BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P32529 (125 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5M3F-I nrPDB 258 4e-70 3QT1-I nrPDB 47 2e-06 6CNB-I nrPDB 46 4e-06 1PQV-S nrPDB 44 2e-05 3GTM-S nrPDB 42 5e-05 5IY6-U nrPDB 39 8e-04 5X51-I nrPDB 34 0.015 3H0G-I nrPDB 34 0.019 5XON-U nrPDB 32 0.050 2R92-I nrPDB 31 0.12 4CFG-A nrPDB 27 1.9 2E9H-A nrPDB 27 2.3 2G2K-A nrPDB 27 2.4 4O1E-A nrPDB 27 2.7 6GMH-I nrPDB 26 4.8 3TSR-E nrPDB 26 5.0 5AH5-A nrPDB 26 5.3 4PEQ-B nrPDB 25 9.1 >5M3F-I nrPDB Length = 125 Score = 258 bits (659), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 125/125 (100%), Positives = 125/125 (100%) Query: 1 MSVVGSLIFCLDCGDLLENPNAVLGSNVECSQCKAIYPKSQFSNLKVVTTTADDAFPSSL 60 MSVVGSLIFCLDCGDLLENPNAVLGSNVECSQCKAIYPKSQFSNLKVVTTTADDAFPSSL Sbjct: 1 MSVVGSLIFCLDCGDLLENPNAVLGSNVECSQCKAIYPKSQFSNLKVVTTTADDAFPSSL 60 Query: 61 RAKKSVVKTSLKKNELKDGATIKEKCPQCGNEEMNYHTLQLRSADEGATVFYTCTSCGYK 120 RAKKSVVKTSLKKNELKDGATIKEKCPQCGNEEMNYHTLQLRSADEGATVFYTCTSCGYK Sbjct: 61 RAKKSVVKTSLKKNELKDGATIKEKCPQCGNEEMNYHTLQLRSADEGATVFYTCTSCGYK 120 Query: 121 FRTNN 125 FRTNN Sbjct: 121 FRTNN 125 >3QT1-I nrPDB Length = 133 Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 18/40 (45%), Positives = 28/40 (70%) Query: 85 KCPQCGNEEMNYHTLQLRSADEGATVFYTCTSCGYKFRTN 124 +CP+C + E + LQ+RSADE T FY C +CG++++ N Sbjct: 94 ECPKCHSRENVFFQLQIRSADEPMTTFYKCVNCGHRWKEN 133 >6CNB-I nrPDB Length = 110 Score = 45.8 bits (107), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 3/45 (6%) Query: 83 KEKCPQ---CGNEEMNYHTLQLRSADEGATVFYTCTSCGYKFRTN 124 K +CP CG E + LQ+RSADE T FY C +CG++++ N Sbjct: 66 KTQCPNYDTCGGESAYFFQLQIRSADEPMTTFYKCVNCGHRWKEN 110 >1PQV-S nrPDB Length = 309 Score = 43.5 bits (101), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 10/83 (12%) Query: 47 VVTTTADDAFPSSLRAK-KSVVKTSLKKNELKDGATIKEK------CPQCGNEEMNYHTL 99 + T A D P+ L+ K + + K +L + GATI+ C +C ++++Y+ L Sbjct: 228 LATCDAKDLAPAPLKQKIEEIAKQNLYNAQ---GATIERSVTDRFTCGKCKEKKVSYYQL 284 Query: 100 QLRSADEGATVFYTCTSCGYKFR 122 Q RSADE T F TC +CG +++ Sbjct: 285 QTRSADEPLTTFCTCEACGNRWK 307 >3GTM-S nrPDB Length = 173 Score = 42.4 bits (98), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 10/83 (12%) Query: 47 VVTTTADDAFPSSLRAK-KSVVKTSLKKNELKDGATIKEK------CPQCGNEEMNYHTL 99 + T A D P+ L+ K + + K +L + GATI+ C +C ++++Y+ L Sbjct: 92 LATCDAKDLAPAPLKQKIEEIAKQNLYNAQ---GATIERSVTDRFTCGKCKEKKVSYYQL 148 Query: 100 QLRSADEGATVFYTCTSCGYKFR 122 Q RSAD T F TC +CG +++ Sbjct: 149 QTRSADHPLTTFCTCEACGNRWK 171 >5IY6-U nrPDB Length = 301 Score = 38.5 bits (88), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 15/108 (13%) Query: 19 NPNAVLGSNVECSQCKAIYPKSQFSNLKVVTTTADDAFPSSLRA-KKSVVKTSLKKNEL- 76 NPN L NV C P F+ + TA++ L+ +K++ K +++++++ Sbjct: 203 NPN--LRKNVLCGNI----PPDLFARM-----TAEEMASDELKEMRKNLTKEAIREHQMA 251 Query: 77 KDGATIKE--KCPQCGNEEMNYHTLQLRSADEGATVFYTCTSCGYKFR 122 K G T + C +C + Y +Q RSADE T F C CG +++ Sbjct: 252 KTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 299 >5X51-I nrPDB Length = 115 Score = 34.3 bits (77), Expect = 0.015, Method: Compositional matrix adjust. Identities = 28/130 (21%), Positives = 52/130 (40%), Gaps = 30/130 (23%) Query: 4 VGSLIFCLDCGDLLENPNAVLGSNVECSQCKAIYPKSQFSNLKVV--------TTTADDA 55 + S FCL+C ++L YPK N +++ T A+D Sbjct: 1 MASFRFCLECNNML-------------------YPKEDKENQRLLYSCRNCDYTELAEDP 41 Query: 56 FPSSLRAKKSVVKTSLKKNELKDGATI---KEKCPQCGNEEMNYHTLQLRSADEGATVFY 112 ++ +T+ +++ T+ ++CP+C + + + Q R D T+FY Sbjct: 42 KVYRHELITNIGETAGIVDDIGQDPTLPRSDKECPECHSRDCVFFQSQQRRKDTNMTLFY 101 Query: 113 TCTSCGYKFR 122 C +C FR Sbjct: 102 VCLNCKKTFR 111 >3H0G-I nrPDB Length = 113 Score = 33.9 bits (76), Expect = 0.019, Method: Compositional matrix adjust. Identities = 12/38 (31%), Positives = 19/38 (50%) Query: 84 EKCPQCGNEEMNYHTLQLRSADEGATVFYTCTSCGYKF 121 ++CP+C E ++ R D T+ Y C CG+ F Sbjct: 73 KECPRCHQHEAVFYQTHSRRGDTMMTLIYVCVHCGFAF 110 >5XON-U nrPDB Length = 190 Score = 32.3 bits (72), Expect = 0.050, Method: Compositional matrix adjust. Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 10/84 (11%) Query: 46 KVVTTTADDAFPSSLRAKKSVVKTSLKKNEL-------KDGATIKEKCPQCGNEEMNYHT 98 K+VT +A + P SL+ + + KKN + T + +C +C +++Y Sbjct: 108 KLVTMSAQELAPDSLKKEMEEI---YKKNLFDAQGATENNSVTDRFECGKCKQRKVSYFQ 164 Query: 99 LQLRSADEGATVFYTCTSCGYKFR 122 Q RSA T F C +CG +++ Sbjct: 165 KQTRSAAAPLTTFCKCENCGNRWK 188 >2R92-I nrPDB Length = 122 Score = 31.2 bits (69), Expect = 0.12, Method: Compositional matrix adjust. Identities = 12/37 (32%), Positives = 19/37 (51%) Query: 85 KCPQCGNEEMNYHTLQLRSADEGATVFYTCTSCGYKF 121 +CP+C + E + Q R D +F+ C SC + F Sbjct: 74 ECPKCHSRENVFFQSQQRRKDTSMVLFFVCLSCSHIF 110 >4CFG-A nrPDB Length = 630 Score = 27.3 bits (59), Expect = 1.9, Method: Compositional matrix adjust. Identities = 12/25 (48%), Positives = 14/25 (56%) Query: 13 CGDLLENPNAVLGSNVECSQCKAIY 37 CG L AV GS C QC+A+Y Sbjct: 33 CGSCLNETWAVQGSPYLCPQCRAVY 57 >2E9H-A nrPDB Length = 157 Score = 26.9 bits (58), Expect = 2.3, Method: Compositional matrix adjust. Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 9/66 (13%) Query: 59 SLRAKKSVVKTSLKKNELKD--GATIKE--KCPQCGNEEMNYHTLQLRSADEGATVFYTC 114 ++ + +V S + N+L+D IK+ CP+C N E + H + T+ +C Sbjct: 75 DVKNDRYIVNGSHEANKLQDMLDGFIKKFVLCPECENPETDLHV-----NPKKQTIGNSC 129 Query: 115 TSCGYK 120 +CGY+ Sbjct: 130 KACGYR 135 >2G2K-A nrPDB Length = 170 Score = 26.9 bits (58), Expect = 2.4, Method: Compositional matrix adjust. Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 9/66 (13%) Query: 59 SLRAKKSVVKTSLKKNELKD--GATIKE--KCPQCGNEEMNYHTLQLRSADEGATVFYTC 114 ++ + +V S + N+L+D IK+ CP+C N E + H + T+ +C Sbjct: 68 DVKNDRYIVNGSHEANKLQDMLDGFIKKFVLCPECENPETDLHV-----NPKKQTIGNSC 122 Query: 115 TSCGYK 120 +CGY+ Sbjct: 123 KACGYR 128 >4O1E-A nrPDB Length = 290 Score = 26.6 bits (57), Expect = 2.7, Method: Compositional matrix adjust. Identities = 20/98 (20%), Positives = 47/98 (47%), Gaps = 12/98 (12%) Query: 18 ENPNAVLGSNVECSQCKAIYPKSQFSNLKVVTTTADDA-FPSSLRAKKSVVKTSLKKNEL 76 + P + ++E +C+ I+P Q ++ +V+ T D++ P ++++ + + ++K + Sbjct: 111 KRPGLINSVSLEGDKCEVIFPLIQGTSWQVIALTCDNSGIPQDVQSRVEIAQALVEKAQS 170 Query: 77 KDGATIKEKCPQCGNEEMNYHTLQLR-SADEGATVFYT 113 D A E ++ L + SAD GA + + Sbjct: 171 YDIA----------QERIHIDPLVIALSADNGALLKFA 198 >6GMH-I nrPDB Length = 125 Score = 25.8 bits (55), Expect = 4.8, Method: Compositional matrix adjust. Identities = 11/43 (25%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Query: 81 TIKEKCPQCGNEEMNYHTLQLRSADEGATVFYTCTS--CGYKF 121 T C +CG++E + A++ ++Y CT+ CG+++ Sbjct: 81 TEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRW 123 >3TSR-E nrPDB Length = 457 Score = 25.8 bits (55), Expect = 5.0, Method: Compositional matrix adjust. Identities = 14/24 (58%), Positives = 18/24 (75%), Gaps = 1/24 (4%) Query: 60 LRAKKSVVKTSLKKNELKD-GATI 82 LRAK+S+ + SL NELKD GA + Sbjct: 276 LRAKQSLKELSLASNELKDEGARL 299 >5AH5-A nrPDB Length = 822 Score = 25.8 bits (55), Expect = 5.3, Method: Composition-based stats. Identities = 8/16 (50%), Positives = 12/16 (75%) Query: 77 KDGATIKEKCPQCGNE 92 +D + +K KCPQCG + Sbjct: 464 RDESWMKAKCPQCGGD 479 >4PEQ-B nrPDB Length = 456 Score = 25.0 bits (53), Expect = 9.1, Method: Composition-based stats. Identities = 11/25 (44%), Positives = 17/25 (68%) Query: 58 SSLRAKKSVVKTSLKKNELKDGATI 82 S+L+A S+ + SL+ NEL DG + Sbjct: 45 SALQANASLTELSLRTNELGDGGVL 69 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5M3F-I nrPDB 198 5e-52 5IY6-U nrPDB 124 1e-29 1PQV-S nrPDB 106 3e-24 3GTM-S nrPDB 101 8e-23 3QT1-I nrPDB 86 4e-18 6CNB-I nrPDB 78 1e-15 Sequences not found previously or not previously below threshold: 5XON-U nrPDB 83 3e-17 3H0G-I nrPDB 52 8e-08 5X51-I nrPDB 50 3e-07 2R92-I nrPDB 49 5e-07 6GMH-I nrPDB 44 2e-05 3NDQ-A nrPDB 41 1e-04 4S38-A nrPDB 30 0.30 1NKW-Z nrPDB 30 0.36 2LW4-A nrPDB 29 0.40 2QKD-A nrPDB 27 1.4 6G4J-A nrPDB 27 1.6 4KYW-A nrPDB 27 1.8 4ONY-A nrPDB 26 3.2 >5M3F-I nrPDB Length = 125 Score = 198 bits (503), Expect = 5e-52, Method: Composition-based stats. Identities = 125/125 (100%), Positives = 125/125 (100%) Query: 1 MSVVGSLIFCLDCGDLLENPNAVLGSNVECSQCKAIYPKSQFSNLKVVTTTADDAFPSSL 60 MSVVGSLIFCLDCGDLLENPNAVLGSNVECSQCKAIYPKSQFSNLKVVTTTADDAFPSSL Sbjct: 1 MSVVGSLIFCLDCGDLLENPNAVLGSNVECSQCKAIYPKSQFSNLKVVTTTADDAFPSSL 60 Query: 61 RAKKSVVKTSLKKNELKDGATIKEKCPQCGNEEMNYHTLQLRSADEGATVFYTCTSCGYK 120 RAKKSVVKTSLKKNELKDGATIKEKCPQCGNEEMNYHTLQLRSADEGATVFYTCTSCGYK Sbjct: 61 RAKKSVVKTSLKKNELKDGATIKEKCPQCGNEEMNYHTLQLRSADEGATVFYTCTSCGYK 120 Query: 121 FRTNN 125 FRTNN Sbjct: 121 FRTNN 125 >5IY6-U nrPDB Length = 301 Score = 124 bits (311), Expect = 1e-29, Method: Composition-based stats. Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 15/109 (13%) Query: 18 ENPNAVLGSNVECSQCKAIYPKSQFSNLKVVTTTADDAFPSSLRA-KKSVVKTSLKKNEL 76 +NPN L NV C P F+ + TA++ L+ +K++ K +++++++ Sbjct: 202 KNPN--LRKNVLCGNI----PPDLFARM-----TAEEMASDELKEMRKNLTKEAIREHQM 250 Query: 77 -KDGATIKE--KCPQCGNEEMNYHTLQLRSADEGATVFYTCTSCGYKFR 122 K G T + C +C + Y +Q RSADE T F C CG +++ Sbjct: 251 AKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 299 >1PQV-S nrPDB Length = 309 Score = 106 bits (263), Expect = 3e-24, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 10/83 (12%) Query: 47 VVTTTADDAFPSSLRAK-KSVVKTSLKKNELKDGATIKE------KCPQCGNEEMNYHTL 99 + T A D P+ L+ K + + K +L + GATI+ C +C ++++Y+ L Sbjct: 228 LATCDAKDLAPAPLKQKIEEIAKQNLYNAQ---GATIERSVTDRFTCGKCKEKKVSYYQL 284 Query: 100 QLRSADEGATVFYTCTSCGYKFR 122 Q RSADE T F TC +CG +++ Sbjct: 285 QTRSADEPLTTFCTCEACGNRWK 307 >3GTM-S nrPDB Length = 173 Score = 101 bits (251), Expect = 8e-23, Method: Composition-based stats. Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 10/83 (12%) Query: 47 VVTTTADDAFPSSLRAK-KSVVKTSLKKNELKDGATIKE------KCPQCGNEEMNYHTL 99 + T A D P+ L+ K + + K +L + GATI+ C +C ++++Y+ L Sbjct: 92 LATCDAKDLAPAPLKQKIEEIAKQNLYNAQ---GATIERSVTDRFTCGKCKEKKVSYYQL 148 Query: 100 QLRSADEGATVFYTCTSCGYKFR 122 Q RSAD T F TC +CG +++ Sbjct: 149 QTRSADHPLTTFCTCEACGNRWK 171 >3QT1-I nrPDB Length = 133 Score = 86.0 bits (211), Expect = 4e-18, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 47/126 (37%), Gaps = 28/126 (22%) Query: 9 FCLDCGDLL-----ENPNAVLGSNVECSQCKAIYPK-----SQFSNLKVVTTTADDAFPS 58 FC DC ++L + N +L CS + +N+ D Sbjct: 26 FCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQDIGSD 85 Query: 59 SLRAKKSVVKTSLKKNELKDGATIKEKCPQCGNEEMNYHTLQLRSADEGATVFYTCTSCG 118 + +CP+C + E + LQ+RSADE T FY C +CG Sbjct: 86 PTLPRSD------------------RECPKCHSRENVFFQLQIRSADEPMTTFYKCVNCG 127 Query: 119 YKFRTN 124 ++++ N Sbjct: 128 HRWKEN 133 >5XON-U nrPDB Length = 190 Score = 82.9 bits (203), Expect = 3e-17, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 4/81 (4%) Query: 46 KVVTTTADDAFPSSLR-AKKSVVKTSLKKNELKD---GATIKEKCPQCGNEEMNYHTLQL 101 K+VT +A + P SL+ + + K +L + T + +C +C +++Y Q Sbjct: 108 KLVTMSAQELAPDSLKKEMEEIYKKNLFDAQGATENNSVTDRFECGKCKQRKVSYFQKQT 167 Query: 102 RSADEGATVFYTCTSCGYKFR 122 RSA T F C +CG +++ Sbjct: 168 RSAAAPLTTFCKCENCGNRWK 188 >6CNB-I nrPDB Length = 110 Score = 77.9 bits (190), Expect = 1e-15, Method: Composition-based stats. Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 3/45 (6%) Query: 83 KEKCPQ---CGNEEMNYHTLQLRSADEGATVFYTCTSCGYKFRTN 124 K +CP CG E + LQ+RSADE T FY C +CG++++ N Sbjct: 66 KTQCPNYDTCGGESAYFFQLQIRSADEPMTTFYKCVNCGHRWKEN 110 >3H0G-I nrPDB Length = 113 Score = 51.7 bits (122), Expect = 8e-08, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 41/107 (38%), Gaps = 13/107 (12%) Query: 28 VECSQCKAIYPK----SQFSNLKVVTTTADDAFPSSLRAKKSVVKTSLKKNELKDGATIK 83 +EC+ +YP+ + L + +S + + ++++ + A+ Sbjct: 8 IECNNM--LYPREDKVDRVLRLACRNCDYSEIAATSKVYRHELQSSNVENTTVSHDASTD 65 Query: 84 -------EKCPQCGNEEMNYHTLQLRSADEGATVFYTCTSCGYKFRT 123 ++CP+C E ++ R D T+ Y C CG+ F Sbjct: 66 PTLPRSDKECPRCHQHEAVFYQTHSRRGDTMMTLIYVCVHCGFAFEE 112 >5X51-I nrPDB Length = 115 Score = 49.8 bits (117), Expect = 3e-07, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 43/132 (32%), Gaps = 28/132 (21%) Query: 4 VGSLIFCLDCGDLLENPNAVLGSNVE--CSQC--------KAIYPKSQFSNLKVVTTTAD 53 + S FCL+C ++L + C C +Y +N+ D Sbjct: 1 MASFRFCLECNNMLYPKEDKENQRLLYSCRNCDYTELAEDPKVYRHELITNIGETAGIVD 60 Query: 54 DAFPSSLRAKKSVVKTSLKKNELKDGATIKEKCPQCGNEEMNYHTLQLRSADEGATVFYT 113 D + ++CP+C + + + Q R D T+FY Sbjct: 61 DIGQDPTLPRSD------------------KECPECHSRDCVFFQSQQRRKDTNMTLFYV 102 Query: 114 CTSCGYKFRTNN 125 C +C FR + Sbjct: 103 CLNCKKTFRDES 114 >2R92-I nrPDB Length = 122 Score = 49.0 bits (115), Expect = 5e-07, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 40/126 (31%), Gaps = 28/126 (22%) Query: 9 FCLDCGDLL-----ENPNAVLGSNVECSQCKAIYPK-----SQFSNLKVVTTTADDAFPS 58 FC DC ++L + N +L CS + +N+ D Sbjct: 6 FCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQDIGSD 65 Query: 59 SLRAKKSVVKTSLKKNELKDGATIKEKCPQCGNEEMNYHTLQLRSADEGATVFYTCTSCG 118 + +CP+C + E + Q R D +F+ C SC Sbjct: 66 PTLPRSD------------------RECPKCHSRENVFFQSQQRRKDTSMVLFFVCLSCS 107 Query: 119 YKFRTN 124 + F ++ Sbjct: 108 HIFTSD 113 >6GMH-I nrPDB Length = 125 Score = 43.6 bits (101), Expect = 2e-05, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 23/45 (51%), Gaps = 2/45 (4%) Query: 81 TIKEKCPQCGNEEMNYHTLQLRSADEGATVFYTCTS--CGYKFRT 123 T C +CG++E + A++ ++Y CT+ CG+++ Sbjct: 81 TEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRWTE 125 >3NDQ-A nrPDB Length = 108 Score = 40.9 bits (94), Expect = 1e-04, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 11/42 (26%) Query: 18 ENPNAVLGSNVECSQCKAIYPKSQFSNLKVVTTTADDAFPSS 59 +NPN L NV C P F+ + TA++ Sbjct: 78 KNPN--LRKNVLCGNI----PPDLFARM-----TAEEMASDE 108 >4S38-A nrPDB Length = 406 Score = 29.8 bits (65), Expect = 0.30, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 16/44 (36%), Gaps = 1/44 (2%) Query: 56 FPSSLRAKK-SVVKTSLKKNELKDGATIKEKCPQCGNEEMNYHT 98 P R K+ V + L+ L+ A CP CG + Sbjct: 266 APGEPRTKEVEVAQEILQALGLRAFAPEVTSCPGCGRTTSTFFQ 309 >1NKW-Z nrPDB Length = 60 Score = 29.8 bits (65), Expect = 0.36, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 15/59 (25%) Query: 61 RAKKSVVKTSLKKNELKDGATIKEKCPQCGNEEMNYHTLQLRSADEGATVFYTCTSCGY 119 + K S K ++++ A +CPQC +++++H C +CGY Sbjct: 8 KKKTSKSKRDMRRSHHALTAPNLTECPQCHGKKLSHH---------------ICPNCGY 51 >2LW4-A nrPDB Length = 113 Score = 29.4 bits (64), Expect = 0.40, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 20/48 (41%), Gaps = 9/48 (18%) Query: 15 DLLENPNAVLGSNVECSQCKAIYPKSQFSNLKVVTTTADDAFPSSLRA 62 +L + N L NV C AI P+ ++ T+++ L+ Sbjct: 69 NLKDAKNPDLRRNVLCG---AITPQ------QIAVMTSEEMASDELKE 107 >2QKD-A nrPDB Length = 404 Score = 27.5 bits (59), Expect = 1.4, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 15/41 (36%), Gaps = 1/41 (2%) Query: 84 EKCPQCGNEEMNYHTL-QLRSADEGATVFYTCTSCGYKFRT 123 CP+C L Q+ E + C +CG++ Sbjct: 221 TNCPECNAPAQTNMKLVQIPHFKEVIIMATNCENCGHRTNE 261 >6G4J-A nrPDB Length = 315 Score = 27.5 bits (59), Expect = 1.6, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 1/89 (1%) Query: 20 PNAVLGSNVECSQCKAIYPKSQFSNLKVVTTTADDAFPSSLRA-KKSVVKTSLKKNELKD 78 P L S +E + Y K+ FS L +AD+ L A +K+ + K + Sbjct: 225 PKEQLRSLIEGNPLLQKYKKALFSALNGDYQSADEMKKDMLDAGQKAAQRKQPIKASPQP 284 Query: 79 GATIKEKCPQCGNEEMNYHTLQLRSADEG 107 +++ P+ G +T + + A G Sbjct: 285 ATRQRQQKPRQGKITKTRYTPKQKPAKSG 313 >4KYW-A nrPDB Length = 257 Score = 27.5 bits (59), Expect = 1.8, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 6/37 (16%) Query: 86 CPQCGNEEMNYHTLQLRSADEGATVFYTCTSCGYKFR 122 CP CGN +N+ + FY C C +F Sbjct: 37 CPNCGNNPLNHFE-----NNRPVADFY-CNHCSEEFE 67 >4ONY-A nrPDB Length = 595 Score = 26.3 bits (56), Expect = 3.2, Method: Composition-based stats. Identities = 10/19 (52%), Positives = 12/19 (63%) Query: 93 EMNYHTLQLRSADEGATVF 111 M Y TL LRS DE T++ Sbjct: 81 NMVYQTLMLRSRDEPFTLY 99 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.307 0.123 0.353 Lambda K H 0.267 0.0384 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,203,197 Number of Sequences: 36641 Number of extensions: 124497 Number of successful extensions: 428 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 30 Number of HSP's successfully gapped in prelim test: 9 Number of HSP's that attempted gapping in prelim test: 387 Number of HSP's gapped (non-prelim): 41 length of query: 125 length of database: 10,336,785 effective HSP length: 85 effective length of query: 40 effective length of database: 7,222,300 effective search space: 288892000 effective search space used: 288892000 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 53 (25.1 bits)