BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P32738 (640 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1T1U-A nrPDB 1323 0.0 2FY4-A nrPDB 1089 0.0 1T7N-A nrPDB 501 e-142 1S5O-A nrPDB 482 e-136 1XMD-A nrPDB 262 3e-70 2FYO-A nrPDB 242 5e-64 6NZS-A nrPDB 36 0.060 5T4O-G nrPDB 33 0.51 1FS0-G nrPDB 33 0.52 6JRL-A nrPDB 31 1.3 3JB9-Y nrPDB 31 1.9 1GPP-A nrPDB 29 5.4 1JVA-A nrPDB 29 6.1 >1T1U-A nrPDB Length = 639 Score = 1323 bits (3425), Expect = 0.0, Method: Compositional matrix adjust. Identities = 634/639 (99%), Positives = 635/639 (99%) Query: 2 PILEKAPQKMPVKASSWEELDLPKLPVPPLQQTLATYLQCMQHLVPEEQFRKSQAIVKRF 61 PILEKAPQKMPVKASSWEELDLPKLPVPPLQQTLATYLQCMQHLVPEEQFRKSQAIVKRF Sbjct: 1 PILEKAPQKMPVKASSWEELDLPKLPVPPLQQTLATYLQCMQHLVPEEQFRKSQAIVKRF 60 Query: 62 GAPGGLGETLQEKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFQDTN 121 GAPGGLGETLQEKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFQDTN Sbjct: 61 GAPGGLGETLQEKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFQDTN 120 Query: 122 DQLRFAACLISGVLSYKTLLDSHSLPTDWAKGQLSGQPLCMKQYYRLFSSYRLPGHTQDT 181 DQLRFAACLISGVLSYKTLLDSHSLPTDWAKGQLSGQPLCMKQYYRLFSSYRLPGHTQDT Sbjct: 121 DQLRFAACLISGVLSYKTLLDSHSLPTDWAKGQLSGQPLCMKQYYRLFSSYRLPGHTQDT 180 Query: 182 LVAQKSSIMPEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPP 241 LVAQKSSIMPEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPP Sbjct: 181 LVAQKSSIMPEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPP 240 Query: 242 IGLLTSDGRSEWAKARTVLLKDSTNRDSLDMIERCICLVCLDGPGTGELSDTHRALQLLH 301 IGLLTSDGRSEWAKARTVLLKDSTNRDSLDMIERCICLVCLDGPGTGELSDTHRALQLLH Sbjct: 241 IGLLTSDGRSEWAKARTVLLKDSTNRDSLDMIERCICLVCLDGPGTGELSDTHRALQLLH 300 Query: 302 GGGCSLNGANRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMMTSNKKLV 361 GGGCSLNGANRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMMTSNKKLV Sbjct: 301 GGGCSLNGANRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMMTSNKKLV 360 Query: 362 RADSVSELPAPRRLRLKCSPETQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKY 421 RADSVSELPAPRRLR KCSPETQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKY Sbjct: 361 RADSVSELPAPRRLRWKCSPETQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKY 420 Query: 422 SPDGFIQVALQLAYYRLYQRLVPTYESASIRRFQEGRVDNIRSATPEALAFVQAMTDHKA 481 SPDGFIQVALQLAYYRLYQRLVPTYESASIRRFQEGRVDNIRSATPEALAFVQAMTDHKA Sbjct: 421 SPDGFIQVALQLAYYRLYQRLVPTYESASIRRFQEGRVDNIRSATPEALAFVQAMTDHKA 480 Query: 482 AMPASEKLQLLQTAMQAHKQYTVMAITGMAIDNHLLALRELARDLCKEPPEMFMDETYLM 541 AMPASEKLQLLQTAMQA +YTVMAITGMAIDNHLLALRELARDLCKEPPEMFMDETYLM Sbjct: 481 AMPASEKLQLLQTAMQAQTEYTVMAITGMAIDNHLLALRELARDLCKEPPEMFMDETYLM 540 Query: 542 SNRFVLSTSQVPTTMEMFCCYGPVVPNGNGACYNPQPEAITFCISSFHSCKETSSVEFAE 601 SNRFVLSTSQVPTTMEMFCCYGPVVPNG GACYNPQPEAITFCISSFHSCKETSSVEFAE Sbjct: 541 SNRFVLSTSQVPTTMEMFCCYGPVVPNGYGACYNPQPEAITFCISSFHSCKETSSVEFAE 600 Query: 602 AVGASLVDMRDLCSSRQPADSKPPAPKEKARGPSQAKQS 640 AVGASLVDMRDLCSSRQPADSKPPAPKEKARGPSQAKQS Sbjct: 601 AVGASLVDMRDLCSSRQPADSKPPAPKEKARGPSQAKQS 639 >2FY4-A nrPDB Length = 612 Score = 1089 bits (2816), Expect = 0.0, Method: Compositional matrix adjust. Identities = 531/611 (86%), Positives = 556/611 (90%), Gaps = 3/611 (0%) Query: 14 KASSWEELDLPKLPVPPLQQTLATYLQCMQHLVPEEQFRKSQAIVKRFGAPGGLGETLQE 73 K S EE LPKLPVPPLQQTLATYLQCM+HLV EEQFRKSQAIV++FGAPGGLGETLQ+ Sbjct: 4 KTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQ 63 Query: 74 KLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFQDTNDQLRFAACLISG 133 KLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHF T+DQLRFAA LISG Sbjct: 64 KLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISG 123 Query: 134 VLSYKTLLDSHSLPTDWAKGQLSGQPLCMKQYYRLFSSYRLPGHTQDTLVAQKSSIMPEP 193 VLSYK LLDSHS+PTD AKGQLSGQPLCMKQYY LFSSYRLPGHTQDTLVAQ SSIMPEP Sbjct: 124 VLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEP 183 Query: 194 EHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEW 253 EHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASN RLPPIGLLTSDGRSEW Sbjct: 184 EHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNAAARLPPIGLLTSDGRSEW 243 Query: 254 AKARTVLLKDSTNRDSLDMIERCICLVCLDGPGTGELSDTHRALQLLHGGGCSLNGANRW 313 A+ARTVL+KDSTNRDSLDMIERCICLVCLD PG ELSDTHRALQLLHGGG S NGANRW Sbjct: 244 AEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGANRW 303 Query: 314 YDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMMTSNKKLVRADSVSELPAPR 373 YDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHM + +LVR+ V LPAPR Sbjct: 304 YDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHM--TQPELVRSPMVP-LPAPR 360 Query: 374 RLRLKCSPETQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKYSPDGFIQVALQL 433 RLR KCSPE QGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQK SPD FIQVALQL Sbjct: 361 RLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVALQL 420 Query: 434 AYYRLYQRLVPTYESASIRRFQEGRVDNIRSATPEALAFVQAMTDHKAAMPASEKLQLLQ 493 A+YRL++RLVPTYESASIRRFQEGRVDNIRSATPEALAFV+A+TDHKAA+PASEKL LL+ Sbjct: 421 AFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLLLLK 480 Query: 494 TAMQAHKQYTVMAITGMAIDNHLLALRELARDLCKEPPEMFMDETYLMSNRFVLSTSQVP 553 A++A YTVMAITGMAIDNHLLALRELAR +C PEMFMDETYLMSNRFVLSTSQVP Sbjct: 481 DAIRAQTAYTVMAITGMAIDNHLLALRELARAMCAALPEMFMDETYLMSNRFVLSTSQVP 540 Query: 554 TTMEMFCCYGPVVPNGNGACYNPQPEAITFCISSFHSCKETSSVEFAEAVGASLVDMRDL 613 TT EMFCCYGPVVPNG GACYNPQPE I FCISSFHSC TSS +FA+AV SL+DMRDL Sbjct: 541 TTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCAATSSSKFAKAVEESLIDMRDL 600 Query: 614 CSSRQPADSKP 624 CS P +SKP Sbjct: 601 CSLLPPTESKP 611 >1T7N-A nrPDB Length = 618 Score = 501 bits (1290), Expect = e-142, Method: Compositional matrix adjust. Identities = 262/601 (43%), Positives = 380/601 (63%), Gaps = 20/601 (3%) Query: 23 LPKLPVPPLQQTLATYLQCMQHLVPEEQFRKSQAIVKRFGAPGGLGETLQEKLLERQEKT 82 LP+LPVPPLQQ+L YL+ +Q +V EE++ ++ +V F GG+GE LQ+ L R +K Sbjct: 27 LPRLPVPPLQQSLDYYLKALQPIVSEEEWAHTKQLVDEFQTSGGVGERLQKGLERRAKKM 86 Query: 83 ANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFQDTNDQLRFAACLISGVLSYKTLLD 142 NW+SE+WL YL R + + SSP VI +Q F D QLRFAA LI GVL +K+++D Sbjct: 87 ENWLSEWWLKTAYLQFRQPVVIYSSPGVILPKQDFVDLQGQLRFAAKLIEGVLDFKSMID 146 Query: 143 SHSLPTDWAKGQLSGQPLCMKQYYRLFSSYRLPGHTQDTLVAQKSSIMPEPEHVIVACCN 202 + +LP ++ L GQPLCM QYY++ SS R+PG QD++V S P P H+ V Sbjct: 147 NETLPVEF----LGGQPLCMNQYYQILSSCRVPGPKQDSVVNFLKSKRP-PTHITVVHNY 201 Query: 203 QFFVLDVV-INFRRLSEGDLFTQLRKI--VKMASNEDERLPPIGLLTSDGRSEWAKARTV 259 QFF LDV + L+ +F QL KI + SN++ P+G+LTS+ R+ WAKA Sbjct: 202 QFFELDVYHSDGTPLTSDQIFVQLEKIWNSSLQSNKE----PVGILTSNHRNTWAKAYNN 257 Query: 260 LLKDSTNRDSLDMIERCICLVCLDGP---GTGELSDTHRALQLLHGGGCSLNGANRWYDK 316 L+KD NR+S++ I++ I VCLD + ++ H A Q+LHGGG N NRW+DK Sbjct: 258 LIKDKVNRESVNSIQKSIFTVCLDKQVPRVSDDVYRNHVAGQMLHGGGSKFNSGNRWFDK 317 Query: 317 SLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMMTSNKKLVRADSVSELPAPRRLR 376 +LQF+V DG+CG+V EH+ +G +V +H++++ T +LVR+ V LP P++LR Sbjct: 318 TLQFIVAEDGSCGMVYEHAAAEGPPIVALVDHVMEY--TKKPELVRSPMVP-LPMPKKLR 374 Query: 377 LKCSPETQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKYSPDGFIQVALQLAYY 436 +PE + + + + L ++++LD ++ F ++GK F K +K SPD FIQVALQLAYY Sbjct: 375 FNITPEIKNDIEKAKQNLSIMIQDLDIMMLTFHHFGKDFPKSEKLSPDAFIQVALQLAYY 434 Query: 437 RLYQRLVPTYESASIRRFQEGRVDNIRSATPEALAFVQAMTDHKAAMPASEKLQLLQTAM 496 R+Y + TYESAS+R F GR D IRSA+ ++LAFV+ M D + +P +K++LL+ A+ Sbjct: 435 RIYGQACATYESASLRMFHLGRTDTIRSASIDSLAFVKGMGD--STVPEQQKVELLRKAV 492 Query: 497 QAHKQYTVMAITGMAIDNHLLALRELARDLCKEPPEMFMDETYLMSNRFVLSTSQVPTTM 556 QAH+ YT AI G A D HLL L+ A + P++FMD +Y ++ F LSTSQVP Sbjct: 493 QAHRAYTDRAIRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFNLSTSQVPAKT 552 Query: 557 EMFCCYGPVVPNGNGACYNPQPEAITFCISSFHSCKETSSVEFAEAVGASLVDMRDLCSS 616 + +GPVVP+G G CYNP I F +S+++SC ET++ A + +L+DMR L + Sbjct: 553 DCVGFFGPVVPDGYGICYNPMEAHINFSVSAYNSCAETNAARMAHYLEKALLDMRTLLQN 612 Query: 617 R 617 Sbjct: 613 H 613 >1S5O-A nrPDB Length = 616 Score = 482 bits (1240), Expect = e-136, Method: Compositional matrix adjust. Identities = 255/589 (43%), Positives = 368/589 (62%), Gaps = 16/589 (2%) Query: 32 QQTLATYLQCMQHLVPEEQFRKSQAIVKRFGAPGGLGETLQEKLLERQEKTANWVSEYWL 91 QQ+L YL+ +Q +V EE++ ++ +V F A GG+GE LQ+ L R KT NW+SE+WL Sbjct: 23 QQSLDHYLKALQPIVSEEEWAHTKQLVDEFQASGGVGERLQKGLERRARKTENWLSEWWL 82 Query: 92 NDMYLNNRLALPVNSSPAVIFARQHFQDTNDQLRFAACLISGVLSYKTLLDSHSLPTDWA 151 YL R + + SSP V+ +Q F D QLRFAA LI GVL +K ++D+ +LP ++ Sbjct: 83 KTAYLQYRQPVVIYSSPGVMLPKQDFVDLQGQLRFAAKLIEGVLDFKVMIDNETLPVEY- 141 Query: 152 KGQLSGQPLCMKQYYRLFSSYRLPGHTQDTLVAQKSSIMPEPEHVIVACCNQFFVLDVV- 210 L G+PLCM QYY++ SS R+PG QDT V+ S P H+ V QFF LDV Sbjct: 142 ---LGGKPLCMNQYYQILSSCRVPGPKQDT-VSNFSKTKKPPTHITVVHNYQFFELDVYH 197 Query: 211 INFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAKARTVLLKDSTNRDSL 270 + L+ +F QL KI + ++ P+G+LTS+ R+ WAKA L+KD NRDS+ Sbjct: 198 SDGTPLTADQIFVQLEKIWNSSLQTNKE--PVGILTSNHRNSWAKAYNTLIKDKVNRDSV 255 Query: 271 DMIERCICLVCLDG--PGTGE-LSDTHRALQLLHGGGCSLNGANRWYDKSLQFVVGRDGT 327 I++ I VCLD P E + +H A Q+LHGGG LN NRW+DK+LQF+V DG+ Sbjct: 256 RSIQKSIFTVCLDATMPRVSEDVYRSHVAGQMLHGGGSRLNSGNRWFDKTLQFIVAEDGS 315 Query: 328 CGVVCEHSPFDGIVLVQCTEHLLKHMMTSNKKLVRADSVSELPAPRRLRLKCSPETQGHL 387 CG+V EH+ +G +V ++++++ T +LVR+ V LP P++LR +PE + + Sbjct: 316 CGLVYEHAAAEGPPIVTLLDYVIEY--TKKPELVRSPMVP-LPMPKKLRFNITPEIKSDI 372 Query: 388 ASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKYSPDGFIQVALQLAYYRLYQRLVPTYE 447 + + L ++++LD V F ++GK F K +K SPD FIQ+ALQLAYYR+Y + TYE Sbjct: 373 EKAKQNLSIMIQDLDITVMVFHHFGKDFPKSEKLSPDAFIQMALQLAYYRIYGQACATYE 432 Query: 448 SASIRRFQEGRVDNIRSATPEALAFVQAMTDHKAAMPASEKLQLLQTAMQAHKQYTVMAI 507 SAS+R F GR D IRSA+ ++L FV+AM D +++ +K++LL+ A+QAH+ YT AI Sbjct: 433 SASLRMFHLGRTDTIRSASMDSLTFVKAMDD--SSVTEHQKVELLRKAVQAHRGYTDRAI 490 Query: 508 TGMAIDNHLLALRELARDLCKEPPEMFMDETYLMSNRFVLSTSQVPTTMEMFCCYGPVVP 567 G A D HLL L+ A + P++FMD +Y ++ F LSTSQVP + +GPVVP Sbjct: 491 RGEAFDRHLLGLKLQAIEDLVSTPDIFMDTSYAIAMHFHLSTSQVPAKTDCVMFFGPVVP 550 Query: 568 NGNGACYNPQPEAITFCISSFHSCKETSSVEFAEAVGASLVDMRDLCSS 616 +G G CYNP I F +S+++SC ET++ A + +L+DMR L S Sbjct: 551 DGYGVCYNPMEAHINFSLSAYNSCAETNAARLAHYLEKALLDMRALLQS 599 >1XMD-A nrPDB Length = 612 Score = 262 bits (670), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 183/604 (30%), Positives = 299/604 (49%), Gaps = 24/604 (3%) Query: 23 LPKLPVPPLQQTLATYLQCMQHLVPEEQFRKSQAIVKRFGAPGGLGETLQEKLLERQEKT 82 LP LPVP L+++L YL+ ++ E++++K++ IV++F G G+ L +KLLER Sbjct: 20 LPSLPVPALEESLKKYLESVKPFANEDEYKKTEEIVQKFQE--GAGKRLHQKLLERARGK 77 Query: 83 ANWVSEYWLNDMYLNNRLALPVNSS---PAVIFARQHFQDTNDQLRFAACLISGVLSYKT 139 NW+ E+WLN YL+ R+ +N + P F QL + ++ L+Y Sbjct: 78 RNWLEEWWLNVAYLDVRIPSQLNVNFVGPCPHFEHYWPAREGTQLERGSMMLWHNLNYWQ 137 Query: 140 LLDSHSLPTDWAKGQLSGQPLCMKQYYRLFSSYRLPGHTQDTLVA--QKSSIMPEPEHVI 197 LL LP + PL M Q+ LFS+ ++PG T+D+++ + S P H+ Sbjct: 138 LLRREKLPVH----KSGNTPLDMNQFRMLFSTCKVPGITRDSIMNYFKTESEGHCPTHIA 193 Query: 198 VACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAKAR 257 V C + FV DV+ ++ +L QL I K SNE P I LTS+ R+ WAKAR Sbjct: 194 VLCRGRAFVFDVLHEGCLITPPELLRQLTYIHKKCSNEPVG-PSIAALTSEERTRWAKAR 252 Query: 258 TVLLK-DSTNRDSLDMIERCICLVCL-DGPGTGELSDTHRALQLLHGGGCSLNGANRWYD 315 L+ D N L+ I+ + + + D + + ++L GG S+ RW D Sbjct: 253 EYLISLDPENLTLLEKIQTSLFVYSIEDSSPHATPEEYSQVFEMLLGGDPSV----RWGD 308 Query: 316 KSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMMTSNKKLVRADSVSELPAPRRL 375 KS + +G G C+H+P+D +V+V ++ + ++ + + ++ V ++P P L Sbjct: 309 KSYNLISFANGIFGCCCDHAPYDAMVVVNIAHYVDERVLETEGRWKGSEKVRDIPLPEEL 368 Query: 376 RLKCSPETQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKYSPDGFIQVALQLAY 435 + ++ + + + +L F ++GK K++ PD FIQ+ALQLAY Sbjct: 369 VFTVDEKILNDVSQAKAQHLKAASDLQIAASTFTSFGKKLTKEEALHPDTFIQLALQLAY 428 Query: 436 YRLYQRLVPTYESASIRRFQEGRVDNIRSATPEALAFVQAMTDHKAAMPASEKLQLLQTA 495 YRL+ R YE+A R F GR + +RS T EA+ + Q+M D A++ E+ Q + A Sbjct: 429 YRLHGRPGCCYETAMTRYFYHGRTETVRSCTVEAVRWCQSMQDPSASL--LERQQKMLEA 486 Query: 496 MQAHKQYTVMAITGMAIDNHLLALRELARDLCKEPPEMFMDETYLMS---NRFVLSTSQV 552 H + G D HLL L +A++ PE+F D + S FVLSTS V Sbjct: 487 FAKHNKMMKDCSHGKGFDRHLLGLLLIAKEEGLPVPELFEDPLFSRSGGGGNFVLSTSLV 546 Query: 553 PTTMEMFCCYGPVVPNGNGACYNPQPEAITFCISSFHSCKETSSVEFAEAVGASLVDMRD 612 + + P+V NG G Y+ + + SS+ SC ET + + + + + DM Sbjct: 547 -GYLRVQGVVVPMVHNGYGFFYHIRDDRFVVACSSWRSCPETDAEKLVQMIFHAFHDMIQ 605 Query: 613 LCSS 616 L ++ Sbjct: 606 LMNT 609 >2FYO-A nrPDB Length = 653 Score = 242 bits (617), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 181/628 (28%), Positives = 291/628 (46%), Gaps = 65/628 (10%) Query: 23 LPKLPVPPLQQTLATYLQCMQHLVPEEQFRKSQAIVKRFGAPGGLGETLQEKLL--ERQE 80 LP+LP+P L+ T+ YL + L+ + QFR+++A+ K F G+G+ L LL ++Q Sbjct: 44 LPRLPIPKLEDTMKRYLNAQKPLLDDSQFRRTEALCKNFET--GVGKELHAHLLAQDKQN 101 Query: 81 KTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFQDTNDQL-----------RFAAC 129 K +++S W DMYL R ++ +N +P + F + NDQL RF Sbjct: 102 KHTSYISGPWF-DMYLTARDSIVLNFNPFMAFNPDPKSEYNDQLTRATNLTVSAVRFLKT 160 Query: 130 LISGVL---------------SYKTLLDSHSLPTDWAKGQL-SGQPLCMKQYYRLFSSYR 173 L +G+L ++K L+ W L + PL M QY+RLF+S R Sbjct: 161 LQAGLLEPEVFHLNPSKSDTDAFKRLIRFVPPSLSWYGAYLVNAYPLDMSQYFRLFNSTR 220 Query: 174 LPGHTQDTLVAQKSSIMPEPEHVIVACCNQFFVLDVVINFRRLSEGDLFT--QLRKIVKM 231 +P +D L + H++V F+V DV+ +G++ +++ +K Sbjct: 221 IPRPNRDELFTDTKA-----RHLLVLRKGHFYVFDVLDQ-----DGNIVNPLEIQAHLKY 270 Query: 232 ASNEDERLP--PIGLLTSDGRSEWAKARTVLLKDSTNRDSLDMIERCICLVCLDGPGTGE 289 ++ +P P+ LTS+ R WA+ R L+ D N ++L ++ + +CLD + Sbjct: 271 ILSDSSPVPEFPVAYLTSENRDVWAELRQKLIFDG-NEETLKKVDSAVFCLCLDDFPMKD 329 Query: 290 LSDTHRALQLLHGGGCSLNGANRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHL 349 L H + +LHG +G NRW+DKS +V DGT V EHS DG+ +++ + Sbjct: 330 L--IHLSHTMLHG-----DGTNRWFDKSFNLIVAEDGTAAVHFEHSWGDGVAVLRFFNEV 382 Query: 350 LKH-----MMTSNKKLVRADSVSELPAPRRLRLKCSPETQGHLASSAEKLQRIVKNLDFI 404 + +T + +S + + L S + + ++ EK VK L Sbjct: 383 FRDSTQTPAITPQSQPAATNSSASV---ETLSFNLSGALKAGITAAKEKFDTTVKTLSID 439 Query: 405 VYKFDNYGKTFIKKQKYSPDGFIQVALQLAYYRLYQRLVPTYESASIRRFQEGRVDNIRS 464 +F GK F+KK++ SPD Q+A Q+A+ R Y + V TYES S F+ GR + IR Sbjct: 440 SIQFQRGGKEFLKKKQLSPDAVAQLAFQMAFLRQYGQTVATYESCSTAAFKHGRTETIRP 499 Query: 465 ATPEALAFVQAMTDHKAAMPASEKLQLLQTAMQAHKQYTVMAITGMAIDNHLLALRELAR 524 A+ +A + E ++ + H Q T A G D HL ALR LA Sbjct: 500 ASIFTKRCSEAFVRDPSKHSVGELQHMMAECSKYHGQLTKEAAMGQGFDRHLYALRYLAT 559 Query: 525 DLCKEPPEMFMDETYLMSNRFVLSTSQVPTTMEMFCCYGPVVPNGNGACYNPQPEAITFC 584 PE+++D Y N +LSTS + + + PVVP+G G Y + I Sbjct: 560 ARGLNLPELYLDPAYQQMNHNILSTSTLNSPAVSLGGFAPVVPDGFGIAYAVHDDWIGCN 619 Query: 585 ISSFHSCKETSSVEFAEAVGASLVDMRD 612 +SS+ ++ EF V L D+ D Sbjct: 620 VSSYSG---RNAREFLHCVQKCLEDIFD 644 >6NZS-A nrPDB Length = 587 Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 4/57 (7%) Query: 440 QRLVPTYESASIRRFQEGRVDNIRSATPEALAF----VQAMTDHKAAMPASEKLQLL 492 +RLVPT ES SI EG V N+ + T E + F +D+ A +P + K L Sbjct: 200 ERLVPTEESGSIHYPAEGEVTNLNAVTEEIIYFKPGTYSMGSDYHAVLPPNVKWVYL 256 >5T4O-G nrPDB Length = 287 Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust. Identities = 17/57 (29%), Positives = 31/57 (54%) Query: 503 TVMAITGMAIDNHLLALRELARDLCKEPPEMFMDETYLMSNRFVLSTSQVPTTMEMF 559 V +TGM + L L + + + E +D+ Y++SN+F+ + SQVPT ++ Sbjct: 133 VVAQVTGMGDNPSLSELIGPVKVMLQAYDEGRLDKLYIVSNKFINTMSQVPTISQLL 189 >1FS0-G nrPDB Length = 230 Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust. Identities = 17/57 (29%), Positives = 31/57 (54%) Query: 503 TVMAITGMAIDNHLLALRELARDLCKEPPEMFMDETYLMSNRFVLSTSQVPTTMEMF 559 V +TGM + L L + + + E +D+ Y++SN+F+ + SQVPT ++ Sbjct: 115 VVAQVTGMGDNPSLSELIGPVKVMLQAYDEGRLDKLYIVSNKFINTMSQVPTISQLL 171 >6JRL-A nrPDB Length = 510 Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 3/72 (4%) Query: 348 HLLKHMMTSNK--KLVRADSVSELPAPRRLRLKCSPETQGHLASSAEKLQRIVKNLDFIV 405 H+ KH+ + + +LV DS EL APR L L C +G + + LQR++ + Sbjct: 377 HVRKHIELAKQFEQLVLKDSRFELVAPRALGLVCF-RPKGDNEITTQLLQRLMDRKKIYM 435 Query: 406 YKFDNYGKTFIK 417 K ++ G+ F++ Sbjct: 436 VKAEHAGRQFLR 447 >3JB9-Y nrPDB Length = 388 Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust. Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 6/98 (6%) Query: 388 ASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKYSPD-GFIQVALQLAYYRLYQRLVPTY 446 S E L R+ K+ DF D +G+ K Y D G + L+ Y + PT Sbjct: 128 GSKCEYLHRLPKDTDFFNANVDCFGRE--KHADYRDDMGGVGSFLRQNYTLYVGGITPTD 185 Query: 447 ESASI--RRFQE-GRVDNIRSATPEALAFVQAMTDHKA 481 + I R F E G ++ IR +AF+ + + A Sbjct: 186 DIEEIVSRHFAEWGDIERIRVLNSRGIAFITYLNEANA 223 >1GPP-A nrPDB Length = 237 Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust. Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 14/107 (13%) Query: 321 VVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMMTSNKKLVRADSVSELPAPRRLRLKCS 380 V+G+DG P + I L + +E + + S + ++DS E+P + + Sbjct: 37 VMGKDG--------RPREVIKLPRGSETMYSVVQKSQHRAHKSDSSREMPELLKFTCNAT 88 Query: 381 PETQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKYSPDGFI 427 E S +L R +K +++ TF QK +PDG I Sbjct: 89 HELVVRTPRSVRRLSRTIKGVEYFEV------ITFEMGQKKAPDGRI 129 >1JVA-A nrPDB Length = 475 Score = 29.3 bits (64), Expect = 6.1, Method: Compositional matrix adjust. Identities = 41/177 (23%), Positives = 69/177 (38%), Gaps = 33/177 (18%) Query: 321 VVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMMTSNKKLVRADSVSELPAPRRLRLKCS 380 V+G+DG P + I L + E + + S + ++DS E+P + + Sbjct: 38 VMGKDG--------RPREVIKLPRGRETMYSVVQKSQHRAHKSDSSREVPELLKFTCNAT 89 Query: 381 PETQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKYSPDGFIQVALQLAYYRLY- 439 E S +L R +K +++ TF QK +PDG I V L + Y Sbjct: 90 NELVVRTPRSVRRLSRTIKGVEYFEV------ITFEMGQKKAPDGRI-VELVKEVSKSYP 142 Query: 440 --------QRLVPTYESASIRRFQEGRVD---------NIRSATPEALAFVQAMTDH 479 LV +Y AS + + E ++ ++R AT + A + DH Sbjct: 143 ISEGPERANELVESYRKASNKAYFEWTIEARDLSLLGSHVRKATYQTYAPILYENDH 199 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1T1U-A nrPDB 1065 0.0 2FY4-A nrPDB 972 0.0 1T7N-A nrPDB 890 0.0 1S5O-A nrPDB 863 0.0 1XMD-A nrPDB 807 0.0 2FYO-A nrPDB 737 0.0 Sequences not found previously or not previously below threshold: 2OTD-A nrPDB 31 1.3 5MPY-A nrPDB 30 2.2 4X0F-A nrPDB 30 2.4 1Y1U-A nrPDB 30 2.4 5IWW-A nrPDB 30 2.8 CONVERGED! >1T1U-A nrPDB Length = 639 Score = 1065 bits (2754), Expect = 0.0, Method: Composition-based stats. Identities = 634/639 (99%), Positives = 635/639 (99%) Query: 2 PILEKAPQKMPVKASSWEELDLPKLPVPPLQQTLATYLQCMQHLVPEEQFRKSQAIVKRF 61 PILEKAPQKMPVKASSWEELDLPKLPVPPLQQTLATYLQCMQHLVPEEQFRKSQAIVKRF Sbjct: 1 PILEKAPQKMPVKASSWEELDLPKLPVPPLQQTLATYLQCMQHLVPEEQFRKSQAIVKRF 60 Query: 62 GAPGGLGETLQEKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFQDTN 121 GAPGGLGETLQEKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFQDTN Sbjct: 61 GAPGGLGETLQEKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFQDTN 120 Query: 122 DQLRFAACLISGVLSYKTLLDSHSLPTDWAKGQLSGQPLCMKQYYRLFSSYRLPGHTQDT 181 DQLRFAACLISGVLSYKTLLDSHSLPTDWAKGQLSGQPLCMKQYYRLFSSYRLPGHTQDT Sbjct: 121 DQLRFAACLISGVLSYKTLLDSHSLPTDWAKGQLSGQPLCMKQYYRLFSSYRLPGHTQDT 180 Query: 182 LVAQKSSIMPEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPP 241 LVAQKSSIMPEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPP Sbjct: 181 LVAQKSSIMPEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPP 240 Query: 242 IGLLTSDGRSEWAKARTVLLKDSTNRDSLDMIERCICLVCLDGPGTGELSDTHRALQLLH 301 IGLLTSDGRSEWAKARTVLLKDSTNRDSLDMIERCICLVCLDGPGTGELSDTHRALQLLH Sbjct: 241 IGLLTSDGRSEWAKARTVLLKDSTNRDSLDMIERCICLVCLDGPGTGELSDTHRALQLLH 300 Query: 302 GGGCSLNGANRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMMTSNKKLV 361 GGGCSLNGANRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMMTSNKKLV Sbjct: 301 GGGCSLNGANRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMMTSNKKLV 360 Query: 362 RADSVSELPAPRRLRLKCSPETQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKY 421 RADSVSELPAPRRLR KCSPETQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKY Sbjct: 361 RADSVSELPAPRRLRWKCSPETQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKY 420 Query: 422 SPDGFIQVALQLAYYRLYQRLVPTYESASIRRFQEGRVDNIRSATPEALAFVQAMTDHKA 481 SPDGFIQVALQLAYYRLYQRLVPTYESASIRRFQEGRVDNIRSATPEALAFVQAMTDHKA Sbjct: 421 SPDGFIQVALQLAYYRLYQRLVPTYESASIRRFQEGRVDNIRSATPEALAFVQAMTDHKA 480 Query: 482 AMPASEKLQLLQTAMQAHKQYTVMAITGMAIDNHLLALRELARDLCKEPPEMFMDETYLM 541 AMPASEKLQLLQTAMQA +YTVMAITGMAIDNHLLALRELARDLCKEPPEMFMDETYLM Sbjct: 481 AMPASEKLQLLQTAMQAQTEYTVMAITGMAIDNHLLALRELARDLCKEPPEMFMDETYLM 540 Query: 542 SNRFVLSTSQVPTTMEMFCCYGPVVPNGNGACYNPQPEAITFCISSFHSCKETSSVEFAE 601 SNRFVLSTSQVPTTMEMFCCYGPVVPNG GACYNPQPEAITFCISSFHSCKETSSVEFAE Sbjct: 541 SNRFVLSTSQVPTTMEMFCCYGPVVPNGYGACYNPQPEAITFCISSFHSCKETSSVEFAE 600 Query: 602 AVGASLVDMRDLCSSRQPADSKPPAPKEKARGPSQAKQS 640 AVGASLVDMRDLCSSRQPADSKPPAPKEKARGPSQAKQS Sbjct: 601 AVGASLVDMRDLCSSRQPADSKPPAPKEKARGPSQAKQS 639 >2FY4-A nrPDB Length = 612 Score = 972 bits (2513), Expect = 0.0, Method: Composition-based stats. Identities = 531/611 (86%), Positives = 556/611 (90%), Gaps = 3/611 (0%) Query: 14 KASSWEELDLPKLPVPPLQQTLATYLQCMQHLVPEEQFRKSQAIVKRFGAPGGLGETLQE 73 K S EE LPKLPVPPLQQTLATYLQCM+HLV EEQFRKSQAIV++FGAPGGLGETLQ+ Sbjct: 4 KTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQ 63 Query: 74 KLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFQDTNDQLRFAACLISG 133 KLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHF T+DQLRFAA LISG Sbjct: 64 KLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISG 123 Query: 134 VLSYKTLLDSHSLPTDWAKGQLSGQPLCMKQYYRLFSSYRLPGHTQDTLVAQKSSIMPEP 193 VLSYK LLDSHS+PTD AKGQLSGQPLCMKQYY LFSSYRLPGHTQDTLVAQ SSIMPEP Sbjct: 124 VLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPEP 183 Query: 194 EHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEW 253 EHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASN RLPPIGLLTSDGRSEW Sbjct: 184 EHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNAAARLPPIGLLTSDGRSEW 243 Query: 254 AKARTVLLKDSTNRDSLDMIERCICLVCLDGPGTGELSDTHRALQLLHGGGCSLNGANRW 313 A+ARTVL+KDSTNRDSLDMIERCICLVCLD PG ELSDTHRALQLLHGGG S NGANRW Sbjct: 244 AEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSDTHRALQLLHGGGYSKNGANRW 303 Query: 314 YDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMMTSNKKLVRADSVSELPAPR 373 YDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHM + +LVR+ V LPAPR Sbjct: 304 YDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHM--TQPELVRSPMVP-LPAPR 360 Query: 374 RLRLKCSPETQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKYSPDGFIQVALQL 433 RLR KCSPE QGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQK SPD FIQVALQL Sbjct: 361 RLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVALQL 420 Query: 434 AYYRLYQRLVPTYESASIRRFQEGRVDNIRSATPEALAFVQAMTDHKAAMPASEKLQLLQ 493 A+YRL++RLVPTYESASIRRFQEGRVDNIRSATPEALAFV+A+TDHKAA+PASEKL LL+ Sbjct: 421 AFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLLLLK 480 Query: 494 TAMQAHKQYTVMAITGMAIDNHLLALRELARDLCKEPPEMFMDETYLMSNRFVLSTSQVP 553 A++A YTVMAITGMAIDNHLLALRELAR +C PEMFMDETYLMSNRFVLSTSQVP Sbjct: 481 DAIRAQTAYTVMAITGMAIDNHLLALRELARAMCAALPEMFMDETYLMSNRFVLSTSQVP 540 Query: 554 TTMEMFCCYGPVVPNGNGACYNPQPEAITFCISSFHSCKETSSVEFAEAVGASLVDMRDL 613 TT EMFCCYGPVVPNG GACYNPQPE I FCISSFHSC TSS +FA+AV SL+DMRDL Sbjct: 541 TTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCAATSSSKFAKAVEESLIDMRDL 600 Query: 614 CSSRQPADSKP 624 CS P +SKP Sbjct: 601 CSLLPPTESKP 611 >1T7N-A nrPDB Length = 618 Score = 890 bits (2299), Expect = 0.0, Method: Composition-based stats. Identities = 262/614 (42%), Positives = 383/614 (62%), Gaps = 16/614 (2%) Query: 11 MPVKASSWEELDLPKLPVPPLQQTLATYLQCMQHLVPEEQFRKSQAIVKRFGAPGGLGET 70 +P + + LP+LPVPPLQQ+L YL+ +Q +V EE++ ++ +V F GG+GE Sbjct: 15 VPRGSHMAHQDALPRLPVPPLQQSLDYYLKALQPIVSEEEWAHTKQLVDEFQTSGGVGER 74 Query: 71 LQEKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFQDTNDQLRFAACL 130 LQ+ L R +K NW+SE+WL YL R + + SSP VI +Q F D QLRFAA L Sbjct: 75 LQKGLERRAKKMENWLSEWWLKTAYLQFRQPVVIYSSPGVILPKQDFVDLQGQLRFAAKL 134 Query: 131 ISGVLSYKTLLDSHSLPTDWAKGQLSGQPLCMKQYYRLFSSYRLPGHTQDTLVAQKSSIM 190 I GVL +K+++D+ +LP ++ L GQPLCM QYY++ SS R+PG QD++V S Sbjct: 135 IEGVLDFKSMIDNETLPVEF----LGGQPLCMNQYYQILSSCRVPGPKQDSVVNFLKSKR 190 Query: 191 PEPEHVIVACCNQFFVLDVVI-NFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDG 249 P P H+ V QFF LDV + L+ +F QL KI + ++ P+G+LTS+ Sbjct: 191 P-PTHITVVHNYQFFELDVYHSDGTPLTSDQIFVQLEKIWNSSLQSNKE--PVGILTSNH 247 Query: 250 RSEWAKARTVLLKDSTNRDSLDMIERCICLVCLDGPG---TGELSDTHRALQLLHGGGCS 306 R+ WAKA L+KD NR+S++ I++ I VCLD + ++ H A Q+LHGGG Sbjct: 248 RNTWAKAYNNLIKDKVNRESVNSIQKSIFTVCLDKQVPRVSDDVYRNHVAGQMLHGGGSK 307 Query: 307 LNGANRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMMTSNKKLVRADSV 366 N NRW+DK+LQF+V DG+CG+V EH+ +G +V +H++++ T +LVR+ V Sbjct: 308 FNSGNRWFDKTLQFIVAEDGSCGMVYEHAAAEGPPIVALVDHVMEY--TKKPELVRSPMV 365 Query: 367 SELPAPRRLRLKCSPETQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKYSPDGF 426 LP P++LR +PE + + + + L ++++LD ++ F ++GK F K +K SPD F Sbjct: 366 P-LPMPKKLRFNITPEIKNDIEKAKQNLSIMIQDLDIMMLTFHHFGKDFPKSEKLSPDAF 424 Query: 427 IQVALQLAYYRLYQRLVPTYESASIRRFQEGRVDNIRSATPEALAFVQAMTDHKAAMPAS 486 IQVALQLAYYR+Y + TYESAS+R F GR D IRSA+ ++LAFV+ M D + +P Sbjct: 425 IQVALQLAYYRIYGQACATYESASLRMFHLGRTDTIRSASIDSLAFVKGMGD--STVPEQ 482 Query: 487 EKLQLLQTAMQAHKQYTVMAITGMAIDNHLLALRELARDLCKEPPEMFMDETYLMSNRFV 546 +K++LL+ A+QAH+ YT AI G A D HLL L+ A + P++FMD +Y ++ F Sbjct: 483 QKVELLRKAVQAHRAYTDRAIRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFN 542 Query: 547 LSTSQVPTTMEMFCCYGPVVPNGNGACYNPQPEAITFCISSFHSCKETSSVEFAEAVGAS 606 LSTSQVP + +GPVVP+G G CYNP I F +S+++SC ET++ A + + Sbjct: 543 LSTSQVPAKTDCVGFFGPVVPDGYGICYNPMEAHINFSVSAYNSCAETNAARMAHYLEKA 602 Query: 607 LVDMRDLCSSRQPA 620 L+DMR L + A Sbjct: 603 LLDMRTLLQNHPRA 616 >1S5O-A nrPDB Length = 616 Score = 863 bits (2229), Expect = 0.0, Method: Composition-based stats. Identities = 254/593 (42%), Positives = 368/593 (62%), Gaps = 16/593 (2%) Query: 32 QQTLATYLQCMQHLVPEEQFRKSQAIVKRFGAPGGLGETLQEKLLERQEKTANWVSEYWL 91 QQ+L YL+ +Q +V EE++ ++ +V F A GG+GE LQ+ L R KT NW+SE+WL Sbjct: 23 QQSLDHYLKALQPIVSEEEWAHTKQLVDEFQASGGVGERLQKGLERRARKTENWLSEWWL 82 Query: 92 NDMYLNNRLALPVNSSPAVIFARQHFQDTNDQLRFAACLISGVLSYKTLLDSHSLPTDWA 151 YL R + + SSP V+ +Q F D QLRFAA LI GVL +K ++D+ +LP + Sbjct: 83 KTAYLQYRQPVVIYSSPGVMLPKQDFVDLQGQLRFAAKLIEGVLDFKVMIDNETLPVE-- 140 Query: 152 KGQLSGQPLCMKQYYRLFSSYRLPGHTQDTLVAQKSSIMPEPEHVIVACCNQFFVLDVVI 211 L G+PLCM QYY++ SS R+PG QDT V+ S P H+ V QFF LDV Sbjct: 141 --YLGGKPLCMNQYYQILSSCRVPGPKQDT-VSNFSKTKKPPTHITVVHNYQFFELDVYH 197 Query: 212 -NFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAKARTVLLKDSTNRDSL 270 + L+ +F QL KI + ++ P+G+LTS+ R+ WAKA L+KD NRDS+ Sbjct: 198 SDGTPLTADQIFVQLEKIWNSSLQTNKE--PVGILTSNHRNSWAKAYNTLIKDKVNRDSV 255 Query: 271 DMIERCICLVCLDGP---GTGELSDTHRALQLLHGGGCSLNGANRWYDKSLQFVVGRDGT 327 I++ I VCLD + ++ +H A Q+LHGGG LN NRW+DK+LQF+V DG+ Sbjct: 256 RSIQKSIFTVCLDATMPRVSEDVYRSHVAGQMLHGGGSRLNSGNRWFDKTLQFIVAEDGS 315 Query: 328 CGVVCEHSPFDGIVLVQCTEHLLKHMMTSNKKLVRADSVSELPAPRRLRLKCSPETQGHL 387 CG+V EH+ +G +V ++++++ T +LVR+ V LP P++LR +PE + + Sbjct: 316 CGLVYEHAAAEGPPIVTLLDYVIEY--TKKPELVRSPMVP-LPMPKKLRFNITPEIKSDI 372 Query: 388 ASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKYSPDGFIQVALQLAYYRLYQRLVPTYE 447 + + L ++++LD V F ++GK F K +K SPD FIQ+ALQLAYYR+Y + TYE Sbjct: 373 EKAKQNLSIMIQDLDITVMVFHHFGKDFPKSEKLSPDAFIQMALQLAYYRIYGQACATYE 432 Query: 448 SASIRRFQEGRVDNIRSATPEALAFVQAMTDHKAAMPASEKLQLLQTAMQAHKQYTVMAI 507 SAS+R F GR D IRSA+ ++L FV+AM D +++ +K++LL+ A+QAH+ YT AI Sbjct: 433 SASLRMFHLGRTDTIRSASMDSLTFVKAMDD--SSVTEHQKVELLRKAVQAHRGYTDRAI 490 Query: 508 TGMAIDNHLLALRELARDLCKEPPEMFMDETYLMSNRFVLSTSQVPTTMEMFCCYGPVVP 567 G A D HLL L+ A + P++FMD +Y ++ F LSTSQVP + +GPVVP Sbjct: 491 RGEAFDRHLLGLKLQAIEDLVSTPDIFMDTSYAIAMHFHLSTSQVPAKTDCVMFFGPVVP 550 Query: 568 NGNGACYNPQPEAITFCISSFHSCKETSSVEFAEAVGASLVDMRDLCSSRQPA 620 +G G CYNP I F +S+++SC ET++ A + +L+DMR L S A Sbjct: 551 DGYGVCYNPMEAHINFSLSAYNSCAETNAARLAHYLEKALLDMRALLQSHPRA 603 >1XMD-A nrPDB Length = 612 Score = 807 bits (2085), Expect = 0.0, Method: Composition-based stats. Identities = 183/604 (30%), Positives = 299/604 (49%), Gaps = 24/604 (3%) Query: 23 LPKLPVPPLQQTLATYLQCMQHLVPEEQFRKSQAIVKRFGAPGGLGETLQEKLLERQEKT 82 LP LPVP L+++L YL+ ++ E++++K++ IV++F G G+ L +KLLER Sbjct: 20 LPSLPVPALEESLKKYLESVKPFANEDEYKKTEEIVQKFQE--GAGKRLHQKLLERARGK 77 Query: 83 ANWVSEYWLNDMYLNNRLALPVNSS---PAVIFARQHFQDTNDQLRFAACLISGVLSYKT 139 NW+ E+WLN YL+ R+ +N + P F QL + ++ L+Y Sbjct: 78 RNWLEEWWLNVAYLDVRIPSQLNVNFVGPCPHFEHYWPAREGTQLERGSMMLWHNLNYWQ 137 Query: 140 LLDSHSLPTDWAKGQLSGQPLCMKQYYRLFSSYRLPGHTQDTLVA--QKSSIMPEPEHVI 197 LL LP + PL M Q+ LFS+ ++PG T+D+++ + S P H+ Sbjct: 138 LLRREKLPVH----KSGNTPLDMNQFRMLFSTCKVPGITRDSIMNYFKTESEGHCPTHIA 193 Query: 198 VACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAKAR 257 V C + FV DV+ ++ +L QL I K SNE P I LTS+ R+ WAKAR Sbjct: 194 VLCRGRAFVFDVLHEGCLITPPELLRQLTYIHKKCSNEPVG-PSIAALTSEERTRWAKAR 252 Query: 258 TVLLK-DSTNRDSLDMIERCICLVCL-DGPGTGELSDTHRALQLLHGGGCSLNGANRWYD 315 L+ D N L+ I+ + + + D + + ++L GG S+ RW D Sbjct: 253 EYLISLDPENLTLLEKIQTSLFVYSIEDSSPHATPEEYSQVFEMLLGGDPSV----RWGD 308 Query: 316 KSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMMTSNKKLVRADSVSELPAPRRL 375 KS + +G G C+H+P+D +V+V ++ + ++ + + ++ V ++P P L Sbjct: 309 KSYNLISFANGIFGCCCDHAPYDAMVVVNIAHYVDERVLETEGRWKGSEKVRDIPLPEEL 368 Query: 376 RLKCSPETQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKYSPDGFIQVALQLAY 435 + ++ + + + +L F ++GK K++ PD FIQ+ALQLAY Sbjct: 369 VFTVDEKILNDVSQAKAQHLKAASDLQIAASTFTSFGKKLTKEEALHPDTFIQLALQLAY 428 Query: 436 YRLYQRLVPTYESASIRRFQEGRVDNIRSATPEALAFVQAMTDHKAAMPASEKLQLLQTA 495 YRL+ R YE+A R F GR + +RS T EA+ + Q+M D A++ E+ Q + A Sbjct: 429 YRLHGRPGCCYETAMTRYFYHGRTETVRSCTVEAVRWCQSMQDPSASL--LERQQKMLEA 486 Query: 496 MQAHKQYTVMAITGMAIDNHLLALRELARDLCKEPPEMFMDETYLMS---NRFVLSTSQV 552 H + G D HLL L +A++ PE+F D + S FVLSTS V Sbjct: 487 FAKHNKMMKDCSHGKGFDRHLLGLLLIAKEEGLPVPELFEDPLFSRSGGGGNFVLSTSLV 546 Query: 553 PTTMEMFCCYGPVVPNGNGACYNPQPEAITFCISSFHSCKETSSVEFAEAVGASLVDMRD 612 + + P+V NG G Y+ + + SS+ SC ET + + + + + DM Sbjct: 547 -GYLRVQGVVVPMVHNGYGFFYHIRDDRFVVACSSWRSCPETDAEKLVQMIFHAFHDMIQ 605 Query: 613 LCSS 616 L ++ Sbjct: 606 LMNT 609 >2FYO-A nrPDB Length = 653 Score = 737 bits (1902), Expect = 0.0, Method: Composition-based stats. Identities = 181/631 (28%), Positives = 291/631 (46%), Gaps = 65/631 (10%) Query: 23 LPKLPVPPLQQTLATYLQCMQHLVPEEQFRKSQAIVKRFGAPGGLGETLQEKLL--ERQE 80 LP+LP+P L+ T+ YL + L+ + QFR+++A+ K F G+G+ L LL ++Q Sbjct: 44 LPRLPIPKLEDTMKRYLNAQKPLLDDSQFRRTEALCKNFET--GVGKELHAHLLAQDKQN 101 Query: 81 KTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFQDTNDQL-----------RFAAC 129 K +++S W DMYL R ++ +N +P + F + NDQL RF Sbjct: 102 KHTSYISGPWF-DMYLTARDSIVLNFNPFMAFNPDPKSEYNDQLTRATNLTVSAVRFLKT 160 Query: 130 LISGVL---------------SYKTLLDSHSLPTDWAKGQL-SGQPLCMKQYYRLFSSYR 173 L +G+L ++K L+ W L + PL M QY+RLF+S R Sbjct: 161 LQAGLLEPEVFHLNPSKSDTDAFKRLIRFVPPSLSWYGAYLVNAYPLDMSQYFRLFNSTR 220 Query: 174 LPGHTQDTLVAQKSSIMPEPEHVIVACCNQFFVLDVVINFRRLSEGDLFT--QLRKIVKM 231 +P +D L + H++V F+V DV+ +G++ +++ +K Sbjct: 221 IPRPNRDELFTDTKA-----RHLLVLRKGHFYVFDVLDQ-----DGNIVNPLEIQAHLKY 270 Query: 232 ASNEDERLP--PIGLLTSDGRSEWAKARTVLLKDSTNRDSLDMIERCICLVCLDGPGTGE 289 ++ +P P+ LTS+ R WA+ R L+ D N ++L ++ + +CLD + Sbjct: 271 ILSDSSPVPEFPVAYLTSENRDVWAELRQKLIFDG-NEETLKKVDSAVFCLCLDDFPMKD 329 Query: 290 LSDTHRALQLLHGGGCSLNGANRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHL 349 L H + +LHG +G NRW+DKS +V DGT V EHS DG+ +++ + Sbjct: 330 L--IHLSHTMLHG-----DGTNRWFDKSFNLIVAEDGTAAVHFEHSWGDGVAVLRFFNEV 382 Query: 350 LKH-----MMTSNKKLVRADSVSELPAPRRLRLKCSPETQGHLASSAEKLQRIVKNLDFI 404 + +T + +S + + L S + + ++ EK VK L Sbjct: 383 FRDSTQTPAITPQSQPAATNSSASV---ETLSFNLSGALKAGITAAKEKFDTTVKTLSID 439 Query: 405 VYKFDNYGKTFIKKQKYSPDGFIQVALQLAYYRLYQRLVPTYESASIRRFQEGRVDNIRS 464 +F GK F+KK++ SPD Q+A Q+A+ R Y + V TYES S F+ GR + IR Sbjct: 440 SIQFQRGGKEFLKKKQLSPDAVAQLAFQMAFLRQYGQTVATYESCSTAAFKHGRTETIRP 499 Query: 465 ATPEALAFVQAMTDHKAAMPASEKLQLLQTAMQAHKQYTVMAITGMAIDNHLLALRELAR 524 A+ +A + E ++ + H Q T A G D HL ALR LA Sbjct: 500 ASIFTKRCSEAFVRDPSKHSVGELQHMMAECSKYHGQLTKEAAMGQGFDRHLYALRYLAT 559 Query: 525 DLCKEPPEMFMDETYLMSNRFVLSTSQVPTTMEMFCCYGPVVPNGNGACYNPQPEAITFC 584 PE+++D Y N +LSTS + + + PVVP+G G Y + I Sbjct: 560 ARGLNLPELYLDPAYQQMNHNILSTSTLNSPAVSLGGFAPVVPDGFGIAYAVHDDWIGCN 619 Query: 585 ISSFHSCKETSSVEFAEAVGASLVDMRDLCS 615 +SS+ ++ EF V L D+ D Sbjct: 620 VSSYSG---RNAREFLHCVQKCLEDIFDALE 647 >2OTD-A nrPDB Length = 247 Score = 31.3 bits (69), Expect = 1.3, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 50/144 (34%), Gaps = 15/144 (10%) Query: 131 ISGVLSYKTLLDSHSLPTDWAKGQLSGQPLCMKQYYRLFSSYRLPGHTQDTLVAQKSSIM 190 ++G L+++ LL + W G+PL + ++ R G + + + Sbjct: 67 VAGELNWQDLLRVDA--GSWYSKAFKGEPLPL--LSQVAERCREHGMMANIEIKPTTGTG 122 Query: 191 PEPEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGR 250 P ++ Q + ++ L + A+ + P GLL + R Sbjct: 123 PLTGKMVALAARQLWA--------GMTPP-LLSSFEIDALEAAQQAAPELPRGLLLDEWR 173 Query: 251 SEWAK--ARTVLLKDSTNRDSLDM 272 +W + AR + N LD Sbjct: 174 DDWRELTARLGCVSIHLNHKLLDK 197 >5MPY-A nrPDB Length = 101 Score = 30.5 bits (67), Expect = 2.2, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 32/79 (40%), Gaps = 2/79 (2%) Query: 21 LDLPKLPVPPLQQTLATYLQCMQHLVPEEQFRKSQAIVKRFGAPGGLGETLQEKLLERQE 80 ++ PK P P Q + TYL + ++ + K G T+ E+ E+ + Sbjct: 9 MEFPKDPAPSRDQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTIDEETSEKFK 68 Query: 81 KTANWVSEYWLNDMYLNNR 99 + + L D Y++ + Sbjct: 69 GLPGVL--WVLPDSYIDVK 85 >4X0F-A nrPDB Length = 655 Score = 30.5 bits (67), Expect = 2.4, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 35/86 (40%), Gaps = 16/86 (18%) Query: 17 SWEELDLPKLPVPPLQQTLATYLQCMQHLVPEEQFRKSQAIVKRFGAPGGLGETLQEKLL 76 +W + +P+ P PPL +EQ R +Q ++++F L E E Sbjct: 569 NWYQAMIPQAPAPPL----------------DEQNRDAQGLMEKFQFELTLDEEDSEGPE 612 Query: 77 ERQEKTANWVSEYWLNDMYLNNRLAL 102 + E + + S L + NR +L Sbjct: 613 KEGEGHSYFSSTKTLAVIDPENRDSL 638 >1Y1U-A nrPDB Length = 585 Score = 30.5 bits (67), Expect = 2.4, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 88/252 (34%), Gaps = 52/252 (20%) Query: 5 EKAPQKMPVKASSWEELDLPKLP------VPPLQQTLATYLQCMQHLVPEE--QFRKSQA 56 E A Q+ V +W + + L Q+TL + ++ +E Q+++ Q Sbjct: 74 ETALQQKQVSLETWLQREAQTLQQYRVELAEKHQKTLQLLRKQQTIILDDELIQWKRRQQ 133 Query: 57 IVKRFGAPGGLGETLQ---EKL----------LERQEKTANWVS-----EYWLNDMYLNN 98 + G P G + LQ EKL + R E + E L ++ Sbjct: 134 LAGNGGPPEGSLDVLQSWCEKLAEIIWQNRQQIRRAEHLCQQLPIPGPVEEMLAEVNATI 193 Query: 99 RLALPVNSSPAVIFARQHFQDTNDQLRFAAC---LISGVLSY-----------------K 138 + + I +Q Q Q +FAA L+ G L+ K Sbjct: 194 TDIISALVTSTFIIEKQPPQVLKTQTKFAATVRLLVGGKLNVHMNPPQVKATIISEQQAK 253 Query: 139 TLLDSHSLPTDWAKGQLSGQPLCMKQYYR----LFSSYRLPGHTQDTLVAQKSSIMPEPE 194 +LL + + + + L+ C+ +Y++ L + +R + ++ + E Sbjct: 254 SLLKNENTRNECSGEILNN--CCVMEYHQATGTLSAHFRNMSLKRIKRADRRGAESVTEE 311 Query: 195 HVIVACCNQFFV 206 V +QF V Sbjct: 312 KFTVLFESQFSV 323 >5IWW-A nrPDB Length = 133 Score = 30.1 bits (66), Expect = 2.8, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 32/79 (40%), Gaps = 2/79 (2%) Query: 21 LDLPKLPVPPLQQTLATYLQCMQHLVPEEQFRKSQAIVKRFGAPGGLGETLQEKLLERQE 80 ++ PK P P Q + TYL + ++ + K G T+ E+ E+ + Sbjct: 21 MEFPKDPAPSRDQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTIDEETSEKFK 80 Query: 81 KTANWVSEYWLNDMYLNNR 99 + + L D Y++ + Sbjct: 81 GLPGVL--WVLPDSYIDVK 97 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.306 0.128 0.336 Lambda K H 0.267 0.0387 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 22,068,443 Number of Sequences: 36641 Number of extensions: 807497 Number of successful extensions: 2172 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 10 Number of HSP's that attempted gapping in prelim test: 2091 Number of HSP's gapped (non-prelim): 28 length of query: 640 length of database: 10,336,785 effective HSP length: 103 effective length of query: 537 effective length of database: 6,562,762 effective search space: 3524203194 effective search space used: 3524203194 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 62 (28.6 bits)