BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P32780 (548 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6O9L-1 nrPDB 1148 0.0 6NMI-C nrPDB 724 0.0 5XV8-B nrPDB 226 3e-59 2DII-A nrPDB 104 8e-23 5OQM-1 nrPDB 59 7e-09 5OQJ-1 nrPDB 56 3e-08 1MJG-A nrPDB 33 0.29 5GUP-l nrPDB 30 1.8 2KT0-A nrPDB 30 1.9 2Z2M-B nrPDB 30 2.6 1QME-A nrPDB 30 2.7 1SUR-A nrPDB 29 5.8 4RBO-A nrPDB 29 5.9 2O8V-A nrPDB 29 6.1 5Z16-A nrPDB 28 7.9 >6O9L-1 nrPDB Length = 548 Score = 1148 bits (2970), Expect = 0.0, Method: Compositional matrix adjust. Identities = 548/548 (100%), Positives = 548/548 (100%) Query: 1 MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK 60 MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK Sbjct: 1 MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK 60 Query: 61 AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE 120 AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE Sbjct: 61 AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE 120 Query: 121 DPVLFQLYKDLVVSQVISAEEFWANRLNVNATDSSSTSNHKQDVGISAAFLADVRPQTDG 180 DPVLFQLYKDLVVSQVISAEEFWANRLNVNATDSSSTSNHKQDVGISAAFLADVRPQTDG Sbjct: 121 DPVLFQLYKDLVVSQVISAEEFWANRLNVNATDSSSTSNHKQDVGISAAFLADVRPQTDG 180 Query: 181 CNGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYFHRDRLNTGSK 240 CNGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYFHRDRLNTGSK Sbjct: 181 CNGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYFHRDRLNTGSK 240 Query: 241 DLFAECAKIDEKGLKTMVSLGVKNPLLDLTALEDKPLDEGYGISSVPSASNSKSIKENSN 300 DLFAECAKIDEKGLKTMVSLGVKNPLLDLTALEDKPLDEGYGISSVPSASNSKSIKENSN Sbjct: 241 DLFAECAKIDEKGLKTMVSLGVKNPLLDLTALEDKPLDEGYGISSVPSASNSKSIKENSN 300 Query: 301 AAIIKRFNHHSAMVLAAGLRKQEAQNEQTSEPSNMDGNSGDADCFQPAVKRAKLQESIEY 360 AAIIKRFNHHSAMVLAAGLRKQEAQNEQTSEPSNMDGNSGDADCFQPAVKRAKLQESIEY Sbjct: 301 AAIIKRFNHHSAMVLAAGLRKQEAQNEQTSEPSNMDGNSGDADCFQPAVKRAKLQESIEY 360 Query: 361 EDLGKNNSVKTIALNLKKSDRYYHGPTPIQSLQYATSQDIINSFQSIRQEMEAYTPKLTQ 420 EDLGKNNSVKTIALNLKKSDRYYHGPTPIQSLQYATSQDIINSFQSIRQEMEAYTPKLTQ Sbjct: 361 EDLGKNNSVKTIALNLKKSDRYYHGPTPIQSLQYATSQDIINSFQSIRQEMEAYTPKLTQ 420 Query: 421 VLSSSAASSTITALSPGGALMQGGTQQAINQMVPNDIQSELKHLYVAVGELLRHFWSCFP 480 VLSSSAASSTITALSPGGALMQGGTQQAINQMVPNDIQSELKHLYVAVGELLRHFWSCFP Sbjct: 421 VLSSSAASSTITALSPGGALMQGGTQQAINQMVPNDIQSELKHLYVAVGELLRHFWSCFP 480 Query: 481 VNTPFLEEKVVKMKSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKLHTWQ 540 VNTPFLEEKVVKMKSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKLHTWQ Sbjct: 481 VNTPFLEEKVVKMKSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKLHTWQ 540 Query: 541 SRRLMKKT 548 SRRLMKKT Sbjct: 541 SRRLMKKT 548 >6NMI-C nrPDB Length = 548 Score = 724 bits (1870), Expect = 0.0, Method: Compositional matrix adjust. Identities = 378/539 (70%), Positives = 378/539 (70%) Query: 1 MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK 60 MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK Sbjct: 1 MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK 60 Query: 61 AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE 120 AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE Sbjct: 61 AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE 120 Query: 121 DPVLFQLYKDLVVSQVISAEEFWANRLNVNATDSSSTSNHKQDVGISAAFLADVRPQTDG 180 DPVLFQLYKDLVVSQVISAEEFWANRL VRPQTDG Sbjct: 121 DPVLFQLYKDLVVSQVISAEEFWANRLXXXXXXXXXXXXXXXXXXXXXXXXXXVRPQTDG 180 Query: 181 CNGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYFHRDRLNTGSK 240 CN SDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYFHR Sbjct: 181 CNXXXXXXXSDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYFHRXXXXXXXX 240 Query: 241 DLFAECAKIDEKGLKTMVSLGVKNPLLDLTALEDKPLDEGYGISSVPSASNSKSIKENSN 300 ENSN Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENSN 300 Query: 301 AAIIKRFNHHSAMVLAAGLRKQEAQNEQTSEPSNMDGNSGDADCFQPAVKRAKLQESIEY 360 AAIIKRFNHHSAMVLAAGLRKQEAQNEQTSEPSNMDGNSGDADCFQPAVKRAKLQESIEY Sbjct: 301 AAIIKRFNHHSAMVLAAGLRKQEAQNEQTSEPSNMDGNSGDADCFQPAVKRAKLQESIEY 360 Query: 361 EDLGKNNSVKTIALNLKKSDRYYHGPTPIQSLQYATSQDIINSFQSIRQEMEAYTPKLTQ 420 EDLG IALNLKKSDRYYHGPTPI TSQDIINSFQSIRQEMEAYTPKLTQ Sbjct: 361 EDLGXXXXXXXIALNLKKSDRYYHGPTPIXXXXXXTSQDIINSFQSIRQEMEAYTPKLTQ 420 Query: 421 VLSSSAASSTITALSPGGALMQGGTQQAINQMVPNDIQSELKHLYVAVGELLRHFWSCFP 480 VLSSSAASSTITALSPGGALMQ VPNDIQSELKHLYVAVGELLRHFWSCF Sbjct: 421 VLSSSAASSTITALSPGGALMQXXXXXXXXXXVPNDIQSELKHLYVAVGELLRHFWSCFX 480 Query: 481 VNTPFLEEKVVKMKSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKLHTW 539 LVSHIEEMLQTAYNKLHTW Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVSHIEEMLQTAYNKLHTW 539 >5XV8-B nrPDB Length = 110 Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 108/108 (100%), Positives = 108/108 (100%) Query: 1 MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK 60 MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK Sbjct: 3 MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK 62 Query: 61 AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKAN 108 AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKAN Sbjct: 63 AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKAN 110 >2DII-A nrPDB Length = 61 Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 50/54 (92%), Positives = 51/54 (94%) Query: 103 FKRKANKELEEKNRMLQEDPVLFQLYKDLVVSQVISAEEFWANRLNVNATDSSS 156 FKRKANKELEEKNRMLQEDPVLFQLYKDLVVSQVISAEEFWANRLNVN+ SS Sbjct: 8 FKRKANKELEEKNRMLQEDPVLFQLYKDLVVSQVISAEEFWANRLNVNSGPSSG 61 >5OQM-1 nrPDB Length = 510 Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 41/169 (24%), Positives = 69/169 (40%), Gaps = 21/169 (12%) Query: 77 FHFSNESTAVKERDAVKDLLQQLLPKFK-------------RKANKELEEKNRMLQEDPV 123 F F+N + D +K LQQ++ ++K L+ + +L+ + V Sbjct: 89 FSFNNRTVM----DNIKMTLQQIISRYKDADIYEEKRXXXXXXXXTNLKLQQSLLKGNKV 144 Query: 124 LFQLYKDLVVSQVISAEEFWANRLNVNATDSSSTSNHKQDVGISAAFLADVRPQTDGCNG 183 L +++++ V++ + EFW+ R+ + Sbjct: 145 LMKVFQETVINAGLPPSEFWSTRIPLLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--- 201 Query: 184 LRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYFHR 232 NL+ + I +IF YP VK Y +NVP N E EFW RFF S F + Sbjct: 202 -XXNLSREKILNIFENYPIVKKAYTDNVPKNFKEPEFWARFFSSKLFRK 249 >5OQJ-1 nrPDB Length = 641 Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 4/129 (3%) Query: 104 KRKANKELEEKNRMLQEDPVLFQLYKDLVVSQVISAEEFWANRLNVNATDSSSTSNHKQD 163 K K L+ + +L+ + VL +++++ V++ + EFW+ R+ + Sbjct: 171 KEKLLTNLKLQQSLLKGNKVLMKVFQETVINAGLPPSEFWSTRIPLLRXXXXXXXXXXXX 230 Query: 164 VGISAAFLADVRPQTDGCNGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTR 223 NL+ + I +IF YP VK Y +NVP N E EFW R Sbjct: 231 XXXXXXXXXXXXXXXXX----XXNLSREKILNIFENYPIVKKAYTDNVPKNFKEPEFWAR 286 Query: 224 FFQSHYFHR 232 FF S F + Sbjct: 287 FFSSKLFRK 295 >1MJG-A nrPDB Length = 674 Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust. Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 4/89 (4%) Query: 255 KTMVSLGVKNPLLDLT-ALEDKPLDEGYGISSVPSASNSKSIKENSNAAIIKRFNHHSAM 313 K + + +NP+ L A+ D L G++ + +N K ++NS+ ++K ++ Sbjct: 438 KLLATQNAQNPIRVLNQAILDGEL---AGVALICGCNNLKGFQDNSHLTVMKELLKNNVF 494 Query: 314 VLAAGLRKQEAQNEQTSEPSNMDGNSGDA 342 V+A G Q A +P+N++ GD Sbjct: 495 VVATGCSAQAAGKLGLLDPANVETYCGDG 523 >5GUP-l nrPDB Length = 606 Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 9/87 (10%) Query: 385 GPTPIQSLQYATSQDIINSFQSIRQEMEAYTPKLTQ--VLSSSAASSTITALSPGGALMQ 442 GPTP+ +L ++++ + F IR T KL Q L A ++ TAL Sbjct: 239 GPTPVSALLHSSTMVVAGVFLLIRFYPLMETNKLVQTMTLCLGAITTLFTALC------- 291 Query: 443 GGTQQAINQMVPNDIQSELKHLYVAVG 469 TQ I ++V S+L + V +G Sbjct: 292 AITQNDIKKIVAFSTSSQLGLMMVTIG 318 >2KT0-A nrPDB Length = 84 Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%) Query: 487 EEKV-VKMKSNLERFQVTKLCPFQEKIRRQ-YLSTNLVSHIEEMLQTAYNKLHTW-QSRR 543 E+KV VK + F T+LC ++ +RQ YLS + + +L +Y ++ TW Q++R Sbjct: 15 EDKVPVKKQKTRTVFSSTQLCVLNDRFQRQKYLSLQQMQELSNILNLSYKQVKTWFQNQR 74 Query: 544 LMKK 547 + K Sbjct: 75 MKSK 78 >2Z2M-B nrPDB Length = 385 Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust. Identities = 12/31 (38%), Positives = 21/31 (67%) Query: 493 MKSNLERFQVTKLCPFQEKIRRQYLSTNLVS 523 + S L+ F T++ FQEK++ +Y++ LVS Sbjct: 25 ISSPLQSFMETQMDAFQEKVKGKYMTATLVS 55 >1QME-A nrPDB Length = 702 Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust. Identities = 12/31 (38%), Positives = 21/31 (67%) Query: 493 MKSNLERFQVTKLCPFQEKIRRQYLSTNLVS 523 + S L+ F T++ FQEK++ +Y++ LVS Sbjct: 217 ISSPLQSFMETQMDAFQEKVKGKYMTATLVS 247 >1SUR-A nrPDB Length = 215 Score = 28.9 bits (63), Expect = 5.8, Method: Compositional matrix adjust. Identities = 24/109 (22%), Positives = 49/109 (44%), Gaps = 21/109 (19%) Query: 416 PKLTQVLSSSAASSTITALS------------PGGALMQG--GTQQAINQMVPNDIQSEL 461 PK+ ++L+ + ++ + L PG ++ G Q A++ + N I+ ++ Sbjct: 12 PKVDRILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIRPDI 71 Query: 462 KHLYVAVGELLRHFWSCFPVNTPFLEEKVVKMKSNLERFQVTKLCPFQE 510 + G L FP F++E K+K NL+ ++ T+ +QE Sbjct: 72 PVILTDTGYL-------FPETYRFIDELTDKLKLNLKVYRATESAAWQE 113 >4RBO-A nrPDB Length = 70 Score = 28.9 bits (63), Expect = 5.9, Method: Compositional matrix adjust. Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 2/50 (4%) Query: 500 FQVTKLCPFQEKIRRQ-YLSTNLVSHIEEMLQTAYNKLHTW-QSRRLMKK 547 F T+LC ++ +RQ YLS + + +L +Y ++ TW Q++R+ K Sbjct: 10 FSSTQLCVLNDRFQRQKYLSLQQMQELSNILNLSYKQVKTWFQNQRMKSK 59 >2O8V-A nrPDB Length = 252 Score = 28.9 bits (63), Expect = 6.1, Method: Compositional matrix adjust. Identities = 24/109 (22%), Positives = 49/109 (44%), Gaps = 21/109 (19%) Query: 416 PKLTQVLSSSAASSTITALS------------PGGALMQG--GTQQAINQMVPNDIQSEL 461 PK+ ++L+ + ++ + L PG ++ G Q A++ + N I+ ++ Sbjct: 13 PKVDRILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIRPDI 72 Query: 462 KHLYVAVGELLRHFWSCFPVNTPFLEEKVVKMKSNLERFQVTKLCPFQE 510 + G L FP F++E K+K NL+ ++ T+ +QE Sbjct: 73 PVILTDTGYL-------FPETYRFIDELTDKLKLNLKVYRATESAAWQE 114 >5Z16-A nrPDB Length = 751 Score = 28.5 bits (62), Expect = 7.9, Method: Compositional matrix adjust. Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 3/34 (8%) Query: 198 RTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYFH 231 R PA YA+ PH+M+E W ++ Q+H H Sbjct: 153 RRAPAAVKNYAKKHPHSMSE---WKQWSQTHVSH 183 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6O9L-1 nrPDB 1065 0.0 6NMI-C nrPDB 680 0.0 5XV8-B nrPDB 213 2e-55 5OQM-1 nrPDB 172 3e-43 5OQJ-1 nrPDB 152 5e-37 2DII-A nrPDB 87 2e-17 Sequences not found previously or not previously below threshold: 2M14-A nrPDB 40 0.002 1MJG-A nrPDB 33 0.37 2KT0-A nrPDB 32 0.84 4RBO-A nrPDB 31 1.5 5GUP-l nrPDB 30 3.3 4I6J-B nrPDB 29 4.5 2VI6-A nrPDB 29 4.5 4GYK-A nrPDB 29 4.8 5OF3-B nrPDB 29 5.8 2O8V-A nrPDB 29 6.3 1SUR-A nrPDB 29 6.3 CONVERGED! >6O9L-1 nrPDB Length = 548 Score = 1065 bits (2754), Expect = 0.0, Method: Composition-based stats. Identities = 548/548 (100%), Positives = 548/548 (100%) Query: 1 MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK 60 MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK Sbjct: 1 MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK 60 Query: 61 AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE 120 AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE Sbjct: 61 AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE 120 Query: 121 DPVLFQLYKDLVVSQVISAEEFWANRLNVNATDSSSTSNHKQDVGISAAFLADVRPQTDG 180 DPVLFQLYKDLVVSQVISAEEFWANRLNVNATDSSSTSNHKQDVGISAAFLADVRPQTDG Sbjct: 121 DPVLFQLYKDLVVSQVISAEEFWANRLNVNATDSSSTSNHKQDVGISAAFLADVRPQTDG 180 Query: 181 CNGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYFHRDRLNTGSK 240 CNGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYFHRDRLNTGSK Sbjct: 181 CNGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYFHRDRLNTGSK 240 Query: 241 DLFAECAKIDEKGLKTMVSLGVKNPLLDLTALEDKPLDEGYGISSVPSASNSKSIKENSN 300 DLFAECAKIDEKGLKTMVSLGVKNPLLDLTALEDKPLDEGYGISSVPSASNSKSIKENSN Sbjct: 241 DLFAECAKIDEKGLKTMVSLGVKNPLLDLTALEDKPLDEGYGISSVPSASNSKSIKENSN 300 Query: 301 AAIIKRFNHHSAMVLAAGLRKQEAQNEQTSEPSNMDGNSGDADCFQPAVKRAKLQESIEY 360 AAIIKRFNHHSAMVLAAGLRKQEAQNEQTSEPSNMDGNSGDADCFQPAVKRAKLQESIEY Sbjct: 301 AAIIKRFNHHSAMVLAAGLRKQEAQNEQTSEPSNMDGNSGDADCFQPAVKRAKLQESIEY 360 Query: 361 EDLGKNNSVKTIALNLKKSDRYYHGPTPIQSLQYATSQDIINSFQSIRQEMEAYTPKLTQ 420 EDLGKNNSVKTIALNLKKSDRYYHGPTPIQSLQYATSQDIINSFQSIRQEMEAYTPKLTQ Sbjct: 361 EDLGKNNSVKTIALNLKKSDRYYHGPTPIQSLQYATSQDIINSFQSIRQEMEAYTPKLTQ 420 Query: 421 VLSSSAASSTITALSPGGALMQGGTQQAINQMVPNDIQSELKHLYVAVGELLRHFWSCFP 480 VLSSSAASSTITALSPGGALMQGGTQQAINQMVPNDIQSELKHLYVAVGELLRHFWSCFP Sbjct: 421 VLSSSAASSTITALSPGGALMQGGTQQAINQMVPNDIQSELKHLYVAVGELLRHFWSCFP 480 Query: 481 VNTPFLEEKVVKMKSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKLHTWQ 540 VNTPFLEEKVVKMKSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKLHTWQ Sbjct: 481 VNTPFLEEKVVKMKSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKLHTWQ 540 Query: 541 SRRLMKKT 548 SRRLMKKT Sbjct: 541 SRRLMKKT 548 >6NMI-C nrPDB Length = 548 Score = 680 bits (1754), Expect = 0.0, Method: Composition-based stats. Identities = 378/539 (70%), Positives = 378/539 (70%) Query: 1 MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK 60 MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK Sbjct: 1 MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK 60 Query: 61 AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE 120 AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE Sbjct: 61 AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE 120 Query: 121 DPVLFQLYKDLVVSQVISAEEFWANRLNVNATDSSSTSNHKQDVGISAAFLADVRPQTDG 180 DPVLFQLYKDLVVSQVISAEEFWANRL VRPQTDG Sbjct: 121 DPVLFQLYKDLVVSQVISAEEFWANRLXXXXXXXXXXXXXXXXXXXXXXXXXXVRPQTDG 180 Query: 181 CNGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYFHRDRLNTGSK 240 CN SDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYFHR Sbjct: 181 CNXXXXXXXSDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYFHRXXXXXXXX 240 Query: 241 DLFAECAKIDEKGLKTMVSLGVKNPLLDLTALEDKPLDEGYGISSVPSASNSKSIKENSN 300 ENSN Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENSN 300 Query: 301 AAIIKRFNHHSAMVLAAGLRKQEAQNEQTSEPSNMDGNSGDADCFQPAVKRAKLQESIEY 360 AAIIKRFNHHSAMVLAAGLRKQEAQNEQTSEPSNMDGNSGDADCFQPAVKRAKLQESIEY Sbjct: 301 AAIIKRFNHHSAMVLAAGLRKQEAQNEQTSEPSNMDGNSGDADCFQPAVKRAKLQESIEY 360 Query: 361 EDLGKNNSVKTIALNLKKSDRYYHGPTPIQSLQYATSQDIINSFQSIRQEMEAYTPKLTQ 420 EDLG IALNLKKSDRYYHGPTPI TSQDIINSFQSIRQEMEAYTPKLTQ Sbjct: 361 EDLGXXXXXXXIALNLKKSDRYYHGPTPIXXXXXXTSQDIINSFQSIRQEMEAYTPKLTQ 420 Query: 421 VLSSSAASSTITALSPGGALMQGGTQQAINQMVPNDIQSELKHLYVAVGELLRHFWSCFP 480 VLSSSAASSTITALSPGGALMQ VPNDIQSELKHLYVAVGELLRHFWSCF Sbjct: 421 VLSSSAASSTITALSPGGALMQXXXXXXXXXXVPNDIQSELKHLYVAVGELLRHFWSCFX 480 Query: 481 VNTPFLEEKVVKMKSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKLHTW 539 LVSHIEEMLQTAYNKLHTW Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVSHIEEMLQTAYNKLHTW 539 >5XV8-B nrPDB Length = 110 Score = 213 bits (541), Expect = 2e-55, Method: Composition-based stats. Identities = 108/108 (100%), Positives = 108/108 (100%) Query: 1 MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK 60 MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK Sbjct: 3 MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK 62 Query: 61 AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKAN 108 AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKAN Sbjct: 63 AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKAN 110 >5OQM-1 nrPDB Length = 510 Score = 172 bits (437), Expect = 3e-43, Method: Composition-based stats. Identities = 41/169 (24%), Positives = 69/169 (40%), Gaps = 21/169 (12%) Query: 77 FHFSNESTAVKERDAVKDLLQQLLPKFKR-------------KANKELEEKNRMLQEDPV 123 F F+N + D +K LQQ++ ++K L+ + +L+ + V Sbjct: 89 FSFNNRTVM----DNIKMTLQQIISRYKDADIYEEKRXXXXXXXXTNLKLQQSLLKGNKV 144 Query: 124 LFQLYKDLVVSQVISAEEFWANRLNVNATDSSSTSNHKQDVGISAAFLADVRPQTDGCNG 183 L +++++ V++ + EFW+ R+ + Sbjct: 145 LMKVFQETVINAGLPPSEFWSTRIPLLRXXXXXXXXXXX----XXXXXXXXXXXXXXXXX 200 Query: 184 LRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYFHR 232 NL+ + I +IF YP VK Y +NVP N E EFW RFF S F + Sbjct: 201 XXXNLSREKILNIFENYPIVKKAYTDNVPKNFKEPEFWARFFSSKLFRK 249 >5OQJ-1 nrPDB Length = 641 Score = 152 bits (383), Expect = 5e-37, Method: Composition-based stats. Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 4/129 (3%) Query: 104 KRKANKELEEKNRMLQEDPVLFQLYKDLVVSQVISAEEFWANRLNVNATDSSSTSNHKQD 163 K K L+ + +L+ + VL +++++ V++ + EFW+ R+ + Sbjct: 171 KEKLLTNLKLQQSLLKGNKVLMKVFQETVINAGLPPSEFWSTRIPLLRXXXXXXXXXXX- 229 Query: 164 VGISAAFLADVRPQTDGCNGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTR 223 NL+ + I +IF YP VK Y +NVP N E EFW R Sbjct: 230 ---XXXXXXXXXXXXXXXXXXXXNLSREKILNIFENYPIVKKAYTDNVPKNFKEPEFWAR 286 Query: 224 FFQSHYFHR 232 FF S F + Sbjct: 287 FFSSKLFRK 295 Score = 40.1 bits (92), Expect = 0.002, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 16/28 (57%), Gaps = 4/28 (14%) Query: 77 FHFSNESTAVKERDAVKDLLQQLLPKFK 104 F F+N + D +K LQQ++ ++K Sbjct: 89 FSFNNRTVM----DNIKMTLQQIISRYK 112 >2DII-A nrPDB Length = 61 Score = 87.5 bits (215), Expect = 2e-17, Method: Composition-based stats. Identities = 50/56 (89%), Positives = 51/56 (91%) Query: 101 PKFKRKANKELEEKNRMLQEDPVLFQLYKDLVVSQVISAEEFWANRLNVNATDSSS 156 FKRKANKELEEKNRMLQEDPVLFQLYKDLVVSQVISAEEFWANRLNVN+ SS Sbjct: 6 SGFKRKANKELEEKNRMLQEDPVLFQLYKDLVVSQVISAEEFWANRLNVNSGPSSG 61 >2M14-A nrPDB Length = 119 Score = 40.5 bits (93), Expect = 0.002, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 16/28 (57%), Gaps = 4/28 (14%) Query: 77 FHFSNESTAVKERDAVKDLLQQLLPKFK 104 F F+N + D +K LQQ++ ++K Sbjct: 89 FSFNNRTVM----DNIKMTLQQIISRYK 112 >1MJG-A nrPDB Length = 674 Score = 32.8 bits (73), Expect = 0.37, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 4/89 (4%) Query: 255 KTMVSLGVKNPLLDLTALEDKPLD-EGYGISSVPSASNSKSIKENSNAAIIKRFNHHSAM 313 K + + +NP+ L LD E G++ + +N K ++NS+ ++K ++ Sbjct: 438 KLLATQNAQNPI---RVLNQAILDGELAGVALICGCNNLKGFQDNSHLTVMKELLKNNVF 494 Query: 314 VLAAGLRKQEAQNEQTSEPSNMDGNSGDA 342 V+A G Q A +P+N++ GD Sbjct: 495 VVATGCSAQAAGKLGLLDPANVETYCGDG 523 >2KT0-A nrPDB Length = 84 Score = 31.6 bits (70), Expect = 0.84, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%) Query: 487 EEKV-VKMKSNLERFQVTKLCPFQEKIRRQ-YLSTNLVSHIEEMLQTAYNKLHTWQSRRL 544 E+KV VK + F T+LC ++ +RQ YLS + + +L +Y ++ TW + Sbjct: 15 EDKVPVKKQKTRTVFSSTQLCVLNDRFQRQKYLSLQQMQELSNILNLSYKQVKTWFQNQR 74 Query: 545 MK 546 MK Sbjct: 75 MK 76 >4RBO-A nrPDB Length = 70 Score = 30.9 bits (68), Expect = 1.5, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 2/50 (4%) Query: 500 FQVTKLCPFQEKIRRQ-YLSTNLVSHIEEMLQTAYNKLHTW-QSRRLMKK 547 F T+LC ++ +RQ YLS + + +L +Y ++ TW Q++R+ K Sbjct: 10 FSSTQLCVLNDRFQRQKYLSLQQMQELSNILNLSYKQVKTWFQNQRMKSK 59 >5GUP-l nrPDB Length = 606 Score = 29.7 bits (65), Expect = 3.3, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 9/87 (10%) Query: 385 GPTPIQSLQYATSQDIINSFQSIRQEMEAYTPKLTQVLS--SSAASSTITALSPGGALMQ 442 GPTP+ +L ++++ + F IR T KL Q ++ A ++ TAL Sbjct: 239 GPTPVSALLHSSTMVVAGVFLLIRFYPLMETNKLVQTMTLCLGAITTLFTALC------- 291 Query: 443 GGTQQAINQMVPNDIQSELKHLYVAVG 469 TQ I ++V S+L + V +G Sbjct: 292 AITQNDIKKIVAFSTSSQLGLMMVTIG 318 >4I6J-B nrPDB Length = 428 Score = 29.3 bits (64), Expect = 4.5, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 4/42 (9%) Query: 187 NLTSDIIESIFRTYPAVKMKYAENVPHNMTE----KEFWTRF 224 NL DII +F+ P + +A V N + + W F Sbjct: 38 NLLQDIILQVFKYLPLLDRAHASQVCRNWNQVFHMPDLWRCF 79 >2VI6-A nrPDB Length = 62 Score = 29.3 bits (64), Expect = 4.5, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 500 FQVTKLCPFQEKIRRQ-YLSTNLVSHIEEMLQTAYNKLHTWQSRRLMK 546 F +LC +++ ++Q YLS + + +L +Y ++ TW + MK Sbjct: 10 FSQAQLCALKDRFQKQKYLSLQQMQELSSILNLSYKQVKTWFQNQRMK 57 >4GYK-A nrPDB Length = 648 Score = 29.3 bits (64), Expect = 4.8, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 11/128 (8%) Query: 253 GLKTMVSL---GVKNPLLDLTALEDKPLDEGYGISSVPSASNSKSIKENSNAAIIKRFNH 309 GL TM L + + L D +D YG+ V + + ++E K + Sbjct: 208 GLYTMKGLQRQDIASALKHFPGHGDTDVDSHYGLPLV--SHGQERLREVELYPFQKAIDA 265 Query: 310 HSAMVLAAGLRKQEAQNEQTSEPSNMDGNSGDADCFQPAVKRAKLQESIEYEDLGKNNSV 369 + MV+ A + Q + T+ S +DG +D PA K+ + +++G N + Sbjct: 266 GADMVMTAHV--QFPAFDDTTYKSKLDG----SDILVPATLSKKVMTGLLRQEMGFNGVI 319 Query: 370 KTIALNLK 377 T ALN+K Sbjct: 320 VTNALNMK 327 >5OF3-B nrPDB Length = 307 Score = 28.9 bits (63), Expect = 5.8, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Query: 229 YFHRDRLNTGSKDLFAECAKIDEKGLKTMVSLGVKNPL 266 + + R + G++ + CAK+ + GL + S VKNPL Sbjct: 263 LYRKYRGDKGTRYIVYSCAKMKQLGL-CVSSCNVKNPL 299 >2O8V-A nrPDB Length = 252 Score = 28.9 bits (63), Expect = 6.3, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 49/109 (44%), Gaps = 21/109 (19%) Query: 416 PKLTQVLSSSAASSTITALS------------PGGALMQG--GTQQAINQMVPNDIQSEL 461 PK+ ++L+ + ++ + L PG ++ G Q A++ + N I+ ++ Sbjct: 13 PKVDRILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIRPDI 72 Query: 462 KHLYVAVGELLRHFWSCFPVNTPFLEEKVVKMKSNLERFQVTKLCPFQE 510 + G L FP F++E K+K NL+ ++ T+ +QE Sbjct: 73 PVILTDTGYL-------FPETYRFIDELTDKLKLNLKVYRATESAAWQE 114 >1SUR-A nrPDB Length = 215 Score = 28.9 bits (63), Expect = 6.3, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 49/109 (44%), Gaps = 21/109 (19%) Query: 416 PKLTQVLSSSAASSTITALS------------PGGALMQG--GTQQAINQMVPNDIQSEL 461 PK+ ++L+ + ++ + L PG ++ G Q A++ + N I+ ++ Sbjct: 12 PKVDRILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIRPDI 71 Query: 462 KHLYVAVGELLRHFWSCFPVNTPFLEEKVVKMKSNLERFQVTKLCPFQE 510 + G L FP F++E K+K NL+ ++ T+ +QE Sbjct: 72 PVILTDTGYL-------FPETYRFIDELTDKLKLNLKVYRATESAAWQE 113 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.320 0.129 0.365 Lambda K H 0.267 0.0409 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 22,177,464 Number of Sequences: 36641 Number of extensions: 926557 Number of successful extensions: 2513 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 20 Number of HSP's successfully gapped in prelim test: 23 Number of HSP's that attempted gapping in prelim test: 2474 Number of HSP's gapped (non-prelim): 56 length of query: 548 length of database: 10,336,785 effective HSP length: 102 effective length of query: 446 effective length of database: 6,599,403 effective search space: 2943333738 effective search space used: 2943333738 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 62 (28.5 bits)