BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P32773 (286 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5OQM-U nrPDB 569 e-163 6GYM-U nrPDB 191 4e-49 1YTF-C nrPDB 163 7e-41 5FMF-M nrPDB 123 1e-28 5IY9-N nrPDB 64 7e-11 1NVP-C nrPDB 62 2e-10 5M4S-A nrPDB 59 3e-09 6MZM-W nrPDB 57 1e-08 2MVZ-A nrPDB 28 6.4 6CZY-A nrPDB 27 9.1 >5OQM-U nrPDB Length = 286 Score = 569 bits (1467), Expect = e-163, Method: Compositional matrix adjust. Identities = 286/286 (100%), Positives = 286/286 (100%) Query: 1 MSNAEASRVYEIIVESVVNEVREDFENAGIDEQTLQDLKNIWQKKLTETKVTTFSWDNQF 60 MSNAEASRVYEIIVESVVNEVREDFENAGIDEQTLQDLKNIWQKKLTETKVTTFSWDNQF Sbjct: 1 MSNAEASRVYEIIVESVVNEVREDFENAGIDEQTLQDLKNIWQKKLTETKVTTFSWDNQF 60 Query: 61 NEGNINGVQNDLNFNLATPGVNSSEFNIKEENTGNEGLILPNINSNNNIPHSGETNINTN 120 NEGNINGVQNDLNFNLATPGVNSSEFNIKEENTGNEGLILPNINSNNNIPHSGETNINTN Sbjct: 61 NEGNINGVQNDLNFNLATPGVNSSEFNIKEENTGNEGLILPNINSNNNIPHSGETNINTN 120 Query: 121 TVEATNNSGATLNTNTSGNTNADVTSQPKIEVKPEIELTINNANITTVENIDDESEKKDD 180 TVEATNNSGATLNTNTSGNTNADVTSQPKIEVKPEIELTINNANITTVENIDDESEKKDD Sbjct: 121 TVEATNNSGATLNTNTSGNTNADVTSQPKIEVKPEIELTINNANITTVENIDDESEKKDD 180 Query: 181 EEKEEDVEKTRKEKEQIEQVKLQAKKEKRSALLDTDEVGSELDDSDDDYLISEGEEDGPD 240 EEKEEDVEKTRKEKEQIEQVKLQAKKEKRSALLDTDEVGSELDDSDDDYLISEGEEDGPD Sbjct: 181 EEKEEDVEKTRKEKEQIEQVKLQAKKEKRSALLDTDEVGSELDDSDDDYLISEGEEDGPD 240 Query: 241 ENLMLCLYDKVTRTKARWKCSLKDGVVTINRNDYTFQKAQVEAEWV 286 ENLMLCLYDKVTRTKARWKCSLKDGVVTINRNDYTFQKAQVEAEWV Sbjct: 241 ENLMLCLYDKVTRTKARWKCSLKDGVVTINRNDYTFQKAQVEAEWV 286 >6GYM-U nrPDB Length = 171 Score = 191 bits (484), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 95/98 (96%), Positives = 96/98 (97%) Query: 1 MSNAEASRVYEIIVESVVNEVREDFENAGIDEQTLQDLKNIWQKKLTETKVTTFSWDNQF 60 MSNAEASRVYEIIVESVVNEVREDFENAGIDEQTLQDLKNIWQKKLTETKVTTFSWDNQF Sbjct: 1 MSNAEASRVYEIIVESVVNEVREDFENAGIDEQTLQDLKNIWQKKLTETKVTTFSWDNQF 60 Query: 61 NEGNINGVQNDLNFNLATPGVNSSEFNIKEENTGNEGL 98 NEGNINGVQNDLNFNLATPGVNSSEFNIKEENTG+ L Sbjct: 61 NEGNINGVQNDLNFNLATPGVNSSEFNIKEENTGSALL 98 Score = 165 bits (417), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 77/77 (100%), Positives = 77/77 (100%) Query: 210 SALLDTDEVGSELDDSDDDYLISEGEEDGPDENLMLCLYDKVTRTKARWKCSLKDGVVTI 269 SALLDTDEVGSELDDSDDDYLISEGEEDGPDENLMLCLYDKVTRTKARWKCSLKDGVVTI Sbjct: 95 SALLDTDEVGSELDDSDDDYLISEGEEDGPDENLMLCLYDKVTRTKARWKCSLKDGVVTI 154 Query: 270 NRNDYTFQKAQVEAEWV 286 NRNDYTFQKAQVEAEWV Sbjct: 155 NRNDYTFQKAQVEAEWV 171 >1YTF-C nrPDB Length = 79 Score = 163 bits (413), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 77/77 (100%), Positives = 77/77 (100%) Query: 210 SALLDTDEVGSELDDSDDDYLISEGEEDGPDENLMLCLYDKVTRTKARWKCSLKDGVVTI 269 SALLDTDEVGSELDDSDDDYLISEGEEDGPDENLMLCLYDKVTRTKARWKCSLKDGVVTI Sbjct: 3 SALLDTDEVGSELDDSDDDYLISEGEEDGPDENLMLCLYDKVTRTKARWKCSLKDGVVTI 62 Query: 270 NRNDYTFQKAQVEAEWV 286 NRNDYTFQKAQVEAEWV Sbjct: 63 NRNDYTFQKAQVEAEWV 79 >5FMF-M nrPDB Length = 116 Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 61/65 (93%), Positives = 63/65 (96%) Query: 2 SNAEASRVYEIIVESVVNEVREDFENAGIDEQTLQDLKNIWQKKLTETKVTTFSWDNQFN 61 SNAEASRVYEIIVESVVNEVREDFENAGIDEQTLQDLKNIWQKKLTETKVTTFSWDNQFN Sbjct: 1 SNAEASRVYEIIVESVVNEVREDFENAGIDEQTLQDLKNIWQKKLTETKVTTFSWDNQFN 60 Query: 62 EGNIN 66 + I+ Sbjct: 61 DYLIS 65 Score = 121 bits (303), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 57/64 (89%), Positives = 59/64 (92%), Gaps = 3/64 (4%) Query: 223 DDSDDDYLISEGEEDGPDENLMLCLYDKVTRTKARWKCSLKDGVVTINRNDYTFQKAQVE 282 D+ +DYLISE DGPDENLMLCLYDKVTRTKARWKCSLKDGVVTINRNDYTFQKAQVE Sbjct: 56 DNQFNDYLISE---DGPDENLMLCLYDKVTRTKARWKCSLKDGVVTINRNDYTFQKAQVE 112 Query: 283 AEWV 286 AEWV Sbjct: 113 AEWV 116 >5IY9-N nrPDB Length = 376 Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 29/61 (47%), Positives = 41/61 (67%) Query: 225 SDDDYLISEGEEDGPDENLMLCLYDKVTRTKARWKCSLKDGVVTINRNDYTFQKAQVEAE 284 S+DD EG+E EN+++C YDK+ R+K +WK LKDG++ +N DY F KA +AE Sbjct: 316 SEDDVSDEEGQELFDTENVVVCQYDKIHRSKNKWKFHLKDGIMNLNGRDYIFSKAIGDAE 375 Query: 285 W 285 W Sbjct: 376 W 376 Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 17/44 (38%), Positives = 32/44 (72%) Query: 7 SRVYEIIVESVVNEVREDFENAGIDEQTLQDLKNIWQKKLTETK 50 ++Y ++E V+N+VR+ F + G+DEQ L +LK +W+ KL +++ Sbjct: 11 PKLYRSVIEDVINDVRDIFLDDGVDEQVLMELKTLWENKLMQSR 54 >1NVP-C nrPDB Length = 76 Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 29/61 (47%), Positives = 41/61 (67%) Query: 225 SDDDYLISEGEEDGPDENLMLCLYDKVTRTKARWKCSLKDGVVTINRNDYTFQKAQVEAE 284 S+DD EG+E EN+++C YDK+ R+K +WK LKDG++ +N DY F KA +AE Sbjct: 16 SEDDVSDEEGQELFDTENVVVCQYDKIHRSKNKWKFHLKDGIMNLNGRDYIFSKAIGDAE 75 Query: 285 W 285 W Sbjct: 76 W 76 >5M4S-A nrPDB Length = 209 Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 15/88 (17%) Query: 198 EQVKLQAKKEKRSALLDTDEVGSELDDSDDDYLISEGEEDGPDENLMLCLYDKVTRTKAR 257 EQV ++ K + L+ + V EL D+ EN+++C YDK+ R+K + Sbjct: 137 EQVLMELKTLWENKLMQSRAVDGELFDT---------------ENVVVCQYDKIHRSKNK 181 Query: 258 WKCSLKDGVVTINRNDYTFQKAQVEAEW 285 WK LKDG++ +N DY F KA +AEW Sbjct: 182 WKFHLKDGIMNLNGRDYIFSKAIGDAEW 209 Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 32/43 (74%) Query: 8 RVYEIIVESVVNEVREDFENAGIDEQTLQDLKNIWQKKLTETK 50 ++Y ++E V+N+VR+ F + G+DEQ L +LK +W+ KL +++ Sbjct: 113 KLYRSVIEDVINDVRDIFLDDGVDEQVLMELKTLWENKLMQSR 155 >6MZM-W nrPDB Length = 90 Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 23/45 (51%), Positives = 33/45 (73%) Query: 241 ENLMLCLYDKVTRTKARWKCSLKDGVVTINRNDYTFQKAQVEAEW 285 EN+++C YDK+ R+K +WK LKDG++ +N DY F KA +AEW Sbjct: 46 ENVVVCQYDKIHRSKNKWKFHLKDGIMNLNGRDYIFSKAIGDAEW 90 Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 18/44 (40%), Positives = 31/44 (70%) Query: 6 ASRVYEIIVESVVNEVREDFENAGIDEQTLQDLKNIWQKKLTET 49 ++Y ++E V+N+VR+ F + G+DEQ L +LK +W+ KL +T Sbjct: 2 VPKLYRSVIEDVINDVRDIFLDDGVDEQVLMELKTLWENKLMDT 45 >2MVZ-A nrPDB Length = 148 Score = 27.7 bits (60), Expect = 6.4, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 6/64 (9%) Query: 48 ETKVTTFSWDNQFNEGNINGVQNDLNFNLATPGVNSSEFNIKEENTGNEGLILPNINSNN 107 E VT +++ NEG NG L F+ PG S + TG+ G +P NN Sbjct: 25 EAPVTVANFEKLANEGFYNG----LTFHRVIPGFVSQGGCPRGNGTGDAGYTIPCETDNN 80 Query: 108 NIPH 111 PH Sbjct: 81 --PH 82 >6CZY-A nrPDB Length = 362 Score = 26.9 bits (58), Expect = 9.1, Method: Compositional matrix adjust. Identities = 9/40 (22%), Positives = 25/40 (62%) Query: 247 LYDKVTRTKARWKCSLKDGVVTINRNDYTFQKAQVEAEWV 286 LY+ + + ++C ++ V ++ +T +K+++EAE++ Sbjct: 275 LYNAIEESNGFFRCPVEKSVRSLMNVPFTLEKSELEAEFI 314 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5OQM-U nrPDB 417 e-117 6GYM-U nrPDB 160 7e-40 1YTF-C nrPDB 125 2e-29 5M4S-A nrPDB 124 3e-29 5IY9-N nrPDB 116 9e-27 5FMF-M nrPDB 109 2e-24 6MZM-W nrPDB 105 2e-23 1NVP-C nrPDB 104 5e-23 Sequences not found previously or not previously below threshold: 5OQL-X nrPDB 32 0.40 2IZO-A nrPDB 30 1.2 2MVZ-A nrPDB 30 1.4 5G5P-A nrPDB 29 3.3 2X5F-A nrPDB 28 3.9 5LCL-B nrPDB 28 4.4 3JW6-A nrPDB 28 5.5 5YJJ-A nrPDB 27 7.2 CONVERGED! >5OQM-U nrPDB Length = 286 Score = 417 bits (1071), Expect = e-117, Method: Composition-based stats. Identities = 286/286 (100%), Positives = 286/286 (100%) Query: 1 MSNAEASRVYEIIVESVVNEVREDFENAGIDEQTLQDLKNIWQKKLTETKVTTFSWDNQF 60 MSNAEASRVYEIIVESVVNEVREDFENAGIDEQTLQDLKNIWQKKLTETKVTTFSWDNQF Sbjct: 1 MSNAEASRVYEIIVESVVNEVREDFENAGIDEQTLQDLKNIWQKKLTETKVTTFSWDNQF 60 Query: 61 NEGNINGVQNDLNFNLATPGVNSSEFNIKEENTGNEGLILPNINSNNNIPHSGETNINTN 120 NEGNINGVQNDLNFNLATPGVNSSEFNIKEENTGNEGLILPNINSNNNIPHSGETNINTN Sbjct: 61 NEGNINGVQNDLNFNLATPGVNSSEFNIKEENTGNEGLILPNINSNNNIPHSGETNINTN 120 Query: 121 TVEATNNSGATLNTNTSGNTNADVTSQPKIEVKPEIELTINNANITTVENIDDESEKKDD 180 TVEATNNSGATLNTNTSGNTNADVTSQPKIEVKPEIELTINNANITTVENIDDESEKKDD Sbjct: 121 TVEATNNSGATLNTNTSGNTNADVTSQPKIEVKPEIELTINNANITTVENIDDESEKKDD 180 Query: 181 EEKEEDVEKTRKEKEQIEQVKLQAKKEKRSALLDTDEVGSELDDSDDDYLISEGEEDGPD 240 EEKEEDVEKTRKEKEQIEQVKLQAKKEKRSALLDTDEVGSELDDSDDDYLISEGEEDGPD Sbjct: 181 EEKEEDVEKTRKEKEQIEQVKLQAKKEKRSALLDTDEVGSELDDSDDDYLISEGEEDGPD 240 Query: 241 ENLMLCLYDKVTRTKARWKCSLKDGVVTINRNDYTFQKAQVEAEWV 286 ENLMLCLYDKVTRTKARWKCSLKDGVVTINRNDYTFQKAQVEAEWV Sbjct: 241 ENLMLCLYDKVTRTKARWKCSLKDGVVTINRNDYTFQKAQVEAEWV 286 >6GYM-U nrPDB Length = 171 Score = 160 bits (404), Expect = 7e-40, Method: Composition-based stats. Identities = 95/98 (96%), Positives = 96/98 (97%) Query: 1 MSNAEASRVYEIIVESVVNEVREDFENAGIDEQTLQDLKNIWQKKLTETKVTTFSWDNQF 60 MSNAEASRVYEIIVESVVNEVREDFENAGIDEQTLQDLKNIWQKKLTETKVTTFSWDNQF Sbjct: 1 MSNAEASRVYEIIVESVVNEVREDFENAGIDEQTLQDLKNIWQKKLTETKVTTFSWDNQF 60 Query: 61 NEGNINGVQNDLNFNLATPGVNSSEFNIKEENTGNEGL 98 NEGNINGVQNDLNFNLATPGVNSSEFNIKEENTG+ L Sbjct: 61 NEGNINGVQNDLNFNLATPGVNSSEFNIKEENTGSALL 98 Score = 115 bits (288), Expect = 2e-26, Method: Composition-based stats. Identities = 77/77 (100%), Positives = 77/77 (100%) Query: 210 SALLDTDEVGSELDDSDDDYLISEGEEDGPDENLMLCLYDKVTRTKARWKCSLKDGVVTI 269 SALLDTDEVGSELDDSDDDYLISEGEEDGPDENLMLCLYDKVTRTKARWKCSLKDGVVTI Sbjct: 95 SALLDTDEVGSELDDSDDDYLISEGEEDGPDENLMLCLYDKVTRTKARWKCSLKDGVVTI 154 Query: 270 NRNDYTFQKAQVEAEWV 286 NRNDYTFQKAQVEAEWV Sbjct: 155 NRNDYTFQKAQVEAEWV 171 >1YTF-C nrPDB Length = 79 Score = 125 bits (314), Expect = 2e-29, Method: Composition-based stats. Identities = 77/77 (100%), Positives = 77/77 (100%) Query: 210 SALLDTDEVGSELDDSDDDYLISEGEEDGPDENLMLCLYDKVTRTKARWKCSLKDGVVTI 269 SALLDTDEVGSELDDSDDDYLISEGEEDGPDENLMLCLYDKVTRTKARWKCSLKDGVVTI Sbjct: 3 SALLDTDEVGSELDDSDDDYLISEGEEDGPDENLMLCLYDKVTRTKARWKCSLKDGVVTI 62 Query: 270 NRNDYTFQKAQVEAEWV 286 NRNDYTFQKAQVEAEWV Sbjct: 63 NRNDYTFQKAQVEAEWV 79 >5M4S-A nrPDB Length = 209 Score = 124 bits (312), Expect = 3e-29, Method: Composition-based stats. Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 19/127 (14%) Query: 159 TINNANITTVENIDDESEKKDDEEKEEDVEKTRKEKEQIEQVKLQAKKEKRSALLDTDEV 218 T N+AN TV + + E+ DV + EQV ++ K + L+ + V Sbjct: 102 TANSANTNTVPKL----YRSVIEDVINDVRDIFLDDGVDEQVLMELKTLWENKLMQSRAV 157 Query: 219 GSELDDSDDDYLISEGEEDGPDENLMLCLYDKVTRTKARWKCSLKDGVVTINRNDYTFQK 278 EL D+ EN+++C YDK+ R+K +WK LKDG++ +N DY F K Sbjct: 158 DGELFDT---------------ENVVVCQYDKIHRSKNKWKFHLKDGIMNLNGRDYIFSK 202 Query: 279 AQVEAEW 285 A +AEW Sbjct: 203 AIGDAEW 209 Score = 77.5 bits (189), Expect = 6e-15, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 32/45 (71%) Query: 6 ASRVYEIIVESVVNEVREDFENAGIDEQTLQDLKNIWQKKLTETK 50 ++Y ++E V+N+VR+ F + G+DEQ L +LK +W+ KL +++ Sbjct: 111 VPKLYRSVIEDVINDVRDIFLDDGVDEQVLMELKTLWENKLMQSR 155 >5IY9-N nrPDB Length = 376 Score = 116 bits (291), Expect = 9e-27, Method: Composition-based stats. Identities = 31/69 (44%), Positives = 45/69 (65%) Query: 217 EVGSELDDSDDDYLISEGEEDGPDENLMLCLYDKVTRTKARWKCSLKDGVVTINRNDYTF 276 +V E +S+DD EG+E EN+++C YDK+ R+K +WK LKDG++ +N DY F Sbjct: 308 QVEEEPLNSEDDVSDEEGQELFDTENVVVCQYDKIHRSKNKWKFHLKDGIMNLNGRDYIF 367 Query: 277 QKAQVEAEW 285 KA +AEW Sbjct: 368 SKAIGDAEW 376 Score = 81.0 bits (198), Expect = 5e-16, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 32/45 (71%) Query: 6 ASRVYEIIVESVVNEVREDFENAGIDEQTLQDLKNIWQKKLTETK 50 ++Y ++E V+N+VR+ F + G+DEQ L +LK +W+ KL +++ Sbjct: 10 VPKLYRSVIEDVINDVRDIFLDDGVDEQVLMELKTLWENKLMQSR 54 Score = 41.7 bits (96), Expect = 4e-04, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 4/60 (6%) Query: 161 NNANITTVENIDDESEKKDDEEKEEDVEKTRKEKEQIEQVKLQAKKEKRSALLDTDEVGS 220 N+AN TV + + E+ DV + EQV ++ K + L+ + V Sbjct: 3 NSANTNTVPKL----YRSVIEDVINDVRDIFLDDGVDEQVLMELKTLWENKLMQSRAVDG 58 >5FMF-M nrPDB Length = 116 Score = 109 bits (272), Expect = 2e-24, Method: Composition-based stats. Identities = 64/75 (85%), Positives = 66/75 (88%) Query: 2 SNAEASRVYEIIVESVVNEVREDFENAGIDEQTLQDLKNIWQKKLTETKVTTFSWDNQFN 61 SNAEASRVYEIIVESVVNEVREDFENAGIDEQTLQDLKNIWQKKLTETKVTTFSWDNQFN Sbjct: 1 SNAEASRVYEIIVESVVNEVREDFENAGIDEQTLQDLKNIWQKKLTETKVTTFSWDNQFN 60 Query: 62 EGNINGVQNDLNFNL 76 + I+ D N L Sbjct: 61 DYLISEDGPDENLML 75 Score = 107 bits (266), Expect = 8e-24, Method: Composition-based stats. Identities = 62/89 (69%), Positives = 66/89 (74%), Gaps = 3/89 (3%) Query: 198 EQVKLQAKKEKRSALLDTDEVGSELDDSDDDYLISEGEEDGPDENLMLCLYDKVTRTKAR 257 EQ K + L +T D+ +DYLISE DGPDENLMLCLYDKVTRTKAR Sbjct: 31 EQTLQDLKNIWQKKLTETKVTTFSWDNQFNDYLISE---DGPDENLMLCLYDKVTRTKAR 87 Query: 258 WKCSLKDGVVTINRNDYTFQKAQVEAEWV 286 WKCSLKDGVVTINRNDYTFQKAQVEAEWV Sbjct: 88 WKCSLKDGVVTINRNDYTFQKAQVEAEWV 116 >6MZM-W nrPDB Length = 90 Score = 105 bits (262), Expect = 2e-23, Method: Composition-based stats. Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 25/88 (28%) Query: 198 EQVKLQAKKEKRSALLDTDEVGSELDDSDDDYLISEGEEDGPDENLMLCLYDKVTRTKAR 257 EQV ++ K + L+DT EN+++C YDK+ R+K + Sbjct: 28 EQVLMELKTLWENKLMDT-------------------------ENVVVCQYDKIHRSKNK 62 Query: 258 WKCSLKDGVVTINRNDYTFQKAQVEAEW 285 WK LKDG++ +N DY F KA +AEW Sbjct: 63 WKFHLKDGIMNLNGRDYIFSKAIGDAEW 90 Score = 77.1 bits (188), Expect = 8e-15, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 32/45 (71%) Query: 6 ASRVYEIIVESVVNEVREDFENAGIDEQTLQDLKNIWQKKLTETK 50 ++Y ++E V+N+VR+ F + G+DEQ L +LK +W+ KL +T+ Sbjct: 2 VPKLYRSVIEDVINDVRDIFLDDGVDEQVLMELKTLWENKLMDTE 46 >1NVP-C nrPDB Length = 76 Score = 104 bits (259), Expect = 5e-23, Method: Composition-based stats. Identities = 31/69 (44%), Positives = 45/69 (65%) Query: 217 EVGSELDDSDDDYLISEGEEDGPDENLMLCLYDKVTRTKARWKCSLKDGVVTINRNDYTF 276 +V E +S+DD EG+E EN+++C YDK+ R+K +WK LKDG++ +N DY F Sbjct: 8 QVEEEPLNSEDDVSDEEGQELFDTENVVVCQYDKIHRSKNKWKFHLKDGIMNLNGRDYIF 67 Query: 277 QKAQVEAEW 285 KA +AEW Sbjct: 68 SKAIGDAEW 76 >5OQL-X nrPDB Length = 630 Score = 31.7 bits (70), Expect = 0.40, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 18/93 (19%) Query: 173 DESEKKDDEEKEEDV-------EKTRKEKEQIEQVKLQAKKEKRSALLDTDEVGSELDDS 225 DESEK+ + E+ + EKTRKE EQ+++ D +E+ +L Sbjct: 87 DESEKEGETAAEKRLRLAQRYLEKTRKEVEQLDEYA-----------FDAEEIDRDLLAE 135 Query: 226 DDDYLISEGEEDGPDENLMLCLYDKVTRTKARW 258 ++E + +DK T T+ RW Sbjct: 136 RLKEDVAEAKGKVYRRLASELAFDKATYTQFRW 168 >2IZO-A nrPDB Length = 346 Score = 30.1 bits (66), Expect = 1.2, Method: Composition-based stats. Identities = 13/30 (43%), Positives = 20/30 (66%) Query: 178 KDDEEKEEDVEKTRKEKEQIEQVKLQAKKE 207 K E+K E++E+ RK KE+ E+ +AK E Sbjct: 79 KPPEQKSEELERRRKAKEEAERKLERAKSE 108 >2MVZ-A nrPDB Length = 148 Score = 29.7 bits (65), Expect = 1.4, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 6/64 (9%) Query: 48 ETKVTTFSWDNQFNEGNINGVQNDLNFNLATPGVNSSEFNIKEENTGNEGLILPNINSNN 107 E VT +++ NEG NG L F+ PG S + TG+ G +P NN Sbjct: 25 EAPVTVANFEKLANEGFYNG----LTFHRVIPGFVSQGGCPRGNGTGDAGYTIPCETDNN 80 Query: 108 NIPH 111 PH Sbjct: 81 --PH 82 >5G5P-A nrPDB Length = 805 Score = 28.6 bits (62), Expect = 3.3, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 22/33 (66%) Query: 179 DDEEKEEDVEKTRKEKEQIEQVKLQAKKEKRSA 211 D++ E E +KE+++IE+ K Q KK++ +A Sbjct: 689 DEKLSSEQEEMRKKEEQRIEEEKTQLKKKQENA 721 >2X5F-A nrPDB Length = 430 Score = 28.2 bits (61), Expect = 3.9, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 48/108 (44%), Gaps = 3/108 (2%) Query: 1 MSNAEASRVYEIIVESVVNEVREDFENAGIDEQTLQDLKNIWQKKLTETKVTTFSWDNQF 60 M+ + +++ ++++ N++ D Q +++L+++WQ+K+ S DN Sbjct: 56 MATNKDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDN-PELSIDNMS 114 Query: 61 NEGNINGVQNDLNFNLATPGVNSSE-FNIKEENTGNEGLILPNINSNN 107 N + + L+ + VN + + E N GN L+ N N Sbjct: 115 RPIVTNALTHGLSL-VGDLFVNQDDTILLPEHNWGNYKLVFNTRNGAN 161 >5LCL-B nrPDB Length = 371 Score = 28.2 bits (61), Expect = 4.4, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 42/114 (36%), Gaps = 8/114 (7%) Query: 106 NNNIPHSGETNINTNT--------VEATNNSGATLNTNTSGNTNADVTSQPKIEVKPEIE 157 N+N S N NTNT V+ + + L+ + + Q IE Sbjct: 66 NHNGQPSALANTNTNTTSLYGSGVVDGSKRDASVLDKRPTDRIRPSIRKQDYIEYDFATM 125 Query: 158 LTINNANITTVENIDDESEKKDDEEKEEDVEKTRKEKEQIEQVKLQAKKEKRSA 211 +N I + + + D E + E K +K + ++ +L+ K +A Sbjct: 126 QNLNGGYINPKDKLPNSDFTDDQEFESEFGSKKQKTLQDWKKEQLERKMLYENA 179 >3JW6-A nrPDB Length = 245 Score = 27.8 bits (60), Expect = 5.5, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 23/52 (44%) Query: 204 AKKEKRSALLDTDEVGSELDDSDDDYLISEGEEDGPDENLMLCLYDKVTRTK 255 K KR E+ D D+YL++E GP +N L L+ ++ K Sbjct: 28 IKNAKRKKHFAEHEIEEATLDPLDNYLVAEDPFLGPGKNQKLTLFKEIRNVK 79 >5YJJ-A nrPDB Length = 713 Score = 27.4 bits (59), Expect = 7.2, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 36/70 (51%), Gaps = 4/70 (5%) Query: 5 EASRV--YEIIVESVVNEVREDFENAGIDEQTLQDLKNIWQKKLTETKVTTFSWDNQFNE 62 E R+ ++ + + ++++F DE ++ +K++ + K + V TF D Q + Sbjct: 223 EIKRLVAFQQEIIDHIQPIKQEFVPVERDEDLVEKVKSLTEDKGLKDTVLTF--DKQQRD 280 Query: 63 GNINGVQNDL 72 N++ ++ ++ Sbjct: 281 ENLDALKEEV 290 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.305 0.125 0.338 Lambda K H 0.267 0.0394 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 10,804,790 Number of Sequences: 36641 Number of extensions: 445256 Number of successful extensions: 2259 Number of sequences better than 10.0: 59 Number of HSP's better than 10.0 without gapping: 105 Number of HSP's successfully gapped in prelim test: 126 Number of HSP's that attempted gapping in prelim test: 1530 Number of HSP's gapped (non-prelim): 567 length of query: 286 length of database: 10,336,785 effective HSP length: 96 effective length of query: 190 effective length of database: 6,819,249 effective search space: 1295657310 effective search space used: 1295657310 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 43 (21.9 bits) S2: 58 (27.0 bits)