BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P32524 (280 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5ZWO-w nrPDB 575 e-165 4DGW-B nrPDB 317 5e-87 6AHD-u nrPDB 63 2e-10 2DT7-B nrPDB 42 3e-04 2DT6-A nrPDB 32 0.22 5GSL-A nrPDB 28 3.1 4E2O-A nrPDB 27 7.3 >5ZWO-w nrPDB Length = 280 Score = 575 bits (1483), Expect = e-165, Method: Compositional matrix adjust. Identities = 280/280 (100%), Positives = 280/280 (100%) Query: 1 MEPEDTQLKEDIKTTVNYIKQHGVEFENKLLEDERFSFIKKDDPLHEYYTKLMNEPTDTV 60 MEPEDTQLKEDIKTTVNYIKQHGVEFENKLLEDERFSFIKKDDPLHEYYTKLMNEPTDTV Sbjct: 1 MEPEDTQLKEDIKTTVNYIKQHGVEFENKLLEDERFSFIKKDDPLHEYYTKLMNEPTDTV 60 Query: 61 SGEDNDRKSEREIARPPDFLFSQYDTGISRRDMEVIKLTARYYAKDKSIVEQMISKDGEA 120 SGEDNDRKSEREIARPPDFLFSQYDTGISRRDMEVIKLTARYYAKDKSIVEQMISKDGEA Sbjct: 61 SGEDNDRKSEREIARPPDFLFSQYDTGISRRDMEVIKLTARYYAKDKSIVEQMISKDGEA 120 Query: 121 RLNFMNSSHPLHKTFTDFVAQYKRVYSFTGQEIKKSKRTILDNCFERTQYWEFEKDKDRE 180 RLNFMNSSHPLHKTFTDFVAQYKRVYSFTGQEIKKSKRTILDNCFERTQYWEFEKDKDRE Sbjct: 121 RLNFMNSSHPLHKTFTDFVAQYKRVYSFTGQEIKKSKRTILDNCFERTQYWEFEKDKDRE 180 Query: 181 HDKLVELCKIQFAAIPWDKFTQVAKFSIPEDTEIFEGSLDLEQMRLRRVQTGIKLFDSIK 240 HDKLVELCKIQFAAIPWDKFTQVAKFSIPEDTEIFEGSLDLEQMRLRRVQTGIKLFDSIK Sbjct: 181 HDKLVELCKIQFAAIPWDKFTQVAKFSIPEDTEIFEGSLDLEQMRLRRVQTGIKLFDSIK 240 Query: 241 PTNEEEKIVSDQGKQKGGDSKGKKRKIRAVGETRLKKSKK 280 PTNEEEKIVSDQGKQKGGDSKGKKRKIRAVGETRLKKSKK Sbjct: 241 PTNEEEKIVSDQGKQKGGDSKGKKRKIRAVGETRLKKSKK 280 >4DGW-B nrPDB Length = 152 Score = 317 bits (811), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 151/151 (100%), Positives = 151/151 (100%) Query: 87 GISRRDMEVIKLTARYYAKDKSIVEQMISKDGEARLNFMNSSHPLHKTFTDFVAQYKRVY 146 GISRRDMEVIKLTARYYAKDKSIVEQMISKDGEARLNFMNSSHPLHKTFTDFVAQYKRVY Sbjct: 2 GISRRDMEVIKLTARYYAKDKSIVEQMISKDGEARLNFMNSSHPLHKTFTDFVAQYKRVY 61 Query: 147 SFTGQEIKKSKRTILDNCFERTQYWEFEKDKDREHDKLVELCKIQFAAIPWDKFTQVAKF 206 SFTGQEIKKSKRTILDNCFERTQYWEFEKDKDREHDKLVELCKIQFAAIPWDKFTQVAKF Sbjct: 62 SFTGQEIKKSKRTILDNCFERTQYWEFEKDKDREHDKLVELCKIQFAAIPWDKFTQVAKF 121 Query: 207 SIPEDTEIFEGSLDLEQMRLRRVQTGIKLFD 237 SIPEDTEIFEGSLDLEQMRLRRVQTGIKLFD Sbjct: 122 SIPEDTEIFEGSLDLEQMRLRRVQTGIKLFD 152 >6AHD-u nrPDB Length = 793 Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 52/235 (22%), Positives = 111/235 (47%), Gaps = 38/235 (16%) Query: 7 QLKEDIKTTVNYIKQHGVEFENKLLEDE----RFSFIKKDDPLHEYYTKLMNE------- 55 +++ + T +++ ++G EFE ++ ++E +F+F+ +DP H YY ++E Sbjct: 48 EVRNIVDKTASFVARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQ 107 Query: 56 -PTDTVS----------GEDNDRKSEREIAR--------PPDFLFSQYDTGISRRDMEVI 96 P+ + + +K + ++ + PP+F F IS D++V+ Sbjct: 108 EPSAAIPKVMQQQQQTTQQQLPQKVQAQVIQETIVPKEPPPEFEFIADPPSISAFDLDVV 167 Query: 97 KLTARYYAKD-KSIVEQMISKDGEA-RLNFMNSSHPLHKTFTDFVAQYKRVYSFTGQEIK 154 KLTA++ A++ + + Q++ K+ + +F+ H L FT V QY ++ Sbjct: 168 KLTAQFVARNGRQFLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLFS 227 Query: 155 KSK------RTILDNCFERTQYWEFEKDKDREHDKLVELCKIQFAAIPWDKFTQV 203 K K R +LD R ++ +F++ + ++ ++ E ++ +A I W F V Sbjct: 228 KLKKEAENPREVLDQVCYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVV 282 >2DT7-B nrPDB Length = 85 Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%) Query: 76 PPDFLFSQYDTGISRRDMEVIKLTARYYAKD-KSIVEQMISKDG-EARLNFMNSSHPLHK 133 PP+F F IS D++V+KLTA++ A++ + + Q++ K+ + +F+ H L Sbjct: 15 PPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQKEQRNYQFDFLRPQHSLFN 74 Query: 134 TFTDFVAQYKR 144 FT V QY + Sbjct: 75 YFTKLVEQYTK 85 Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust. Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 4/50 (8%) Query: 12 IKTTVNYIKQHGVEFENKLLEDER----FSFIKKDDPLHEYYTKLMNEPT 57 +K T ++ ++G +F +L++ E+ F F++ L Y+TKL+ + T Sbjct: 35 VKLTAQFVARNGRQFLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYT 84 >2DT6-A nrPDB Length = 64 Score = 32.3 bits (72), Expect = 0.22, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 33/53 (62%), Gaps = 4/53 (7%) Query: 7 QLKEDIKTTVNYIKQHGVEFENKLLEDE----RFSFIKKDDPLHEYYTKLMNE 55 +++ + T +++ ++G EFE ++ ++E +F+F+ +DP H YY ++E Sbjct: 2 EVRNIVDKTASFVARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSE 54 >5GSL-A nrPDB Length = 778 Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 59/164 (35%), Gaps = 33/164 (20%) Query: 56 PTDTVSGEDNDRKSEREIARPPDFLFSQYDTGISRRDMEVIKLTARYYAKDKSIVEQMIS 115 P +V E DR R +AR EV A + DK + + Sbjct: 574 PYLSVDAEGIDRMVVRNVAR------------------EVKGGEAIAWIGDKVVGTIVRK 615 Query: 116 KDGEA-----RLNFMNSSHPLHKTFTDFVAQYKRVYSFTGQEIKKSKRTILDNCFERTQY 170 G A RL + +S H +H+ F D + Q + V +E++ S R I+ R Y Sbjct: 616 GKGSAVILGFRLQYYSSYHDMHRKFVDKILQLQGV----KREVEVSNRDII--AIPRIHY 669 Query: 171 WEFEKDKDREHDKLVELCKIQFAAIPWDKFTQVAKFSIPEDTEI 214 +D E V+ ++F K IP D EI Sbjct: 670 LVLVNPRDEEVAGKVKYRGVEFEI----KMKGRGVLFIPVDVEI 709 >4E2O-A nrPDB Length = 454 Score = 27.3 bits (59), Expect = 7.3, Method: Compositional matrix adjust. Identities = 13/37 (35%), Positives = 21/37 (56%) Query: 236 FDSIKPTNEEEKIVSDQGKQKGGDSKGKKRKIRAVGE 272 F+++ PTN++ V+D GGD KG K+ + E Sbjct: 20 FNNMDPTNDQNVNVNDPKGYFGGDLKGVTAKLDYIKE 56 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5ZWO-w nrPDB 442 e-125 6AHD-u nrPDB 252 1e-67 4DGW-B nrPDB 250 6e-67 2DT7-B nrPDB 109 1e-24 Sequences not found previously or not previously below threshold: 2DT6-A nrPDB 80 1e-15 1X4O-A nrPDB 41 6e-04 2E5Z-A nrPDB 39 0.002 2E60-A nrPDB 39 0.003 1UG0-A nrPDB 37 0.009 5YSW-A nrPDB 32 0.22 6CGM-A nrPDB 32 0.28 3PS9-A nrPDB 30 1.7 5XOM-A nrPDB 29 3.3 1IV8-A nrPDB 29 3.5 1T33-A nrPDB 28 4.1 4CH7-A nrPDB 28 4.4 4WTQ-A nrPDB 27 6.5 4DVY-P nrPDB 27 7.6 4B9C-A nrPDB 27 8.9 4N8U-A nrPDB 27 9.6 >5ZWO-w nrPDB Length = 280 Score = 442 bits (1138), Expect = e-125, Method: Composition-based stats. Identities = 280/280 (100%), Positives = 280/280 (100%) Query: 1 MEPEDTQLKEDIKTTVNYIKQHGVEFENKLLEDERFSFIKKDDPLHEYYTKLMNEPTDTV 60 MEPEDTQLKEDIKTTVNYIKQHGVEFENKLLEDERFSFIKKDDPLHEYYTKLMNEPTDTV Sbjct: 1 MEPEDTQLKEDIKTTVNYIKQHGVEFENKLLEDERFSFIKKDDPLHEYYTKLMNEPTDTV 60 Query: 61 SGEDNDRKSEREIARPPDFLFSQYDTGISRRDMEVIKLTARYYAKDKSIVEQMISKDGEA 120 SGEDNDRKSEREIARPPDFLFSQYDTGISRRDMEVIKLTARYYAKDKSIVEQMISKDGEA Sbjct: 61 SGEDNDRKSEREIARPPDFLFSQYDTGISRRDMEVIKLTARYYAKDKSIVEQMISKDGEA 120 Query: 121 RLNFMNSSHPLHKTFTDFVAQYKRVYSFTGQEIKKSKRTILDNCFERTQYWEFEKDKDRE 180 RLNFMNSSHPLHKTFTDFVAQYKRVYSFTGQEIKKSKRTILDNCFERTQYWEFEKDKDRE Sbjct: 121 RLNFMNSSHPLHKTFTDFVAQYKRVYSFTGQEIKKSKRTILDNCFERTQYWEFEKDKDRE 180 Query: 181 HDKLVELCKIQFAAIPWDKFTQVAKFSIPEDTEIFEGSLDLEQMRLRRVQTGIKLFDSIK 240 HDKLVELCKIQFAAIPWDKFTQVAKFSIPEDTEIFEGSLDLEQMRLRRVQTGIKLFDSIK Sbjct: 181 HDKLVELCKIQFAAIPWDKFTQVAKFSIPEDTEIFEGSLDLEQMRLRRVQTGIKLFDSIK 240 Query: 241 PTNEEEKIVSDQGKQKGGDSKGKKRKIRAVGETRLKKSKK 280 PTNEEEKIVSDQGKQKGGDSKGKKRKIRAVGETRLKKSKK Sbjct: 241 PTNEEEKIVSDQGKQKGGDSKGKKRKIRAVGETRLKKSKK 280 >6AHD-u nrPDB Length = 793 Score = 252 bits (644), Expect = 1e-67, Method: Composition-based stats. Identities = 52/235 (22%), Positives = 111/235 (47%), Gaps = 38/235 (16%) Query: 7 QLKEDIKTTVNYIKQHGVEFENKLLEDE----RFSFIKKDDPLHEYYTKLMNE------- 55 +++ + T +++ ++G EFE ++ ++E +F+F+ +DP H YY ++E Sbjct: 48 EVRNIVDKTASFVARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQ 107 Query: 56 -PTDTVSG----------EDNDRKSEREIAR--------PPDFLFSQYDTGISRRDMEVI 96 P+ + + +K + ++ + PP+F F IS D++V+ Sbjct: 108 EPSAAIPKVMQQQQQTTQQQLPQKVQAQVIQETIVPKEPPPEFEFIADPPSISAFDLDVV 167 Query: 97 KLTARYYAKD-KSIVEQMISKDG-EARLNFMNSSHPLHKTFTDFVAQYKRVYSFTGQEIK 154 KLTA++ A++ + + Q++ K+ + +F+ H L FT V QY ++ Sbjct: 168 KLTAQFVARNGRQFLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLFS 227 Query: 155 KSK------RTILDNCFERTQYWEFEKDKDREHDKLVELCKIQFAAIPWDKFTQV 203 K K R +LD R ++ +F++ + ++ ++ E ++ +A I W F V Sbjct: 228 KLKKEAENPREVLDQVCYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVV 282 >4DGW-B nrPDB Length = 152 Score = 250 bits (637), Expect = 6e-67, Method: Composition-based stats. Identities = 151/151 (100%), Positives = 151/151 (100%) Query: 87 GISRRDMEVIKLTARYYAKDKSIVEQMISKDGEARLNFMNSSHPLHKTFTDFVAQYKRVY 146 GISRRDMEVIKLTARYYAKDKSIVEQMISKDGEARLNFMNSSHPLHKTFTDFVAQYKRVY Sbjct: 2 GISRRDMEVIKLTARYYAKDKSIVEQMISKDGEARLNFMNSSHPLHKTFTDFVAQYKRVY 61 Query: 147 SFTGQEIKKSKRTILDNCFERTQYWEFEKDKDREHDKLVELCKIQFAAIPWDKFTQVAKF 206 SFTGQEIKKSKRTILDNCFERTQYWEFEKDKDREHDKLVELCKIQFAAIPWDKFTQVAKF Sbjct: 62 SFTGQEIKKSKRTILDNCFERTQYWEFEKDKDREHDKLVELCKIQFAAIPWDKFTQVAKF 121 Query: 207 SIPEDTEIFEGSLDLEQMRLRRVQTGIKLFD 237 SIPEDTEIFEGSLDLEQMRLRRVQTGIKLFD Sbjct: 122 SIPEDTEIFEGSLDLEQMRLRRVQTGIKLFD 152 >2DT7-B nrPDB Length = 85 Score = 109 bits (272), Expect = 1e-24, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%) Query: 76 PPDFLFSQYDTGISRRDMEVIKLTARYYAKD-KSIVEQMISKDG-EARLNFMNSSHPLHK 133 PP+F F IS D++V+KLTA++ A++ + + Q++ K+ + +F+ H L Sbjct: 15 PPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQKEQRNYQFDFLRPQHSLFN 74 Query: 134 TFTDFVAQYKR 144 FT V QY + Sbjct: 75 YFTKLVEQYTK 85 Score = 36.6 bits (83), Expect = 0.013, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 30/52 (57%), Gaps = 4/52 (7%) Query: 10 EDIKTTVNYIKQHGVEFENKLLEDE----RFSFIKKDDPLHEYYTKLMNEPT 57 + +K T ++ ++G +F +L++ E +F F++ L Y+TKL+ + T Sbjct: 33 DVVKLTAQFVARNGRQFLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYT 84 >2DT6-A nrPDB Length = 64 Score = 79.8 bits (195), Expect = 1e-15, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 36/61 (59%), Gaps = 4/61 (6%) Query: 7 QLKEDIKTTVNYIKQHGVEFENKLLEDE----RFSFIKKDDPLHEYYTKLMNEPTDTVSG 62 +++ + T +++ ++G EFE ++ ++E +F+F+ +DP H YY ++E + + Sbjct: 2 EVRNIVDKTASFVARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQ 61 Query: 63 E 63 E Sbjct: 62 E 62 Score = 32.4 bits (72), Expect = 0.25, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 26/53 (49%), Gaps = 2/53 (3%) Query: 94 EVIKLTARYYAKDKSIVEQMISKDG--EARLNFMNSSHPLHKTFTDFVAQYKR 144 ++ TA + A++ E I ++ + NF+N + P H + V+++K Sbjct: 5 NIVDKTASFVARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKE 57 >1X4O-A nrPDB Length = 78 Score = 40.8 bits (94), Expect = 6e-04, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 5/58 (8%) Query: 3 PEDTQLKEDIKTTVNYIKQHGVEFENKLLEDER----FSFI-KKDDPLHEYYTKLMNE 55 PED + K + +I G E E L++ R FSF+ + + YY + ++E Sbjct: 12 PEDEEAKNLAEKLARFIADGGPEVETIALQNNRENQAFSFLYDPNSQGYRYYRQKLDE 69 >2E5Z-A nrPDB Length = 90 Score = 38.9 bits (89), Expect = 0.002, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Query: 7 QLKEDIKTTVNYIKQHGVEFENKLL--EDERFSFIKKDDPLHEYYTKL 52 ++ I Y+ ++G++FE + D+RF F++ + YY Sbjct: 23 DVQPVIDKLAEYVARNGLKFETSVRAKNDQRFEFLQPWHQYNAYYEFK 70 Score = 27.4 bits (59), Expect = 7.9, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 20/48 (41%), Gaps = 1/48 (2%) Query: 95 VIKLTARYYAKDKSIVEQMISKDGEARLNFMNSSHPLHKTFTDFVAQY 142 VI A Y A++ E + + R F+ H + + +F Q+ Sbjct: 27 VIDKLAEYVARNGLKFETSVRAKNDQRFEFLQPWHQ-YNAYYEFKKQF 73 >2E60-A nrPDB Length = 101 Score = 38.5 bits (88), Expect = 0.003, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 7/69 (10%) Query: 3 PEDTQLKEDIKTTVNYIKQHGVEFE----NKLLEDERFSFIKKD---DPLHEYYTKLMNE 55 P ++ I+ T +++ + G +FE K + +F F++ D +P +++ K M E Sbjct: 22 PPTAKMHAIIERTASFVCRQGAQFEIMLKAKQARNSQFDFLRFDHYLNPYYKFIQKAMKE 81 Query: 56 PTDTVSGED 64 TV E+ Sbjct: 82 GRYTVLAEN 90 Score = 30.1 bits (66), Expect = 1.1, Method: Composition-based stats. Identities = 9/52 (17%), Positives = 24/52 (46%), Gaps = 3/52 (5%) Query: 95 VIKLTARYYAKDKSIVEQMISKDG--EARLNFMNSSHPLHKTFTDFVAQYKR 144 +I+ TA + + + E M+ ++ +F+ H L+ + F+ + + Sbjct: 30 IIERTASFVCRQGAQFEIMLKAKQARNSQFDFLRFDHYLNPYY-KFIQKAMK 80 >1UG0-A nrPDB Length = 88 Score = 37.0 bits (84), Expect = 0.009, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 5/58 (8%) Query: 3 PEDTQLKEDIKTTVNYIKQHGVEFENKLLEDER----FSFI-KKDDPLHEYYTKLMNE 55 PE + + I+ ++ + G E E +ED + F+F+ K+ YY + + E Sbjct: 22 PEGAETRRVIEKLARFVAEGGPELEKVAMEDYKDNPAFTFLHDKNSREFLYYRRKVAE 79 >5YSW-A nrPDB Length = 441 Score = 32.4 bits (72), Expect = 0.22, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Query: 18 YIKQHGVEFENKLLEDERF--SFIKKDDPLHEYYTKLMN 54 + K+ EF +L +D+ SFI D P H Y KL+ Sbjct: 105 WFKELSPEFRERLRDDKARAGSFINMDPPEHTRYRKLLT 143 >6CGM-A nrPDB Length = 700 Score = 32.0 bits (71), Expect = 0.28, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 33/84 (39%), Gaps = 11/84 (13%) Query: 111 EQMISKDGEARLNFMNSSHPLHKTFTDFVAQYKRVYSFTGQEIKKSKRTILDNCFERTQY 170 E MI KDG+ + + +H F D++ Q + + LD E QY Sbjct: 15 EIMIQKDGKFQFD--KDKEAVHSYFVDYINQNT--------VFFHNLKEKLDYLVEN-QY 63 Query: 171 WEFEKDKDREHDKLVELCKIQFAA 194 +E E + + E+ K +A Sbjct: 64 YEEEFLSLYSFEDIKEVFKTAYAK 87 >3PS9-A nrPDB Length = 676 Score = 29.7 bits (65), Expect = 1.7, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 6/69 (8%) Query: 62 GEDNDRKSEREIARPPDFLFSQYDTGISRRDMEVIKLTARYYAKDKSIVEQMISKDGEAR 121 G D+D K + +P + F+ T +SR D + + Y++ D + E G + Sbjct: 2 GTDDDDKMKHYSIQPANLEFNAEGTPVSR-DFDDV-----YFSNDNGLEETRYVFLGGNQ 55 Query: 122 LNFMNSSHP 130 L HP Sbjct: 56 LEVRFPEHP 64 >5XOM-A nrPDB Length = 393 Score = 28.5 bits (62), Expect = 3.3, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 33/84 (39%), Gaps = 4/84 (4%) Query: 154 KKSKRTILDNCFERTQYWEFEKD---KDREHDKLVELCKIQFAAIPWDKFTQVAKFSIPE 210 ++S I+D+ + Q E D K ++ E I + W V ++ Sbjct: 8 QRSPVEIIDDVKDEIQKRELIYDALHKLNSPNEEKEYFNIHAWDV-WHDMISVRALTVDS 66 Query: 211 DTEIFEGSLDLEQMRLRRVQTGIK 234 D EI++ + ++ + TG K Sbjct: 67 DVEIYKVLKAMSSAKITQATTGYK 90 >1IV8-A nrPDB Length = 720 Score = 28.5 bits (62), Expect = 3.5, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 34/88 (38%), Gaps = 6/88 (6%) Query: 84 YDTGISRRDM-EVIKLTARYYAKDKSIVEQM-ISKDGEARLNFMNSSHPLHKTFTDFV-- 139 YD D+ +IK K E++ ++ DG +F+N S+ L + + Sbjct: 234 YDPEKYINDLRSIIKNKIIIVEKILGFQEELKLNSDGTTGYDFLNYSNLLFNFNQEIMDS 293 Query: 140 --AQYKRVYSFTGQEIKKSKRTILDNCF 165 + + IKK K I+D F Sbjct: 294 IYENFTAEKISISESIKKIKAQIIDELF 321 >1T33-A nrPDB Length = 224 Score = 28.1 bits (61), Expect = 4.1, Method: Composition-based stats. Identities = 28/125 (22%), Positives = 48/125 (38%), Gaps = 18/125 (14%) Query: 67 RKSEREIARP-PDFLFSQYDTGISRRDMEVIKLTARYYAKDKSIVEQMISKDGEARLNFM 125 K+ER ++P PD + ++ ++M ++ K I + +S +L Sbjct: 79 EKAERLFSQPAPDRDAIRELILLACKNMIMLLTQEDTVNLSKFISREQLSPTSAYQLVHE 138 Query: 126 NSSHPLHKTFTDFVAQY-------KRVYSFTGQE------IKKSKRTILDNCFERTQYWE 172 PLH T VA Y R+ T + K TIL RT + + Sbjct: 139 QVIDPLHTHLTRLVAAYTGCDANDTRMILHTHALLGEVLAFRLGKETIL----LRTGWPQ 194 Query: 173 FEKDK 177 F+++K Sbjct: 195 FDEEK 199 >4CH7-A nrPDB Length = 342 Score = 28.1 bits (61), Expect = 4.4, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 41/112 (36%), Gaps = 17/112 (15%) Query: 82 SQYDTGISRRDMEVIKLTA-RYYAKDKSIVEQMISKDGEARLNFMNSSH-----PLHKTF 135 IS + +V++L A R KD ++ + +L++ + + T+ Sbjct: 107 LAVPPEISELE-DVVRLMAERERVKDYLVLRVVRLFKIGVKLDYESPAEKESVDTKVYTY 165 Query: 136 TDFVAQYKRVYSFTGQEIKKSKRTILDNCFERTQYWEFEKDKDREHDKLVEL 187 T + KR+ S T +R L E+ K ++L+E Sbjct: 166 TPLTEEEKRIVSITQGSFPLVERPFL----------EYAKRLRMSEEELLEK 207 >4WTQ-A nrPDB Length = 293 Score = 27.4 bits (59), Expect = 6.5, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 24/63 (38%), Gaps = 4/63 (6%) Query: 20 KQHGVEFENKLLEDERFSFIKKDDPLHEYYTK---LMNEPTDTVSGEDND-RKSEREIAR 75 G FE + + F I + H ++ + T ++G D+ + + +I Sbjct: 170 AHSGPNFEATVGDRVEFVMITHGEYYHTFHMHGHRWADNRTGMLTGPDDPSQVVDNKIVG 229 Query: 76 PPD 78 P D Sbjct: 230 PAD 232 >4DVY-P nrPDB Length = 876 Score = 27.4 bits (59), Expect = 7.6, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 79/216 (36%), Gaps = 20/216 (9%) Query: 57 TDTVSGEDNDRKSEREIARPPD-------FLFSQYDTGISRRDMEVIKLTARYYAKDKSI 109 +T+ +++ + A P F + D ++ D + + + ++ Sbjct: 3 NETIDQTRTPDQTQSQTAFDPQQFINNLQVAFIKVDNVVASFDPDQKPIVDKNDRDNRQA 62 Query: 110 VEQMISKDGEARLNFMNSSHPLHKTFTDFVAQYKRVYSFTG----QEIKKSKRTILDNCF 165 + + E + + ++ F+DF+ + + + + KS + D + Sbjct: 63 FDGISQLREEYSNKAIKNPTKKNQYFSDFIDKSNDLINKDNLIDVESSTKSFQKFGDQRY 122 Query: 166 E-RTQYWEFEKDKDREHDKLVELCKIQFAAIPWDKFTQVAKFSIPEDTEIFEGSLDLEQM 224 + T + +KD + + + + P + A+F + + F G + Q+ Sbjct: 123 QIFTSWVSMQKDPSKINTRSIRNFMENIIQPPIPDDKEKAEF-LKSAKQSFAGIIIGNQI 181 Query: 225 RLRRVQTGIKLFD-SIKPTNEEEKIVSDQGKQKGGD 259 R + G+ FD S+K E EK G GGD Sbjct: 182 RTDQKFMGV--FDESLKERQEAEK----NGGPTGGD 211 >4B9C-A nrPDB Length = 150 Score = 27.0 bits (58), Expect = 8.9, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 42/111 (37%), Gaps = 21/111 (18%) Query: 78 DFLFSQYDTGISRRDMEVIKLTARYYAKDKSIVEQM----------ISKDGEARLNFMNS 127 DF F ++TG D++ +K+ RYY K+ +++M KD + R + Sbjct: 22 DFSFRMFNTGNEAIDLKDVKV--RYYFKEDVSIDEMNWAVYFYSLGSEKDVQCRFYELPG 79 Query: 128 SHPLHKTFTDFVAQYKRVYSFTGQEIKKSKRTILDNCFERTQYWEFEKDKD 178 +K +F + + + F + + +FE+ D Sbjct: 80 KKEANKYLE---------ITFKSGTLSPNDVMYITGEFYKNDWTKFEQRDD 121 >4N8U-A nrPDB Length = 281 Score = 27.0 bits (58), Expect = 9.6, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 24/63 (38%), Gaps = 4/63 (6%) Query: 20 KQHGVEFENKLLEDERFSFIKKDDPLHEYYTK---LMNEPTDTVSGEDNDRKS-EREIAR 75 G FE + + F I + H ++ + T ++G D+ + + +I Sbjct: 170 AHSGPNFEATVGDRVEFVMITHGEYYHTFHMHGHRWADNRTGLLTGPDDPSQVIDNKIVG 229 Query: 76 PPD 78 P D Sbjct: 230 PAD 232 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.307 0.131 0.346 Lambda K H 0.267 0.0408 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 10,803,007 Number of Sequences: 36641 Number of extensions: 440259 Number of successful extensions: 1300 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 27 Number of HSP's that attempted gapping in prelim test: 1243 Number of HSP's gapped (non-prelim): 60 length of query: 280 length of database: 10,336,785 effective HSP length: 96 effective length of query: 184 effective length of database: 6,819,249 effective search space: 1254741816 effective search space used: 1254741816 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.5 bits) S2: 58 (27.0 bits)