIQSFLAP-------VTTTATIGFIKRLKQYCDQHSHDSSNEGLQSMIQCL 109

Query: 150 LDTFLEEIPGQKQLSN--KRVFLFTD-------------------------IDKPQEAQD 182
           L   L +I  Q Q     K++ +FTD                         ID  ++ Q+
Sbjct: 110 LVVSL-DIKQQFQARKILKQIVVFTDNLDDLDITDEEIDLLTEELSTRIILIDCGKDTQE 168

Query: 183 IDERARLRRLTIDLFDNKVNFATFFIGYADKPFDNEFYSDILQLGSHTNENTGLDSEFDG 242
             +++   +L   + ++++      +     P  +      +  G        L ++   
Sbjct: 169 ERKKSNWLKLVEAIPNSRIYNMNELLVEITSPATSVVKPVRVFSGELRLGADILSTQTSN 228

Query: 243 PSTKPIDAKYIKSRILR---KKEVKRIMFQCPLILDEKTNFIVGVKGYTMYTHEKAGVRY 299
           PS    D   +  ++      K V  +  +  + +++       V   ++  +E      
Sbjct: 229 PSGSMQDENCLCIKVEAFPATKAVSGLNRKTAVEVEDSQKKERYVGVKSIIEYEI----- 283

Query: 300 KLVYEHEDIRQEAYSKRKFLNPITGEDVTGKTV-KVYPYGDLDINL-SDSQDQIVMEAYT 357
                +E  ++      +  +      ++  +V K Y YG   + L S   DQ V E++ 
Sbjct: 284 ----HNEGNKKNVSEDDQSGSSYIPVTISKDSVTKAYRYGADYVVLPSVLVDQTVYESF- 338

Query: 358 QKDAFLKIIGFRSSSKSIHYFNNIDKSSFIVPDEAK-YEGSIRTLASLLKILRKKDKIAI 416
                L + GF +      YF    +SSFI  D     +  +   ++L+ ++ +  KIA+
Sbjct: 339 ---PGLDLRGFLNREALPRYF-LTSESSFITADTRLGCQSDLMAFSALVDVMLENRKIAV 394

Query: 417 LWGKLKSNSHPSLYTLSPSSVKDYN--------EGFYLYRVPFLDEIRKFPSLLSYDDGS 468
                K +S  ++  L P  ++  N        +   L R+PF ++ R        D  +
Sbjct: 395 ARYVSKKDSEVNMCALCPVLIEHSNINSEKKFVKSLTLCRLPFAEDERVTDFPKLLDRTT 454

Query: 469 EHKLDYDNMKKVTQSIMGYFNLRDGYNPSDFKNPLLQKHYKVLHDYLLQIETTFDENETP 528
              +         Q         D  +  +     L  +Y+ + +      TT      P
Sbjct: 455 TSGVPLKKETDGHQIDELMEQFVDSMDTDELPEIPLGNYYQPIGEVTTD--TTL---PLP 509

Query: 529 NTKKDRMMREDDSLR 543
           +  KD+   + D LR
Sbjct: 510 SLNKDQEENKKDPLR 524


>4PSH-A nrPDB
          Length = 227

 Score = 32.4 bits (72), Expect = 0.64,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 68/184 (36%), Gaps = 28/184 (15%)

Query: 248 IDAKYIKSRILRKKEVKRIMFQ--CPLILDEKTNFIVGVKGYTMYTHEKAGVRYK----- 300
             AK I  R+  + ++  + F    P +L +K + I+   G T+    K  V +      
Sbjct: 37  DLAKEIARRLGVELKIVDMTFDGLIPSLLTKKIDVIIS--GMTITEERKKVVAFSDPYFD 94

Query: 301 -----LVYEHEDIRQEAYSKRKFLNPITGEDVTGKTVKVYPYGDLDINLSDSQDQIVMEA 355
                +V +  D R + Y           ED+ GKTV V      DI +S      V+  
Sbjct: 95  AGQVIVVRKDSDFRPKTY-----------EDLVGKTVAVQIGTTGDIEVSKYDGIKVVRF 143

Query: 356 YTQKDAFLKIIGFRSSSKSIHYFNNIDKSSFIVPDEAKYEGSIRTLASLLKILRKKDKIA 415
               DAFL++   R+ +      ++    +F+  +      S    +    I  +K+   
Sbjct: 144 DKFTDAFLELKRGRADAV---VLDSATARAFVAKNPDLVISSGVLSSEQYGIAVRKEDTD 200

Query: 416 ILWG 419
           +L  
Sbjct: 201 LLEF 204


>3IC9-A nrPDB
          Length = 492

 Score = 30.5 bits (67), Expect = 2.1,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 3/73 (4%)

Query: 210 YADKPFDNEFYSDILQLGSHTNENTGL--DSEFDGPSTKPIDA-KYIKSRILRKKEVKRI 266
           YA+K F+ EFY D       T E         FD    K  ++ +Y+ +   RK  V ++
Sbjct: 220 YAEKTFNEEFYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKANVDKL 279

Query: 267 MFQCPLILDEKTN 279
             +   I  +K N
Sbjct: 280 GLENTSIELDKKN 292


>4LC9-A nrPDB
          Length = 636

 Score = 30.5 bits (67), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/45 (37%), Positives = 22/45 (48%)

Query: 146 FTFMLDTFLEEIPGQKQLSNKRVFLFTDIDKPQEAQDIDERARLR 190
           FTF  D FL  I      ++  VF+FT  D   E Q + ER R +
Sbjct: 385 FTFSQDDFLTSILPSLTETDTVVFIFTLDDNLTEVQALAERVREK 429


>2A98-A nrPDB
          Length = 259

 Score = 30.1 bits (66), Expect = 2.7,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 11/98 (11%)

Query: 213 KPFDNEFYSDILQLGSHTNENTGLDSEFDGPSTKPIDA---KYIKSRILRKKEVKRIMFQ 269
           +PF   +Y  +LQ G   N+   L ++F+GPS          Y++  +++ +E  R    
Sbjct: 26  RPFVPAYYGMVLQDGQTFNQMEDLLADFEGPSIMDCKMGSRTYLEEELVKARERPR---- 81

Query: 270 CPLILDEKTNFIVGVKGYTMYTHEKAG---VRYKLVYE 304
            P     +    V     T   H +      RY    E
Sbjct: 82  -PRKDMYEKMVAVDPGAPTPEEHAQGAVTKPRYMQWRE 118


>2AQX-A nrPDB
          Length = 289

 Score = 29.3 bits (64), Expect = 4.9,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 59/174 (33%), Gaps = 32/174 (18%)

Query: 213 KPFDNEFYSDILQLGSHTNENTGLDSEFDGP----------STKPIDAKYIKSRILRKKE 262
           +PF   ++ D+++ G   N+   L ++FD P          +    +    + +   +K+
Sbjct: 56  RPFVPAYHGDVVKDGERYNQMDDLLADFDSPCVMDCKMGVRTYLEEELTKARKKPSLRKD 115

Query: 263 VKRIMFQCPLILDEKTNFIVGVKGYTMYTHEKAGVRYKLVYEH-----------EDIRQE 311
           + + M +       +                    RY    E            E I++E
Sbjct: 116 MYQKMVEVDPEAPTEEE---------KAQRAVTKPRYMQWRETISSTATLGFRIEGIKKE 166

Query: 312 AYS-KRKFLNPITGEDVTGKTVKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLK 364
             S  R F    T E VT +  + +  G+ +I ++       + A  +   F K
Sbjct: 167 DGSVNRDFKKTKTREQVT-EAFREFTKGNQNILIAYRDRLKAIRATLEISPFFK 219


>5JVP-A nrPDB
          Length = 90

 Score = 28.5 bits (62), Expect = 7.6,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 1/73 (1%)

Query: 495 NPSDFKNPLLQKHYKVLHDYLLQIETTFDENETPNTKKDRMMREDD-SLRKLYYIRNKIL 553
           N       LL+++ K + D   Q+E    E      +KD++ +E D    KL  I     
Sbjct: 3   NEVSTDEALLKRYRKEIMDLKKQLEEVSLETRAQAMEKDQLEKERDFYFGKLRNIELICQ 62

Query: 554 ESEKSEDPIIQRL 566
           E+E   DP++QR+
Sbjct: 63  ENEGENDPVLQRI 75


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.314    0.129    0.335 

Lambda     K      H
   0.267   0.0396    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,972,907
Number of Sequences: 36641
Number of extensions: 880302
Number of successful extensions: 2468
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 2427
Number of HSP's gapped (non-prelim): 35
length of query: 602
length of database: 10,336,785
effective HSP length: 103
effective length of query: 499
effective length of database: 6,562,762
effective search space: 3274818238
effective search space used: 3274818238
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 62 (28.5 bits)