BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P32602 (292 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1QQE-A nrPDB 595 e-171 3J98-H nrPDB 160 9e-40 2IFU-A nrPDB 47 1e-05 2X1L-A nrPDB 28 3.9 6AF0-A nrPDB 28 5.7 6MSE-U nrPDB 27 7.5 >1QQE-A nrPDB Length = 292 Score = 595 bits (1533), Expect = e-171, Method: Compositional matrix adjust. Identities = 291/292 (99%), Positives = 292/292 (100%) Query: 1 MSDPVELLKRAEKKGVPSSGFMKLFSGSDSYKFEEAADLCVQAATIYRLRKELNLAGDSF 60 +SDPVELLKRAEKKGVPSSGFMKLFSGSDSYKFEEAADLCVQAATIYRLRKELNLAGDSF Sbjct: 1 ISDPVELLKRAEKKGVPSSGFMKLFSGSDSYKFEEAADLCVQAATIYRLRKELNLAGDSF 60 Query: 61 LKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFK 120 LKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFK Sbjct: 61 LKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFK 120 Query: 121 FELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDI 180 FELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDI Sbjct: 121 FELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDI 180 Query: 181 YSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADSRESNF 240 YSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADSRESNF Sbjct: 181 YSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADSRESNF 240 Query: 241 LKSLIDAVNEGDSEQLSEHCKEFDNFMRLDKWKITILNKIKESIQQQEDDLL 292 LKSLIDAVNEGDSEQLSEHCKEFDNFMRLDKWKITILNKIKESIQQQEDDLL Sbjct: 241 LKSLIDAVNEGDSEQLSEHCKEFDNFMRLDKWKITILNKIKESIQQQEDDLL 292 >3J98-H nrPDB Length = 297 Score = 160 bits (404), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 97/273 (35%), Positives = 156/273 (57%), Gaps = 4/273 (1%) Query: 19 SGFMKLFSGSDSYKFEEAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGN 78 S F LF GS K EEA ++ +AA ++++ K + AG++F +AA + ++ +A Sbjct: 28 SFFSGLFGGSS--KIEEACEIYARAANMFKMAKNWSAAGNAFCQAAQLHLQLQSKHDAAT 85 Query: 79 TYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAI 138 +V+A FK + A++ L AI+I+T G+F A + EI E +L D KAI Sbjct: 86 CFVDAGNAFKKA-DPQEAINCLMRAIEIYTDMGRFTIAAKHHISIAEIYETELVDVEKAI 144 Query: 139 DCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSL 198 YE + ++Y ++S + +NKC +K A A QY +A DIY ++ S+M + L ++S Sbjct: 145 AHYEQSADYYKGEESNSSANKCLLKVAGYAAQLEQYQKAIDIYEQVGTSAMDSPLLKYSA 204 Query: 199 KDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADSRESNFLKSLIDAVNEGDSEQLSE 258 KDYF K LC D + A +Q+ + P F+DSRE +K L++A E + + +E Sbjct: 205 KDYFFKAALCHF-CIDMLNAKLAVQKYEELFPAFSDSRECKLMKKLLEAHEEQNVDSYTE 263 Query: 259 HCKEFDNFMRLDKWKITILNKIKESIQQQEDDL 291 KE+D+ RLD+W T+L +IK++IQ E+DL Sbjct: 264 SVKEYDSISRLDQWLTTMLLRIKKTIQGDEEDL 296 >2IFU-A nrPDB Length = 307 Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 69/282 (24%), Positives = 122/282 (43%), Gaps = 14/282 (4%) Query: 1 MSDPVELLKRAEKKGVPSSGFMKLFSGSDSYKFEEAADLCVQAATIYRLRKELNLAGDSF 60 +S+ E + +AEK + FMK DS AA +AA ++ K+L A D++ Sbjct: 7 ISEAHEHIAKAEK--YLKTSFMKWKPDYDS-----AASEYAKAAVAFKNAKQLEQAKDAY 59 Query: 61 LKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFK 120 L+ A+ + A + +A K AV +E A ++ G A Sbjct: 60 LQEAEAHANNRSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMAL 119 Query: 121 FELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDI 180 G+++E D +KA+ Y+ A + ++ + + + K + L ++ EA+ Sbjct: 120 DRAGKLMEP--LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAAS 177 Query: 181 YSKLIKSSMGNRLSQW-SLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADSRESN 239 K + SM + + + + + L QL D VAA + ++E S P F+ S + Sbjct: 178 LQK--EKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESYS-IPGFSGSEDCA 234 Query: 240 FLKSLIDAVNEGDSEQLSEHCK-EFDNFMRLDKWKITILNKI 280 L+ L+ A +E D EQL C+ +M D K+ I K+ Sbjct: 235 ALEDLLQAYDEQDEEQLLRVCRSPLVTYMDNDYAKLAISLKV 276 >2X1L-A nrPDB Length = 524 Score = 28.5 bits (62), Expect = 3.9, Method: Compositional matrix adjust. Identities = 17/62 (27%), Positives = 37/62 (59%), Gaps = 7/62 (11%) Query: 35 EAADLCVQAATIY-RLRKELNLAGDSFLKAADYQKKAGNE------DEAGNTYVEAYKCF 87 AA+L + + ++ RL+++LN++ D F++ +D ++ +AG+ Y++AYK + Sbjct: 75 PAAELARRNSDVFQRLQEKLNISFDRFIRTSDADHYEASKAIWKRMADAGDIYLDAYKGW 134 Query: 88 KS 89 S Sbjct: 135 YS 136 >6AF0-A nrPDB Length = 939 Score = 27.7 bits (60), Expect = 5.7, Method: Compositional matrix adjust. Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%) Query: 101 ENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELA 144 +NA+QIF + + A+ +G I +L ++KAI+ YE+A Sbjct: 757 KNALQIFIKVRETIQDAHVYVNMGHIYA-ELRQFSKAIESYEIA 799 >6MSE-U nrPDB Length = 953 Score = 27.3 bits (59), Expect = 7.5, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 41/94 (43%), Gaps = 20/94 (21%) Query: 103 AIQIFTHRGQFRRGANFKFELGEILE-NDLHDY-----AKAID-----CYELA----GEW 147 A ++F H G F N+ G++ ND +Y AK ID C E A GE Sbjct: 64 ASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPEGEK 123 Query: 148 YAQDQSV-ALSNKCFIKCADLKALDGQYIEASDI 180 DQ + + NK F +C D D +Y +A I Sbjct: 124 KPIDQRLEGIVNKMFQRCLD----DHKYKQAIGI 153 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1QQE-A nrPDB 404 e-113 3J98-H nrPDB 326 8e-90 2IFU-A nrPDB 273 5e-74 Sequences not found previously or not previously below threshold: 6MFV-A nrPDB 33 0.14 3UDT-A nrPDB 32 0.28 5WRW-A nrPDB 31 0.48 6FRK-r nrPDB 31 0.78 6B85-J nrPDB 30 1.3 2PN1-A nrPDB 30 1.4 1IHU-A nrPDB 30 1.5 4KP4-A nrPDB 29 1.8 4TR5-A nrPDB 29 2.2 2OOE-A nrPDB 29 2.8 2YL2-A nrPDB 29 3.1 2OND-A nrPDB 29 3.2 2HPV-A nrPDB 28 4.3 1W3B-A nrPDB 28 4.5 4CQ1-A nrPDB 28 4.7 4I9E-A nrPDB 28 6.4 5BWK-E nrPDB 27 6.5 3W43-A nrPDB 27 9.0 5BW8-C nrPDB 27 9.7 CONVERGED! >1QQE-A nrPDB Length = 292 Score = 404 bits (1039), Expect = e-113, Method: Composition-based stats. Identities = 291/292 (99%), Positives = 292/292 (100%) Query: 1 MSDPVELLKRAEKKGVPSSGFMKLFSGSDSYKFEEAADLCVQAATIYRLRKELNLAGDSF 60 +SDPVELLKRAEKKGVPSSGFMKLFSGSDSYKFEEAADLCVQAATIYRLRKELNLAGDSF Sbjct: 1 ISDPVELLKRAEKKGVPSSGFMKLFSGSDSYKFEEAADLCVQAATIYRLRKELNLAGDSF 60 Query: 61 LKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFK 120 LKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFK Sbjct: 61 LKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFK 120 Query: 121 FELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDI 180 FELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDI Sbjct: 121 FELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDI 180 Query: 181 YSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADSRESNF 240 YSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADSRESNF Sbjct: 181 YSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADSRESNF 240 Query: 241 LKSLIDAVNEGDSEQLSEHCKEFDNFMRLDKWKITILNKIKESIQQQEDDLL 292 LKSLIDAVNEGDSEQLSEHCKEFDNFMRLDKWKITILNKIKESIQQQEDDLL Sbjct: 241 LKSLIDAVNEGDSEQLSEHCKEFDNFMRLDKWKITILNKIKESIQQQEDDLL 292 >3J98-H nrPDB Length = 297 Score = 326 bits (835), Expect = 8e-90, Method: Composition-based stats. Identities = 97/274 (35%), Positives = 156/274 (56%), Gaps = 4/274 (1%) Query: 18 SSGFMKLFSGSDSYKFEEAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAG 77 S F LF GS K EEA ++ +AA ++++ K + AG++F +AA + ++ +A Sbjct: 27 QSFFSGLFGGSS--KIEEACEIYARAANMFKMAKNWSAAGNAFCQAAQLHLQLQSKHDAA 84 Query: 78 NTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKA 137 +V+A FK + A++ L AI+I+T G+F A + EI E +L D KA Sbjct: 85 TCFVDAGNAFKKA-DPQEAINCLMRAIEIYTDMGRFTIAAKHHISIAEIYETELVDVEKA 143 Query: 138 IDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWS 197 I YE + ++Y ++S + +NKC +K A A QY +A DIY ++ S+M + L ++S Sbjct: 144 IAHYEQSADYYKGEESNSSANKCLLKVAGYAAQLEQYQKAIDIYEQVGTSAMDSPLLKYS 203 Query: 198 LKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADSRESNFLKSLIDAVNEGDSEQLS 257 KDYF K LC D + A +Q+ + P F+DSRE +K L++A E + + + Sbjct: 204 AKDYFFKAALCHF-CIDMLNAKLAVQKYEELFPAFSDSRECKLMKKLLEAHEEQNVDSYT 262 Query: 258 EHCKEFDNFMRLDKWKITILNKIKESIQQQEDDL 291 E KE+D+ RLD+W T+L +IK++IQ E+DL Sbjct: 263 ESVKEYDSISRLDQWLTTMLLRIKKTIQGDEEDL 296 >2IFU-A nrPDB Length = 307 Score = 273 bits (698), Expect = 5e-74, Method: Composition-based stats. Identities = 69/282 (24%), Positives = 122/282 (43%), Gaps = 14/282 (4%) Query: 1 MSDPVELLKRAEKKGVPSSGFMKLFSGSDSYKFEEAADLCVQAATIYRLRKELNLAGDSF 60 +S+ E + +AEK + FMK DS AA +AA ++ K+L A D++ Sbjct: 7 ISEAHEHIAKAEK--YLKTSFMKWKPDYDS-----AASEYAKAAVAFKNAKQLEQAKDAY 59 Query: 61 LKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFK 120 L+ A+ + A + +A K AV +E A ++ G A Sbjct: 60 LQEAEAHANNRSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMAL 119 Query: 121 FELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDI 180 G+++E D +KA+ Y+ A + ++ + + + K + L ++ EA+ Sbjct: 120 DRAGKLMEP--LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAAS 177 Query: 181 YSKLIKSSMGNRLSQW-SLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADSRESN 239 K + SM + + + + + L QL D VAA + ++E S P F+ S + Sbjct: 178 LQK--EKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESYS-IPGFSGSEDCA 234 Query: 240 FLKSLIDAVNEGDSEQLSEHCK-EFDNFMRLDKWKITILNKI 280 L+ L+ A +E D EQL C+ +M D K+ I K+ Sbjct: 235 ALEDLLQAYDEQDEEQLLRVCRSPLVTYMDNDYAKLAISLKV 276 >6MFV-A nrPDB Length = 653 Score = 33.2 bits (74), Expect = 0.14, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 50/120 (41%), Gaps = 1/120 (0%) Query: 60 FLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANF 119 + + Y+ N EA + ++ + + G+ L + I+ H G + +G ++ Sbjct: 445 YAEKTKYEYYKENSREALKSALKELEIIRKIGDPEKEGLVLLHVGDIYLHMGNYEKGISY 504 Query: 120 KFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASD 179 E ++ + + + I ELA +Y Q + +++ K A+ + Y A+D Sbjct: 505 YQEALKMAKAYGIKFLEHISYMELAKGYY-QLKLYEKASEYSEKAANYFLMIRNYRRATD 563 >3UDT-A nrPDB Length = 493 Score = 32.1 bits (71), Expect = 0.28, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 41/123 (33%), Gaps = 18/123 (14%) Query: 22 MKLFSGSDSYKFEEAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYV 81 + LFSGS E L +R+ S + + E G + Sbjct: 249 LDLFSGSKERVLEAIKALYSTPQNNFRVFLN-----GSLILGGSGESTGRTSPEIGYAFE 303 Query: 82 EAYKCF---KSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAI 138 +A K F + G + + + +A+ G+ L EI + D D AI Sbjct: 304 DALKGFIQSEDGHRTECFLQLVSDAVY----------GSGVLDRLLEIQKLDKLDIEGAI 353 Query: 139 DCY 141 CY Sbjct: 354 HCY 356 >5WRW-A nrPDB Length = 163 Score = 31.3 bits (69), Expect = 0.48, Method: Composition-based stats. Identities = 18/107 (16%), Positives = 38/107 (35%), Gaps = 3/107 (2%) Query: 88 KSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYEL---A 144 K + + V +L + G F+ N ++L N+ + KA Y L Sbjct: 36 KILQINKDDVTALHCKVVCLIQNGSFKEALNVINTHTKVLANNSLSFEKAYCEYRLNRIE 95 Query: 145 GEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGN 191 + + ++K + +Y E +Y L+++S + Sbjct: 96 NALKTIESANQQTDKLKELYGQVLYRLERYDECLAVYRDLVRNSQDD 142 >6FRK-r nrPDB Length = 605 Score = 30.5 bits (67), Expect = 0.78, Method: Composition-based stats. Identities = 18/107 (16%), Positives = 38/107 (35%), Gaps = 3/107 (2%) Query: 88 KSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYEL---A 144 K + + V +L + G F+ N ++L N+ + KA Y L Sbjct: 36 KILQINKDDVTALHCKVVCLIQNGSFKEALNVINTHTKVLANNSLSFEKAYCEYRLNRIE 95 Query: 145 GEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGN 191 + + ++K + +Y E +Y L+++S + Sbjct: 96 NALKTIESANQQTDKLKELYGQVLYRLERYDECLAVYRDLVRNSQDD 142 >6B85-J nrPDB Length = 223 Score = 30.1 bits (66), Expect = 1.3, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 14/145 (9%) Query: 43 AATIYRLRKELNLAGDSFLKAADYQKKAGNED-EAGNTYVEAYKCFKSGGNSVNAVDSLE 101 +A Y + L + AA+ KKA D ++ + A ++ + Sbjct: 80 SALAYVMLGLLLSLLNRLSLAAEAYKKAIELDPNDALAWLLLGSVLEKLKRLDEAAEAYK 139 Query: 102 NAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCF 161 AI++ + A+ ELG++LE L +A + Y+ A E D A + K Sbjct: 140 KAIELKPND------ASAWKELGKVLE-KLGRLDEAAEAYKKAIEL---DPEDAEAWKEL 189 Query: 162 IKCADLKALDGQYIEASDIYSKLIK 186 K G+ EA++ Y K I+ Sbjct: 190 GKV---LEKLGRLDEAAEAYKKAIE 211 >2PN1-A nrPDB Length = 331 Score = 29.8 bits (65), Expect = 1.4, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 42/113 (37%), Gaps = 15/113 (13%) Query: 193 LSQWSLKDYFLKKGLCQLAA-TDAVAAARTLQEGQSEDPNFADSRESNFLKSLIDAVNEG 251 ++++ +Y L++G+ + L G+ + P F R + + Sbjct: 113 FDKYTMYEYCLRQGIAHARTYATMASFEEALAAGEVQLPVFVKPRNGSASIEVRRVETVE 172 Query: 252 DSEQLSE-----HCKEF--------DNFMRLDKWKIT-ILNKIKESIQQQEDD 290 + EQL +E D ++ L K+T I K K +++ E D Sbjct: 173 EVEQLFSKNTDLIVQELLVGQELGVDAYVDLISGKVTSIFIKEKLTMRAGETD 225 >1IHU-A nrPDB Length = 589 Score = 29.8 bits (65), Expect = 1.5, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 40/120 (33%), Gaps = 8/120 (6%) Query: 138 IDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWS 197 I +L G W + S C A L+ QY A + S + ++ Sbjct: 150 IRLLQLPGAWSSFIDSNPEGASCLGPMAGLEKQREQYAYAVEALS-------DPKRTRLV 202 Query: 198 LKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADSRESNFLKSLIDAVNEGDSEQLS 257 L K L ++A T AA L+ E +L A+ E + E L+ Sbjct: 203 LVARLQKSTLQEVARTHLELAAIGLKNQYLVINGVLPKTE-AANDTLAAAIWEREQEALA 261 >4KP4-A nrPDB Length = 236 Score = 29.4 bits (64), Expect = 1.8, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 46/118 (38%), Gaps = 15/118 (12%) Query: 103 AIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFI 162 A I+ G+ L E+ E+ D + E ++ + + + Sbjct: 34 AETIYNSLGELDLST-----LKELAESINKDIEECNAIIEQFIDY------LRTGQEMPM 82 Query: 163 KCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAAR 220 + ADL A+ G+ I A Y + I++++ + + +K+ + + V AAR Sbjct: 83 EMADLNAVLGEVIAAESGYEREIETALYPGSIEVKMHPLSIKRAVANM----VVNAAR 136 >4TR5-A nrPDB Length = 213 Score = 29.0 bits (63), Expect = 2.2, Method: Composition-based stats. Identities = 9/58 (15%), Positives = 28/58 (48%) Query: 234 DSRESNFLKSLIDAVNEGDSEQLSEHCKEFDNFMRLDKWKITILNKIKESIQQQEDDL 291 +E + + A + ++ + + K F+ ++R ++ K+ +I + I + ++ L Sbjct: 25 GEKEYKAWEKKLRANEKELVKEYTANAKPFNTYLRANEGKLGFKPEIDKKILKLDEAL 82 >2OOE-A nrPDB Length = 530 Score = 29.0 bits (63), Expect = 2.8, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 22/53 (41%) Query: 147 WYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLK 199 WY Q + S+K + D+ EA++IY + I + + + + Sbjct: 275 WYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAY 327 Score = 28.6 bits (62), Expect = 3.1, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 22/67 (32%), Gaps = 7/67 (10%) Query: 95 NAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAK-------AIDCYELAGEW 147 A LE + ++ +G F E I E + K A YE + Sbjct: 277 EAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMK 336 Query: 148 YAQDQSV 154 Y + S+ Sbjct: 337 YEKVHSI 343 >2YL2-A nrPDB Length = 540 Score = 28.6 bits (62), Expect = 3.1, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 5/69 (7%) Query: 68 KKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEIL 127 AG E ++ + CF G N A+ ++ A++ + RG FR + ++L Sbjct: 467 AAAGGLHEFADS--QFGHCFSWGENREEAISNMVVALKELSIRGDFRTTVEYLI---KLL 521 Query: 128 ENDLHDYAK 136 E + + Sbjct: 522 ETESFQMNR 530 >2OND-A nrPDB Length = 308 Score = 28.6 bits (62), Expect = 3.2, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 22/53 (41%) Query: 147 WYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLK 199 WY Q + S+K + D+ EA++IY + I + + + + Sbjct: 53 WYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAY 105 Score = 28.6 bits (62), Expect = 3.7, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 22/67 (32%), Gaps = 7/67 (10%) Query: 95 NAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAK-------AIDCYELAGEW 147 A LE + ++ +G F E I E + K A YE + Sbjct: 55 EAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMK 114 Query: 148 YAQDQSV 154 Y + S+ Sbjct: 115 YEKVHSI 121 >2HPV-A nrPDB Length = 208 Score = 28.2 bits (61), Expect = 4.3, Method: Composition-based stats. Identities = 26/205 (12%), Positives = 61/205 (29%), Gaps = 4/205 (1%) Query: 1 MSDPVELLKRAEKKGVPSSGFMKLFSGSDSYKFEEAADLCVQAATIYRLRKELNLAGDSF 60 + L K + F+ + ++ E D+ + + +EL A + Sbjct: 6 VVKAHPLTKEESRSVRALETFLASYRETNPSDEIEILDVYAPETNMPEIDEELLSAWGAL 65 Query: 61 LKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSV--NAVDSLENAIQIFTHRGQFRRGAN 118 A ++ + N+ + + E F S V N + +L ++ Sbjct: 66 RAGAAFETLSENQQQKVARFNELTDQFLSADKVVIANPMWNLNVPTRLKAWVDTINVAGK 125 Query: 119 FKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEAS 178 E K + G +Y + K + + +DG +IE Sbjct: 126 TFQYTAE--GPKPLTSGKKALHIQSNGGFYEGKDFASQYIKAILNFIGVDQVDGLFIEGI 183 Query: 179 DIYSKLIKSSMGNRLSQWSLKDYFL 203 D + + + +++ + Sbjct: 184 DHFPDRAEELLNTAMTKATEYGKTF 208 >1W3B-A nrPDB Length = 388 Score = 28.2 bits (61), Expect = 4.5, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 40/108 (37%), Gaps = 16/108 (14%) Query: 58 DSFLKAADYQKKAGNEDEAGNTYVEA--------------YKCFKSGGNSVNAVDSLENA 103 D++ A+ K+ G+ EA + Y A + GN AV A Sbjct: 272 DAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 331 Query: 104 IQIFTHRGQFRRG-ANFKFELGEILENDLHDYAKAIDCYELAGEWYAQ 150 +++F A+ + G++ E +H Y +AI + Y+ Sbjct: 332 LEVFPEFAAAHSNLASVLQQQGKLQEALMH-YKEAIRISPTFADAYSN 378 >4CQ1-A nrPDB Length = 196 Score = 28.2 bits (61), Expect = 4.7, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 44/112 (39%), Gaps = 5/112 (4%) Query: 13 KKGVPSSGFMKLFSGSDSYKFEEAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGN 72 ++G+ G K F S ++F++ Q I+ L+L+ + + ++ Sbjct: 84 REGLDDQGLTKDFGNSPLHRFKKPGSKNFQ--NIFPPSATLHLSN---IPPSVAEEDLRT 138 Query: 73 EDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELG 124 V+A+K F+ ++ + ++E AIQ + G N + Sbjct: 139 LFANTGGTVKAFKFFQDHKMALLQMATVEEAIQALIDLHNYNLGENHHLRVS 190 >4I9E-A nrPDB Length = 383 Score = 27.8 bits (60), Expect = 6.4, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 53/159 (33%), Gaps = 1/159 (0%) Query: 46 IYRLRKELNLAGDSFLKAADYQKK-AGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAI 104 +Y L + L+ F K A+ + + E + + + + + ++D A Sbjct: 111 MYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAY 170 Query: 105 QIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKC 164 +I+ + L DL Y AI ++ A ++ L + Sbjct: 171 EIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNI 230 Query: 165 ADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFL 203 K QY +A + + I + + + YFL Sbjct: 231 GLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFL 269 >5BWK-E nrPDB Length = 319 Score = 27.4 bits (59), Expect = 6.5, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 40/101 (39%), Gaps = 8/101 (7%) Query: 134 YAKAIDCYE---LAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMG 190 AK + +E AG++Y Q++ +++ + + + + K + G Sbjct: 5 LAKTLQRFENKIKAGDYYEAHQTLRTIANRYVRSKSYEHAIELISQGALSFLKAKQGGSG 64 Query: 191 NRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPN 231 L + L+ Y L + D ++ AR ++ DP+ Sbjct: 65 TDLIFYLLEVYDLAEV-----KVDDISVARLVRLIAELDPS 100 >3W43-A nrPDB Length = 199 Score = 27.1 bits (58), Expect = 9.0, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 19/46 (41%), Gaps = 3/46 (6%) Query: 235 SRESNFLKSLIDAVNEGDSEQLSEHCKEFDNFMRLDKWKITILNKI 280 + S +K L++ D E + E C + M+ + + KI Sbjct: 53 NESSAAIKDLVENYASEDVESIIERCNQ---AMKNKRGATASILKI 95 >5BW8-C nrPDB Length = 305 Score = 27.1 bits (58), Expect = 9.7, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 40/101 (39%), Gaps = 8/101 (7%) Query: 134 YAKAIDCYE---LAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMG 190 AK + +E AG++Y Q++ +++ + + + + K + G Sbjct: 13 LAKTLQRFENKIKAGDYYEAHQTLRTIANRYVRSKSYEHAIELISQGALSFLKAKQGGSG 72 Query: 191 NRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPN 231 L + L+ Y L + D ++ AR ++ DP+ Sbjct: 73 TDLIFYLLEVYDLAEV-----KVDDISVARLVRLIAELDPS 108 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.311 0.124 0.292 Lambda K H 0.267 0.0377 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,851,460 Number of Sequences: 36641 Number of extensions: 303228 Number of successful extensions: 905 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 31 Number of HSP's that attempted gapping in prelim test: 868 Number of HSP's gapped (non-prelim): 47 length of query: 292 length of database: 10,336,785 effective HSP length: 96 effective length of query: 196 effective length of database: 6,819,249 effective search space: 1336572804 effective search space used: 1336572804 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 58 (27.1 bits)