BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P32605 (298 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5ZWN-S nrPDB 602 e-173 6G90-A nrPDB 557 e-159 6QX9-1A nrPDB 54 1e-07 6AH0-p nrPDB 43 1e-04 2F9J-A nrPDB 34 0.059 2RT3-A nrPDB 32 0.49 4RJW-A nrPDB 31 0.54 3GEE-A nrPDB 30 1.5 4B8R-A nrPDB 30 1.5 2ERR-A nrPDB 29 2.4 2JJD-A nrPDB 28 4.6 1JKF-A nrPDB 27 8.0 5BQN-A nrPDB 27 9.9 >5ZWN-S nrPDB Length = 298 Score = 602 bits (1553), Expect = e-173, Method: Compositional matrix adjust. Identities = 298/298 (100%), Positives = 298/298 (100%) Query: 1 MSALYFQNLPSRPANKENYTRLLLKHINPNNKYAINPSLPLPHNKLQISSQPLMLLDDQM 60 MSALYFQNLPSRPANKENYTRLLLKHINPNNKYAINPSLPLPHNKLQISSQPLMLLDDQM Sbjct: 1 MSALYFQNLPSRPANKENYTRLLLKHINPNNKYAINPSLPLPHNKLQISSQPLMLLDDQM 60 Query: 61 GLLEVSISRSSKMTNQAFLTFVTQEEADRFLEKYTTTALKVQGRKVRMGKARTNSLLGLS 120 GLLEVSISRSSKMTNQAFLTFVTQEEADRFLEKYTTTALKVQGRKVRMGKARTNSLLGLS Sbjct: 61 GLLEVSISRSSKMTNQAFLTFVTQEEADRFLEKYTTTALKVQGRKVRMGKARTNSLLGLS 120 Query: 121 IEMQKKKGNDETYNLDIKKVLKARKLKRKLRSDDICAKKFRLKRQIRRLKHKLRSRKVEE 180 IEMQKKKGNDETYNLDIKKVLKARKLKRKLRSDDICAKKFRLKRQIRRLKHKLRSRKVEE Sbjct: 121 IEMQKKKGNDETYNLDIKKVLKARKLKRKLRSDDICAKKFRLKRQIRRLKHKLRSRKVEE 180 Query: 181 AEIDRIVKEFETRRLENMKSQQENLKQSQKPLKRAKVSNTMENPPNKVLLIQNLPSGTTE 240 AEIDRIVKEFETRRLENMKSQQENLKQSQKPLKRAKVSNTMENPPNKVLLIQNLPSGTTE Sbjct: 181 AEIDRIVKEFETRRLENMKSQQENLKQSQKPLKRAKVSNTMENPPNKVLLIQNLPSGTTE 240 Query: 241 QLLSQILGNEALVEIRLVSVRNLAFVEYETVADATKIKNQLGSTYKLQNNDVTIGFAK 298 QLLSQILGNEALVEIRLVSVRNLAFVEYETVADATKIKNQLGSTYKLQNNDVTIGFAK Sbjct: 241 QLLSQILGNEALVEIRLVSVRNLAFVEYETVADATKIKNQLGSTYKLQNNDVTIGFAK 298 >6G90-A nrPDB Length = 298 Score = 557 bits (1436), Expect = e-159, Method: Compositional matrix adjust. Identities = 278/298 (93%), Positives = 278/298 (93%) Query: 1 MSALYFQNLPSRPANKENYTRLLLKHINPNNKYAINPSLPLPHNKLQISSQPLMLLDDQM 60 MSALYFQNLPSRPANKENYTRLLLKHINPNNKYAINPSLPLPHNKLQISSQPLMLLDDQM Sbjct: 1 MSALYFQNLPSRPANKENYTRLLLKHINPNNKYAINPSLPLPHNKLQISSQPLMLLDDQM 60 Query: 61 GLLEVSISRSSKMTNQAFLTFVTQEEADRFLEKYTTTALKVQGRKVRMGKARTNSLLGLS 120 GLLEVSISRSSKMTNQAFLTFVTQEEADRFLEKYTTTALKVQGRKVRMGKARTNSLLG Sbjct: 61 GLLEVSISRSSKMTNQAFLTFVTQEEADRFLEKYTTTALKVQGRKVRMGKARTNSLLGXX 120 Query: 121 IEMQKKKGNDETYNLDIKKVLKARKLKRKLRSDDICAKKFRLKRQIRRLKHKLRSRKVEE 180 QKKKGNDETY KLRSDDICAKKFRLKRQIRRLKHKLRSRKVEE Sbjct: 121 XXXQKKKGNDETYXXXXXXXXXXXXXXXKLRSDDICAKKFRLKRQIRRLKHKLRSRKVEE 180 Query: 181 AEIDRIVKEFETRRLENMKSQQENLKQSQKPLKRAKVSNTMENPPNKVLLIQNLPSGTTE 240 AEIDRIVKEFETRRLENMKSQQENLKQSQKPLKRAKVSNTMENPPNKVLLIQNLPSGTTE Sbjct: 181 AEIDRIVKEFETRRLENMKSQQENLKQSQKPLKRAKVSNTMENPPNKVLLIQNLPSGTTE 240 Query: 241 QLLSQILGNEALVEIRLVSVRNLAFVEYETVADATKIKNQLGSTYKLQNNDVTIGFAK 298 QLLSQILGNEALVEIRLVSVRNLAFVEYETVADATKIKNQLGSTYKLQNNDVTIGFAK Sbjct: 241 QLLSQILGNEALVEIRLVSVRNLAFVEYETVADATKIKNQLGSTYKLQNNDVTIGFAK 298 >6QX9-1A nrPDB Length = 282 Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 2/79 (2%) Query: 222 ENPPNKVLLIQNLPSGTTEQLLSQILGN-EALVEIRLVSVR-NLAFVEYETVADATKIKN 279 ENPPN +L + NLP T E +LS + E+RLV R ++AFVE++ A ++ Sbjct: 203 ENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFDNEVQAGAARD 262 Query: 280 QLGSTYKLQNNDVTIGFAK 298 L QNN + I FAK Sbjct: 263 ALQGFKITQNNAMKISFAK 281 >6AH0-p nrPDB Length = 225 Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 2/60 (3%) Query: 224 PPNKVLLIQNLPSGTTEQLLSQILGN-EALVEIRLVSVR-NLAFVEYETVADATKIKNQL 281 PPN +L + NLP T E +LS + E+RLV R ++AFVE+E A ++ L Sbjct: 148 PPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHDIAFVEFENDGQAGAARDAL 207 >2F9J-A nrPDB Length = 125 Score = 34.3 bits (77), Expect = 0.059, Method: Compositional matrix adjust. Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 6/66 (9%) Query: 224 PP--NKVLLIQNLPSGTTEQLLSQILGNEALV-EIRLVS---VRNLAFVEYETVADATKI 277 PP N++L+I+NLP T + + I G + +IR+ + R A+V YE + DA Sbjct: 14 PPEVNRILMIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNA 73 Query: 278 KNQLGS 283 + L Sbjct: 74 CDHLSG 79 >2RT3-A nrPDB Length = 97 Score = 31.6 bits (70), Expect = 0.49, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 1/54 (1%) Query: 229 LLIQNLPSGTTEQLLSQILGNEALV-EIRLVSVRNLAFVEYETVADATKIKNQL 281 + + NLP+G TE + + L + +I++V+ RN+AFV + +A A K +L Sbjct: 21 VFLGNLPNGITEDEIREDLEPFGPIDQIKIVTERNIAFVHFLNIAAAIKAVQEL 74 >4RJW-A nrPDB Length = 429 Score = 31.2 bits (69), Expect = 0.54, Method: Compositional matrix adjust. Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 11/75 (14%) Query: 142 KARKLKRKLRSDDICAKKFRLKRQIRRLKHKL----RSRKVEEAEIDRI------VKEFE 191 +A L RKL++DD K + K +L + L R K+E A+ D + + +E Sbjct: 292 QAEYLARKLKADDNAYKDIKAKGYYAQLAYTLTGESRQYKLEGAKFDSVKPENKEIGAWE 351 Query: 192 T-RRLENMKSQQENL 205 R +N+K + +N+ Sbjct: 352 VFYRYDNIKVEDDNV 366 >3GEE-A nrPDB Length = 476 Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust. Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 5/80 (6%) Query: 174 RSR-KVEEAEIDRIVKEFETRRLENMKSQQENLKQSQKPLKRAKVSNTMENPPNKVLLIQ 232 RSR K+ EA++ + + T RL++ ++ LK + K V+N ++ N LI+ Sbjct: 305 RSRMKMAEADLILYLLDLGTERLDDELTEIRELKAAHPAAKFLTVANKLDRAANADALIR 364 Query: 233 NLPSGTTEQLLSQILGNEAL 252 + GT ++++G AL Sbjct: 365 AIADGTG----TEVIGISAL 380 >4B8R-A nrPDB Length = 467 Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust. Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 7/91 (7%) Query: 201 QQENLKQSQKPLKRAKVSNTMENPPNKVLLIQNLPSGTTEQLLSQILGN--EALVEIRLV 258 +++L++ + + KV +ENPP K+ I+ L G L S LG E VE V Sbjct: 48 DKDDLEKRVTEIGKEKVFEIIENPPEKISSIEELLGGI---LRSIKLGKAMEWFVESEEV 104 Query: 259 --SVRNLAFVEYETVADATKIKNQLGSTYKL 287 +R + E A + N LG Y++ Sbjct: 105 RRYLREWGWDELRIGGQAGIMANLLGGVYRI 135 >2ERR-A nrPDB Length = 109 Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust. Identities = 32/97 (32%), Positives = 43/97 (44%), Gaps = 23/97 (23%) Query: 26 HINPNNKYAINPSLPLPHNKLQISSQPLMLLD-------DQMG-LLEVSI---SRSSKMT 74 H+N NK S P +L +S+ P D Q G +L+V I R SK Sbjct: 20 HMNTENK-----SQP---KRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSK-- 69 Query: 75 NQAFLTFVTQEEADRFLEKYTTTALKVQGRKVRMGKA 111 F+TF +ADR EK T V+GRK+ + A Sbjct: 70 GFGFVTFENSADADRAREKLHGTV--VEGRKIEVNNA 104 >2JJD-A nrPDB Length = 599 Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust. Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 2/67 (2%) Query: 166 IRRLKHKLRSRKVEEAEIDRIVKEFETRRLENMKSQQENLKQSQKP--LKRAKVSNTMEN 223 + L+ L++ D+I E E R+L N++ +EN++ P +K+A+V + Sbjct: 299 VSSLEKHLQTMHGTTTHFDKIGLEEEFRKLTNVRIMKENMRTGNLPANMKKARVIQIIPY 358 Query: 224 PPNKVLL 230 N+V+L Sbjct: 359 DFNRVIL 365 >1JKF-A nrPDB Length = 533 Score = 27.3 bits (59), Expect = 8.0, Method: Compositional matrix adjust. Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 10/67 (14%) Query: 101 VQGRKVRMGKARTNSLLG----------LSIEMQKKKGNDETYNLDIKKVLKARKLKRKL 150 + G ++ G+ + S+L +SI GN++ YNL K +++++ + Sbjct: 316 IAGDDLKSGQTKLKSVLAQFLVDAGIKPVSIASYNHLGNNDGYNLSAPKQFRSKEISKSS 375 Query: 151 RSDDICA 157 DDI A Sbjct: 376 VIDDIIA 382 >5BQN-A nrPDB Length = 885 Score = 26.9 bits (58), Expect = 9.9, Method: Compositional matrix adjust. Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 4/43 (9%) Query: 181 AEIDRIVKEFETRRLENMKSQQENLKQSQKPLKRAKVSNTMEN 223 A+ID K++ EN+KSQ ENLK S K+S M N Sbjct: 746 AKIDLEYKKYSGSDKENIKSQVENLKNSLD----VKISEAMNN 784 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5ZWN-S nrPDB 505 e-144 6G90-A nrPDB 471 e-133 6QX9-1A nrPDB 128 2e-30 6AH0-p nrPDB 118 3e-27 Sequences not found previously or not previously below threshold: 2CPD-A nrPDB 44 6e-05 4CQ1-A nrPDB 37 0.009 5ZWN-V nrPDB 35 0.035 2F9J-A nrPDB 35 0.037 2RT3-A nrPDB 35 0.041 2EVZ-A nrPDB 34 0.063 3JB9-Y nrPDB 34 0.11 2ERR-A nrPDB 33 0.15 1QM9-A nrPDB 33 0.15 2JJD-A nrPDB 33 0.19 5BQN-A nrPDB 32 0.22 4PKD-B nrPDB 32 0.35 2CQ3-A nrPDB 32 0.38 5BQM-B nrPDB 32 0.42 6ED3-A nrPDB 32 0.47 4ZKA-A nrPDB 31 0.54 5M6U-B nrPDB 30 0.94 4B8R-A nrPDB 30 1.2 4JEH-A nrPDB 30 1.5 4F3P-A nrPDB 30 1.7 4JWH-A nrPDB 29 2.4 3WDO-A nrPDB 29 3.7 5HM5-A nrPDB 29 4.0 3A4L-A nrPDB 28 4.5 1NYR-A nrPDB 28 6.8 1JLK-A nrPDB 27 7.8 3SXL-A nrPDB 27 8.2 >5ZWN-S nrPDB Length = 298 Score = 505 bits (1301), Expect = e-144, Method: Composition-based stats. Identities = 298/298 (100%), Positives = 298/298 (100%) Query: 1 MSALYFQNLPSRPANKENYTRLLLKHINPNNKYAINPSLPLPHNKLQISSQPLMLLDDQM 60 MSALYFQNLPSRPANKENYTRLLLKHINPNNKYAINPSLPLPHNKLQISSQPLMLLDDQM Sbjct: 1 MSALYFQNLPSRPANKENYTRLLLKHINPNNKYAINPSLPLPHNKLQISSQPLMLLDDQM 60 Query: 61 GLLEVSISRSSKMTNQAFLTFVTQEEADRFLEKYTTTALKVQGRKVRMGKARTNSLLGLS 120 GLLEVSISRSSKMTNQAFLTFVTQEEADRFLEKYTTTALKVQGRKVRMGKARTNSLLGLS Sbjct: 61 GLLEVSISRSSKMTNQAFLTFVTQEEADRFLEKYTTTALKVQGRKVRMGKARTNSLLGLS 120 Query: 121 IEMQKKKGNDETYNLDIKKVLKARKLKRKLRSDDICAKKFRLKRQIRRLKHKLRSRKVEE 180 IEMQKKKGNDETYNLDIKKVLKARKLKRKLRSDDICAKKFRLKRQIRRLKHKLRSRKVEE Sbjct: 121 IEMQKKKGNDETYNLDIKKVLKARKLKRKLRSDDICAKKFRLKRQIRRLKHKLRSRKVEE 180 Query: 181 AEIDRIVKEFETRRLENMKSQQENLKQSQKPLKRAKVSNTMENPPNKVLLIQNLPSGTTE 240 AEIDRIVKEFETRRLENMKSQQENLKQSQKPLKRAKVSNTMENPPNKVLLIQNLPSGTTE Sbjct: 181 AEIDRIVKEFETRRLENMKSQQENLKQSQKPLKRAKVSNTMENPPNKVLLIQNLPSGTTE 240 Query: 241 QLLSQILGNEALVEIRLVSVRNLAFVEYETVADATKIKNQLGSTYKLQNNDVTIGFAK 298 QLLSQILGNEALVEIRLVSVRNLAFVEYETVADATKIKNQLGSTYKLQNNDVTIGFAK Sbjct: 241 QLLSQILGNEALVEIRLVSVRNLAFVEYETVADATKIKNQLGSTYKLQNNDVTIGFAK 298 >6G90-A nrPDB Length = 298 Score = 471 bits (1213), Expect = e-133, Method: Composition-based stats. Identities = 278/298 (93%), Positives = 278/298 (93%) Query: 1 MSALYFQNLPSRPANKENYTRLLLKHINPNNKYAINPSLPLPHNKLQISSQPLMLLDDQM 60 MSALYFQNLPSRPANKENYTRLLLKHINPNNKYAINPSLPLPHNKLQISSQPLMLLDDQM Sbjct: 1 MSALYFQNLPSRPANKENYTRLLLKHINPNNKYAINPSLPLPHNKLQISSQPLMLLDDQM 60 Query: 61 GLLEVSISRSSKMTNQAFLTFVTQEEADRFLEKYTTTALKVQGRKVRMGKARTNSLLGLS 120 GLLEVSISRSSKMTNQAFLTFVTQEEADRFLEKYTTTALKVQGRKVRMGKARTNSLLG Sbjct: 61 GLLEVSISRSSKMTNQAFLTFVTQEEADRFLEKYTTTALKVQGRKVRMGKARTNSLLGXX 120 Query: 121 IEMQKKKGNDETYNLDIKKVLKARKLKRKLRSDDICAKKFRLKRQIRRLKHKLRSRKVEE 180 QKKKGNDETY KLRSDDICAKKFRLKRQIRRLKHKLRSRKVEE Sbjct: 121 XXXQKKKGNDETYXXXXXXXXXXXXXXXKLRSDDICAKKFRLKRQIRRLKHKLRSRKVEE 180 Query: 181 AEIDRIVKEFETRRLENMKSQQENLKQSQKPLKRAKVSNTMENPPNKVLLIQNLPSGTTE 240 AEIDRIVKEFETRRLENMKSQQENLKQSQKPLKRAKVSNTMENPPNKVLLIQNLPSGTTE Sbjct: 181 AEIDRIVKEFETRRLENMKSQQENLKQSQKPLKRAKVSNTMENPPNKVLLIQNLPSGTTE 240 Query: 241 QLLSQILGNEALVEIRLVSVRNLAFVEYETVADATKIKNQLGSTYKLQNNDVTIGFAK 298 QLLSQILGNEALVEIRLVSVRNLAFVEYETVADATKIKNQLGSTYKLQNNDVTIGFAK Sbjct: 241 QLLSQILGNEALVEIRLVSVRNLAFVEYETVADATKIKNQLGSTYKLQNNDVTIGFAK 298 >6QX9-1A nrPDB Length = 282 Score = 128 bits (322), Expect = 2e-30, Method: Composition-based stats. Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 2/79 (2%) Query: 222 ENPPNKVLLIQNLPSGTTEQLLSQILGN-EALVEIRLVSVR-NLAFVEYETVADATKIKN 279 ENPPN +L + NLP T E +LS + E+RLV R ++AFVE++ A ++ Sbjct: 203 ENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFDNEVQAGAARD 262 Query: 280 QLGSTYKLQNNDVTIGFAK 298 L QNN + I FAK Sbjct: 263 ALQGFKITQNNAMKISFAK 281 Score = 31.2 bits (69), Expect = 0.52, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 33/85 (38%), Gaps = 9/85 (10%) Query: 222 ENPPNKVLLIQNLPSGTTEQLLSQ----ILGNEA----LVEIRLVSVRNLAFVEYETVAD 273 E PN + I NL + L + I ++ R + +R AFV ++ V+ Sbjct: 5 ETRPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEVSS 64 Query: 274 ATKIKNQLGSTYKLQNNDVTIGFAK 298 AT + + + I +AK Sbjct: 65 ATNALRSMQGF-PFYDKPMRIQYAK 88 >6AH0-p nrPDB Length = 225 Score = 118 bits (295), Expect = 3e-27, Method: Composition-based stats. Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 2/77 (2%) Query: 224 PPNKVLLIQNLPSGTTEQLLSQILGN-EALVEIRLVSVR-NLAFVEYETVADATKIKNQL 281 PPN +L + NLP T E +LS + E+RLV R ++AFVE+E A ++ L Sbjct: 148 PPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHDIAFVEFENDGQAGAARDAL 207 Query: 282 GSTYKLQNNDVTIGFAK 298 ++ + I +AK Sbjct: 208 QGFKITPSHAMKITYAK 224 Score = 32.0 bits (71), Expect = 0.31, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 35/86 (40%), Gaps = 9/86 (10%) Query: 221 MENPPNKVLLIQNLPSGTTEQLLSQ----ILGNEA----LVEIRLVSVRNLAFVEYETVA 272 M+ PN + I N+ ++ L + + +V ++ + +R AFV ++ + Sbjct: 1 MDIRPNHTIYINNMNDKIKKEELKRSLYALFSQFGHVVDIVALKTMKMRGQAFVIFKELG 60 Query: 273 DATKIKNQLGSTYKLQNNDVTIGFAK 298 +T QL + I +AK Sbjct: 61 SSTNALRQLQGF-PFYGKPMRIQYAK 85 >2CPD-A nrPDB Length = 99 Score = 44.3 bits (103), Expect = 6e-05, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 4/74 (5%) Query: 227 KVLLIQNLPSGTTEQLLSQILGN--EALVEIRLVSVRNLAFVEYETVADATKIKNQLGST 284 K+L ++NL T+E+++ + N VE R+ +R+ AFV + DA + L Sbjct: 16 KILYVRNLMLSTSEEMIEKEFNNIKPGAVE-RVKKIRDYAFVHFSNREDAVEAMKALNG- 73 Query: 285 YKLQNNDVTIGFAK 298 L + + + AK Sbjct: 74 KVLDGSPIEVTLAK 87 >4CQ1-A nrPDB Length = 196 Score = 37.4 bits (85), Expect = 0.009, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 6/94 (6%) Query: 211 PLKRAKV--SNTMEN--PPNKVLLIQNLPSGTTEQLLSQILGNEA--LVEIRLVSVRNLA 264 PL R K S +N PP+ L + N+P E+ L + N + + +A Sbjct: 100 PLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANTGGTVKAFKFFQDHKMA 159 Query: 265 FVEYETVADATKIKNQLGSTYKLQNNDVTIGFAK 298 ++ TV +A + L + +N+ + + F+K Sbjct: 160 LLQMATVEEAIQALIDLHNYNLGENHHLRVSFSK 193 >5ZWN-V nrPDB Length = 523 Score = 35.1 bits (79), Expect = 0.035, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 40/103 (38%), Gaps = 2/103 (1%) Query: 197 NMKSQQENLKQSQKPLKRAKVSNTMENPPNKVLLIQNLPSGTTEQLLSQILGNEA-LVEI 255 NM ++ ++ Q P+++ N +P N + I L S TE L +V + Sbjct: 283 NMGFKRNHMSQFIYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYV 342 Query: 256 RLVSVRNLAFVEYETVADATKIKNQLGSTYKLQNNDVTIGFAK 298 ++ + FV+Y A + N+ V + + + Sbjct: 343 KIPVGKCCGFVQYVDRLSAEAAIAGMQGFPIA-NSRVRLSWGR 384 >2F9J-A nrPDB Length = 125 Score = 35.1 bits (79), Expect = 0.037, Method: Composition-based stats. Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 7/81 (8%) Query: 212 LKRAKVSNTMENPP--NKVLLIQNLPSGTTEQLLSQILGNEA-LVEIRL---VSVRNLAF 265 ++ AK +N + PP N++L+I+NLP T + + I G + +IR+ R A+ Sbjct: 3 MQAAKRAN-IRLPPEVNRILMIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTAY 61 Query: 266 VEYETVADATKIKNQLGSTYK 286 V YE + DA + L Sbjct: 62 VVYEDIFDAKNACDHLSGFNV 82 >2RT3-A nrPDB Length = 97 Score = 35.1 bits (79), Expect = 0.041, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 1/54 (1%) Query: 229 LLIQNLPSGTTEQLLSQILGNEA-LVEIRLVSVRNLAFVEYETVADATKIKNQL 281 + + NLP+G TE + + L + +I++V+ RN+AFV + +A A K +L Sbjct: 21 VFLGNLPNGITEDEIREDLEPFGPIDQIKIVTERNIAFVHFLNIAAAIKAVQEL 74 >2EVZ-A nrPDB Length = 229 Score = 34.3 bits (77), Expect = 0.063, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 46/112 (41%), Gaps = 11/112 (9%) Query: 196 ENMKSQQENLKQSQKPLKRAKV--SNTMEN--PPNKVLLIQNLPSGTTEQLLSQILGN-- 249 E + Q PL R K S +N PP+ L + N+P +E+ L + + Sbjct: 117 EGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDLKVLFSSNG 176 Query: 250 ---EALVEIRLVSVRNLAFVEYETVADATKIKNQLGSTYKLQNNDVTIGFAK 298 + + R +A ++ +V +A + L + +N+ + + F+K Sbjct: 177 GVVKGFKFFQ--KDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSK 226 >3JB9-Y nrPDB Length = 388 Score = 33.5 bits (75), Expect = 0.11, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 35/74 (47%), Gaps = 2/74 (2%) Query: 226 NKVLLIQNL-PSGTTEQLLSQILGNEALVE-IRLVSVRNLAFVEYETVADATKIKNQLGS 283 N L + + P+ E+++S+ +E IR+++ R +AF+ Y A+A K + Sbjct: 173 NYTLYVGGITPTDDIEEIVSRHFAEWGDIERIRVLNSRGIAFITYLNEANAQFAKEAMAH 232 Query: 284 TYKLQNNDVTIGFA 297 + + + +A Sbjct: 233 QSLDHDECLNVRWA 246 >2ERR-A nrPDB Length = 109 Score = 33.1 bits (74), Expect = 0.15, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 10/88 (11%) Query: 214 RAKVSNTMENPPNKVLLIQNLPSGTTEQLLSQILGNEA-LVEIRLV----SVRNLAFVEY 268 R NT K L + N+P + L Q+ G ++++ ++ + FV + Sbjct: 17 RGSHMNTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTF 76 Query: 269 ETVADATKIKNQLGST-----YKLQNND 291 E ADA + + +L T NN Sbjct: 77 ENSADADRAREKLHGTVVEGRKIEVNNA 104 >1QM9-A nrPDB Length = 198 Score = 33.1 bits (74), Expect = 0.15, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 46/112 (41%), Gaps = 11/112 (9%) Query: 196 ENMKSQQENLKQSQKPLKRAKV--SNTMEN--PPNKVLLIQNLPSGTTEQLLSQILGN-- 249 E + Q PL R K S +N PP+ L + N+P +E+ L + + Sbjct: 86 EGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDLKVLFSSNG 145 Query: 250 ---EALVEIRLVSVRNLAFVEYETVADATKIKNQLGSTYKLQNNDVTIGFAK 298 + + R +A ++ +V +A + L + +N+ + + F+K Sbjct: 146 GVVKGFKFFQ--KDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSK 195 >2JJD-A nrPDB Length = 599 Score = 32.8 bits (73), Expect = 0.19, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 15/87 (17%) Query: 166 IRRLKHKLRSRKVEEAEIDRIVKEFETRRLENMKSQQENLKQSQKP--LKRAKVSNTMEN 223 + L+ L++ D+I E E R+L N++ +EN++ P +K+A+V Sbjct: 299 VSSLEKHLQTMHGTTTHFDKIGLEEEFRKLTNVRIMKENMRTGNLPANMKKARV------ 352 Query: 224 PPNKVLLIQNLPSGTTEQLLSQILGNE 250 IQ +P +LS G E Sbjct: 353 -------IQIIPYDFNRVILSMKRGQE 372 >5BQN-A nrPDB Length = 885 Score = 32.4 bits (72), Expect = 0.22, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 11/69 (15%) Query: 180 EAEIDRIVKEFETRRLENMKSQQENLKQSQKPLKRAKVSNTMENPPNKV-------LLIQ 232 +A+ID K++ EN+KSQ ENLK S K+S M N + L Sbjct: 745 KAKIDLEYKKYSGSDKENIKSQVENLKNSLD----VKISEAMNNINKFIRECSVTYLFKN 800 Query: 233 NLPSGTTEQ 241 LP E Sbjct: 801 MLPKVIDEL 809 >4PKD-B nrPDB Length = 279 Score = 32.0 bits (71), Expect = 0.35, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 9/85 (10%) Query: 222 ENPPNKVLLIQNLPSGTTEQLLSQ----ILGNEALVEIRLVS----VRNLAFVEYETVAD 273 E PN + I NL + L + I + LVS +R AFV ++ V+ Sbjct: 4 ETRPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEVSS 63 Query: 274 ATKIKNQLGSTYKLQNNDVTIGFAK 298 AT + + + I +AK Sbjct: 64 ATNALRSMQGF-PFYDKPMRIQYAK 87 >2CQ3-A nrPDB Length = 103 Score = 31.6 bits (70), Expect = 0.38, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 10/73 (13%) Query: 229 LLIQNLPSGTTEQLLSQILGNEA-LVEIRLV----SVRNLAFVEYETVADATKIKNQLGS 283 L + N+P + L Q+ G ++++ ++ + FV +E ADA + + +L Sbjct: 18 LHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHG 77 Query: 284 T-----YKLQNND 291 T NN Sbjct: 78 TVVEGRKIEVNNA 90 >5BQM-B nrPDB Length = 474 Score = 31.6 bits (70), Expect = 0.42, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 11/69 (15%) Query: 180 EAEIDRIVKEFETRRLENMKSQQENLKQSQKPLKRAKVSNTMENPPNKV-------LLIQ 232 +A+ID K++ EN+KSQ ENLK S K+S M N + L Sbjct: 348 KAKIDLEYKKYSGSDKENIKSQVENLKNSLD----VKISEAMNNINKFIRECSVTYLFKN 403 Query: 233 NLPSGTTEQ 241 LP E Sbjct: 404 MLPKVIDEL 412 >6ED3-A nrPDB Length = 848 Score = 31.6 bits (70), Expect = 0.47, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 40/79 (50%), Gaps = 9/79 (11%) Query: 168 RLKHKLRSRKVEEAEIDRIVKEFETRRL----ENMKSQQENLKQSQKPL-----KRAKVS 218 RL+ ++ SR VE E++R+V+ E + E ++ E L + + L K A+++ Sbjct: 401 RLRMEIDSRPVEIDEVERLVRRLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELT 460 Query: 219 NTMENPPNKVLLIQNLPSG 237 +N N + ++++L Sbjct: 461 TRWQNEKNAIEIVRDLKEQ 479 >4ZKA-A nrPDB Length = 100 Score = 31.2 bits (69), Expect = 0.54, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 5/71 (7%) Query: 219 NTMENPPNKVLLIQNLPSGTTEQLLSQILGNEA-LVEIRLV----SVRNLAFVEYETVAD 273 NT K L + N+P + L Q+ G ++++ ++ + FV +E AD Sbjct: 1 NTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSAD 60 Query: 274 ATKIKNQLGST 284 A + + +L T Sbjct: 61 ADRAREKLHGT 71 >5M6U-B nrPDB Length = 724 Score = 30.4 bits (67), Expect = 0.94, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 69/140 (49%), Gaps = 3/140 (2%) Query: 86 EADRFLEKYTTTALKVQGRKVRMGKARTNSLLGLSIEMQKKKGNDETYNLDIKKVLKARK 145 E DR E YT T+ ++Q ++ + +A ++ + Q ++ + Y K+ + Sbjct: 462 EYDRLYEDYTRTSQEIQMKRTAI-EAFNETIKIFEEQCQTQERYSKEYIEKFKREGNETE 520 Query: 146 LKRKLRS-DDICAKKFRLKRQIRRLKHKLRSRKVEEAEIDRIVKEFETRRLENMKSQQEN 204 ++R + + + + ++ + RRL+ L+ + E EID+ + + ++ K++ + Sbjct: 521 IQRIMHNYEKLKSRISEIVDSRRRLEEDLKKQAAEYREIDKRMNSIKPDLIQLRKTRDQY 580 Query: 205 LKQ-SQKPLKRAKVSNTMEN 223 L +QK +++ K++ + N Sbjct: 581 LMWLTQKGVRQKKLNEWLGN 600 >4B8R-A nrPDB Length = 467 Score = 30.1 bits (66), Expect = 1.2, Method: Composition-based stats. Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 7/90 (7%) Query: 202 QENLKQSQKPLKRAKVSNTMENPPNKVLLIQNLPSGTTEQLLSQILGN--EALVEIRLVS 259 +++L++ + + KV +ENPP K+ I+ L G L S LG E VE V Sbjct: 49 KDDLEKRVTEIGKEKVFEIIENPPEKISSIEELLGG---ILRSIKLGKAMEWFVESEEVR 105 Query: 260 --VRNLAFVEYETVADATKIKNQLGSTYKL 287 +R + E A + N LG Y++ Sbjct: 106 RYLREWGWDELRIGGQAGIMANLLGGVYRI 135 >4JEH-A nrPDB Length = 608 Score = 29.7 bits (65), Expect = 1.5, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 31/78 (39%), Gaps = 10/78 (12%) Query: 222 ENPPN------KVLLIQNLPSGTTEQLLSQILGNEALVEIRLVSVRNLAFVEYETVADAT 275 ++PP V + P L ++++ + A I+ ++ N+AF+ YE+ + Sbjct: 106 KDPPTAKYRAAHVFFTDSCPDA----LFNELVKSRAAKVIKTLTEINIAFLPYESQVYSL 161 Query: 276 KIKNQLGSTYKLQNNDVT 293 + S Y + Sbjct: 162 DSADSFQSFYSPHKAQMK 179 >4F3P-A nrPDB Length = 249 Score = 29.7 bits (65), Expect = 1.7, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 50/122 (40%), Gaps = 22/122 (18%) Query: 115 SLLGLSIEMQKKKG---NDETYNLDIKKVLKARKLKRKLRSDDICAKKFRLKRQIRRLKH 171 +L G++I+ +++K +D Y+ + +++A K I L Sbjct: 86 ALSGMTIKEERRKAIDFSDPYYDSGLAAMVQANNTTIK---------------SIDDLNG 130 Query: 172 KLRSRKVEEAEIDRIVKEFETRRLENMKSQQENLKQSQKPLKRAKVSNTMENPPNKVLLI 231 K+ + K A ID I + + + Q N+ Q+ L+ +V M + PN + + Sbjct: 131 KVIAAKTGTATIDWIKAHLKPKEIR----QFPNIDQAYLALEAGRVDAAMHDTPNVLFFV 186 Query: 232 QN 233 N Sbjct: 187 NN 188 >4JWH-A nrPDB Length = 313 Score = 28.9 bits (63), Expect = 2.4, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 25/40 (62%) Query: 144 RKLKRKLRSDDICAKKFRLKRQIRRLKHKLRSRKVEEAEI 183 ++LKR+ D K+ ++R+ +RL+ + R RK+E E+ Sbjct: 47 KRLKRQQEWDAGREKRAEMRREKKRLRKEERKRKIEAGEV 86 >3WDO-A nrPDB Length = 453 Score = 28.5 bits (62), Expect = 3.7, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 217 VSNTMENPPNKVLLIQNLPSG--TTEQLLSQILGNEALVEIRLVSVRNLAFVEYETVA 272 V++TM+ PP L +P+ E L ++L E + E+ + + A+V+ ++ Sbjct: 382 VASTMKEPPYVSSLRIEIPADIAANEALKVRLLETEGVKEVLIAEEEHSAYVKIDSKV 439 >5HM5-A nrPDB Length = 854 Score = 28.5 bits (62), Expect = 4.0, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 6/60 (10%) Query: 82 VTQEEADRFLEKYTTTALKVQG------RKVRMGKARTNSLLGLSIEMQKKKGNDETYNL 135 +T EA+R L++Y + + +G R++ +G A+ +LGL + K+ D Y L Sbjct: 760 LTPAEAERVLKRYGSVSKVQEGATPDELRELGLGDAKIARILGLRSLVNKRLDVDTAYEL 819 >3A4L-A nrPDB Length = 260 Score = 28.1 bits (61), Expect = 4.5, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 4/54 (7%) Query: 142 KARKLKRKLRSDDICAKKF---RLKRQIRRLKHKLRS-RKVEEAEIDRIVKEFE 191 K K RK+ S+ I +KK ++K + K L+ +K+EE + DR++KEF+ Sbjct: 193 KIDKETRKIVSEYIKSKKLDKDKIKEVVELRKEFLKKIKKMEEVDADRVLKEFK 246 >1NYR-A nrPDB Length = 645 Score = 27.8 bits (60), Expect = 6.8, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 2/66 (3%) Query: 182 EIDRIVKEFETRRLENMKSQ--QENLKQSQKPLKRAKVSNTMENPPNKVLLIQNLPSGTT 239 +ID+ + + ++E Q EN+K +K + R + N K+ LI +P Sbjct: 109 DIDQNISSDDFEQIEKTMKQIVNENMKIERKVVSRDEAKELFSNDEYKLELIDAIPEDEN 168 Query: 240 EQLLSQ 245 L SQ Sbjct: 169 VTLYSQ 174 >1JLK-A nrPDB Length = 147 Score = 27.4 bits (59), Expect = 7.8, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 19/34 (55%) Query: 225 PNKVLLIQNLPSGTTEQLLSQILGNEALVEIRLV 258 PN +LL NLP ++L++I N L I +V Sbjct: 62 PNLILLDLNLPKKDGREVLAEIKQNPDLKRIPVV 95 >3SXL-A nrPDB Length = 184 Score = 27.4 bits (59), Expect = 8.2, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 10/79 (12%) Query: 213 KRAKVSNTM---ENPPNKVLLIQNLPSGTTEQLLSQILGNEA-------LVEIRLVSVRN 262 KR KVS E+ + L + NLP T+ L I G L + R Sbjct: 84 KRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRG 143 Query: 263 LAFVEYETVADATKIKNQL 281 +AFV Y +A + + L Sbjct: 144 VAFVRYNKREEAQEAISAL 162 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.314 0.131 0.347 Lambda K H 0.267 0.0407 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,902,403 Number of Sequences: 36641 Number of extensions: 352533 Number of successful extensions: 1375 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 22 Number of HSP's successfully gapped in prelim test: 56 Number of HSP's that attempted gapping in prelim test: 1329 Number of HSP's gapped (non-prelim): 90 length of query: 298 length of database: 10,336,785 effective HSP length: 96 effective length of query: 202 effective length of database: 6,819,249 effective search space: 1377488298 effective search space used: 1377488298 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 59 (27.3 bits)