BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= P32610
         (256 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

5BW9-G nrPDB                                                          518   e-148
5KNB-G nrPDB                                                           80   8e-16
5Y5Y-G nrPDB                                                           70   1e-12
1O75-A nrPDB                                                           32   0.34 
5JW6-A nrPDB                                                           30   1.3  
6OKK-S nrPDB                                                           29   1.5  
3JBP-S nrPDB                                                           29   2.4  
4AJW-A nrPDB                                                           27   5.8  
4HKT-A nrPDB                                                           27   7.0  
4RH8-A nrPDB                                                           27   7.8  

>5BW9-G nrPDB
          Length = 256

 Score =  518 bits (1335), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 256/256 (100%), Positives = 256/256 (100%)

Query: 1   MSGNREQVFPTRMTLGLMKTKLKGANQGYSLLKRKSEALTKRFRDITKRIDDAKQKMGRV 60
           MSGNREQVFPTRMTLGLMKTKLKGANQGYSLLKRKSEALTKRFRDITKRIDDAKQKMGRV
Sbjct: 1   MSGNREQVFPTRMTLGLMKTKLKGANQGYSLLKRKSEALTKRFRDITKRIDDAKQKMGRV 60

Query: 61  MQTAAFSLAEVSYATGENIGYQVQESVSTARFKVRARQENVSGVYLSQFESYIDPEINDF 120
           MQTAAFSLAEVSYATGENIGYQVQESVSTARFKVRARQENVSGVYLSQFESYIDPEINDF
Sbjct: 61  MQTAAFSLAEVSYATGENIGYQVQESVSTARFKVRARQENVSGVYLSQFESYIDPEINDF 120

Query: 121 RLTGLGRGGQQVQRAKEIYSRAVETLVELASLQTAFIILDEVIKVTNRRVNAIEHVIIPR 180
           RLTGLGRGGQQVQRAKEIYSRAVETLVELASLQTAFIILDEVIKVTNRRVNAIEHVIIPR
Sbjct: 121 RLTGLGRGGQQVQRAKEIYSRAVETLVELASLQTAFIILDEVIKVTNRRVNAIEHVIIPR 180

Query: 181 TENTIAYINSELDELDREEFYRLKKVQEKKQNETAKLDAEMKLKRDRAEQDASEVAADEE 240
           TENTIAYINSELDELDREEFYRLKKVQEKKQNETAKLDAEMKLKRDRAEQDASEVAADEE
Sbjct: 181 TENTIAYINSELDELDREEFYRLKKVQEKKQNETAKLDAEMKLKRDRAEQDASEVAADEE 240

Query: 241 PQGETLVADQEDDVIF 256
           PQGETLVADQEDDVIF
Sbjct: 241 PQGETLVADQEDDVIF 256


>5KNB-G nrPDB
          Length = 217

 Score = 80.1 bits (196), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 114/211 (54%), Gaps = 10/211 (4%)

Query: 2   SGNREQVFPTRMTLGLMKTKLKGANQGYSLLKRKSEALTKRFRDITKRIDDAKQKMGRVM 61
           SG R  V PTRM L  +K +L  A +G+ LLK K + L ++F  + ++ ++ +Q + +  
Sbjct: 6   SGMRLNVNPTRMELTRLKKQLTTATRGHKLLKDKQDELMRQFILLIRKNNELRQAIEKET 65

Query: 62  QTAA--FSLAE--VSYATGENIGYQVQESVSTARFKVRARQENVSGVYLSQFESYIDPEI 117
           QTA   F LA+  V  A  + +     E+VS     +   ++N+  V +       D  +
Sbjct: 66  QTAMKDFVLAKSTVEEAFIDELLALPAENVS-----ISVVEKNIMSVKVPLMNFQYDETL 120

Query: 118 NDFRLT-GLGRGGQQVQRAKEIYSRAVETLVELASLQTAFIILDEVIKVTNRRVNAIEHV 176
           N+  L  G      ++ R+ + +++ +  L++LA ++    ++ E I+ T RRVNA+E++
Sbjct: 121 NETPLEYGYLHSNAELDRSIDGFTQLLPKLLKLAEVEKTCQLMAEEIEKTRRRVNALEYM 180

Query: 177 IIPRTENTIAYINSELDELDREEFYRLKKVQ 207
            IP+ E TI YI  +L+E +R E  RL KV+
Sbjct: 181 TIPQLEETIYYIKMKLEENERAEVTRLIKVK 211


>5Y5Y-G nrPDB
          Length = 223

 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 21/211 (9%)

Query: 7   QVFPTRMTLGLMKTKLKGANQGYSLLKRKSEALTKRFRDITKRIDDAKQKMGRVMQTAA- 65
           QV PTRM L   + +L+ A +G  LLK+K +AL   F  + +   +A++ + +  + A  
Sbjct: 3   QVSPTRMNLLQRRGQLRLAQKGVDLLKKKRDALVAEFFGLVREAMEARKALDQAAKEAYA 62

Query: 66  -------FSLAEVSYATGENIGYQVQESVSTARFKVRARQENVSGVYLSQFESYIDPEIN 118
                  F   EV    G  +G    E V        A  ENV G  + + ++      +
Sbjct: 63  ALLLAQAFDGPEV--VAGAALGVPPLEGVE-------AEVENVWGSKVPRLKATFP---D 110

Query: 119 DFRLTGLGRGGQQVQRAKEIYSRAVETLVELASLQTAFIILDEVIKVTNRRVNAIEHVII 178
              L+ +G     ++ A   + R  E L+ +A+ +T    + E IK T RRVNA+E V+I
Sbjct: 111 GALLSPVGTPAYTLE-ASRAFRRYAEALIRVANTETRLKKIGEEIKKTTRRVNALEQVVI 169

Query: 179 PRTENTIAYINSELDELDREEFYRLKKVQEK 209
           P     I +I   L++ +RE+ +RLK+++ K
Sbjct: 170 PGIRAQIRFIQQVLEQREREDTFRLKRIKGK 200


>1O75-A nrPDB
          Length = 415

 Score = 31.6 bits (70), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 10/120 (8%)

Query: 82  QVQESVSTARFKVRARQENVSGVYLSQFESYIDPEINDFRLTGLGRGGQQVQRAKEIYSR 141
           Q Q +V     KV ++QE        ++E   DP +   ++       Q +    EI   
Sbjct: 66  QFQYAVEVLGEKVLSKQETEDSRGRKKWEYETDPSVT--KMVRASASFQDLGEDGEIKFE 123

Query: 142 AVETLVELASLQTAFIILDEVIKVTNRRVNAIEHVIIPRTENTIAYINSELDELDREEFY 201
           AVE  V LA   ++F++  E  K+TN +V+ ++ V +         +  EL  + +E+F+
Sbjct: 124 AVEGAVALADRASSFMVDSEEYKITNVKVHGMKFVPVA--------VPHELKGIAKEKFH 175


>5JW6-A nrPDB
          Length = 371

 Score = 29.6 bits (65), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 3/59 (5%)

Query: 143 VETLVELASLQTAFIILDEVIKVTNRRVNAIEHVIIPRTE---NTIAYINSELDELDRE 198
           +  ++  A+LQ  F  ++EV   T + V+   +  +P  +   N I YI+ E D+L+ E
Sbjct: 157 IGVVIPFAALQAKFGPVEEVEVFTEQAVSGAGYPGVPSMDIMDNVIPYISGEEDKLENE 215


>6OKK-S nrPDB
          Length = 156

 Score = 29.3 bits (64), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 10/75 (13%)

Query: 133 QRAKEIYSRAVETLVELASLQTAFIILDEVIKVTNRRVNAIEHVIIPRTENTIAYINSEL 192
           +RA E+ +  ++ +V + S  T F I D  +   NRR +  E          I  I ++L
Sbjct: 56  KRAGELTTEEIDNIVHIMSTPTQFKIPDWFL---NRRKDLKE-------GKNIHVIANQL 105

Query: 193 DELDREEFYRLKKVQ 207
           D   RE+  R+KK++
Sbjct: 106 DSYLREDLERMKKIR 120


>3JBP-S nrPDB
          Length = 128

 Score = 28.9 bits (63), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 10/75 (13%)

Query: 133 QRAKEIYSRAVETLVELASLQTAFIILDEVIKVTNRRVNAIEHVIIPRTENTIAYINSEL 192
           +RA E+ +  ++ +V + S  T F I D  +   NRR +  E          I  I ++L
Sbjct: 45  KRAGELTTEEIDNIVHIMSTPTQFKIPDWFL---NRRKDLKE-------GKNIHVIANQL 94

Query: 193 DELDREEFYRLKKVQ 207
           D   RE+  R+KK++
Sbjct: 95  DSYLREDLERMKKIR 109


>4AJW-A nrPDB
          Length = 934

 Score = 27.3 bits (59), Expect = 5.8,   Method: Composition-based stats.
 Identities = 11/19 (57%), Positives = 14/19 (73%)

Query: 103 GVYLSQFESYIDPEINDFR 121
           G  L +F+S  DPE+NDFR
Sbjct: 13  GKGLHEFDSLRDPEVNDFR 31


>4HKT-A nrPDB
          Length = 331

 Score = 27.3 bits (59), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 12/104 (11%)

Query: 46  ITKRIDDAKQ--KMGRVMQTAAFSLAEVSYATGENIGYQVQESVSTARFKVRARQENVSG 103
           I K I DA     +  ++QTA+   A +S +     GY  +  V  ++  V A  +    
Sbjct: 199 IDKAIGDAGDYDSVSVILQTASGKQAIISNSRRATYGYDQRIEVHGSKGAVAAENQRPVS 258

Query: 104 VYLSQFESYIDPEINDFRLTGLGRGGQQVQRAKEIYSRAVETLV 147
           + ++  + Y  P ++DF +T          R  E Y+  +E+ +
Sbjct: 259 IEIATGDGYTRPPLHDFFMT----------RYTEAYANEIESFI 292


>4RH8-A nrPDB
          Length = 168

 Score = 26.9 bits (58), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 14/117 (11%)

Query: 47  TKRIDDAKQKMGRVMQTAAFSLAEVSYATGENIGYQVQESVSTARFKVRARQENVSGVYL 106
           T R D    ++G+V  + A   A V +  G+   YQ+   + T    V     ++  +  
Sbjct: 49  TTRKDVPSLRLGKV--SIAKDTASV-FRNGQTAEYQM---IMTVNATVLIPGRDIYPISA 102

Query: 107 SQFESYID-PEINDFRLTGLGRGGQQVQRAKEIYSRAVETLV-ELASLQTAFIILDE 161
             F S+ D P++       L +  +Q    KE+Y RA E L+ +L S++ A I  DE
Sbjct: 103 KVFRSFFDNPQM------ALAKDNEQDMIVKEMYDRAAEQLIRKLPSIRAADIRSDE 153


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

5BW9-G nrPDB                                                          340   4e-94
5KNB-G nrPDB                                                          229   8e-61
5Y5Y-G nrPDB                                                          214   3e-56

Sequences not found previously or not previously below threshold:

4UXV-A nrPDB                                                           33   0.10 
5FM1-B nrPDB                                                           31   0.58 
2I1J-A nrPDB                                                           31   0.78 
3R75-A nrPDB                                                           31   0.79 
3WKR-A nrPDB                                                           30   1.0  
6ES9-A nrPDB                                                           28   4.4  
1XZP-A nrPDB                                                           28   4.8  
4KVO-A nrPDB                                                           27   7.5  


CONVERGED!
>5BW9-G nrPDB
          Length = 256

 Score =  340 bits (871), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 256/256 (100%), Positives = 256/256 (100%)

Query: 1   MSGNREQVFPTRMTLGLMKTKLKGANQGYSLLKRKSEALTKRFRDITKRIDDAKQKMGRV 60
           MSGNREQVFPTRMTLGLMKTKLKGANQGYSLLKRKSEALTKRFRDITKRIDDAKQKMGRV
Sbjct: 1   MSGNREQVFPTRMTLGLMKTKLKGANQGYSLLKRKSEALTKRFRDITKRIDDAKQKMGRV 60

Query: 61  MQTAAFSLAEVSYATGENIGYQVQESVSTARFKVRARQENVSGVYLSQFESYIDPEINDF 120
           MQTAAFSLAEVSYATGENIGYQVQESVSTARFKVRARQENVSGVYLSQFESYIDPEINDF
Sbjct: 61  MQTAAFSLAEVSYATGENIGYQVQESVSTARFKVRARQENVSGVYLSQFESYIDPEINDF 120

Query: 121 RLTGLGRGGQQVQRAKEIYSRAVETLVELASLQTAFIILDEVIKVTNRRVNAIEHVIIPR 180
           RLTGLGRGGQQVQRAKEIYSRAVETLVELASLQTAFIILDEVIKVTNRRVNAIEHVIIPR
Sbjct: 121 RLTGLGRGGQQVQRAKEIYSRAVETLVELASLQTAFIILDEVIKVTNRRVNAIEHVIIPR 180

Query: 181 TENTIAYINSELDELDREEFYRLKKVQEKKQNETAKLDAEMKLKRDRAEQDASEVAADEE 240
           TENTIAYINSELDELDREEFYRLKKVQEKKQNETAKLDAEMKLKRDRAEQDASEVAADEE
Sbjct: 181 TENTIAYINSELDELDREEFYRLKKVQEKKQNETAKLDAEMKLKRDRAEQDASEVAADEE 240

Query: 241 PQGETLVADQEDDVIF 256
           PQGETLVADQEDDVIF
Sbjct: 241 PQGETLVADQEDDVIF 256


>5KNB-G nrPDB
          Length = 217

 Score =  229 bits (584), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 66/217 (30%), Positives = 115/217 (52%), Gaps = 10/217 (4%)

Query: 2   SGNREQVFPTRMTLGLMKTKLKGANQGYSLLKRKSEALTKRFRDITKRIDDAKQKMGRVM 61
           SG R  V PTRM L  +K +L  A +G+ LLK K + L ++F  + ++ ++ +Q + +  
Sbjct: 6   SGMRLNVNPTRMELTRLKKQLTTATRGHKLLKDKQDELMRQFILLIRKNNELRQAIEKET 65

Query: 62  QTAA--FSLAE--VSYATGENIGYQVQESVSTARFKVRARQENVSGVYLSQFESYIDPEI 117
           QTA   F LA+  V  A  + +     E+VS     +   ++N+  V +       D  +
Sbjct: 66  QTAMKDFVLAKSTVEEAFIDELLALPAENVS-----ISVVEKNIMSVKVPLMNFQYDETL 120

Query: 118 NDFRLT-GLGRGGQQVQRAKEIYSRAVETLVELASLQTAFIILDEVIKVTNRRVNAIEHV 176
           N+  L  G      ++ R+ + +++ +  L++LA ++    ++ E I+ T RRVNA+E++
Sbjct: 121 NETPLEYGYLHSNAELDRSIDGFTQLLPKLLKLAEVEKTCQLMAEEIEKTRRRVNALEYM 180

Query: 177 IIPRTENTIAYINSELDELDREEFYRLKKVQEKKQNE 213
            IP+ E TI YI  +L+E +R E  RL KV+     E
Sbjct: 181 TIPQLEETIYYIKMKLEENERAEVTRLIKVKNMGTEE 217


>5Y5Y-G nrPDB
          Length = 223

 Score =  214 bits (545), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 21/211 (9%)

Query: 7   QVFPTRMTLGLMKTKLKGANQGYSLLKRKSEALTKRFRDITKRIDDAKQKMGRVMQTAA- 65
           QV PTRM L   + +L+ A +G  LLK+K +AL   F  + +   +A++ + +  + A  
Sbjct: 3   QVSPTRMNLLQRRGQLRLAQKGVDLLKKKRDALVAEFFGLVREAMEARKALDQAAKEAYA 62

Query: 66  -------FSLAEVSYATGENIGYQVQESVSTARFKVRARQENVSGVYLSQFESYIDPEIN 118
                  F   EV    G  +G    E V        A  ENV G  + + ++      +
Sbjct: 63  ALLLAQAFDGPEV--VAGAALGVPPLEGVE-------AEVENVWGSKVPRLKATFP---D 110

Query: 119 DFRLTGLGRGGQQVQRAKEIYSRAVETLVELASLQTAFIILDEVIKVTNRRVNAIEHVII 178
              L+ +G     ++ A   + R  E L+ +A+ +T    + E IK T RRVNA+E V+I
Sbjct: 111 GALLSPVGTPAYTLE-ASRAFRRYAEALIRVANTETRLKKIGEEIKKTTRRVNALEQVVI 169

Query: 179 PRTENTIAYINSELDELDREEFYRLKKVQEK 209
           P     I +I   L++ +RE+ +RLK+++ K
Sbjct: 170 PGIRAQIRFIQQVLEQREREDTFRLKRIKGK 200


>4UXV-A nrPDB
          Length = 545

 Score = 33.2 bits (74), Expect = 0.10,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 74/212 (34%), Gaps = 13/212 (6%)

Query: 20  TKLKGANQGYSLLKRKSEALTKRFRDITKRIDDAKQKMGRVMQTAAFSLAEVSYATGENI 79
            ++     GY  +K K   L      + K +++   ++ R          E+       I
Sbjct: 211 GQIAKLKDGYGEMKEKGYKL--EHIQLDKELENLSNQLKRAEHVLM---TELDIDEASAI 265

Query: 80  GYQVQESVSTARFKVRARQENVSGV--YLSQFESYIDPEINDFRLTGLGRGGQQVQRAKE 137
              + E++ +   ++    E    V   + +     D    +           + +  KE
Sbjct: 266 LQLIDENIQSVYQQLEGEVEAGQSVLSKMPELIIAYDKLKEEKE-----HTKAETELVKE 320

Query: 138 IYSRAVETLVELASLQTAFIILDEVIKVTNRRVNAIEHVIIPRTENTIAYINSELDELDR 197
            Y      L +  + +     + +++     +++A EHV        +A I  +++E+ +
Sbjct: 321 SYRLTAGELGKQQAFEKRLDEIGKLLSSVKDKLDA-EHVAYSLLVEEVASIEKQIEEVKK 379

Query: 198 EEFYRLKKVQEKKQNETAKLDAEMKLKRDRAE 229
           E     + +Q  ++ E    +    LK+  +E
Sbjct: 380 EHAEYRENLQALRKEELQARETLSNLKKTISE 411


>5FM1-B nrPDB
          Length = 846

 Score = 30.9 bits (68), Expect = 0.58,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 47/139 (33%), Gaps = 19/139 (13%)

Query: 75  TGENIGYQVQESVSTARFKVRARQENVSGVYLSQFESYIDPEINDFRLTGLGRGGQQVQR 134
           T + I Y     V         ++      YL  F      + N++           + R
Sbjct: 559 TLDYILYPPLSLVLNVNRPFGRKE------YLRIFNFLWRFKKNNYFYQKEMLKSNDIIR 612

Query: 135 AKEIYSRAVETLVELASLQTAFIILDEVIKVTNRRVNAIEHVIIPRTENTIAYINSELDE 194
           + +        + ++ +  +   IL    +  N ++ +              Y+N  ++E
Sbjct: 613 SFKKIRGYNPLIRDIINKLSRISILRTQFQQFNSKMES-------------YYLNCIIEE 659

Query: 195 LDREEFYRLKKVQEKKQNE 213
             +E   +L++ + K QN+
Sbjct: 660 NFKEMTRKLQRTENKSQNQ 678


>2I1J-A nrPDB
          Length = 575

 Score = 30.5 bits (67), Expect = 0.78,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 54/116 (46%), Gaps = 4/116 (3%)

Query: 130 QQVQRAKEIYSRAVETLVELASLQTAFIILDEVIKVTNRRVNAIEHVIIPRTENTIAYIN 189
           ++++R++     A + ++ L           E ++     + A+    +  T+N  A   
Sbjct: 349 EEMERSQANLLEAQDMILRLEEQLRQLQAAKEELEQRQNELQAMMQ-RLEETKNMEAAER 407

Query: 190 SELDELDR---EEFYRLKKVQEKKQNETAKLDAEMKLKRDRAEQDASEVAADEEPQ 242
            +L++  R   EE  R+++  E K +ET +L  E++  R + ++ A+ + A   PQ
Sbjct: 408 QKLEDEIRAKQEEVSRIQQEVELKDSETRRLQEEVEDARRKQDEAAAALLAATTPQ 463


>3R75-A nrPDB
          Length = 645

 Score = 30.5 bits (67), Expect = 0.79,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 35/105 (33%), Gaps = 4/105 (3%)

Query: 43  FRDITKRIDDAKQKMGRVMQTAAFSLAEVSYATGENIGYQVQESVSTARFKVRARQENVS 102
           F    K  D+    +   ++     +A +  A G+  G  ++E    A  +        +
Sbjct: 237 FLGDRKESDELYMVLDEELK----MMARICPAGGQVTGPHLREMARLAHTEYFIVGHTEA 292

Query: 103 GVYLSQFESYIDPEINDFRLTGLGRGGQQVQRAKEIYSRAVETLV 147
            V     E+   P +    +    R   + +RA   Y   +  L+
Sbjct: 293 DVRDLLRETMFAPTVTGSPIESATRVIARHERAGRGYYSGIAALI 337


>3WKR-A nrPDB
          Length = 416

 Score = 30.2 bits (66), Expect = 1.0,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 9/72 (12%)

Query: 140 SRAVETLVELAS---LQTAFIILDEVIKVTNRRVNAIEHV------IIPRTENTIAYINS 190
           SR +  +  +AS   +       DE +K T   V+ +E +      I P+  + I +   
Sbjct: 294 SRGLPIVTLMASFPHVVERVKKWDEELKKTRYVVDELEKIGFKQLGIKPKEHDLIKFETP 353

Query: 191 ELDELDREEFYR 202
            LDE+ +++  R
Sbjct: 354 VLDEIAKKDKRR 365


>6ES9-A nrPDB
          Length = 551

 Score = 27.8 bits (60), Expect = 4.4,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 55/158 (34%), Gaps = 12/158 (7%)

Query: 19  KTKLKGANQGYSL-LKRKSEALTKRFRDITKRIDDAKQKMGRVMQTAAFSLAEVSYATGE 77
           KT +  A + + + L  +++  T  +R ++  + + +           F    ++    E
Sbjct: 316 KTWITHAQRTHVMTLLARTDPETTDWRGLSMFLAEKEPGTDDDP----FPTPGMTGGEIE 371

Query: 78  NIGYQVQESVSTARFKVRARQENVSGVYLSQFESYIDPEINDFRLTGLGRGGQQVQRAKE 137
            +GY+  +         R + EN+ G    +    +       R+    R     Q A E
Sbjct: 372 VLGYRGMKEYELGFDGFRIKGENLLGGEPGRGFKQLMETFESARIQTAARAVGVAQSAAE 431

Query: 138 IYSRAV-------ETLVELASLQTAFIILDEVIKVTNR 168
           I  R         ++L+E   +     ++   I +  +
Sbjct: 432 IGMRYAVDRKQFGKSLIEFPRVADKLAMMAVEIMIARQ 469


>1XZP-A nrPDB
          Length = 482

 Score = 27.8 bits (60), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 191 ELDELDREEFYRLKKVQEKKQNETAKLDAEMKLKR 225
           E++    E   RL++++EK   E  K DA + L R
Sbjct: 208 EIETNTGEVVTRLERIKEKLTEELKKADAGILLNR 242


>4KVO-A nrPDB
          Length = 731

 Score = 27.1 bits (58), Expect = 7.5,   Method: Composition-based stats.
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 4/42 (9%)

Query: 214 TAKLDAEMKLK---RDRAE-QDASEVAADEEPQGETLVADQE 251
           + +L+   KLK   + RA+ +D   V  DE+P GE LVA  E
Sbjct: 616 SKRLERAEKLKEADKSRAKSEDGMPVKYDEDPLGENLVATSE 657


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.307    0.123    0.287 

Lambda     K      H
   0.267   0.0373    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,989,923
Number of Sequences: 36641
Number of extensions: 219542
Number of successful extensions: 804
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 768
Number of HSP's gapped (non-prelim): 62
length of query: 256
length of database: 10,336,785
effective HSP length: 95
effective length of query: 161
effective length of database: 6,855,890
effective search space: 1103798290
effective search space used: 1103798290
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 58 (27.1 bits)