BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P32504 (956 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6GYP-E nrPDB 1978 0.0 1FM4-A nrPDB 33 0.46 4BKC-A nrPDB 30 4.0 >6GYP-E nrPDB Length = 956 Score = 1978 bits (5125), Expect = 0.0, Method: Compositional matrix adjust. Identities = 956/956 (100%), Positives = 956/956 (100%) Query: 1 MRSSILFLLKLMKIMDVQQQQEAMSSEDRFQELVDSLKPRTAHQYKTYYTKYIQWCQLNQ 60 MRSSILFLLKLMKIMDVQQQQEAMSSEDRFQELVDSLKPRTAHQYKTYYTKYIQWCQLNQ Sbjct: 1 MRSSILFLLKLMKIMDVQQQQEAMSSEDRFQELVDSLKPRTAHQYKTYYTKYIQWCQLNQ 60 Query: 61 IIPTPEDNSVNSVPYKDLPISAELIHWFLLDTLITDDKPGEKREETEDLDEEEENSFKIA 120 IIPTPEDNSVNSVPYKDLPISAELIHWFLLDTLITDDKPGEKREETEDLDEEEENSFKIA Sbjct: 61 IIPTPEDNSVNSVPYKDLPISAELIHWFLLDTLITDDKPGEKREETEDLDEEEENSFKIA 120 Query: 121 TLKKIIGSLNFLSKLCKVHENPNANIDTKYLESVTKLHTHWIDSQKAITTNETNNTNTQV 180 TLKKIIGSLNFLSKLCKVHENPNANIDTKYLESVTKLHTHWIDSQKAITTNETNNTNTQV Sbjct: 121 TLKKIIGSLNFLSKLCKVHENPNANIDTKYLESVTKLHTHWIDSQKAITTNETNNTNTQV 180 Query: 181 LCPPLLKVSLNLWNPETNHLSEKFFKTCSEKLRFLVDFQLRSYLNLSFEERSKIRFGSLK 240 LCPPLLKVSLNLWNPETNHLSEKFFKTCSEKLRFLVDFQLRSYLNLSFEERSKIRFGSLK Sbjct: 181 LCPPLLKVSLNLWNPETNHLSEKFFKTCSEKLRFLVDFQLRSYLNLSFEERSKIRFGSLK 240 Query: 241 LGKRDRDAIIYHKVTHSAEKKDTPGHHQLLALLPQDCPFICPQTTLAAYLYLRFYGIPSV 300 LGKRDRDAIIYHKVTHSAEKKDTPGHHQLLALLPQDCPFICPQTTLAAYLYLRFYGIPSV Sbjct: 241 LGKRDRDAIIYHKVTHSAEKKDTPGHHQLLALLPQDCPFICPQTTLAAYLYLRFYGIPSV 300 Query: 301 SKGDGFPNLNADENGSLLQDIPILRGKSLTTYPREETFSNYYTTVFRYCHLPYKRREYFN 360 SKGDGFPNLNADENGSLLQDIPILRGKSLTTYPREETFSNYYTTVFRYCHLPYKRREYFN Sbjct: 301 SKGDGFPNLNADENGSLLQDIPILRGKSLTTYPREETFSNYYTTVFRYCHLPYKRREYFN 360 Query: 361 KCNLVYPTWDEDTFRTFFNEENHGNWLEQPEAFAFPDKIPFDFKKIMNFKSPYTSYSTNA 420 KCNLVYPTWDEDTFRTFFNEENHGNWLEQPEAFAFPDKIPFDFKKIMNFKSPYTSYSTNA Sbjct: 361 KCNLVYPTWDEDTFRTFFNEENHGNWLEQPEAFAFPDKIPFDFKKIMNFKSPYTSYSTNA 420 Query: 421 KKDPFPPPKDLLVQIFPEIDEYKRHDYEGLSQNSRDFLDLMEVLRERFLSNLPWIYKFFP 480 KKDPFPPPKDLLVQIFPEIDEYKRHDYEGLSQNSRDFLDLMEVLRERFLSNLPWIYKFFP Sbjct: 421 KKDPFPPPKDLLVQIFPEIDEYKRHDYEGLSQNSRDFLDLMEVLRERFLSNLPWIYKFFP 480 Query: 481 NHDIFQDPIFGNSDFQSYFNDKTIHSKGSPILSFDILPGFNKIYKNKTNFYSLLIERPSQ 540 NHDIFQDPIFGNSDFQSYFNDKTIHSKGSPILSFDILPGFNKIYKNKTNFYSLLIERPSQ Sbjct: 481 NHDIFQDPIFGNSDFQSYFNDKTIHSKGSPILSFDILPGFNKIYKNKTNFYSLLIERPSQ 540 Query: 541 LTFASSHNPDTHPTQKQESEGPLQMSQLDTTQLNELLKQQSFEYVQFQTLSNFQILLSVF 600 LTFASSHNPDTHPTQKQESEGPLQMSQLDTTQLNELLKQQSFEYVQFQTLSNFQILLSVF Sbjct: 541 LTFASSHNPDTHPTQKQESEGPLQMSQLDTTQLNELLKQQSFEYVQFQTLSNFQILLSVF 600 Query: 601 NKIFEKLEMKKSSRGYILHQLNLFKITLDERIKKSKIDDADKFIRDNQPIKKEENIVNED 660 NKIFEKLEMKKSSRGYILHQLNLFKITLDERIKKSKIDDADKFIRDNQPIKKEENIVNED Sbjct: 601 NKIFEKLEMKKSSRGYILHQLNLFKITLDERIKKSKIDDADKFIRDNQPIKKEENIVNED 660 Query: 661 GPNTSRRTKRPKQIRLLSIADSSDESSTEDSNVFKKDGESIEDGAYGENEDENDSEMQEQ 720 GPNTSRRTKRPKQIRLLSIADSSDESSTEDSNVFKKDGESIEDGAYGENEDENDSEMQEQ Sbjct: 661 GPNTSRRTKRPKQIRLLSIADSSDESSTEDSNVFKKDGESIEDGAYGENEDENDSEMQEQ 720 Query: 721 LKSMINELINSKISTFLRDQMDQFELKINALLDKILEEKVTRIIEQKLGSHTGKFSTLKR 780 LKSMINELINSKISTFLRDQMDQFELKINALLDKILEEKVTRIIEQKLGSHTGKFSTLKR Sbjct: 721 LKSMINELINSKISTFLRDQMDQFELKINALLDKILEEKVTRIIEQKLGSHTGKFSTLKR 780 Query: 781 PQLYMTEEHNVGFDMEVPKKLRTSGKYAETVKDNDDHQAMSTTASPSPEQDQEAKSYTDE 840 PQLYMTEEHNVGFDMEVPKKLRTSGKYAETVKDNDDHQAMSTTASPSPEQDQEAKSYTDE Sbjct: 781 PQLYMTEEHNVGFDMEVPKKLRTSGKYAETVKDNDDHQAMSTTASPSPEQDQEAKSYTDE 840 Query: 841 QEFMLDKSIDSIEGIILEWFTPNAKYANQCVHSMNKSGNKSWRANCEALYKERKSIVEFY 900 QEFMLDKSIDSIEGIILEWFTPNAKYANQCVHSMNKSGNKSWRANCEALYKERKSIVEFY Sbjct: 841 QEFMLDKSIDSIEGIILEWFTPNAKYANQCVHSMNKSGNKSWRANCEALYKERKSIVEFY 900 Query: 901 IYLVNHESLDRYKAVDICEKLRDQNEGSFSRLAKFLRKWRHDHQNSFDGLLVYLSN 956 IYLVNHESLDRYKAVDICEKLRDQNEGSFSRLAKFLRKWRHDHQNSFDGLLVYLSN Sbjct: 901 IYLVNHESLDRYKAVDICEKLRDQNEGSFSRLAKFLRKWRHDHQNSFDGLLVYLSN 956 >1FM4-A nrPDB Length = 159 Score = 33.5 bits (75), Expect = 0.46, Method: Composition-based stats. Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 5/90 (5%) Query: 631 RIKKSKIDDADKFIRDNQP--IKKEENIVNEDGPNTSRRTKRPKQIRLLSIADSSDESST 688 R+ K+ I D DK + P I ENI GP T ++ P+ + D DE Sbjct: 17 RMFKAFILDGDKLVPKVAPQAISSVENIEGNGGPGTIKKINFPEGFPFKYVKDRVDEV-- 74 Query: 689 EDSNVFKKDGESIEDGAYGENEDENDSEMQ 718 D FK + IE G G+ ++ +E++ Sbjct: 75 -DHTNFKYNYSVIEGGPVGDTLEKISNEIK 103 >4BKC-A nrPDB Length = 159 Score = 30.4 bits (67), Expect = 4.0, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 5/90 (5%) Query: 631 RIKKSKIDDADKFIRDNQP--IKKEENIVNEDGPNTSRRTKRPKQIRLLSIADSSDESST 688 R+ K+ I D D P I ENI GP T ++ P+ + D DE Sbjct: 17 RLFKAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPEGFPFKYVKDRVDEV-- 74 Query: 689 EDSNVFKKDGESIEDGAYGENEDENDSEMQ 718 D FK + IE G G+ ++ +E++ Sbjct: 75 -DHTNFKYNYSVIEGGPIGDTLEKISNEIK 103 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6GYP-E nrPDB 2018 0.0 Sequences not found previously or not previously below threshold: 4UOP-A nrPDB 37 0.041 1FM4-A nrPDB 35 0.16 4YZR-A nrPDB 34 0.32 6A83-A nrPDB 33 0.60 4BKC-A nrPDB 32 1.3 5YH8-A nrPDB 32 1.9 4KZG-A nrPDB 31 2.3 5KBF-A nrPDB 31 3.0 CONVERGED! >6GYP-E nrPDB Length = 956 Score = 2018 bits (5227), Expect = 0.0, Method: Composition-based stats. Identities = 956/956 (100%), Positives = 956/956 (100%) Query: 1 MRSSILFLLKLMKIMDVQQQQEAMSSEDRFQELVDSLKPRTAHQYKTYYTKYIQWCQLNQ 60 MRSSILFLLKLMKIMDVQQQQEAMSSEDRFQELVDSLKPRTAHQYKTYYTKYIQWCQLNQ Sbjct: 1 MRSSILFLLKLMKIMDVQQQQEAMSSEDRFQELVDSLKPRTAHQYKTYYTKYIQWCQLNQ 60 Query: 61 IIPTPEDNSVNSVPYKDLPISAELIHWFLLDTLITDDKPGEKREETEDLDEEEENSFKIA 120 IIPTPEDNSVNSVPYKDLPISAELIHWFLLDTLITDDKPGEKREETEDLDEEEENSFKIA Sbjct: 61 IIPTPEDNSVNSVPYKDLPISAELIHWFLLDTLITDDKPGEKREETEDLDEEEENSFKIA 120 Query: 121 TLKKIIGSLNFLSKLCKVHENPNANIDTKYLESVTKLHTHWIDSQKAITTNETNNTNTQV 180 TLKKIIGSLNFLSKLCKVHENPNANIDTKYLESVTKLHTHWIDSQKAITTNETNNTNTQV Sbjct: 121 TLKKIIGSLNFLSKLCKVHENPNANIDTKYLESVTKLHTHWIDSQKAITTNETNNTNTQV 180 Query: 181 LCPPLLKVSLNLWNPETNHLSEKFFKTCSEKLRFLVDFQLRSYLNLSFEERSKIRFGSLK 240 LCPPLLKVSLNLWNPETNHLSEKFFKTCSEKLRFLVDFQLRSYLNLSFEERSKIRFGSLK Sbjct: 181 LCPPLLKVSLNLWNPETNHLSEKFFKTCSEKLRFLVDFQLRSYLNLSFEERSKIRFGSLK 240 Query: 241 LGKRDRDAIIYHKVTHSAEKKDTPGHHQLLALLPQDCPFICPQTTLAAYLYLRFYGIPSV 300 LGKRDRDAIIYHKVTHSAEKKDTPGHHQLLALLPQDCPFICPQTTLAAYLYLRFYGIPSV Sbjct: 241 LGKRDRDAIIYHKVTHSAEKKDTPGHHQLLALLPQDCPFICPQTTLAAYLYLRFYGIPSV 300 Query: 301 SKGDGFPNLNADENGSLLQDIPILRGKSLTTYPREETFSNYYTTVFRYCHLPYKRREYFN 360 SKGDGFPNLNADENGSLLQDIPILRGKSLTTYPREETFSNYYTTVFRYCHLPYKRREYFN Sbjct: 301 SKGDGFPNLNADENGSLLQDIPILRGKSLTTYPREETFSNYYTTVFRYCHLPYKRREYFN 360 Query: 361 KCNLVYPTWDEDTFRTFFNEENHGNWLEQPEAFAFPDKIPFDFKKIMNFKSPYTSYSTNA 420 KCNLVYPTWDEDTFRTFFNEENHGNWLEQPEAFAFPDKIPFDFKKIMNFKSPYTSYSTNA Sbjct: 361 KCNLVYPTWDEDTFRTFFNEENHGNWLEQPEAFAFPDKIPFDFKKIMNFKSPYTSYSTNA 420 Query: 421 KKDPFPPPKDLLVQIFPEIDEYKRHDYEGLSQNSRDFLDLMEVLRERFLSNLPWIYKFFP 480 KKDPFPPPKDLLVQIFPEIDEYKRHDYEGLSQNSRDFLDLMEVLRERFLSNLPWIYKFFP Sbjct: 421 KKDPFPPPKDLLVQIFPEIDEYKRHDYEGLSQNSRDFLDLMEVLRERFLSNLPWIYKFFP 480 Query: 481 NHDIFQDPIFGNSDFQSYFNDKTIHSKGSPILSFDILPGFNKIYKNKTNFYSLLIERPSQ 540 NHDIFQDPIFGNSDFQSYFNDKTIHSKGSPILSFDILPGFNKIYKNKTNFYSLLIERPSQ Sbjct: 481 NHDIFQDPIFGNSDFQSYFNDKTIHSKGSPILSFDILPGFNKIYKNKTNFYSLLIERPSQ 540 Query: 541 LTFASSHNPDTHPTQKQESEGPLQMSQLDTTQLNELLKQQSFEYVQFQTLSNFQILLSVF 600 LTFASSHNPDTHPTQKQESEGPLQMSQLDTTQLNELLKQQSFEYVQFQTLSNFQILLSVF Sbjct: 541 LTFASSHNPDTHPTQKQESEGPLQMSQLDTTQLNELLKQQSFEYVQFQTLSNFQILLSVF 600 Query: 601 NKIFEKLEMKKSSRGYILHQLNLFKITLDERIKKSKIDDADKFIRDNQPIKKEENIVNED 660 NKIFEKLEMKKSSRGYILHQLNLFKITLDERIKKSKIDDADKFIRDNQPIKKEENIVNED Sbjct: 601 NKIFEKLEMKKSSRGYILHQLNLFKITLDERIKKSKIDDADKFIRDNQPIKKEENIVNED 660 Query: 661 GPNTSRRTKRPKQIRLLSIADSSDESSTEDSNVFKKDGESIEDGAYGENEDENDSEMQEQ 720 GPNTSRRTKRPKQIRLLSIADSSDESSTEDSNVFKKDGESIEDGAYGENEDENDSEMQEQ Sbjct: 661 GPNTSRRTKRPKQIRLLSIADSSDESSTEDSNVFKKDGESIEDGAYGENEDENDSEMQEQ 720 Query: 721 LKSMINELINSKISTFLRDQMDQFELKINALLDKILEEKVTRIIEQKLGSHTGKFSTLKR 780 LKSMINELINSKISTFLRDQMDQFELKINALLDKILEEKVTRIIEQKLGSHTGKFSTLKR Sbjct: 721 LKSMINELINSKISTFLRDQMDQFELKINALLDKILEEKVTRIIEQKLGSHTGKFSTLKR 780 Query: 781 PQLYMTEEHNVGFDMEVPKKLRTSGKYAETVKDNDDHQAMSTTASPSPEQDQEAKSYTDE 840 PQLYMTEEHNVGFDMEVPKKLRTSGKYAETVKDNDDHQAMSTTASPSPEQDQEAKSYTDE Sbjct: 781 PQLYMTEEHNVGFDMEVPKKLRTSGKYAETVKDNDDHQAMSTTASPSPEQDQEAKSYTDE 840 Query: 841 QEFMLDKSIDSIEGIILEWFTPNAKYANQCVHSMNKSGNKSWRANCEALYKERKSIVEFY 900 QEFMLDKSIDSIEGIILEWFTPNAKYANQCVHSMNKSGNKSWRANCEALYKERKSIVEFY Sbjct: 841 QEFMLDKSIDSIEGIILEWFTPNAKYANQCVHSMNKSGNKSWRANCEALYKERKSIVEFY 900 Query: 901 IYLVNHESLDRYKAVDICEKLRDQNEGSFSRLAKFLRKWRHDHQNSFDGLLVYLSN 956 IYLVNHESLDRYKAVDICEKLRDQNEGSFSRLAKFLRKWRHDHQNSFDGLLVYLSN Sbjct: 901 IYLVNHESLDRYKAVDICEKLRDQNEGSFSRLAKFLRKWRHDHQNSFDGLLVYLSN 956 >4UOP-A nrPDB Length = 442 Score = 37.0 bits (84), Expect = 0.041, Method: Composition-based stats. Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 28/120 (23%) Query: 477 KFFP--NHDIFQD-PIFGNSDFQSYF-NDKTIHSKGSPILSFDILPGFNKIYKNKTNFYS 532 +F+P D F D FG+ D + +D+ +++K PIL + YKN FY Sbjct: 165 EFYPAVGFDKFYDRKFFGDEDVIGFSPSDEVLYNKAFPILE--------EQYKNNQKFY- 215 Query: 533 LLIERPSQLTFASSHNPDTHPTQKQESEGPLQMSQLDTTQLNELLK------QQSFEYVQ 586 +QL SSH P P KQE + P S L T+L + +Q E++Q Sbjct: 216 ------AQLISVSSHMPFDIPKDKQEIDLP---SDLKDTELGNYFEAVHYADKQLGEFIQ 266 >1FM4-A nrPDB Length = 159 Score = 35.0 bits (79), Expect = 0.16, Method: Composition-based stats. Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 5/90 (5%) Query: 631 RIKKSKIDDADKFIRDNQP--IKKEENIVNEDGPNTSRRTKRPKQIRLLSIADSSDESST 688 R+ K+ I D DK + P I ENI GP T ++ P+ + D DE Sbjct: 17 RMFKAFILDGDKLVPKVAPQAISSVENIEGNGGPGTIKKINFPEGFPFKYVKDRVDEV-- 74 Query: 689 EDSNVFKKDGESIEDGAYGENEDENDSEMQ 718 D FK + IE G G+ ++ +E++ Sbjct: 75 -DHTNFKYNYSVIEGGPVGDTLEKISNEIK 103 >4YZR-A nrPDB Length = 405 Score = 33.9 bits (76), Expect = 0.32, Method: Composition-based stats. Identities = 27/132 (20%), Positives = 59/132 (44%), Gaps = 15/132 (11%) Query: 635 SKIDDADKFIRDNQPIKKEENIVNEDGP---NTSR----------RTKRPKQIRLLSIAD 681 ++ DD F++DN+ + +N++N++ N S P RL S+ Sbjct: 48 TRYDDCMAFLKDNRITRDVKNVMNQEQIKMLNVSEDIDFVSDHMLAKDTPDHTRLRSLVH 107 Query: 682 SSDESSTEDSNVFKKDGESIEDGAYGENEDENDSEMQEQLKSMINELINSKISTFLRDQM 741 + T ++ + E I + E E EN +++ + S + ++ S++ ++ Sbjct: 108 QAFTPRTIEN--LRGSIEQIAEQLLDEMEKENKADIMKSFASPLPFIVISELMGIPKEDR 165 Query: 742 DQFELKINALLD 753 QF++ NA++D Sbjct: 166 SQFQIWTNAMVD 177 >6A83-A nrPDB Length = 394 Score = 33.1 bits (74), Expect = 0.60, Method: Composition-based stats. Identities = 34/136 (25%), Positives = 58/136 (42%), Gaps = 30/136 (22%) Query: 517 LPGFNKIYKNKTNFYSLLIERP-------SQLTFASSHNPDTHPTQKQESEGPLQMSQLD 569 L +K N T F +++ RP LTFA+ NPD + TQ Sbjct: 82 LDALHKTDPNLTVFNNVVTSRPYTIEILQQALTFANEKNPDLYLTQP------------- 128 Query: 570 TTQLNELLKQ---QSFEYVQFQTLSNFQILLSVFNKIFEK-----LEMKKSSRGYILHQL 621 L ++KQ ++F QT++ +L+VF++ +K + +S+R Y + L Sbjct: 129 --SLMNMMKQAGYKTFWITNQQTMTARNTMLTVFSRQTDKQYYMNQQRTQSAREYDTNVL 186 Query: 622 NLFKITLDERIKKSKI 637 F+ L++ K I Sbjct: 187 KPFQEVLNDPAPKKLI 202 >4BKC-A nrPDB Length = 159 Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 5/90 (5%) Query: 631 RIKKSKIDDADKFIRDNQP--IKKEENIVNEDGPNTSRRTKRPKQIRLLSIADSSDESST 688 R+ K+ I D D P I ENI GP T ++ P+ + D DE Sbjct: 17 RLFKAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPEGFPFKYVKDRVDEV-- 74 Query: 689 EDSNVFKKDGESIEDGAYGENEDENDSEMQ 718 D FK + IE G G+ ++ +E++ Sbjct: 75 -DHTNFKYNYSVIEGGPIGDTLEKISNEIK 103 >5YH8-A nrPDB Length = 510 Score = 31.6 bits (70), Expect = 1.9, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 68/161 (42%), Gaps = 15/161 (9%) Query: 568 LDTTQLNELLKQQSFEYVQFQTLSNFQILLSVFNKIFEKLEMKKSSRGYILHQLNLFKIT 627 LD L +L ++ + Q ++ ++++ K + K+ R I H +N Sbjct: 233 LDKDSLKQLKDTGDYQVKRSQPMNTKMLVVNSGKK--DNAVSDKTVRQAIGHMVN----- 285 Query: 628 LDERIKKSKIDDADKFIRDNQPIKKEENIVNEDGPNTSRRTKRPKQIRLLSIADSSDESS 687 ++I K +D +K Q K +N D P K+ + S+ D + Sbjct: 286 -RDKIAKEILDGQEK--PATQLFAKNVTDINFDMPTRKYDLKKAE-----SLLDEAGWKK 337 Query: 688 TEDSNVFKKDGESIEDGAYGENEDENDSEMQEQLKSMINEL 728 +DS+V +KDG+++E Y + + E E L++ ++ Sbjct: 338 GKDSDVRQKDGKNLEMAMYYDKGSSSQKEQAEYLQAEFKKM 378 >4KZG-A nrPDB Length = 327 Score = 31.2 bits (69), Expect = 2.3, Method: Composition-based stats. Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 11/99 (11%) Query: 676 LLSIADSSDESSTEDSNVFKKDGESIEDGAYGENEDENDSEMQEQLKSMINELINSK-IS 734 +L D SD+ + + S K S+++ YG NE E +E QL EL NS +S Sbjct: 18 ILEKQDISDKKAEKASEEVSKSLLSMKEILYGTNEKEPQTEAVAQLA---QELYNSGLLS 74 Query: 735 TFLRD-QMDQFELKINALLDKILEEKVTRIIEQKLGSHT 772 T + D Q+ FE K K + + I+ +++G+ T Sbjct: 75 TLVADLQLIDFEGK------KDVAQIFNDILRRQIGTRT 107 >5KBF-A nrPDB Length = 301 Score = 30.8 bits (68), Expect = 3.0, Method: Composition-based stats. Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 15/133 (11%) Query: 700 SIEDGAYGENEDENDS------EMQEQLKSMINELINSKISTFLRDQMD--QFELKINAL 751 S+ AYG+ + D+ + E+ K+ I E +N +FL + ++ +FE+ +NA Sbjct: 9 SVSAEAYGDWNKKIDNFIPKVYKKDEKEKAKIREALNE---SFLFNHLNKKEFEIIVNAF 65 Query: 752 LDKILEEKVTRIIEQKLGSHTGKFSTLKRPQLYMTEEHNVGFDMEVPKKLRTSGKYAETV 811 DK +E+ V I E G ++Y T+E+N EV L++ + E Sbjct: 66 FDKNVEKGVNIINEGDYGDLLYVIDQ-GEVEIYKTKENN---KKEVLTVLKSKDVFGELA 121 Query: 812 KDNDDHQAMSTTA 824 + +A + TA Sbjct: 122 LLYNSKRAATATA 134 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.316 0.134 0.391 Lambda K H 0.267 0.0416 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,026,328 Number of Sequences: 36641 Number of extensions: 1705773 Number of successful extensions: 4255 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 35 Number of HSP's that attempted gapping in prelim test: 4220 Number of HSP's gapped (non-prelim): 72 length of query: 956 length of database: 10,336,785 effective HSP length: 106 effective length of query: 850 effective length of database: 6,452,839 effective search space: 5484913150 effective search space used: 5484913150 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 64 (29.2 bits)