BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P32755 (393 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1SQI-A nrPDB 823 0.0 5EC3-A nrPDB 752 0.0 1T47-A nrPDB 320 5e-88 1SP9-A nrPDB 184 5e-47 3ZGJ-A nrPDB 179 1e-45 1SP8-A nrPDB 175 3e-44 2R5V-A nrPDB 150 7e-37 1CJX-A nrPDB 109 2e-24 5HMQ-A nrPDB 49 4e-06 1JC5-A nrPDB 41 7e-04 4G6X-A nrPDB 33 0.24 1TKI-A nrPDB 33 0.28 4HC5-A nrPDB 32 0.41 3L7V-A nrPDB 30 1.4 4MTS-A nrPDB 30 1.6 5BRA-A nrPDB 30 1.9 2EH6-A nrPDB 29 4.1 6FDF-A nrPDB 28 5.0 >1SQI-A nrPDB Length = 393 Score = 823 bits (2125), Expect = 0.0, Method: Compositional matrix adjust. Identities = 393/393 (100%), Positives = 393/393 (100%) Query: 1 MTTYSNKGPKPERGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSH 60 MTTYSNKGPKPERGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSH Sbjct: 1 MTTYSNKGPKPERGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSH 60 Query: 61 VIKQGKIVFVLCSALNPWNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVRE 120 VIKQGKIVFVLCSALNPWNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVRE Sbjct: 61 VIKQGKIVFVLCSALNPWNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVRE 120 Query: 121 PWVEEDKFGKVKFAVLQTYGDTTHTLVEKINYTGRFLPGFEAPTYKDTLLPKLPSCNLEI 180 PWVEEDKFGKVKFAVLQTYGDTTHTLVEKINYTGRFLPGFEAPTYKDTLLPKLPSCNLEI Sbjct: 121 PWVEEDKFGKVKFAVLQTYGDTTHTLVEKINYTGRFLPGFEAPTYKDTLLPKLPSCNLEI 180 Query: 181 IDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPI 240 IDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPI Sbjct: 181 IDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPI 240 Query: 241 NEPAPGRKKSQIQEYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVPSSYYRLLR 300 NEPAPGRKKSQIQEYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVPSSYYRLLR Sbjct: 241 NEPAPGRKKSQIQEYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVPSSYYRLLR 300 Query: 301 ENLKTSKIQVKENMDVLEELKILVDYDEKGYLLQIFTKPMQDRPTLFLEVIQRHNHQGFG 360 ENLKTSKIQVKENMDVLEELKILVDYDEKGYLLQIFTKPMQDRPTLFLEVIQRHNHQGFG Sbjct: 301 ENLKTSKIQVKENMDVLEELKILVDYDEKGYLLQIFTKPMQDRPTLFLEVIQRHNHQGFG 360 Query: 361 AGNFNSLFKAFEEEQALRGNLTDLETNGVRSGM 393 AGNFNSLFKAFEEEQALRGNLTDLETNGVRSGM Sbjct: 361 AGNFNSLFKAFEEEQALRGNLTDLETNGVRSGM 393 >5EC3-A nrPDB Length = 393 Score = 752 bits (1942), Expect = 0.0, Method: Compositional matrix adjust. Identities = 353/393 (89%), Positives = 378/393 (96%) Query: 1 MTTYSNKGPKPERGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSH 60 MTTYS+KG KPERGRFLHFHSVTFWVGNAKQAASFYC+KMGFEPLAY+GLETGSREVVSH Sbjct: 1 MTTYSDKGAKPERGRFLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSH 60 Query: 61 VIKQGKIVFVLCSALNPWNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVRE 120 VIKQGKIVFVL SALNPWNKEMGDHLVKHGDGVKDIAFEVEDC++IVQKARERGAKI+RE Sbjct: 61 VIKQGKIVFVLSSALNPWNKEMGDHLVKHGDGVKDIAFEVEDCDYIVQKARERGAKIMRE 120 Query: 121 PWVEEDKFGKVKFAVLQTYGDTTHTLVEKINYTGRFLPGFEAPTYKDTLLPKLPSCNLEI 180 PWVE+DKFGKVKFAVLQTYGDTTHTLVEK+NY G+FLPG+EAP + D LLPKLP C+LE+ Sbjct: 121 PWVEQDKFGKVKFAVLQTYGDTTHTLVEKMNYIGQFLPGYEAPAFMDPLLPKLPKCSLEM 180 Query: 181 IDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPI 240 IDHIVGNQPDQEM SASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPI Sbjct: 181 IDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPI 240 Query: 241 NEPAPGRKKSQIQEYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVPSSYYRLLR 300 NEPAPG+KKSQIQEYVDYNGGAGVQHIAL+TEDIIT IRHLRERG+EFL+VPS+YY+ LR Sbjct: 241 NEPAPGKKKSQIQEYVDYNGGAGVQHIALKTEDIITAIRHLRERGLEFLSVPSTYYKQLR 300 Query: 301 ENLKTSKIQVKENMDVLEELKILVDYDEKGYLLQIFTKPMQDRPTLFLEVIQRHNHQGFG 360 E LKT+KI+VKEN+D LEELKILVDYDEKGYLLQIFTKP+QDRPTLFLEVIQRHNHQGFG Sbjct: 301 EKLKTAKIKVKENIDALEELKILVDYDEKGYLLQIFTKPVQDRPTLFLEVIQRHNHQGFG 360 Query: 361 AGNFNSLFKAFEEEQALRGNLTDLETNGVRSGM 393 AGNFNSLFKAFEEEQ LRGNLT++ETNGV GM Sbjct: 361 AGNFNSLFKAFEEEQNLRGNLTNMETNGVVPGM 393 >1T47-A nrPDB Length = 381 Score = 320 bits (821), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 174/376 (46%), Positives = 223/376 (59%), Gaps = 14/376 (3%) Query: 9 PKPERGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIV 68 P P +G +V F VGNAKQAA +Y G + +AY G E GSRE S+V+ G Sbjct: 17 PFPVKG----MDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSAR 72 Query: 69 FVLCSAL---NPWNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVREPWVEE 125 FVL S + PW + DH+ +HGDGV D+A EV D A E GA+ V EP+ + Sbjct: 73 FVLTSVIKPATPWGHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELK 132 Query: 126 DKFGKVKFAVLQTYGDTTHTLVEKINYTGRFLPGFEAPTYKDTLLPKLPSCNLEIIDHIV 185 D+ G V A + TYG T HTLV++ Y G +LPG+ A ++ + IDH V Sbjct: 133 DEHGTVVLAAIATYGKTRHTLVDRTGYDGPYLPGYVAAA---PIVEPPAHRTFQAIDHCV 189 Query: 186 GNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAP 245 GN M +Y K + F + TEYS+L S VVA+ +K PINEPA Sbjct: 190 GNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPAL 249 Query: 246 GRKKSQIQEYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVPSSYYRLLRENLKT 305 +KKSQI EY+++ GGAGVQHIAL T DI+ T+R +R G++FL P SYY L E + Sbjct: 250 AKKKSQIDEYLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDSYYDTLGEWVGD 309 Query: 306 SKIQVKENMDVLEELKILVDYDEKGYLLQIFTKPMQDRPTLFLEVIQRHNHQGFGAGNFN 365 +++ V D L ELKIL D DE GYLLQIFTKP+QDRPT+F E+I+RH GFG GNF Sbjct: 310 TRVPV----DTLRELKILADRDEDGYLLQIFTKPVQDRPTVFFEIIERHGSMGFGKGNFK 365 Query: 366 SLFKAFEEEQALRGNL 381 +LF+A E EQ RGNL Sbjct: 366 ALFEAIEREQEKRGNL 381 >1SP9-A nrPDB Length = 445 Score = 184 bits (468), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 142/420 (33%), Positives = 211/420 (50%), Gaps = 62/420 (14%) Query: 1 MTTYSNKGPKPERGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSH 60 + + K PK ++ + FH + FW G+A A + +G A L TG+ S+ Sbjct: 29 FSKFVRKNPKSDKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASY 88 Query: 61 VIKQGKIVFVLCSALNP------------WNKEMGDH------LVKHGDGVKDIAFEVED 102 ++ G + F+ + +P + DH HG GV+ +A EVED Sbjct: 89 LLTSGDLRFLFTAPYSPSLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVED 148 Query: 103 CEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKINYTGR------F 156 E + GA P V + V A ++ YGD ++ ++Y F Sbjct: 149 AESAFSISVANGAIPSSPPIVLNEA---VTIAEVKLYGDV---VLRYVSYKAEDTEKSEF 202 Query: 157 LPGFEAPTYKDTLLPKLPSCNLEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQ 216 LPGFE +D L + +DH VGN P E+ A + FH+F Sbjct: 203 LPGFE--RVEDASSFPL-DYGIRRLDHAVGNVP--ELGPALTYVAGFTGFHQFAEFTADD 257 Query: 217 VHTEYSSLRSIVVANYEESIKMPINEPAPG-RKKSQIQEYVDYNGGAGVQHIALRTEDII 275 V T S L S V+A+ +E + +PINEP G ++KSQIQ Y+++N GAG+QH+AL +EDI Sbjct: 258 VGTAESGLNSAVLASNDEMVLLPINEPVHGTKRKSQIQTYLEHNEGAGLQHLALMSEDIF 317 Query: 276 TTIRHLRER----GMEFL-AVPSSYYRLLRENLKT--SKIQVKENMDVLEELKILVDYDE 328 T+R +R+R G +F+ + P +YY+ L++ + S Q+KE EEL ILVD D+ Sbjct: 318 RTLREMRKRSSIGGFDFMPSPPPTYYQNLKKRVGDVLSDDQIKE----CEELGILVDRDD 373 Query: 329 KGYLLQIFTKPMQDRPTLFLEVIQR-----HNHQG----------FGAGNFNSLFKAFEE 373 +G LLQIFTKP+ DRPT+F+E+IQR + +G FG GNF+ LFK+ EE Sbjct: 374 QGTLLQIFTKPLGDRPTIFIEIIQRVGCMMKDEEGKAYQSGGCGGFGKGNFSELFKSIEE 433 >3ZGJ-A nrPDB Length = 371 Score = 179 bits (455), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 113/375 (30%), Positives = 185/375 (49%), Gaps = 22/375 (5%) Query: 16 FLHFHSVT---------FWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGK 66 FLH+ + +V + ++A+ F + +GF PLA G TG+ + S V++ G+ Sbjct: 7 FLHWRAAMPPSDIAYAELYVADDREASGFLVDSLGFVPLAVAGPATGTHDRRSTVLRSGE 66 Query: 67 IVFVLCSALNPWNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVREPWVEED 126 + V+ AL P + + ++ +HGD + D+AF +D +A GA+ ++ P Sbjct: 67 VTLVVTQALAP-DTPVARYVERHGDSIADLAFGCDDVRSCFDRAVLAGAEALQAPTPSHR 125 Query: 127 KFGKVKFAVLQTYGDTTHTLVEKINYTGRFLPGFEAPTYKDTLLPKLP--SCNLEIIDHI 184 FA + +GD HTLV + G G P LLP + ++DH+ Sbjct: 126 AGQDAWFATVSGFGDIRHTLVPAADGDGA---GLLPPDRDWALLPAATGRTGPRPLLDHV 182 Query: 185 VGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPA 244 + S +E+Y ++S + +V + ++ I V N I + EP Sbjct: 183 AVCLESGTLRSTAEFYEAAFDMP-YYSSEYIEVGEQ--AMDMIFVRNAGGGITFTLIEPD 239 Query: 245 PGRKKSQIQEYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVPSSYYRLLRENLK 304 R QI +++ + G GVQH+A +DI+ ++R L +RG+ FL P +YY LL E + Sbjct: 240 DTRVPGQIDQFLSAHDGPGVQHLAFLVDDIVGSVRSLGDRGVAFLRTPGAYYDLLTERVG 299 Query: 305 TSKIQVKENMDVLEELKILVDYDEKGYLLQIFTKPMQDRPTLFLEVIQRHNHQGFGAGNF 364 + + ++ L E +L D DE GYLLQIFT+ R TLF E IQR+ +GFG+ N Sbjct: 300 A----MADAIEDLRETNVLADRDEWGYLLQIFTRSPYPRGTLFYEYIQRNGARGFGSSNI 355 Query: 365 NSLFKAFEEEQALRG 379 +L +A E E+ + G Sbjct: 356 KALAEAVEREREVAG 370 >1SP8-A nrPDB Length = 418 Score = 175 bits (443), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 122/370 (32%), Positives = 178/370 (48%), Gaps = 42/370 (11%) Query: 9 PKPERGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIV 68 P+ +R L FH V W +A AA + +G A L TG+ +H + Sbjct: 22 PRSDRFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNS---AHASLLLRSG 78 Query: 69 FVLCSALNPWNKEMGDHLV---------------KHGDGVKDIAFEVEDCEHIVQKARER 113 + P+ HG V+ +A V D E + + Sbjct: 79 SLSFLFTAPYAHGADAATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAA 138 Query: 114 GAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKINYTGR--FLPGFEAPTYKDTLLP 171 GA+ P D + A ++ YGD V + FLPGFE P Sbjct: 139 GARPAFGPV---DLGRGFRLAEVELYGDVVLRYVSYPDGAAGEPFLPGFEG-----VASP 190 Query: 172 KLPSCNLEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVAN 231 L DHIVGN P E+ A+ ++ FH F V T S L S+V+AN Sbjct: 191 GAADYGLSRFDHIVGNVP--ELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLAN 248 Query: 232 YEESIKMPINEPAPG-RKKSQIQEYVDYNGGAGVQHIALRTEDIITTIRHLRER----GM 286 E++ +P+NEP G +++SQIQ ++D++GG GVQH+AL ++D++ T+R ++ R G Sbjct: 249 NSENVLLPLNEPVHGTKRRSQIQTFLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGF 308 Query: 287 EFLAVPSS-YYRLLRENLKT--SKIQVKENMDVLEELKILVDYDEKGYLLQIFTKPMQDR 343 EF+A P+S YY +R ++ Q+KE +EL +LVD D++G LLQIFTKP+ DR Sbjct: 309 EFMAPPTSDYYDGVRRRAGDVLTEAQIKE----CQELGVLVDRDDQGVLLQIFTKPVGDR 364 Query: 344 PTLFLEVIQR 353 PTLFLE+IQR Sbjct: 365 PTLFLEIIQR 374 >2R5V-A nrPDB Length = 357 Score = 150 bits (380), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 106/354 (29%), Positives = 162/354 (45%), Gaps = 16/354 (4%) Query: 22 VTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSALNPWNKE 81 V +V N + AA + +K F A G S + S ++QG++ VL + + Sbjct: 9 VEMYVENLEVAAFSWVDKYAF---AVAGTSR-SADHRSIALRQGQVTLVLTEPTSDRHPA 64 Query: 82 MGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGD 141 +L HGDGV DIA D + A GA+ VR P + V A + +GD Sbjct: 65 AA-YLQTHGDGVADIAMATSDVAAAYEAAVRAGAEAVRAPGQHSEA--AVTTATIGGFGD 121 Query: 142 TTHTLVEKINYTGRFLPGFEAPTYKDTLLPKLPSCNLEIIDHIVGNQPDQEMESASEWYL 201 HTL+++ + PGF D +L IDH ++ E+Y Sbjct: 122 VVHTLIQRDGTSAELPPGFTGS--MDVTNHGKGDVDLLGIDHFAICLNAGDLGPTVEYYE 179 Query: 202 KNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGRKKSQIQEYVDYNGG 261 + L F + + D + ++ S VV + ++ + + EP QI E++ + G Sbjct: 180 RALGFRQIF---DEHIVVGAQAMNSTVVQSASGAVTLTLIEPDRNADPGQIDEFLKDHQG 236 Query: 262 AGVQHIALRTEDIITTIRHLRERGMEFLAVPSSYYRLLRENLKTSKIQVKENMDVLEELK 321 AGVQHIA + D + ++ L ERG+EFL P +YY LL E + ++D L Sbjct: 237 AGVQHIAFNSNDAVRAVKALSERGVEFLKTPGAYYDLLGERITLQ----THSLDDLRATN 292 Query: 322 ILVDYDEKGYLLQIFTKPMQDRPTLFLEVIQRHNHQGFGAGNFNSLFKAFEEEQ 375 +L D D G L QIFT R T+F EVI+R FG+ N +L++A E E+ Sbjct: 293 VLADEDHGGQLFQIFTASTHPRHTIFFEVIERQGAGTFGSSNIKALYEAVELER 346 >1CJX-A nrPDB Length = 357 Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 98/355 (27%), Positives = 163/355 (45%), Gaps = 43/355 (12%) Query: 42 FEPLAYKGLETGSREVVSHVIKQGKIVFVLCSALNPWNKEMGDHLVKHGDGVKDIAFEVE 101 FE + + + T R H+ +QG+I +L N N +HG V +AF V+ Sbjct: 30 FEIMGFTKVAT-HRSKNVHLYRQGEINLILN---NEPNSIASYFAAEHGPSVCGMAFRVK 85 Query: 102 DCEHIVQKARERGAKIV---------REPWVEEDKFGKVKFAVLQTYGDTTHTLVEKINY 152 D + +A E GA+ + P ++ G ++ +G+ + + I++ Sbjct: 86 DSQKAYNRALELGAQPIHIDTGPMELNLPAIK--GIGGAPLYLIDRFGEGSS--IYDIDF 141 Query: 153 TGRFLPGFEAPTYKDTLLPKLPSCNLEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSV 212 +L G E L++IDH+ N M + +Y K F Sbjct: 142 V--YLEGVERNPV---------GAGLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYF 190 Query: 213 DDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGRKKSQIQEYVDYNGGAGVQHIALRTE 272 D + EY+ L S ++ + I++P+NE + + QI+E++ G G+QH+A T+ Sbjct: 191 D---IKGEYTGLTSKAMSAPDGMIRIPLNEES-SKGAGQIEEFLMQFNGEGIQHVAFLTD 246 Query: 273 DIITTIRHLRERGMEFL-AVPSSYYRLLRENLKTSKIQVKENMDVLEELKILVDYD---- 327 D++ T L++ GM F+ A P +YY +L L E +D L+ IL+D Sbjct: 247 DLVKTWDALKKIGMRFMTAPPDTYYEMLEGRLPDH----GEPVDQLQARGILLDGSSVEG 302 Query: 328 EKGYLLQIFTKPMQDRPTLFLEVIQRHNHQGFGAGNFNSLFKAFEEEQALRGNLT 382 +K LLQIF++ + +F E IQR GFG GNF +LF++ E +Q RG L Sbjct: 303 DKRLLLQIFSETLMG--PVFFEFIQRKGDDGFGEGNFKALFESIERDQVRRGVLA 355 >5HMQ-A nrPDB Length = 637 Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 47/189 (24%), Positives = 86/189 (45%), Gaps = 13/189 (6%) Query: 177 NLEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESI 236 L IDH+ P + ++S W L F + D+ + Y ++S + + ++ Sbjct: 439 GLRRIDHMALALPAESLDS---WVLFYKSLFDFAADDEVVLPDPYGLVKSRALRSQCGTL 495 Query: 237 KMPINEPAPGRKKSQIQEYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVPSSYY 296 ++P+N + + I + G+GV HIA +DI + + G+ L +P +YY Sbjct: 496 RLPLN--ISENRNTAIAHALSSYRGSGVHHIAFDCDDIFREVARAKLAGVPLLEIPLNYY 553 Query: 297 RLLRENLKTSKIQVKENMDVLEELKILVDYDEK-GYLLQIFTKPMQDRPTLFLEVIQRH- 354 ++L E + L +L D D + G L ++T+P ++ F E+IQR Sbjct: 554 ----DDLAARFDFDDEFLSELAYYNVLYDRDAQGGELFHVYTEPFEE--RFFFEIIQRKA 607 Query: 355 NHQGFGAGN 363 + G+GA N Sbjct: 608 GYAGYGAAN 616 >1JC5-A nrPDB Length = 148 Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 16/115 (13%) Query: 181 IDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMP- 239 IDH+ PD + AS++Y + +H ++H E + + +V + K+ Sbjct: 10 IDHVAYACPDAD--EASKYYQETFGWH--------ELHREENPEQGVVEIMMAPAAKLTE 59 Query: 240 ----INEPAPGRKKSQIQEYV-DYNGGAGVQHIALRTEDIITTIRHLRERGMEFL 289 + AP +S + +++ +NG AG+ H+A R +DI LRERG++ L Sbjct: 60 HMTQVQVMAPLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLL 114 >4G6X-A nrPDB Length = 155 Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust. Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 23/146 (15%) Query: 17 LHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSRE---VVSHVIKQGKIVFVLCS 73 + H +V + +A SFY K+GF L + G+ VVS G + + S Sbjct: 25 MRIHLTNVFVDDQAKAESFYTGKLGF--LVKADVPVGADRWLTVVSPEAPDGTQLLLEPS 82 Query: 74 ---ALNPWNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGK 130 A+ P+ + + DG+ +F V+D ++ G + +EP G Sbjct: 83 SHAAVTPFKEAL------VADGIPAASFAVDDIAAEYERLSALGVRFTQEPT----DMGP 132 Query: 131 VKFAVLQTYGDTTHTLVE--KINYTG 154 V A+L DT L++ +I Y G Sbjct: 133 VVTAILD---DTCGNLIQLMQIAYDG 155 >1TKI-A nrPDB Length = 321 Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust. Identities = 33/141 (23%), Positives = 66/141 (46%), Gaps = 19/141 (13%) Query: 27 GNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQ---GKIVFVLCSALNPWNKEMG 83 G A+Q ++ F Y E +VVS G +V+VL S +NP+ E Sbjct: 149 GQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN 208 Query: 84 DHLVKH---------GDGVKDIAFEVED-CEHIV---QKARERGAKIVREPWVEEDKFGK 130 ++++ + K+I+ E D + ++ +K+R ++ ++ PW+++ K + Sbjct: 209 QQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQ-KIER 267 Query: 131 VKFAVLQT--YGDTTHTLVEK 149 V V++T + HTL++K Sbjct: 268 VSTKVIRTLKHRRYYHTLIKK 288 >4HC5-A nrPDB Length = 133 Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust. Identities = 26/104 (25%), Positives = 41/104 (39%), Gaps = 8/104 (7%) Query: 18 HFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSALNP 77 + HS T V + ++A FY N +GFE + L+ R V V+ G V L Sbjct: 13 YVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDPNMRFVT--VVPPGAQTQVAL-GLPS 69 Query: 78 WNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVREP 121 W ++ + G I+ D + + ERG + P Sbjct: 70 WYEDG-----RKPGGYTGISLITRDIDEAYKTLTERGVTFTKPP 108 >3L7V-A nrPDB Length = 295 Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust. Identities = 15/59 (25%), Positives = 28/59 (47%) Query: 70 VLCSALNPWNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKF 128 +L + PW E + L +GDG +++ ++ V K G +I +E W +E + Sbjct: 125 ILLGCILPWKAEAYEKLKAYGDGREELMTDIRGTSCFVIKFGVAGEQIAKEMWEKEGRM 183 >4MTS-A nrPDB Length = 131 Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust. Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 6/103 (5%) Query: 19 FHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSALNPW 78 HS+ V + + A FY + L + G R ++ V Q + + W Sbjct: 4 LHSM-LRVADLEAALEFYTRALDMRLLRRRDYPEG-RFTLAFVGYQDERAAAALELTHNW 61 Query: 79 NKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVREP 121 +++ GDG +A EVED +AR G ++ RE Sbjct: 62 DRDG----YTQGDGYGHLAIEVEDAAVTCARARALGYRVTREA 100 >5BRA-A nrPDB Length = 350 Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust. Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%) Query: 84 DHLVKHG-DGVKDIAFEVEDCEHIVQKARERGAKIV 118 ++L+ G D + + F VE E +++KARERG ++ Sbjct: 95 ENLIAQGVDAIAIVPFSVEAVEPVLKKARERGIVVI 130 >2EH6-A nrPDB Length = 375 Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust. Identities = 37/139 (26%), Positives = 56/139 (40%), Gaps = 17/139 (12%) Query: 76 NPWNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAV 135 NPW +E+ LVKH + F E + E K+ R+ W ++ K K KF Sbjct: 69 NPWQEELAHKLVKHFWTEGKVFFANSGTESV-----EAAIKLARKYWRDKGK-NKWKFIS 122 Query: 136 LQ------TYGDTTHTLVEKINYTGR-FLPGFEAPTYK--DTLLPKLPSCNLEIIDHIVG 186 + TYG + T K + +PGF D++ L II ++ Sbjct: 123 FENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKLNDIDSVYKLLDEETAGIIIEVI- 181 Query: 187 NQPDQEMESASEWYLKNLQ 205 Q + + ASE +L LQ Sbjct: 182 -QGEGGVNEASEDFLSKLQ 199 >6FDF-A nrPDB Length = 334 Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 1/58 (1%) Query: 159 GFEAPTYKDTLLPKLPSCNLEIIDHIVGNQPDQEMESASEWY-LKNLQFHRFWSVDDT 215 GFE + L +C +I+ I+ S S WY L L F WS+DD Sbjct: 129 GFEESKAAEECRKVLRNCGYNLIEGILSPNQFNIPNSRSRWYGLARLNFKGEWSIDDV 186 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1SQI-A nrPDB 589 e-168 5EC3-A nrPDB 583 e-167 1T47-A nrPDB 453 e-128 3ZGJ-A nrPDB 402 e-112 1SP9-A nrPDB 384 e-107 2R5V-A nrPDB 362 e-100 1SP8-A nrPDB 341 3e-94 1CJX-A nrPDB 327 6e-90 5HMQ-A nrPDB 213 8e-56 1JC5-A nrPDB 104 8e-23 Sequences not found previously or not previously below threshold: 6BU2-A nrPDB 56 3e-08 4MTS-A nrPDB 36 0.023 4G6X-A nrPDB 35 0.062 6BNX-A nrPDB 34 0.12 3L7T-A nrPDB 33 0.20 5UHJ-A nrPDB 32 0.55 4HC5-A nrPDB 31 0.68 5UMW-A nrPDB 31 0.97 6EHO-A nrPDB 31 1.1 4GHC-A nrPDB 30 1.9 2PJR-A nrPDB 29 2.8 6BBX-A nrPDB 29 3.0 1QHH-B nrPDB 29 3.4 1QHG-A nrPDB 29 3.4 2OHJ-A nrPDB 29 3.8 6CKY-A nrPDB 29 4.5 4MYM-A nrPDB 29 4.8 3L6D-A nrPDB 29 5.1 >1SQI-A nrPDB Length = 393 Score = 589 bits (1517), Expect = e-168, Method: Composition-based stats. Identities = 393/393 (100%), Positives = 393/393 (100%) Query: 1 MTTYSNKGPKPERGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSH 60 MTTYSNKGPKPERGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSH Sbjct: 1 MTTYSNKGPKPERGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSH 60 Query: 61 VIKQGKIVFVLCSALNPWNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVRE 120 VIKQGKIVFVLCSALNPWNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVRE Sbjct: 61 VIKQGKIVFVLCSALNPWNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVRE 120 Query: 121 PWVEEDKFGKVKFAVLQTYGDTTHTLVEKINYTGRFLPGFEAPTYKDTLLPKLPSCNLEI 180 PWVEEDKFGKVKFAVLQTYGDTTHTLVEKINYTGRFLPGFEAPTYKDTLLPKLPSCNLEI Sbjct: 121 PWVEEDKFGKVKFAVLQTYGDTTHTLVEKINYTGRFLPGFEAPTYKDTLLPKLPSCNLEI 180 Query: 181 IDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPI 240 IDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPI Sbjct: 181 IDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPI 240 Query: 241 NEPAPGRKKSQIQEYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVPSSYYRLLR 300 NEPAPGRKKSQIQEYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVPSSYYRLLR Sbjct: 241 NEPAPGRKKSQIQEYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVPSSYYRLLR 300 Query: 301 ENLKTSKIQVKENMDVLEELKILVDYDEKGYLLQIFTKPMQDRPTLFLEVIQRHNHQGFG 360 ENLKTSKIQVKENMDVLEELKILVDYDEKGYLLQIFTKPMQDRPTLFLEVIQRHNHQGFG Sbjct: 301 ENLKTSKIQVKENMDVLEELKILVDYDEKGYLLQIFTKPMQDRPTLFLEVIQRHNHQGFG 360 Query: 361 AGNFNSLFKAFEEEQALRGNLTDLETNGVRSGM 393 AGNFNSLFKAFEEEQALRGNLTDLETNGVRSGM Sbjct: 361 AGNFNSLFKAFEEEQALRGNLTDLETNGVRSGM 393 >5EC3-A nrPDB Length = 393 Score = 583 bits (1502), Expect = e-167, Method: Composition-based stats. Identities = 353/393 (89%), Positives = 378/393 (96%) Query: 1 MTTYSNKGPKPERGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSH 60 MTTYS+KG KPERGRFLHFHSVTFWVGNAKQAASFYC+KMGFEPLAY+GLETGSREVVSH Sbjct: 1 MTTYSDKGAKPERGRFLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSH 60 Query: 61 VIKQGKIVFVLCSALNPWNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVRE 120 VIKQGKIVFVL SALNPWNKEMGDHLVKHGDGVKDIAFEVEDC++IVQKARERGAKI+RE Sbjct: 61 VIKQGKIVFVLSSALNPWNKEMGDHLVKHGDGVKDIAFEVEDCDYIVQKARERGAKIMRE 120 Query: 121 PWVEEDKFGKVKFAVLQTYGDTTHTLVEKINYTGRFLPGFEAPTYKDTLLPKLPSCNLEI 180 PWVE+DKFGKVKFAVLQTYGDTTHTLVEK+NY G+FLPG+EAP + D LLPKLP C+LE+ Sbjct: 121 PWVEQDKFGKVKFAVLQTYGDTTHTLVEKMNYIGQFLPGYEAPAFMDPLLPKLPKCSLEM 180 Query: 181 IDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPI 240 IDHIVGNQPDQEM SASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPI Sbjct: 181 IDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPI 240 Query: 241 NEPAPGRKKSQIQEYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVPSSYYRLLR 300 NEPAPG+KKSQIQEYVDYNGGAGVQHIAL+TEDIIT IRHLRERG+EFL+VPS+YY+ LR Sbjct: 241 NEPAPGKKKSQIQEYVDYNGGAGVQHIALKTEDIITAIRHLRERGLEFLSVPSTYYKQLR 300 Query: 301 ENLKTSKIQVKENMDVLEELKILVDYDEKGYLLQIFTKPMQDRPTLFLEVIQRHNHQGFG 360 E LKT+KI+VKEN+D LEELKILVDYDEKGYLLQIFTKP+QDRPTLFLEVIQRHNHQGFG Sbjct: 301 EKLKTAKIKVKENIDALEELKILVDYDEKGYLLQIFTKPVQDRPTLFLEVIQRHNHQGFG 360 Query: 361 AGNFNSLFKAFEEEQALRGNLTDLETNGVRSGM 393 AGNFNSLFKAFEEEQ LRGNLT++ETNGV GM Sbjct: 361 AGNFNSLFKAFEEEQNLRGNLTNMETNGVVPGM 393 >1T47-A nrPDB Length = 381 Score = 453 bits (1164), Expect = e-128, Method: Composition-based stats. Identities = 173/377 (45%), Positives = 222/377 (58%), Gaps = 14/377 (3%) Query: 8 GPKPERGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKI 67 P P +G +V F VGNAKQAA +Y G + +AY G E GSRE S+V+ G Sbjct: 16 DPFPVKG----MDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSA 71 Query: 68 VFVLCS---ALNPWNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVREPWVE 124 FVL S PW + DH+ +HGDGV D+A EV D A E GA+ V EP+ Sbjct: 72 RFVLTSVIKPATPWGHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYEL 131 Query: 125 EDKFGKVKFAVLQTYGDTTHTLVEKINYTGRFLPGFEAPTYKDTLLPKLPSCNLEIIDHI 184 +D+ G V A + TYG T HTLV++ Y G +LPG+ A ++ + IDH Sbjct: 132 KDEHGTVVLAAIATYGKTRHTLVDRTGYDGPYLPGYVAAA---PIVEPPAHRTFQAIDHC 188 Query: 185 VGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPA 244 VGN M +Y K + F + TEYS+L S VVA+ +K PINEPA Sbjct: 189 VGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPA 248 Query: 245 PGRKKSQIQEYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVPSSYYRLLRENLK 304 +KKSQI EY+++ GGAGVQHIAL T DI+ T+R +R G++FL P SYY L E + Sbjct: 249 LAKKKSQIDEYLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDSYYDTLGEWVG 308 Query: 305 TSKIQVKENMDVLEELKILVDYDEKGYLLQIFTKPMQDRPTLFLEVIQRHNHQGFGAGNF 364 +++ +D L ELKIL D DE GYLLQIFTKP+QDRPT+F E+I+RH GFG GNF Sbjct: 309 DTRV----PVDTLRELKILADRDEDGYLLQIFTKPVQDRPTVFFEIIERHGSMGFGKGNF 364 Query: 365 NSLFKAFEEEQALRGNL 381 +LF+A E EQ RGNL Sbjct: 365 KALFEAIEREQEKRGNL 381 >3ZGJ-A nrPDB Length = 371 Score = 402 bits (1032), Expect = e-112, Method: Composition-based stats. Identities = 113/377 (29%), Positives = 183/377 (48%), Gaps = 22/377 (5%) Query: 14 GRFLHFHSV---------TFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQ 64 FLH+ + +V + ++A+ F + +GF PLA G TG+ + S V++ Sbjct: 5 FPFLHWRAAMPPSDIAYAELYVADDREASGFLVDSLGFVPLAVAGPATGTHDRRSTVLRS 64 Query: 65 GKIVFVLCSALNPWNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVREPWVE 124 G++ V+ AL P + + ++ +HGD + D+AF +D +A GA+ ++ P Sbjct: 65 GEVTLVVTQALAP-DTPVARYVERHGDSIADLAFGCDDVRSCFDRAVLAGAEALQAPTPS 123 Query: 125 EDKFGKVKFAVLQTYGDTTHTLVEKINYTGRFLPGFEAPTYKDTLLPKLPS--CNLEIID 182 FA + +GD HTLV + G G P LLP ++D Sbjct: 124 HRAGQDAWFATVSGFGDIRHTLVPAADGDGA---GLLPPDRDWALLPAATGRTGPRPLLD 180 Query: 183 HIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINE 242 H+ + S +E+Y ++S + +V ++ I V N I + E Sbjct: 181 HVAVCLESGTLRSTAEFYEAAFDMP-YYSSEYIEVG--EQAMDMIFVRNAGGGITFTLIE 237 Query: 243 PAPGRKKSQIQEYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVPSSYYRLLREN 302 P R QI +++ + G GVQH+A +DI+ ++R L +RG+ FL P +YY LL E Sbjct: 238 PDDTRVPGQIDQFLSAHDGPGVQHLAFLVDDIVGSVRSLGDRGVAFLRTPGAYYDLLTER 297 Query: 303 LKTSKIQVKENMDVLEELKILVDYDEKGYLLQIFTKPMQDRPTLFLEVIQRHNHQGFGAG 362 + + + ++ L E +L D DE GYLLQIFT+ R TLF E IQR+ +GFG+ Sbjct: 298 VGA----MADAIEDLRETNVLADRDEWGYLLQIFTRSPYPRGTLFYEYIQRNGARGFGSS 353 Query: 363 NFNSLFKAFEEEQALRG 379 N +L +A E E+ + G Sbjct: 354 NIKALAEAVEREREVAG 370 >1SP9-A nrPDB Length = 445 Score = 384 bits (986), Expect = e-107, Method: Composition-based stats. Identities = 138/415 (33%), Positives = 205/415 (49%), Gaps = 52/415 (12%) Query: 1 MTTYSNKGPKPERGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSH 60 + + K PK ++ + FH + FW G+A A + +G A L TG+ S+ Sbjct: 29 FSKFVRKNPKSDKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASY 88 Query: 61 VIKQGKIVFVLCSALNP------------WNKEMGDH------LVKHGDGVKDIAFEVED 102 ++ G + F+ + +P + DH HG GV+ +A EVED Sbjct: 89 LLTSGDLRFLFTAPYSPSLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVED 148 Query: 103 CEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEK---INYTGRFLPG 159 E + GA P V + V A ++ YGD V FLPG Sbjct: 149 AESAFSISVANGAIPSSPPIVLNEA---VTIAEVKLYGDVVLRYVSYKAEDTEKSEFLPG 205 Query: 160 FEAPTYKDTLLPKLPSCNLEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHT 219 FE +D L + +DH VGN P E+ A + FH+F V T Sbjct: 206 FER--VEDASSFPL-DYGIRRLDHAVGNVP--ELGPALTYVAGFTGFHQFAEFTADDVGT 260 Query: 220 EYSSLRSIVVANYEESIKMPINEPAPG-RKKSQIQEYVDYNGGAGVQHIALRTEDIITTI 278 S L S V+A+ +E + +PINEP G ++KSQIQ Y+++N GAG+QH+AL +EDI T+ Sbjct: 261 AESGLNSAVLASNDEMVLLPINEPVHGTKRKSQIQTYLEHNEGAGLQHLALMSEDIFRTL 320 Query: 279 RHLRER----GMEFL-AVPSSYYRLLRENLKTSKIQVKENMDVLEELKILVDYDEKGYLL 333 R +R+R G +F+ + P +YY+ L++ + + + + EEL ILVD D++G LL Sbjct: 321 REMRKRSSIGGFDFMPSPPPTYYQNLKKRVGD--VLSDDQIKECEELGILVDRDDQGTLL 378 Query: 334 QIFTKPMQDRPTLFLEVIQR-----HNHQG----------FGAGNFNSLFKAFEE 373 QIFTKP+ DRPT+F+E+IQR + +G FG GNF+ LFK+ EE Sbjct: 379 QIFTKPLGDRPTIFIEIIQRVGCMMKDEEGKAYQSGGCGGFGKGNFSELFKSIEE 433 >2R5V-A nrPDB Length = 357 Score = 362 bits (928), Expect = e-100, Method: Composition-based stats. Identities = 106/356 (29%), Positives = 161/356 (45%), Gaps = 16/356 (4%) Query: 20 HSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSALNPWN 79 V +V N + AA + +K F A G S + S ++QG++ VL + Sbjct: 7 DYVEMYVENLEVAAFSWVDKYAF---AVAGTSR-SADHRSIALRQGQVTLVLTEPTSDR- 61 Query: 80 KEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTY 139 +L HGDGV DIA D + A GA+ VR P + V A + + Sbjct: 62 HPAAAYLQTHGDGVADIAMATSDVAAAYEAAVRAGAEAVRAPGQHSEA--AVTTATIGGF 119 Query: 140 GDTTHTLVEKINYTGRFLPGFEAPTYKDTLLPKLPSCNLEIIDHIVGNQPDQEMESASEW 199 GD HTL+++ + PGF D +L IDH ++ E+ Sbjct: 120 GDVVHTLIQRDGTSAELPPGFTGS--MDVTNHGKGDVDLLGIDHFAICLNAGDLGPTVEY 177 Query: 200 YLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGRKKSQIQEYVDYN 259 Y + L F + + D + ++ S VV + ++ + + EP QI E++ + Sbjct: 178 YERALGFRQIF---DEHIVVGAQAMNSTVVQSASGAVTLTLIEPDRNADPGQIDEFLKDH 234 Query: 260 GGAGVQHIALRTEDIITTIRHLRERGMEFLAVPSSYYRLLRENLKTSKIQVKENMDVLEE 319 GAGVQHIA + D + ++ L ERG+EFL P +YY LL E + ++D L Sbjct: 235 QGAGVQHIAFNSNDAVRAVKALSERGVEFLKTPGAYYDLLGERITLQ----THSLDDLRA 290 Query: 320 LKILVDYDEKGYLLQIFTKPMQDRPTLFLEVIQRHNHQGFGAGNFNSLFKAFEEEQ 375 +L D D G L QIFT R T+F EVI+R FG+ N +L++A E E+ Sbjct: 291 TNVLADEDHGGQLFQIFTASTHPRHTIFFEVIERQGAGTFGSSNIKALYEAVELER 346 >1SP8-A nrPDB Length = 418 Score = 341 bits (875), Expect = 3e-94, Method: Composition-based stats. Identities = 131/404 (32%), Positives = 194/404 (48%), Gaps = 47/404 (11%) Query: 4 YSNKGPKPERGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIK 63 + P+ +R L FH V W +A AA + +G A L TG+ S +++ Sbjct: 17 FVRFNPRSDRFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLR 76 Query: 64 QGKIVFVLCSALNPWNKEMGDHL------------VKHGDGVKDIAFEVEDCEHIVQKAR 111 G + F+ + L HG V+ +A V D E + + Sbjct: 77 SGSLSFLFTAPYAHGADAATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASV 136 Query: 112 ERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKINYTG--RFLPGFEAPTYKDTL 169 GA+ P D + A ++ YGD V + FLPGFE Sbjct: 137 AAGARPAFGPV---DLGRGFRLAEVELYGDVVLRYVSYPDGAAGEPFLPGFEG-----VA 188 Query: 170 LPKLPSCNLEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVV 229 P L DHIVGN P E+ A+ ++ FH F V T S L S+V+ Sbjct: 189 SPGAADYGLSRFDHIVGNVP--ELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVL 246 Query: 230 ANYEESIKMPINEPAPG-RKKSQIQEYVDYNGGAGVQHIALRTEDIITTIRHLRER---- 284 AN E++ +P+NEP G +++SQIQ ++D++GG GVQH+AL ++D++ T+R ++ R Sbjct: 247 ANNSENVLLPLNEPVHGTKRRSQIQTFLDHHGGPGVQHMALASDDVLRTLREMQARSAMG 306 Query: 285 GMEFLAVPSS-YYRLLRENLKTSKIQVKENMDVLEELKILVDYDEKGYLLQIFTKPMQDR 343 G EF+A P+S YY +R + + + +EL +LVD D++G LLQIFTKP+ DR Sbjct: 307 GFEFMAPPTSDYYDGVRRRAGD--VLTEAQIKECQELGVLVDRDDQGVLLQIFTKPVGDR 364 Query: 344 PTLFLEVIQR-----HNHQG----------FGAGNFNSLFKAFE 372 PTLFLE+IQR + +G FG GNF+ LFK+ E Sbjct: 365 PTLFLEIIQRIGCMEKDEKGQEYQKGGCGGFGKGNFSQLFKSIE 408 >1CJX-A nrPDB Length = 357 Score = 327 bits (837), Expect = 6e-90, Method: Composition-based stats. Identities = 98/353 (27%), Positives = 161/353 (45%), Gaps = 39/353 (11%) Query: 42 FEPLAYKGLETGSREVVSHVIKQGKIVFVLCSALNPWNKEMGDHLVKHGDGVKDIAFEVE 101 FE + + + T R H+ +QG+I +L N N +HG V +AF V+ Sbjct: 30 FEIMGFTKVAT-HRSKNVHLYRQGEINLILN---NEPNSIASYFAAEHGPSVCGMAFRVK 85 Query: 102 DCEHIVQKARERGAKIVR---EPWVEE----DKFGKVKFAVLQTYGDTTHTLVEKINYTG 154 D + +A E GA+ + P G ++ +G+ + + I++ Sbjct: 86 DSQKAYNRALELGAQPIHIDTGPMELNLPAIKGIGGAPLYLIDRFGEGSS--IYDIDFV- 142 Query: 155 RFLPGFEAPTYKDTLLPKLPSCNLEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDD 214 +L G E L++IDH+ N M + +Y K F D Sbjct: 143 -YLEGVERNPV---------GAGLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFD- 191 Query: 215 TQVHTEYSSLRSIVVANYEESIKMPINEPAPGRKKSQIQEYVDYNGGAGVQHIALRTEDI 274 + EY+ L S ++ + I++P+NE + + QI+E++ G G+QH+A T+D+ Sbjct: 192 --IKGEYTGLTSKAMSAPDGMIRIPLNEES-SKGAGQIEEFLMQFNGEGIQHVAFLTDDL 248 Query: 275 ITTIRHLRERGMEFL-AVPSSYYRLLRENLKTSKIQVKENMDVLEELKILVDYD----EK 329 + T L++ GM F+ A P +YY +L L E +D L+ IL+D +K Sbjct: 249 VKTWDALKKIGMRFMTAPPDTYYEMLEGRLPDH----GEPVDQLQARGILLDGSSVEGDK 304 Query: 330 GYLLQIFTKPMQDRPTLFLEVIQRHNHQGFGAGNFNSLFKAFEEEQALRGNLT 382 LLQIF++ + +F E IQR GFG GNF +LF++ E +Q RG L Sbjct: 305 RLLLQIFSETLM--GPVFFEFIQRKGDDGFGEGNFKALFESIERDQVRRGVLA 355 >5HMQ-A nrPDB Length = 637 Score = 213 bits (543), Expect = 8e-56, Method: Composition-based stats. Identities = 70/364 (19%), Positives = 133/364 (36%), Gaps = 46/364 (12%) Query: 22 VTFWVGNAKQAA-SFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSALNPWNK 80 + F V A A + ++GF R +++QG I VL Sbjct: 301 LEFAVDEAVGARLGNWLKRLGFAEAGK------HRSKEVQLLRQGDINIVLN---AEPYS 351 Query: 81 EMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVRE-------PWVEEDKFGKVKF 133 + HG + A V+D + +++A + R Sbjct: 352 FGHNFFEAHGPSLCATALRVKDQQAALKRATAFRGQPFRGLVGPNECEVPAVRAPDGSLL 411 Query: 134 AVLQTYGDTTHTLVEKINYTGRFLPGFEAPTYKDTLLPKLPSCNLEIIDHIVGNQPDQEM 193 +++ G HTL +++ + L IDH+ P + + Sbjct: 412 YLVEQ-GTAGHTL-YDTDFSLD--------------NNATATGGLRRIDHMALALPAESL 455 Query: 194 ESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGRKKSQIQ 253 +S +Y F + D+ + Y ++S + + ++++P+N + + I Sbjct: 456 DSWVLFY---KSLFDFAADDEVVLPDPYGLVKSRALRSQCGTLRLPLN--ISENRNTAIA 510 Query: 254 EYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVPSSYYRLLRENLKTSKIQVKEN 313 + G+GV HIA +DI + + G+ L +P +YY +L E Sbjct: 511 HALSSYRGSGVHHIAFDCDDIFREVARAKLAGVPLLEIPLNYYD----DLAARFDFDDEF 566 Query: 314 MDVLEELKILVDYDEK-GYLLQIFTKPMQDRPTLFLEVIQRH-NHQGFGAGNFNSLFKAF 371 + L +L D D + G L ++T+P ++R E+IQR + G+GA N A Sbjct: 567 LSELAYYNVLYDRDAQGGELFHVYTEPFEERFFF--EIIQRKAGYAGYGAANVAVRLAAM 624 Query: 372 EEEQ 375 + + Sbjct: 625 AKAR 628 >1JC5-A nrPDB Length = 148 Score = 104 bits (259), Expect = 8e-23, Method: Composition-based stats. Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 16/115 (13%) Query: 181 IDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMP- 239 IDH+ PD + AS++Y + +H ++H E + + +V + K+ Sbjct: 10 IDHVAYACPDAD--EASKYYQETFGWH--------ELHREENPEQGVVEIMMAPAAKLTE 59 Query: 240 ----INEPAPGRKKSQIQEYV-DYNGGAGVQHIALRTEDIITTIRHLRERGMEFL 289 + AP +S + +++ +NG AG+ H+A R +DI LRERG++ L Sbjct: 60 HMTQVQVMAPLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLL 114 Score = 34.7 bits (78), Expect = 0.077, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 50/123 (40%), Gaps = 5/123 (4%) Query: 16 FLHFHSVTFWVGNAKQAASFYCNKMGF-EPLAYKGLETGSREVVSHVIKQGKIVFVLCSA 74 F+ V + +A +A+ +Y G+ E + E G E++ + Sbjct: 7 FICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQV 66 Query: 75 LNPWNKE--MGDHLVKHG--DGVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGK 130 + P N E + L KH G+ +A+ V+D + + RERG +++ + + Sbjct: 67 MAPLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNR 126 Query: 131 VKF 133 + F Sbjct: 127 INF 129 >6BU2-A nrPDB Length = 151 Score = 55.9 bits (133), Expect = 3e-08, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 57/146 (39%), Gaps = 16/146 (10%) Query: 171 PKLPSCNLEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVA 230 L + + +DH+ +++ A EWY +L + +R ++A Sbjct: 4 HMLATSLVTGLDHVGIAV--ADLDVAIEWYHDHLGMILVHEEINDD-----QGIREALLA 56 Query: 231 NYEESIKMPINEPAPGRKKSQIQEYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLA 290 + ++ + AP + S I +++D G G+Q +A R D+ R LR +G+ + Sbjct: 57 VPGSAAQIQL--MAPLDESSVIAKFLDK-RGPGIQQLACRVSDLDAMCRRLRSQGVRLV- 112 Query: 291 VPSSYYRLLRENLKTSKIQVKENMDV 316 Y R S+I D Sbjct: 113 -----YETARRGTANSRINFIHPKDA 133 Score = 39.0 bits (89), Expect = 0.004, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 49/130 (37%), Gaps = 1/130 (0%) Query: 19 FHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSALNPW 78 V V + A +Y + +G L ++ + + + G + A Sbjct: 14 LDHVGIAVADLDVAIEWYHDHLGM-ILVHEEINDDQGIREALLAVPGSAAQIQLMAPLDE 72 Query: 79 NKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQT 138 + + L K G G++ +A V D + + ++ R +G ++V E ++ F + Sbjct: 73 SSVIAKFLDKRGPGIQQLACRVSDLDAMCRRLRSQGVRLVYETARRGTANSRINFIHPKD 132 Query: 139 YGDTTHTLVE 148 G LVE Sbjct: 133 AGGVLIELVE 142 >4MTS-A nrPDB Length = 131 Score = 36.3 bits (82), Expect = 0.023, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 42/115 (36%), Gaps = 5/115 (4%) Query: 21 SVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSALNPWNK 80 V + + A FY + L + G R ++ V Q + + W++ Sbjct: 5 HSMLRVADLEAALEFYTRALDMRLLRRRDYPEG-RFTLAFVGYQDERAAAALELTHNWDR 63 Query: 81 EMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAV 135 + GDG +A EVED +AR G ++ RE + + + F Sbjct: 64 DGY----TQGDGYGHLAIEVEDAAVTCARARALGYRVTREAGLMQHGRSVIAFLE 114 Score = 28.2 bits (61), Expect = 6.5, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 33/121 (27%), Gaps = 28/121 (23%) Query: 191 QEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGRKKS 250 ++E+A E+Y + L D V +E + + Sbjct: 11 ADLEAALEFYTRALDMRLLRRRDY-----PEGRFTLAFVGYQDERAAAALELTHNWDRDG 65 Query: 251 QIQEYVDYNGGAGVQHIALRTEDIITTIRHLRERG----------------MEFLAVPSS 294 Y G G H+A+ ED T R G + FL P Sbjct: 66 -------YTQGDGYGHLAIEVEDAAVTCARARALGYRVTREAGLMQHGRSVIAFLEDPDG 118 Query: 295 Y 295 Y Sbjct: 119 Y 119 >4G6X-A nrPDB Length = 155 Score = 34.7 bits (78), Expect = 0.062, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 42/108 (38%), Gaps = 6/108 (5%) Query: 17 LHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSALN 76 + H +V + +A SFY K+GF L + G+ ++ V + L L Sbjct: 25 MRIHLTNVFVDDQAKAESFYTGKLGF--LVKADVPVGADRWLTVVSPEAPDGTQL--LLE 80 Query: 77 PWNKEMGDHLVKH--GDGVKDIAFEVEDCEHIVQKARERGAKIVREPW 122 P + + DG+ +F V+D ++ G + +EP Sbjct: 81 PSSHAAVTPFKEALVADGIPAASFAVDDIAAEYERLSALGVRFTQEPT 128 Score = 29.7 bits (65), Expect = 2.4, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 38/111 (34%), Gaps = 10/111 (9%) Query: 183 HIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINE 242 H+ N + A +Y L F + V ++V + ++ + E Sbjct: 28 HLT-NVFVDDQAKAESFYTGKLGF-----LVKADVPVGADRWLTVVSPEAPDGTQL-LLE 80 Query: 243 PAPGRKKSQIQEYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVPS 293 P+ + +E + + G+ + +DI L G+ F P+ Sbjct: 81 PSSHAAVTPFKEALVAD---GIPAASFAVDDIAAEYERLSALGVRFTQEPT 128 >6BNX-A nrPDB Length = 296 Score = 34.0 bits (76), Expect = 0.12, Method: Composition-based stats. Identities = 39/285 (13%), Positives = 80/285 (28%), Gaps = 50/285 (17%) Query: 13 RGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLC 72 + + VG+ + +Y G + L + + F + Sbjct: 25 KHDSKRMLHAVYRVGDLDRTIKYYTECFGMKLLRKRDVPDEKYTNAFLGFGPENTNFAVE 84 Query: 73 SALNPWNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVK 132 +N + + G G A +D + + + +G KI REP + + Sbjct: 85 LT---YNYGVDKY--DIGTGFGHFAIANDDVYKLAENIKSKGGKITREPGPVKGGSTVIA 139 Query: 133 FAVLQTYGDTTHTLVEKINYTGRFLPGFEAPTYKDTLLPKLPSCNLEIIDHIVGNQPDQE 192 FA + G + + L + Sbjct: 140 FAQ---------------DPDGYMFELIQRADTPEPL--------------CQVMLRVGD 170 Query: 193 MESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGRKKSQI 252 +E + ++Y K L D +I + Y + K + E + Sbjct: 171 LERSIKFYEKALGMKLLRKKDVPDYK------YTIAMLGYADEDKTTVLELTYNYGVT-- 222 Query: 253 QEYVDYNGGAGVQHIALRTEDIITTIRHL----RERGMEFLAVPS 293 +Y+ G +A+ T D+ + + +E G + L P Sbjct: 223 ----EYSKGNAYAQVAIGTNDVYKSAEAVDLATKELGGKILRQPG 263 >3L7T-A nrPDB Length = 134 Score = 33.2 bits (74), Expect = 0.20, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 6/106 (5%) Query: 15 RFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVF-VLCS 73 + H V V + ++ FY N++GFE + + R +K G I + + Sbjct: 2 KLKAVHHVALIVSDYDKSYEFYVNQLGFEVI--RENHRPKRHDYKLDLKCGDIELEIFGN 59 Query: 74 ALNPWN---KEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAK 116 L N + G++ +AF VED E Q+ G + Sbjct: 60 KLTDSNYCAPPERISWPREACGLRHLAFYVEDVEASRQELIALGIR 105 Score = 30.5 bits (67), Expect = 1.3, Method: Composition-based stats. Identities = 21/140 (15%), Positives = 45/140 (32%), Gaps = 13/140 (9%) Query: 178 LEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIK 237 L+ + H+ D + E+Y+ L F + H L+ I+ Sbjct: 3 LKAVHHVALIVSDYDKSY--EFYVNQLGFEVIRENHRPKRHDYKLDLK-------CGDIE 53 Query: 238 MPI--NEPAPGRKKSQIQEYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVPSSY 295 + I N+ + + G++H+A ED+ + + L G+ V Y Sbjct: 54 LEIFGNKLTDSNYCAPPERISWPREACGLRHLAFYVEDVEASRQELIALGIRVEEV--RY 111 Query: 296 YRLLRENLKTSKIQVKENMD 315 + + ++ Sbjct: 112 DDYTGKKMAFFFDPDGLPLE 131 >5UHJ-A nrPDB Length = 129 Score = 31.7 bits (70), Expect = 0.55, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 40/118 (33%), Gaps = 12/118 (10%) Query: 18 HFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSALNP 77 H ++ +V + +A FY N +GFE + G V + VLC+ P Sbjct: 7 HIGTIDVFVNDQDKAIDFYVNTLGFEL--REDQAFGPMRWVEVAPAGSQTRIVLCTKHFP 64 Query: 78 WNKE--MGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKF 133 +E +G DI ED + ++ RG R P F Sbjct: 65 VYEEGKIGRFT--------DIQLVTEDIKATHEELVRRGVNFTRAPEQMPFGGANASF 114 Score = 28.6 bits (62), Expect = 4.9, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 44/115 (38%), Gaps = 18/115 (15%) Query: 180 IIDHI-VGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKM 238 +I HI + + + A ++Y+ L F + +R + VA ++ Sbjct: 4 MISHIGTIDVFVNDQDKAIDFYVNTLGF-ELREDQ------AFGPMRWVEVAPAGSQTRI 56 Query: 239 PI-NEPAPGRKKSQIQEYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVP 292 + + P ++ +I + D I L TEDI T L RG+ F P Sbjct: 57 VLCTKHFPVYEEGKIGRFTD---------IQLVTEDIKATHEELVRRGVNFTRAP 102 >4HC5-A nrPDB Length = 133 Score = 31.3 bits (69), Expect = 0.68, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 40/120 (33%), Gaps = 10/120 (8%) Query: 20 HSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSR-EVVSHVIKQGKIVFVLCSALNPW 78 HS T V + ++A FY N +GFE + L+ R V Q ++ L S Sbjct: 15 HSATIIVSDQEKALDFYVNTLGFEKVFDNQLDPNMRFVTVVPPGAQTQVALGLPSWYEDG 74 Query: 79 NKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQT 138 K G I+ D + + ERG + P + F+ Sbjct: 75 RKPGGY---------TGISLITRDIDEAYKTLTERGVTFTKPPEMMPWGQRATWFSDPDG 125 Score = 31.3 bits (69), Expect = 0.85, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 39/104 (37%), Gaps = 21/104 (20%) Query: 192 EMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPA---PGRK 248 + E A ++Y+ L F + + ++R + V ++ + P+ GRK Sbjct: 23 DQEKALDFYVNTLGFEKVFDNQLD------PNMRFVTVVPPGAQTQVALGLPSWYEDGRK 76 Query: 249 KSQIQEYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVP 292 G I+L T DI + L ERG+ F P Sbjct: 77 PG------------GYTGISLITRDIDEAYKTLTERGVTFTKPP 108 >5UMW-A nrPDB Length = 151 Score = 30.9 bits (68), Expect = 0.97, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 42/118 (35%), Gaps = 6/118 (5%) Query: 18 HFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGS-REVVSHVIKQGKIVFVLCSALN 76 VT V + A FY K+GFE + G R + Q + VL Sbjct: 20 RLSHVTVPVLDQDSAKEFYTEKLGFEV--RNDMTMGGLRWLTVGPKDQPDVEMVLRRVGA 77 Query: 77 P-WNKEMGDHLVKH-GDGVKDIA-FEVEDCEHIVQKARERGAKIVREPWVEEDKFGKV 131 P +++E + L GV + V+D ++ R G ++EP V Sbjct: 78 PEYDEETAEQLRDLVAKGVIGVGVLHVDDTRATYERYRAAGVIFIQEPVKRPYGTEAV 135 >6EHO-A nrPDB Length = 723 Score = 30.9 bits (68), Expect = 1.1, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 37/124 (29%), Gaps = 11/124 (8%) Query: 1 MTTYSNKGPKPERGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSH 60 TTY+N K + G + + Y +G L + H Sbjct: 236 FTTYANGSCKADLGALELWRTSDLGKSFKTIGVKIYSFGLGGRFLFASVMADKDTTRRIH 295 Query: 61 VIK-QGKIVFV----------LCSALNPWNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQK 109 V QG + S L + + H+ + GD F +D + K Sbjct: 296 VSTDQGDTWSMAQLPSVGQEQFYSILAANDDMVFMHVDEPGDTGFGTIFTSDDRGIVYSK 355 Query: 110 ARER 113 + +R Sbjct: 356 SLDR 359 >4GHC-A nrPDB Length = 365 Score = 29.7 bits (65), Expect = 1.9, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 78/273 (28%), Gaps = 61/273 (22%) Query: 5 SNKGPKPERG--RFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVI 62 SN+ PKP L V + ++ +FY + +G + + Sbjct: 2 SNEIPKPVAPAPDILRCAYAELVVTDLAKSRNFYVDVLGLHVS--------YEDENQIYL 53 Query: 63 KQGKIVFVLCSALNPWNKEMGDHLVKHGDGVKDIAFEV---EDCEHIVQKARERGAKIVR 119 + + F+ + + +K +AF V ED + +E G + R Sbjct: 54 RSFE-EFIHHNLVLTKGPVAA---------LKAMAFRVRTPEDVDKAEAYYQELGCRTER 103 Query: 120 EPWVEEDKFGKVKFAVLQTYGDTTHTLVEKINYTGRFLPGFEAPTYKDTLLPKLPSCNLE 179 +D F ++ GD + + + + F + L Sbjct: 104 ----RKDGF-------VKGIGD-ALRVEDPLGFPYEFFFETTHVERLHMRYDLYSAGELV 151 Query: 180 IIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMP 239 +DH PD YL++L F T Y++ Sbjct: 152 RLDHFNQVTPD---VPRGRKYLEDLGFR-VTEDIQDDEGTTYAAWM-------------- 193 Query: 240 INEPAPGRKKSQI-QEYVDYNGGAGVQHIALRT 271 +K + + G + H+A T Sbjct: 194 -------HRKGTVHDTALTGGNGPRLHHVAFST 219 >2PJR-A nrPDB Length = 548 Score = 29.4 bits (64), Expect = 2.8, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 31/73 (42%), Gaps = 4/73 (5%) Query: 317 LEELKILVDYDEKGYLLQIFTKPMQDRPTLFLEVIQRHNHQGFGAGNFNSLFKAFEE-EQ 375 L+ +++++ +I+T+ + +P L+ E + + F AG +A E E+ Sbjct: 293 LQAANEVIEHNVNRKPKRIWTENPEGKPILYYEAMNEADEAQFVAGRIR---EAVERGER 349 Query: 376 ALRGNLTDLETNG 388 R TN Sbjct: 350 RYRDFAVLYRTNA 362 >6BBX-A nrPDB Length = 144 Score = 29.4 bits (64), Expect = 3.0, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 41/124 (33%), Gaps = 18/124 (14%) Query: 13 RGRFLHFHSVTFW---VGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVF 69 RG + V + V + ++A FY +GF+ LA + G V+ +V Sbjct: 17 RGSHMAISHVQLFSVPVSDQEKAKDFYVETVGFDLLADQPGVHGRWLQVAPKGADTSLVL 76 Query: 70 VLCSALNPWNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAK---IVREPWVEED 126 V P ++ + +D + + +ERG PW + Sbjct: 77 VDWFPTMPPG------------SLRGLLLRTDDVDADCARLQERGVAVDGPKNTPWGRQA 124 Query: 127 KFGK 130 F Sbjct: 125 MFSD 128 >1QHH-B nrPDB Length = 273 Score = 29.0 bits (63), Expect = 3.4, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 31/73 (42%), Gaps = 4/73 (5%) Query: 317 LEELKILVDYDEKGYLLQIFTKPMQDRPTLFLEVIQRHNHQGFGAGNFNSLFKAFEE-EQ 375 L+ +++++ +I+T+ + +P L+ E + + F AG +A E E+ Sbjct: 126 LQAANEVIEHNVNRKPKRIWTENPEGKPILYYEAMNEADEAQFVAGRIR---EAVERGER 182 Query: 376 ALRGNLTDLETNG 388 R TN Sbjct: 183 RYRDFAVLYRTNA 195 >1QHG-A nrPDB Length = 724 Score = 29.0 bits (63), Expect = 3.4, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 31/73 (42%), Gaps = 4/73 (5%) Query: 317 LEELKILVDYDEKGYLLQIFTKPMQDRPTLFLEVIQRHNHQGFGAGNFNSLFKAFEE-EQ 375 L+ +++++ +I+T+ + +P L+ E + + F AG +A E E+ Sbjct: 293 LQAANEVIEHNVNRKPKRIWTENPEGKPILYYEAMNEADEAQFVAGRIR---EAVERGER 349 Query: 376 ALRGNLTDLETNG 388 R TN Sbjct: 350 RYRDFAVLYRTNA 362 >2OHJ-A nrPDB Length = 404 Score = 29.0 bits (63), Expect = 3.8, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 31/86 (36%), Gaps = 5/86 (5%) Query: 46 AYKGLETGSREVVSHVIKQGKIVFVLCSALNPWNKEMGDHLVKHGDGVKDIAFEVEDCEH 105 AY G TG + VI + + + + + G V+ +D Sbjct: 246 AYTGWATGMVDERVTVIYD-----TMHGSTRKMAHAIAEGAMSEGVDVRVYCLHEDDRSE 300 Query: 106 IVQKARERGAKIVREPWVEEDKFGKV 131 IV+ E GA + P + ++ + V Sbjct: 301 IVKDILESGAIALGAPTIYDEPYPSV 326 >6CKY-A nrPDB Length = 155 Score = 28.6 bits (62), Expect = 4.5, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 6/109 (5%) Query: 18 HFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGS-REVVSHVIKQGKIVFVLCSALN 76 VT V + A +FY K+GFE + G R + + ++ VL Sbjct: 24 RLSHVTIPVLDQDSAKAFYTEKLGFEV--RNDMTIGELRWLTVGPKDEPEVEMVLRKVGP 81 Query: 77 P-WNKEMGDHLVKH-GDGVKDIA-FEVEDCEHIVQKARERGAKIVREPW 122 P +++E H GV + VE+ ++ R+ G V+EP Sbjct: 82 PEYDEETTAHFRDLIAKGVIGVGVLHVENTRATYERLRQAGVTFVQEPV 130 >4MYM-A nrPDB Length = 176 Score = 28.6 bits (62), Expect = 4.8, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 14/23 (60%) Query: 273 DIITTIRHLRERGMEFLAVPSSY 295 +I T LR RG+EF + P+ Y Sbjct: 110 EIDTAYERLRARGIEFYSPPADY 132 >3L6D-A nrPDB Length = 306 Score = 28.6 bits (62), Expect = 5.1, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 15/28 (53%) Query: 349 EVIQRHNHQGFGAGNFNSLFKAFEEEQA 376 +V+QR G+G + + K+F EQ Sbjct: 271 QVVQRAAAMGYGDQDIAATTKSFAREQE 298 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.310 0.125 0.308 Lambda K H 0.267 0.0381 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,513,956 Number of Sequences: 36641 Number of extensions: 521544 Number of successful extensions: 1702 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 32 Number of HSP's successfully gapped in prelim test: 22 Number of HSP's that attempted gapping in prelim test: 1566 Number of HSP's gapped (non-prelim): 70 length of query: 393 length of database: 10,336,785 effective HSP length: 99 effective length of query: 294 effective length of database: 6,709,326 effective search space: 1972541844 effective search space used: 1972541844 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 60 (27.8 bits)