BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P32455 (592 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1F5N-A nrPDB 1221 0.0 2D4H-A nrPDB 676 0.0 3QOF-A nrPDB 59 5e-09 5VGR-A nrPDB 56 4e-08 3X1D-A nrPDB 55 7e-08 6B9G-B nrPDB 48 1e-05 5CA8-A nrPDB 39 0.004 2I1J-A nrPDB 33 0.44 5DZ6-A nrPDB 33 0.44 3CNO-A nrPDB 33 0.46 6FO1-G nrPDB 31 1.5 2FTZ-A nrPDB 31 1.6 6G12-A nrPDB 30 2.6 6MSN-A nrPDB 30 2.9 3R9W-A nrPDB 29 4.8 1MKY-A nrPDB 28 7.9 >1F5N-A nrPDB Length = 592 Score = 1221 bits (3159), Expect = 0.0, Method: Compositional matrix adjust. Identities = 589/592 (99%), Positives = 590/592 (99%) Query: 1 MASEIHMTGPMCLIENTNGRLMANPEALKILSAITQPMVVVAIVGLYRTGKSYLMNKLAG 60 MASEIHMTGPMCLIENTNGRLMANPEALKILSAITQPMVVVAIVGLYRTGKSYLMNKLAG Sbjct: 1 MASEIHMTGPMCLIENTNGRLMANPEALKILSAITQPMVVVAIVGLYRTGKSYLMNKLAG 60 Query: 61 KKKGFSLGSTVQSHTKGIWMWCVPHPKKPGHILVLLDTEGLGDVEKGDNQNDSWIFALAV 120 KKKGFSLGSTVQSHTKGIWMWCVPHPKKPGHILVLLDTEGLGDVEKGDNQNDSWIFALAV Sbjct: 61 KKKGFSLGSTVQSHTKGIWMWCVPHPKKPGHILVLLDTEGLGDVEKGDNQNDSWIFALAV 120 Query: 121 LLSSTFVYNSIGTINQQAMDQLYYVTELTHRIRSKSSPDENENEVEDSADFVSFFPDFVW 180 LLSSTFVYNSIGTINQQAMDQLYYVTELTHRIRSKSSPDENENEVEDSADFVSFFPDFVW Sbjct: 121 LLSSTFVYNSIGTINQQAMDQLYYVTELTHRIRSKSSPDENENEVEDSADFVSFFPDFVW 180 Query: 181 TLRDFSLDLEADGQPLTPDEYLTYSLKLKKGTSQKDETFNLPRLCIRKFFPKKKCFVFDR 240 TLRDFSLDLEADGQPLTPDEYLTYSLKLKKGTSQKDETFNLPRLCIRKFFPKKKCFVFDR Sbjct: 181 TLRDFSLDLEADGQPLTPDEYLTYSLKLKKGTSQKDETFNLPRLCIRKFFPKKKCFVFDR 240 Query: 241 PVHRRKLAQLEKLQDEELDPEFVQQVADFCSYIFSNSKTKTLSGGIQVNGPRLESLVLTY 300 PVHRRKLAQLEKLQDEELDPEFVQQVADFCSYIFSNSKTKTLSGGIQVNGPRLESLVLTY Sbjct: 241 PVHRRKLAQLEKLQDEELDPEFVQQVADFCSYIFSNSKTKTLSGGIQVNGPRLESLVLTY 300 Query: 301 VNAISSGDLPCMENAVLALAQIENSAAVQKAIAHYEQQMGQKVQLPTETLQELLDLHRDS 360 VNAISSGDLPCMENAVLALAQIENSAAVQKAIAHYEQQMGQKVQLPTE+LQELLDLHRDS Sbjct: 301 VNAISSGDLPCMENAVLALAQIENSAAVQKAIAHYEQQMGQKVQLPTESLQELLDLHRDS 360 Query: 361 EREAIEVFIRSSFKDVDHLFQKELAAQLEKKRDDFCKQNQEASSDRCSALLQVIFSPLEE 420 EREAIEVFIRSSFKDVDHLFQKELAAQLEKKRDDFCKQNQEASSDRCS LLQVIFSPLEE Sbjct: 361 EREAIEVFIRSSFKDVDHLFQKELAAQLEKKRDDFCKQNQEASSDRCSGLLQVIFSPLEE 420 Query: 421 EVKAGIYSKPGGYRLFVQKLQDLKKKYYEEPRKGIQAEEILQTYLKSKESMTDAILQTDQ 480 EVKAGIYSKPGGYRLFVQKLQDLKKKYYEEPRKGIQAEEILQTYLKSKESMTDAILQTDQ Sbjct: 421 EVKAGIYSKPGGYRLFVQKLQDLKKKYYEEPRKGIQAEEILQTYLKSKESMTDAILQTDQ 480 Query: 481 TLTEKEKEIEVERVKAESAQASAKMLQEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRV 540 TLTEKEKEIEVERVKAESAQASAKML EMQRKNEQMMEQKERSYQEHLKQLTEKMENDRV Sbjct: 481 TLTEKEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRV 540 Query: 541 QLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQDLQTKMRRRKACTIS 592 QLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQDLQTKMRRRKACTIS Sbjct: 541 QLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQDLQTKMRRRKACTIS 592 >2D4H-A nrPDB Length = 328 Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust. Identities = 317/317 (100%), Positives = 317/317 (100%) Query: 1 MASEIHMTGPMCLIENTNGRLMANPEALKILSAITQPMVVVAIVGLYRTGKSYLMNKLAG 60 MASEIHMTGPMCLIENTNGRLMANPEALKILSAITQPMVVVAIVGLYRTGKSYLMNKLAG Sbjct: 12 MASEIHMTGPMCLIENTNGRLMANPEALKILSAITQPMVVVAIVGLYRTGKSYLMNKLAG 71 Query: 61 KKKGFSLGSTVQSHTKGIWMWCVPHPKKPGHILVLLDTEGLGDVEKGDNQNDSWIFALAV 120 KKKGFSLGSTVQSHTKGIWMWCVPHPKKPGHILVLLDTEGLGDVEKGDNQNDSWIFALAV Sbjct: 72 KKKGFSLGSTVQSHTKGIWMWCVPHPKKPGHILVLLDTEGLGDVEKGDNQNDSWIFALAV 131 Query: 121 LLSSTFVYNSIGTINQQAMDQLYYVTELTHRIRSKSSPDENENEVEDSADFVSFFPDFVW 180 LLSSTFVYNSIGTINQQAMDQLYYVTELTHRIRSKSSPDENENEVEDSADFVSFFPDFVW Sbjct: 132 LLSSTFVYNSIGTINQQAMDQLYYVTELTHRIRSKSSPDENENEVEDSADFVSFFPDFVW 191 Query: 181 TLRDFSLDLEADGQPLTPDEYLTYSLKLKKGTSQKDETFNLPRLCIRKFFPKKKCFVFDR 240 TLRDFSLDLEADGQPLTPDEYLTYSLKLKKGTSQKDETFNLPRLCIRKFFPKKKCFVFDR Sbjct: 192 TLRDFSLDLEADGQPLTPDEYLTYSLKLKKGTSQKDETFNLPRLCIRKFFPKKKCFVFDR 251 Query: 241 PVHRRKLAQLEKLQDEELDPEFVQQVADFCSYIFSNSKTKTLSGGIQVNGPRLESLVLTY 300 PVHRRKLAQLEKLQDEELDPEFVQQVADFCSYIFSNSKTKTLSGGIQVNGPRLESLVLTY Sbjct: 252 PVHRRKLAQLEKLQDEELDPEFVQQVADFCSYIFSNSKTKTLSGGIQVNGPRLESLVLTY 311 Query: 301 VNAISSGDLPCMENAVL 317 VNAISSGDLPCMENAVL Sbjct: 312 VNAISSGDLPCMENAVL 328 >3QOF-A nrPDB Length = 459 Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 90/392 (22%), Positives = 159/392 (40%), Gaps = 58/392 (14%) Query: 38 MVVVAIVGLYRTGKSYLMNKL------------AGKKK----GFSLGSTVQSHTKGIWMW 81 +V V++ G +R GKS+LM+ + G GFS + T GI +W Sbjct: 79 VVAVSVAGAFRKGKSFLMDFMLRYMYNQESVDWVGDYNEPLTGFSWRGGSERETTGIQIW 138 Query: 82 C----VPHPKKPGHILVLLDTEGLGDVEKGDNQNDSWIFALAVLLSSTFVYNSIGTINQQ 137 + P ++L+DT+G D + ++ + +FAL+ ++SS VYN + + Sbjct: 139 SEIFLINKPDGKKVAVLLMDTQGTFD-SQSTLRDSATVFALSTMISSIQVYNLSQNVQED 197 Query: 138 AMDQLYYVTELTHRIRSKSSPDENENEVEDSADFVSFFPDFVWTLRDFSLDLE----ADG 193 + L TE ++ F+ F ++ +RD+S E ADG Sbjct: 198 DLQHLQLFTEYGRLAMEET--------------FLKPFQSLIFLVRDWSFPYEFSYGADG 243 Query: 194 QPLTPDEYLTYSLKLKKGTSQKDETFNLPRLCIRKFFPKKKCFVFDRPVHRRKLAQLEKL 253 ++ +LK +Q +E N+ R I F CF+ P + Sbjct: 244 GAKFLEK------RLKVSGNQHEELQNV-RKHIHSCFTNISCFLLPHPGLKVATNPNFDG 296 Query: 254 QDEELDPEFVQQVADFCSYIFS--NSKTKTLSGGIQVNGPRLESLVLTYVNAISSGDLPC 311 + +E+D EF++ + ++ S + K ++G ++ L Y+ +LP Sbjct: 297 KLKEIDDEFIKNLKILIPWLLSPESLDIKEINGN-KITCRGLVEYFKAYIKIYQGEELPH 355 Query: 312 MENAVLALAQIENSAAVQKAIAHYEQQM-----GQKVQLPTETLQELLDLHRDSEREAIE 366 ++ + A A+ N AAV A Y ++M G K L LQ H + E+++ Sbjct: 356 PKSMLQATAEANNLAAVATAKDTYNKKMEEICGGDKPFLAPNDLQT---KHLQLKEESVK 412 Query: 367 VFIRSSFKDVDHLFQKELAAQLEKKRDDFCKQ 398 +F R K F + QLE + D+ Q Sbjct: 413 LF-RGVKKMGGEEFSRRYLQQLESEIDELYIQ 443 >5VGR-A nrPDB Length = 431 Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 99/395 (25%), Positives = 171/395 (43%), Gaps = 55/395 (13%) Query: 38 MVVVAIVGLYRTGKSYLMN---------KLAGKKK----------GFSLGSTVQSHTKGI 78 +VVV++ G +R GKS++++ K +G GFS T GI Sbjct: 40 VVVVSVAGAFRKGKSFILDFMLRYLYSQKESGHSNWLGDPEEPLTGFSWRGGSDPETTGI 99 Query: 79 WMWC-VPHPKKPGH---ILVLLDTEGLGDVEKGDNQNDSWIFALAVLLSSTFVYNSIGTI 134 +W V +KPG +VL+DT+G D + ++ + IFAL+ + SS +YN I Sbjct: 100 QIWSEVFTVEKPGGKKVAVVLMDTQGAFD-SQSTVKDCATIFALSTMTSSVQIYNLSQNI 158 Query: 135 NQQAMDQLYYVTELTHRIRSKSSPDENENEVEDSADFVSFFPDFVWTLRDFSLDLEADGQ 194 + + QL TE + + DE F F ++ +RD+S E Sbjct: 159 QEDDLQQLQLFTEY-----GRLAMDEI---------FQKPFQTLMFLVRDWSFPYEYSYG 204 Query: 195 PLTPDEYLTYSLKLKKGTSQKDETFNLPRLCIRKFFPKKKCFVFDRPVHRRKLAQLEKLQ 254 +L L++K+ Q +E N+ R I F CF+ P + + + Sbjct: 205 LQGGMAFLDKRLQVKE--HQHEEIQNV-RNHIHSCFSDVTCFLLPHPGLQVATSPDFDGK 261 Query: 255 DEELDPEFVQQVADFCSYIFSNSKT--KTLSGGIQVNGPRLESLVLTYVNAISSGDLPCM 312 +++ EF +Q+ Y+ + SK K ++G +V L Y+ DLP Sbjct: 262 LKDIAGEFKEQLQALIPYVLNPSKLMEKEINGS-KVTCRGLLEYFKAYIKIYQGEDLPHP 320 Query: 313 ENAVLALAQIENSAAVQKAIAHYEQQM-----GQKVQLPTETLQELLDLHRDSEREAIEV 367 ++ + A A+ N AA A Y M G+K L + L+E H + ++ A++ Sbjct: 321 KSMLQATAEANNLAAAASAKDIYYNNMEEVCGGEKPYLSPDILEE---KHCEFKQLALDH 377 Query: 368 FIRS---SFKDVDHLFQKELAAQLEKKRDDFCKQN 399 F ++ KD +Q+EL ++++ ++FCK N Sbjct: 378 FKKTKKMGGKDFSFRYQQELEEEIKELYENFCKHN 412 >3X1D-A nrPDB Length = 541 Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 84/347 (24%), Positives = 139/347 (40%), Gaps = 54/347 (15%) Query: 38 MVVVAIVGLYRTGKSYLMN-----------------KLAGKK---KGFSLGSTVQSHTKG 77 + VV++ G +R GKS+L++ L G+ +GFS + T G Sbjct: 38 VCVVSVAGAFRKGKSFLLDFFLRYMYSKYVHHDATDWLGGESDPLEGFSWRGGSERDTTG 97 Query: 78 IWMWC----VPHPKKPGHILVLLDTEGLGDVEKGDNQNDSWIFALAVLLSSTFVYNSIGT 133 I MW +P ++LLDT+G D + ++ + +FAL+ +LSS +YN Sbjct: 98 ILMWSDIFLHDYPNGDKIAIILLDTQGAFD-SQSTVRDCATVFALSTMLSSVQIYNLSQN 156 Query: 134 INQQAMDQLYYVTELTHRIRSKSSPDENENEVEDSADFVSFFPDFVWTLRDFSLDLEADG 193 I + + L TE + + F + +RD+S EA+ Sbjct: 157 IQEDDLQHLQLFTEYGRLALADTGKKP--------------FQRLQFLVRDWSFPYEAEY 202 Query: 194 QPLTPDEYLTYSLKLKKGTSQKDETFNLPRLCIRKFFPKKKCFVFDRPVHRRKLAQLEKL 253 L D+ L L++ Q E +L R I F + CF+ P +A K Sbjct: 203 GALGGDKILKRRLEVSD--KQHPELQSLRR-HISSCFTEVACFLMPHP--GLNVATNPKF 257 Query: 254 QD--EELDPEFVQQVADFCSYIFS--NSKTKTLSGGIQVNGPRLESLVLTYVNAISSGDL 309 +++ PEF + + + N K +SG +V L +Y+N +L Sbjct: 258 DGRLQDITPEFKSSLRSLVPMLLAPDNLVYKEISGQ-RVRARDLIQYFQSYMNIYKGNEL 316 Query: 310 PCMENAVLALAQIENSAAVQKAIAHYEQQM-----GQKVQLPTETLQ 351 P ++ ++A A+ + AV A Y Q M G + L T LQ Sbjct: 317 PEPKSMLVATAEANHLTAVAAAKELYGQLMEEVCGGTRPYLSTAHLQ 363 >6B9G-B nrPDB Length = 340 Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 59/262 (22%), Positives = 107/262 (40%), Gaps = 46/262 (17%) Query: 38 MVVVAIVGLYRTGKSYLMNKL------------AGKKK----GFSLGSTVQSHTKGIWMW 81 +V V++ G +R GKS+LM+ + G GFS + T GI +W Sbjct: 68 VVAVSVAGAFRKGKSFLMDFMLRYMYNQESVDWVGDYNEPLTGFSWRGGSERETTGIQIW 127 Query: 82 C----VPHPKKPGHILVLLDTEGLGDVEKGDNQNDSWIFALAVLLSSTFVYNSIGTINQQ 137 + P ++L+DT+G D + ++ + +FAL+ ++SS VYN + + Sbjct: 128 SEIFLINKPDGKKVAVLLMDTQGTFD-SQSTLRDSATVFALSTMISSIQVYNLSQNVQED 186 Query: 138 AMDQLYYVTELTHRIRSKSSPDENENEVEDSADFVSFFPDFVWTLRDFSLDLE----ADG 193 + L TE ++ F+ F ++ +RD+S E ADG Sbjct: 187 DLQHLQLFTEYGRLAMEET--------------FLKPFQSLIFLVRDWSFPYEFSYGADG 232 Query: 194 QPLTPDEYLTYSLKLKKGTSQKDETFNLPRLCIRKFFPKKKCFVFDRPVHRRKLAQLEKL 253 ++ +LK +Q +E N+ R I F CF+ P + Sbjct: 233 GAKFLEK------RLKVSGNQHEELQNV-RKHIHSCFTNISCFLLPHPGLKVATNPNFDG 285 Query: 254 QDEELDPEFVQQVADFCSYIFS 275 + +E+D EF++ + ++ S Sbjct: 286 KLKEIDDEFIKNLKILIPWLLS 307 >5CA8-A nrPDB Length = 692 Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 11/90 (12%) Query: 40 VVAIVGLYRTGKSYLMNKLAGKKKGFSLGSTVQSHTKGIWMWCVP-------HPKKPGHI 92 ++++ G TGKS L+N+L Q TKGIW+ P H +I Sbjct: 60 IISVFGSQSTGKSTLLNRLFNTNFDVMDELNRQQTTKGIWLAYSPVVSTTLGHTTSKSNI 119 Query: 93 LVLLDTEGLGDVEKGDNQN---DSWIFALA 119 LV +D EG E+G++Q+ + +FAL+ Sbjct: 120 LV-MDVEGTDGRERGEDQDFERKAALFALS 148 >2I1J-A nrPDB Length = 575 Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 63/102 (61%), Gaps = 12/102 (11%) Query: 489 IEVERVKAESAQASAKMLQEMQRKNEQM-------MEQKERSYQEHLKQLTEKMENDRVQ 541 I+V+++KA++ + K+ ++ QR+ Q+ E+K++ YQ+ L+Q+ E+ME + Sbjct: 300 IDVQQMKAQAREE--KLAKQAQREKLQLEIAARERAEKKQQEYQDRLRQMQEEMERSQAN 357 Query: 542 LLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQDLQTKM 583 LL+ Q+ + L+L+EQ + L + ++E +NE+Q + ++ Sbjct: 358 LLEAQD--MILRLEEQLRQL-QAAKEELEQRQNELQAMMQRL 396 >5DZ6-A nrPDB Length = 288 Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust. Identities = 55/242 (22%), Positives = 101/242 (41%), Gaps = 30/242 (12%) Query: 207 KLKKGTSQKDET--FNLPRLCIRKFFPKKKCFVFDRPVHR--RKLAQLEKLQDEELDPEF 262 + K+ T Q DE +++ RLC+ + F +P L+ L+K++DEE+ P+F Sbjct: 23 EFKELTDQADEILGYSIKRLCLENPYSNLNKTQFTQPALYVVNALSYLKKIRDEEVKPDF 82 Query: 263 V--QQVADFCSYIFSNSKTKTLSGGIQVNGPRLESLVLTYVNAISSGDLPCMENAVLALA 320 V + ++ + +F+ ++ G+Q+ R E + L IS+G + AV+ L Sbjct: 83 VAGHSLGEYNA-LFA-AEAFDFETGLQLVRKRGELMSL-----ISNGGMA----AVMGL- 130 Query: 321 QIENSAAVQKAIAHYEQQMGQKVQLPTETLQELLDLHRDSEREAIEVFIRSSFKDVDHLF 380 N V KA+ Y + Q ++ +D +A +F + +V + Sbjct: 131 ---NEEQVAKALKEYHLH-DVDIANVNAPYQIVISGKKDEIEKAASLF--ETMTEVTMVL 184 Query: 381 QKELAAQLEKKRDDFCKQNQEASSDRCSALLQVIFSPLEEEVKAGIYSKPGGYRLFVQKL 440 ++ + + K+ E L FSP V + +Y+KP Y Q L Sbjct: 185 PLNVSGAFHSRYMNKAKEEFE------EFLHAFYFSPPSIPVISNVYAKPYTYEFMKQTL 238 Query: 441 QD 442 D Sbjct: 239 AD 240 >3CNO-A nrPDB Length = 262 Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 8/61 (13%) Query: 41 VAIVGLYRTGKSYLMNKLAGKKKGFSLGSTVQSHTKGIWMWCVPHPKKPGHILVLLDTEG 100 V IVG+ TGKS ++NKL GK+ S+G+ TKGI + + + K +LDT G Sbjct: 102 VLIVGVPNTGKSTIINKLKGKRAS-SVGAQ-PGITKGIQWFSLENGVK------ILDTPG 153 Query: 101 L 101 + Sbjct: 154 I 154 >6FO1-G nrPDB Length = 665 Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust. Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 26/152 (17%) Query: 427 YSKPGGYRLFVQKLQDLKKKYYEEPRKGIQAEEILQTYLKSKESMTDAILQTDQTLTEKE 486 YS+ G R +QKL++ KK Y E +L+ + E+ T+ + + Q L KE Sbjct: 204 YSRRGAARFALQKLEEAKKDY----------ERVLELEPNNFEA-TNELRKISQALASKE 252 Query: 487 -----------KEIEVERVKAESAQASAKMLQEMQRKNEQMMEQKERSYQEHLKQLTEKM 535 K E ER + E+ Q + + E R N KE Y+ ++ T + Sbjct: 253 NSYPKEADIVIKSTEGERKQIEAQQNKQQAISEKDRGNGFF---KEGKYERAIECYTRGI 309 Query: 536 ENDRVQLLKEQERTLA-LKLQEQEQLLKEGFQ 566 D L R +A LK+Q+ E+ K+ Q Sbjct: 310 AADGANALLPANRAMAYLKIQKYEEAEKDCTQ 341 >2FTZ-A nrPDB Length = 284 Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust. Identities = 14/33 (42%), Positives = 22/33 (66%) Query: 437 VQKLQDLKKKYYEEPRKGIQAEEILQTYLKSKE 469 +QK +++ KYYEE KGI++E + +T KE Sbjct: 244 IQKAREMADKYYEEVLKGIESEGLFRTLFLLKE 276 >6G12-A nrPDB Length = 301 Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 14/62 (22%) Query: 43 IVGLYRTGKSYLMNKLAGK---KKGFSLGSTVQSHTKGIWMWCVPHPKKPGHILVLLDTE 99 IVG+ GKS L+NKLA + + G G T Q W+ K G+ L LLDT Sbjct: 132 IVGIPNVGKSTLINKLAKRSIAQTGNKPGVTKQQQ----WI-------KVGNALQLLDTP 180 Query: 100 GL 101 G+ Sbjct: 181 GI 182 >6MSN-A nrPDB Length = 604 Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust. Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 3/75 (4%) Query: 312 MENAVLALAQIENSAAVQKAIAHYEQQMGQKVQLPTETLQELLDLHRDSER---EAIEVF 368 +E+A A SA Q H+ Q KV+ + ++E+ R + + EA+ + Sbjct: 55 IEDASAVNADFHFSAIFQPTDPHHHQTEFAKVEGSEKYVEEVEVFGRQALKVNPEALTIL 114 Query: 369 IRSSFKDVDHLFQKE 383 +F DV H F+K+ Sbjct: 115 AHRAFSDVHHFFRKD 129 >3R9W-A nrPDB Length = 307 Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust. Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 4/75 (5%) Query: 41 VAIVGLYRTGKSYLMNKLAGKKKGFSLGSTVQSHTKGIWMWCVPHPKKPGHILVLLDTEG 100 VAIVG GKS L+N L G K + + + + +P+ + ++ LDT G Sbjct: 12 VAIVGKPNVGKSTLLNNLLGTKVSIISPKAGTTRMRVLGVKNIPNEAQ----IIFLDTPG 67 Query: 101 LGDVEKGDNQNDSWI 115 + + +K D S + Sbjct: 68 IYEPKKSDVLGHSMV 82 >1MKY-A nrPDB Length = 439 Score = 28.5 bits (62), Expect = 7.9, Method: Compositional matrix adjust. Identities = 15/27 (55%), Positives = 15/27 (55%) Query: 38 MVVVAIVGLYRTGKSYLMNKLAGKKKG 64 M V IVG GKS L NKL KKK Sbjct: 1 MATVLIVGRPNVGKSTLFNKLVKKKKA 27 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1F5N-A nrPDB 944 0.0 2D4H-A nrPDB 519 e-147 3QOF-A nrPDB 452 e-127 3X1D-A nrPDB 431 e-121 5VGR-A nrPDB 424 e-119 6B9G-B nrPDB 353 1e-97 Sequences not found previously or not previously below threshold: 2I1J-A nrPDB 45 1e-04 4RM9-A nrPDB 37 0.021 4QCC-A nrPDB 37 0.023 6FO1-G nrPDB 37 0.025 5CA8-A nrPDB 36 0.042 3A8P-A nrPDB 34 0.13 3AGK-A nrPDB 34 0.19 1Y1U-A nrPDB 34 0.20 6OJ5-A nrPDB 33 0.31 5TQX-A nrPDB 33 0.31 5YZ0-C nrPDB 33 0.33 3JAX-A nrPDB 33 0.36 2FTZ-A nrPDB 32 0.56 5AMO-A nrPDB 32 0.73 5M6U-B nrPDB 32 0.91 5DK4-A nrPDB 31 1.1 5JQE-A nrPDB 31 1.2 5U2G-A nrPDB 31 1.2 3KZ4-A nrPDB 31 1.3 5OOL-q nrPDB 31 1.7 4CT9-A nrPDB 31 1.7 4KIK-B nrPDB 30 1.9 2XV4-S nrPDB 30 1.9 2O94-A nrPDB 30 2.0 5G5P-A nrPDB 30 2.8 2DM9-A nrPDB 30 3.1 2L7B-A nrPDB 30 3.2 2EFL-A nrPDB 30 3.7 6FKI-E nrPDB 30 3.9 4KV9-A nrPDB 30 3.9 6EM5-I nrPDB 29 4.3 3K2S-A nrPDB 29 5.8 3R2P-A nrPDB 29 6.5 3U1V-A nrPDB 29 6.7 5EXR-B nrPDB 29 7.1 2JAQ-A nrPDB 29 7.1 4B2T-H nrPDB 29 7.7 5FMG-D nrPDB 29 8.4 5MSN-A nrPDB 29 8.9 4BPX-B nrPDB 28 9.4 3Q5R-A nrPDB 28 10.0 >1F5N-A nrPDB Length = 592 Score = 944 bits (2440), Expect = 0.0, Method: Composition-based stats. Identities = 589/592 (99%), Positives = 590/592 (99%) Query: 1 MASEIHMTGPMCLIENTNGRLMANPEALKILSAITQPMVVVAIVGLYRTGKSYLMNKLAG 60 MASEIHMTGPMCLIENTNGRLMANPEALKILSAITQPMVVVAIVGLYRTGKSYLMNKLAG Sbjct: 1 MASEIHMTGPMCLIENTNGRLMANPEALKILSAITQPMVVVAIVGLYRTGKSYLMNKLAG 60 Query: 61 KKKGFSLGSTVQSHTKGIWMWCVPHPKKPGHILVLLDTEGLGDVEKGDNQNDSWIFALAV 120 KKKGFSLGSTVQSHTKGIWMWCVPHPKKPGHILVLLDTEGLGDVEKGDNQNDSWIFALAV Sbjct: 61 KKKGFSLGSTVQSHTKGIWMWCVPHPKKPGHILVLLDTEGLGDVEKGDNQNDSWIFALAV 120 Query: 121 LLSSTFVYNSIGTINQQAMDQLYYVTELTHRIRSKSSPDENENEVEDSADFVSFFPDFVW 180 LLSSTFVYNSIGTINQQAMDQLYYVTELTHRIRSKSSPDENENEVEDSADFVSFFPDFVW Sbjct: 121 LLSSTFVYNSIGTINQQAMDQLYYVTELTHRIRSKSSPDENENEVEDSADFVSFFPDFVW 180 Query: 181 TLRDFSLDLEADGQPLTPDEYLTYSLKLKKGTSQKDETFNLPRLCIRKFFPKKKCFVFDR 240 TLRDFSLDLEADGQPLTPDEYLTYSLKLKKGTSQKDETFNLPRLCIRKFFPKKKCFVFDR Sbjct: 181 TLRDFSLDLEADGQPLTPDEYLTYSLKLKKGTSQKDETFNLPRLCIRKFFPKKKCFVFDR 240 Query: 241 PVHRRKLAQLEKLQDEELDPEFVQQVADFCSYIFSNSKTKTLSGGIQVNGPRLESLVLTY 300 PVHRRKLAQLEKLQDEELDPEFVQQVADFCSYIFSNSKTKTLSGGIQVNGPRLESLVLTY Sbjct: 241 PVHRRKLAQLEKLQDEELDPEFVQQVADFCSYIFSNSKTKTLSGGIQVNGPRLESLVLTY 300 Query: 301 VNAISSGDLPCMENAVLALAQIENSAAVQKAIAHYEQQMGQKVQLPTETLQELLDLHRDS 360 VNAISSGDLPCMENAVLALAQIENSAAVQKAIAHYEQQMGQKVQLPTE+LQELLDLHRDS Sbjct: 301 VNAISSGDLPCMENAVLALAQIENSAAVQKAIAHYEQQMGQKVQLPTESLQELLDLHRDS 360 Query: 361 EREAIEVFIRSSFKDVDHLFQKELAAQLEKKRDDFCKQNQEASSDRCSALLQVIFSPLEE 420 EREAIEVFIRSSFKDVDHLFQKELAAQLEKKRDDFCKQNQEASSDRCS LLQVIFSPLEE Sbjct: 361 EREAIEVFIRSSFKDVDHLFQKELAAQLEKKRDDFCKQNQEASSDRCSGLLQVIFSPLEE 420 Query: 421 EVKAGIYSKPGGYRLFVQKLQDLKKKYYEEPRKGIQAEEILQTYLKSKESMTDAILQTDQ 480 EVKAGIYSKPGGYRLFVQKLQDLKKKYYEEPRKGIQAEEILQTYLKSKESMTDAILQTDQ Sbjct: 421 EVKAGIYSKPGGYRLFVQKLQDLKKKYYEEPRKGIQAEEILQTYLKSKESMTDAILQTDQ 480 Query: 481 TLTEKEKEIEVERVKAESAQASAKMLQEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRV 540 TLTEKEKEIEVERVKAESAQASAKML EMQRKNEQMMEQKERSYQEHLKQLTEKMENDRV Sbjct: 481 TLTEKEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRV 540 Query: 541 QLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQDLQTKMRRRKACTIS 592 QLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQDLQTKMRRRKACTIS Sbjct: 541 QLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQDLQTKMRRRKACTIS 592 >2D4H-A nrPDB Length = 328 Score = 519 bits (1336), Expect = e-147, Method: Composition-based stats. Identities = 317/317 (100%), Positives = 317/317 (100%) Query: 1 MASEIHMTGPMCLIENTNGRLMANPEALKILSAITQPMVVVAIVGLYRTGKSYLMNKLAG 60 MASEIHMTGPMCLIENTNGRLMANPEALKILSAITQPMVVVAIVGLYRTGKSYLMNKLAG Sbjct: 12 MASEIHMTGPMCLIENTNGRLMANPEALKILSAITQPMVVVAIVGLYRTGKSYLMNKLAG 71 Query: 61 KKKGFSLGSTVQSHTKGIWMWCVPHPKKPGHILVLLDTEGLGDVEKGDNQNDSWIFALAV 120 KKKGFSLGSTVQSHTKGIWMWCVPHPKKPGHILVLLDTEGLGDVEKGDNQNDSWIFALAV Sbjct: 72 KKKGFSLGSTVQSHTKGIWMWCVPHPKKPGHILVLLDTEGLGDVEKGDNQNDSWIFALAV 131 Query: 121 LLSSTFVYNSIGTINQQAMDQLYYVTELTHRIRSKSSPDENENEVEDSADFVSFFPDFVW 180 LLSSTFVYNSIGTINQQAMDQLYYVTELTHRIRSKSSPDENENEVEDSADFVSFFPDFVW Sbjct: 132 LLSSTFVYNSIGTINQQAMDQLYYVTELTHRIRSKSSPDENENEVEDSADFVSFFPDFVW 191 Query: 181 TLRDFSLDLEADGQPLTPDEYLTYSLKLKKGTSQKDETFNLPRLCIRKFFPKKKCFVFDR 240 TLRDFSLDLEADGQPLTPDEYLTYSLKLKKGTSQKDETFNLPRLCIRKFFPKKKCFVFDR Sbjct: 192 TLRDFSLDLEADGQPLTPDEYLTYSLKLKKGTSQKDETFNLPRLCIRKFFPKKKCFVFDR 251 Query: 241 PVHRRKLAQLEKLQDEELDPEFVQQVADFCSYIFSNSKTKTLSGGIQVNGPRLESLVLTY 300 PVHRRKLAQLEKLQDEELDPEFVQQVADFCSYIFSNSKTKTLSGGIQVNGPRLESLVLTY Sbjct: 252 PVHRRKLAQLEKLQDEELDPEFVQQVADFCSYIFSNSKTKTLSGGIQVNGPRLESLVLTY 311 Query: 301 VNAISSGDLPCMENAVL 317 VNAISSGDLPCMENAVL Sbjct: 312 VNAISSGDLPCMENAVL 328 >3QOF-A nrPDB Length = 459 Score = 452 bits (1162), Expect = e-127, Method: Composition-based stats. Identities = 88/390 (22%), Positives = 157/390 (40%), Gaps = 50/390 (12%) Query: 36 QPMVVVAIVGLYRTGKSYLMNKL------------AGKKK----GFSLGSTVQSHTKGIW 79 + +V V++ G +R GKS+LM+ + G GFS + T GI Sbjct: 77 KEVVAVSVAGAFRKGKSFLMDFMLRYMYNQESVDWVGDYNEPLTGFSWRGGSERETTGIQ 136 Query: 80 MWC----VPHPKKPGHILVLLDTEGLGDVEKGDNQNDSWIFALAVLLSSTFVYNSIGTIN 135 +W + P ++L+DT+G D + ++ + +FAL+ ++SS VYN + Sbjct: 137 IWSEIFLINKPDGKKVAVLLMDTQGTFD-SQSTLRDSATVFALSTMISSIQVYNLSQNVQ 195 Query: 136 QQAMDQLYYVTELTHRIRSKSSPDENENEVEDSADFVSFFPDFVWTLRDFSLDLEADGQP 195 + + L TE ++ F+ F ++ +RD+S E Sbjct: 196 EDDLQHLQLFTEYGRLAMEET--------------FLKPFQSLIFLVRDWSFPYEFSYGA 241 Query: 196 LTPDEYLTYSLKLKKGTSQKDETFNLPRLCIRKFFPKKKCFVFDRPVHRRKLAQLEKLQD 255 ++L LK+ +Q +E N+ R I F CF+ P + + Sbjct: 242 DGGAKFLEKRLKV--SGNQHEELQNV-RKHIHSCFTNISCFLLPHPGLKVATNPNFDGKL 298 Query: 256 EELDPEFVQQVADFCSYIFSN--SKTKTLSGGIQVNGPRLESLVLTYVNAISSGDLPCME 313 +E+D EF++ + ++ S K ++G ++ L Y+ +LP + Sbjct: 299 KEIDDEFIKNLKILIPWLLSPESLDIKEINGN-KITCRGLVEYFKAYIKIYQGEELPHPK 357 Query: 314 NAVLALAQIENSAAVQKAIAHYEQQM-----GQKVQLPTETLQELLDLHRDSEREAIEVF 368 + + A A+ N AAV A Y ++M G K L LQ H + E++++F Sbjct: 358 SMLQATAEANNLAAVATAKDTYNKKMEEICGGDKPFLAPNDLQT---KHLQLKEESVKLF 414 Query: 369 IRSSFKDVDHLFQKELAAQLEKKRDDFCKQ 398 R K F + QLE + D+ Q Sbjct: 415 -RGVKKMGGEEFSRRYLQQLESEIDELYIQ 443 >3X1D-A nrPDB Length = 541 Score = 431 bits (1108), Expect = e-121, Method: Composition-based stats. Identities = 91/397 (22%), Positives = 158/397 (39%), Gaps = 56/397 (14%) Query: 38 MVVVAIVGLYRTGKSYLMN-----------------KLAGKK---KGFSLGSTVQSHTKG 77 + VV++ G +R GKS+L++ L G+ +GFS + T G Sbjct: 38 VCVVSVAGAFRKGKSFLLDFFLRYMYSKYVHHDATDWLGGESDPLEGFSWRGGSERDTTG 97 Query: 78 IWMWC----VPHPKKPGHILVLLDTEGLGDVEKGDNQNDSWIFALAVLLSSTFVYNSIGT 133 I MW +P ++LLDT+G D + ++ + +FAL+ +LSS +YN Sbjct: 98 ILMWSDIFLHDYPNGDKIAIILLDTQGAFD-SQSTVRDCATVFALSTMLSSVQIYNLSQN 156 Query: 134 INQQAMDQLYYVTELTHRIRSKSSPDENENEVEDSADFVSFFPDFVWTLRDFSLDLEADG 193 I + + L TE + + F + +RD+S EA+ Sbjct: 157 IQEDDLQHLQLFTEYGRLALADTGK--------------KPFQRLQFLVRDWSFPYEAEY 202 Query: 194 QPLTPDEYLTYSLKLKKGTSQKDETFNLPRLCIRKFFPKKKCFVFDRPVHRRKLAQLEKL 253 L D+ L L++ Q E +L R I F + CF+ P Sbjct: 203 GALGGDKILKRRLEVSD--KQHPELQSLRR-HISSCFTEVACFLMPHPGLNVATNPKFDG 259 Query: 254 QDEELDPEFVQQVADFCSYIFS--NSKTKTLSGGIQVNGPRLESLVLTYVNAISSGDLPC 311 + +++ PEF + + + N K +SG +V L +Y+N +LP Sbjct: 260 RLQDITPEFKSSLRSLVPMLLAPDNLVYKEISGQ-RVRARDLIQYFQSYMNIYKGNELPE 318 Query: 312 MENAVLALAQIENSAAVQKAIAHYEQQM-----GQKVQLPTETLQELLDLHRDSEREAIE 366 ++ ++A A+ + AV A Y Q M G + L T LQ H + +A+ Sbjct: 319 PKSMLVATAEANHLTAVAAAKELYGQLMEEVCGGTRPYLSTAHLQT---EHLRVKDKALF 375 Query: 367 VF---IRSSFKDVDHLFQKELAAQLEKKRDDFCKQNQ 400 F + ++ F+K+L LE+ ++ N+ Sbjct: 376 QFAAKRKMGGEEFTEKFRKQLEDDLEEVFTNYQAHNE 412 >5VGR-A nrPDB Length = 431 Score = 424 bits (1091), Expect = e-119, Method: Composition-based stats. Identities = 94/395 (23%), Positives = 165/395 (41%), Gaps = 55/395 (13%) Query: 38 MVVVAIVGLYRTGKSYLMNKL---------AGKKK----------GFSLGSTVQSHTKGI 78 +VVV++ G +R GKS++++ + +G GFS T GI Sbjct: 40 VVVVSVAGAFRKGKSFILDFMLRYLYSQKESGHSNWLGDPEEPLTGFSWRGGSDPETTGI 99 Query: 79 WMWC----VPHPKKPGHILVLLDTEGLGDVEKGDNQNDSWIFALAVLLSSTFVYNSIGTI 134 +W V P +VL+DT+G D + ++ + IFAL+ + SS +YN I Sbjct: 100 QIWSEVFTVEKPGGKKVAVVLMDTQGAFD-SQSTVKDCATIFALSTMTSSVQIYNLSQNI 158 Query: 135 NQQAMDQLYYVTELTHRIRSKSSPDENENEVEDSADFVSFFPDFVWTLRDFSLDLEADGQ 194 + + QL TE + F F ++ +RD+S E Sbjct: 159 QEDDLQQLQLFTEYGRLAMDEI--------------FQKPFQTLMFLVRDWSFPYEYSYG 204 Query: 195 PLTPDEYLTYSLKLKKGTSQKDETFNLPRLCIRKFFPKKKCFVFDRPVHRRKLAQLEKLQ 254 +L L++K+ Q +E N+ R I F CF+ P + + + Sbjct: 205 LQGGMAFLDKRLQVKE--HQHEEIQNV-RNHIHSCFSDVTCFLLPHPGLQVATSPDFDGK 261 Query: 255 DEELDPEFVQQVADFCSYIFSNSKT--KTLSGGIQVNGPRLESLVLTYVNAISSGDLPCM 312 +++ EF +Q+ Y+ + SK K ++G +V L Y+ DLP Sbjct: 262 LKDIAGEFKEQLQALIPYVLNPSKLMEKEINGS-KVTCRGLLEYFKAYIKIYQGEDLPHP 320 Query: 313 ENAVLALAQIENSAAVQKAIAHYEQQM-----GQKVQLPTETLQELLDLHRDSEREAIEV 367 ++ + A A+ N AA A Y M G+K L + L+E H + ++ A++ Sbjct: 321 KSMLQATAEANNLAAAASAKDIYYNNMEEVCGGEKPYLSPDILEE---KHCEFKQLALDH 377 Query: 368 FIRS---SFKDVDHLFQKELAAQLEKKRDDFCKQN 399 F ++ KD +Q+EL ++++ ++FCK N Sbjct: 378 FKKTKKMGGKDFSFRYQQELEEEIKELYENFCKHN 412 >6B9G-B nrPDB Length = 340 Score = 353 bits (905), Expect = 1e-97, Method: Composition-based stats. Identities = 61/294 (20%), Positives = 115/294 (39%), Gaps = 41/294 (13%) Query: 36 QPMVVVAIVGLYRTGKSYLMNKL------------AGKKK----GFSLGSTVQSHTKGIW 79 + +V V++ G +R GKS+LM+ + G GFS + T GI Sbjct: 66 KEVVAVSVAGAFRKGKSFLMDFMLRYMYNQESVDWVGDYNEPLTGFSWRGGSERETTGIQ 125 Query: 80 MWC----VPHPKKPGHILVLLDTEGLGDVEKGDNQNDSWIFALAVLLSSTFVYNSIGTIN 135 +W + P ++L+DT+G D + ++ + +FAL+ ++SS VYN + Sbjct: 126 IWSEIFLINKPDGKKVAVLLMDTQGTFD-SQSTLRDSATVFALSTMISSIQVYNLSQNVQ 184 Query: 136 QQAMDQLYYVTELTHRIRSKSSPDENENEVEDSADFVSFFPDFVWTLRDFSLDLEADGQP 195 + + L TE ++ F+ F ++ +RD+S E Sbjct: 185 EDDLQHLQLFTEYGRLAMEET--------------FLKPFQSLIFLVRDWSFPYEFSYGA 230 Query: 196 LTPDEYLTYSLKLKKGTSQKDETFNLPRLCIRKFFPKKKCFVFDRPVHRRKLAQLEKLQD 255 ++L LK+ +Q +E N+ R I F CF+ P + + Sbjct: 231 DGGAKFLEKRLKV--SGNQHEELQNV-RKHIHSCFTNISCFLLPHPGLKVATNPNFDGKL 287 Query: 256 EELDPEFVQQVADFCSYIFSN--SKTKTLSGGIQVNGPRLESLVLTYVNAISSG 307 +E+D EF++ + ++ S K ++G ++ L Y+ Sbjct: 288 KEIDDEFIKNLKILIPWLLSPESLDIKEINGN-KITCRGLVEYFKAYIKIYQGE 340 >2I1J-A nrPDB Length = 575 Score = 44.7 bits (104), Expect = 1e-04, Method: Composition-based stats. Identities = 31/110 (28%), Positives = 65/110 (59%), Gaps = 12/110 (10%) Query: 485 KEKEIEVERVKAESAQASAKMLQEMQRKNEQM-------MEQKERSYQEHLKQLTEKMEN 537 K I+V+++KA++ + K+ ++ QR+ Q+ E+K++ YQ+ L+Q+ E+ME Sbjct: 296 KPDTIDVQQMKAQAREE--KLAKQAQREKLQLEIAARERAEKKQQEYQDRLRQMQEEMER 353 Query: 538 DRVQLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQDLQTKMRRRK 587 + LL+ Q+ + L+L+EQ + L+ ++E +NE+Q + ++ K Sbjct: 354 SQANLLEAQD--MILRLEEQLRQLQAA-KEELEQRQNELQAMMQRLEETK 400 >4RM9-A nrPDB Length = 587 Score = 37.0 bits (84), Expect = 0.021, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 21/144 (14%) Query: 459 EILQTYLKSKESMTDAILQTDQTLTEKEKEIEVERVKAESAQASAKMLQEMQRKNE---- 514 E+ Q +++E L+ Q TEK++ VER K + + +++ +Q E Sbjct: 302 EVQQMKAQAREEKHQKQLERQQLETEKKRRETVEREKEQMMREKEELMLRLQDYEEKTKK 361 Query: 515 ---QMMEQKERSYQ-----EHLKQLTEKMENDRVQLLK---EQERTLALKLQEQEQLLKE 563 ++ EQ +R+ Q + ++ E++E DR+ L+ E ER +++ QEQL E Sbjct: 362 AERELSEQIQRALQLEEERKRAQEEAERLEADRMAALRAKEELERQAVDQIKSQEQLAAE 421 Query: 564 GFQKESRIMKNEIQDLQTKMRRRK 587 + ++I L + RRRK Sbjct: 422 LAEYTAKIA------LLEEARRRK 439 Score = 30.9 bits (68), Expect = 1.5, Method: Composition-based stats. Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 11/87 (12%) Query: 508 EMQRKNEQMMEQK-----ERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLK 562 E+Q+ Q E+K ER E K+ E +E ++ Q+++E+E L L+LQ+ E+ K Sbjct: 302 EVQQMKAQAREEKHQKQLERQQLETEKKRRETVEREKEQMMREKEE-LMLRLQDYEEKTK 360 Query: 563 EGFQKESRIMKNEIQD-LQTKMRRRKA 588 K R + +IQ LQ + R++A Sbjct: 361 ----KAERELSEQIQRALQLEEERKRA 383 >4QCC-A nrPDB Length = 291 Score = 37.0 bits (84), Expect = 0.023, Method: Composition-based stats. Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 13/102 (12%) Query: 491 VERVKAESAQASAKMLQEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTL 550 VER A+ A A K +E Q++ EQ +QK S L MEN LKEQE+ L Sbjct: 186 VERT-AQQAAAFVKAYREAQKQKEQRQDQK--SAYALGASLGRYMENS----LKEQEK-L 237 Query: 551 ALKLQEQEQLL---KEGFQKESRIMKNEI-QDLQTKMRRRKA 588 +KL +++QL+ ++ F +S++ EI Q LQ R K+ Sbjct: 238 GIKL-DKDQLIAGVQDAFADKSKLSDQEIEQTLQAFEARVKS 278 >6FO1-G nrPDB Length = 665 Score = 37.0 bits (84), Expect = 0.025, Method: Composition-based stats. Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 26/152 (17%) Query: 427 YSKPGGYRLFVQKLQDLKKKYYEEPRKGIQAEEILQTYLKSKESMTDAILQTDQTLTEKE 486 YS+ G R +QKL++ KK Y E +L+ + E+ T+ + + Q L KE Sbjct: 204 YSRRGAARFALQKLEEAKKDY----------ERVLELEPNNFEA-TNELRKISQALASKE 252 Query: 487 -----------KEIEVERVKAESAQASAKMLQEMQRKNEQMMEQKERSYQEHLKQLTEKM 535 K E ER + E+ Q + + E R N KE Y+ ++ T + Sbjct: 253 NSYPKEADIVIKSTEGERKQIEAQQNKQQAISEKDRGNGFF---KEGKYERAIECYTRGI 309 Query: 536 ENDRVQLLKEQERTLA-LKLQEQEQLLKEGFQ 566 D L R +A LK+Q+ E+ K+ Q Sbjct: 310 AADGANALLPANRAMAYLKIQKYEEAEKDCTQ 341 >5CA8-A nrPDB Length = 692 Score = 36.3 bits (82), Expect = 0.042, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 11/103 (10%) Query: 40 VVAIVGLYRTGKSYLMNKLAGKKKGFSLGSTVQSHTKGIWMWCVPHPK------KPGHIL 93 ++++ G TGKS L+N+L Q TKGIW+ P + Sbjct: 60 IISVFGSQSTGKSTLLNRLFNTNFDVMDELNRQQTTKGIWLAYSPVVSTTLGHTTSKSNI 119 Query: 94 VLLDTEGLGDVEKGDNQN---DSWIFALAVLLSSTFVYNSIGT 133 +++D EG E+G++Q+ + +FAL+ S + N T Sbjct: 120 LVMDVEGTDGRERGEDQDFERKAALFALST--SEVLIINIWET 160 >3A8P-A nrPDB Length = 263 Score = 34.3 bits (77), Expect = 0.13, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 31/80 (38%), Gaps = 6/80 (7%) Query: 253 LQDEELDPEFVQQVADFCSYIFSNSKTKTLSGGIQVNGPRLESL------VLTYVNAISS 306 LQ ++D + + S + K + I+ LE + Y+ ++ Sbjct: 148 LQKIDMDSKMKKMAELQLSVVSDPKNRKAIENQIRQWEQNLEKFHMDLFRMRCYLASLQG 207 Query: 307 GDLPCMENAVLALAQIENSA 326 G+LP ++ + A ++ A Sbjct: 208 GELPNPKSLLAATSRPSKLA 227 >3AGK-A nrPDB Length = 373 Score = 34.0 bits (76), Expect = 0.19, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 54/120 (45%), Gaps = 16/120 (13%) Query: 365 IEVFIRSSFKDVDHLFQKELAAQLEKKRDDFCKQNQEASSDRCSALLQVIFSPLEEE--V 422 +E F+ K Q+ +E+ D+F K+ E +S+ + PL E+ + Sbjct: 169 LEGFVPGKHKMGGQS-QRRYERIIEQMVDEFFKKVGEEASN--------LLVPLAEKGVL 219 Query: 423 KAGIYSKPGGYRLFVQKLQDLKKKYYEEPRKGIQAEEILQTYLKSKESMTDAILQTDQTL 482 K I + PG + K + ++ Y + K I A E++ + + + +A+++ ++ + Sbjct: 220 KGVIVAGPG-----LAKQEFVEGNYLDYRLKKILAPELVDVAYQGLQGLKEAVMKAEKVV 274 >1Y1U-A nrPDB Length = 585 Score = 34.0 bits (76), Expect = 0.20, Method: Composition-based stats. Identities = 27/121 (22%), Positives = 59/121 (48%), Gaps = 12/121 (9%) Query: 454 GIQAEEILQTYLKSKESMTDAILQTDQTLTEKEKEIEVE-----------RVKAESAQAS 502 G+ + + Q +L+ + + L T T E +K + + R++A+ AQ Sbjct: 4 GVLVDAMSQKHLQINQRFEELRLITQDTENELKKLQQTQEYFIIQYQESLRIQAQFAQLG 63 Query: 503 AKMLQEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLK 562 QE + E ++QK+ S + L++ + ++ RV+L ++ ++TL L ++Q +L Sbjct: 64 QLNPQERMSR-ETALQQKQVSLETWLQREAQTLQQYRVELAEKHQKTLQLLRKQQTIILD 122 Query: 563 E 563 + Sbjct: 123 D 123 >6OJ5-A nrPDB Length = 887 Score = 33.2 bits (74), Expect = 0.31, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 61/115 (53%), Gaps = 14/115 (12%) Query: 467 SKESMTDAIL-QTDQTLTEKEKEIEV-ERVKAESAQASAKMLQEMQRKNEQMMEQKERSY 524 +K +++ +L Q ++ +T+ ++EI++ + VK + + S ++L+ ++ K E QKE Y Sbjct: 39 TKPQLSEKVLSQKEEVITDNQEEIKIADEVKKSNKEESKQLLEVLKTKEEH---QKEVQY 95 Query: 525 Q---------EHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQKESR 570 + E + + +K+E+ + + +K+Q + + Q + + +KE R Sbjct: 96 EILQKTIPTFEPKESILKKLEDIKPEQVKKQTKLFRIFEPRQLPVYRANGEKELR 150 >5TQX-A nrPDB Length = 655 Score = 33.2 bits (74), Expect = 0.31, Method: Composition-based stats. Identities = 46/224 (20%), Positives = 90/224 (40%), Gaps = 37/224 (16%) Query: 367 VFIRSSFKDVDHLFQKELAAQLEKKRDDFCKQNQEASSDRCSALLQVIFSPLEEEVKAGI 426 ++ +D LFQ + AA L R N + + Q + + LE Sbjct: 427 HYVSGLKEDYSRLFQGQRAAMLSLLR---YNANLTKMKNTLISASQQLKAKLE------- 476 Query: 427 YSKPGGYRLFVQKLQDLKKKYYEEPRKGIQAEEILQTYLKSKESMTDAILQTDQTLTEKE 486 F + +Q ++Y E+ GI +E++L+ + + M + + + Sbjct: 477 --------FFHKSIQLDLERYSEQMTYGISSEKMLKAW----KEMEEKAIHYAEVGVIGY 524 Query: 487 KEIEVERVKAESAQASAKMLQEMQ-----RKNEQMMEQKERSYQEHLKQLTEKMENDRVQ 541 E ++ + AE + E+Q R+ +ME E+ + KQL + + Sbjct: 525 LEDQIMSLHAE--------IMELQKSPYGRRQGDLMESLEQRAIDLYKQLKHRPSDHSYS 576 Query: 542 LLKEQERTLALKLQEQEQLLKEGFQKESRIM--KNEIQDLQTKM 583 E + + +Q Q+++LKE F S+++ K +I DL K+ Sbjct: 577 DSTEMVKIIVHTVQSQDRVLKELFGHLSKLLGCKQKIIDLLPKV 620 >5YZ0-C nrPDB Length = 791 Score = 33.2 bits (74), Expect = 0.33, Method: Composition-based stats. Identities = 32/119 (26%), Positives = 59/119 (49%), Gaps = 22/119 (18%) Query: 468 KESMTDAILQTD-QTLTEKEKEIEVERVKAESAQASAKMLQEMQRKNEQMMEQKERSYQE 526 K++ +LQ + L EK K +E E V ++ + K+L++ + E ++E++ RS+ Sbjct: 109 KDNFELEVLQAQYKELKEKMKVME-EEVLIKNGEI--KILRDSLHQTESVLEEQRRSH-- 163 Query: 527 HLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLK-EGFQKESRIMKNEIQDLQTKMR 584 L EQE+T AL +E+E K + Q E + E+ +L+TK++ Sbjct: 164 ---------------FLLEQEKTQALSDKEKEFSKKLQSLQSELQFKDAEMNELRTKLQ 207 >3JAX-A nrPDB Length = 974 Score = 33.2 bits (74), Expect = 0.36, Method: Composition-based stats. Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 11/89 (12%) Query: 496 AESAQASAKMLQEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQ 555 AE + A M +E R E + + + R K+L EKM V LL+E+ L L++Q Sbjct: 854 AEREKEMASMKEEFTRLKEALEKSEARR-----KELEEKM----VSLLQEKN-DLQLQVQ 903 Query: 556 EQEQLLKEGFQKESRIMKNEIQDLQTKMR 584 ++ L + ++ +++KN+IQ L+ K++ Sbjct: 904 AEQDNLADAEERCDQLIKNKIQ-LEAKVK 931 >2FTZ-A nrPDB Length = 284 Score = 32.4 bits (72), Expect = 0.56, Method: Composition-based stats. Identities = 14/33 (42%), Positives = 22/33 (66%) Query: 437 VQKLQDLKKKYYEEPRKGIQAEEILQTYLKSKE 469 +QK +++ KYYEE KGI++E + +T KE Sbjct: 244 IQKAREMADKYYEEVLKGIESEGLFRTLFLLKE 276 >5AMO-A nrPDB Length = 471 Score = 32.0 bits (71), Expect = 0.73, Method: Composition-based stats. Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 14/124 (11%) Query: 462 QTYLKSKESMTDAILQTDQTLTEKEKEIEV-ERVKAESAQASAKMLQEMQRKNEQMMEQK 520 Q + S+++ T + Q + + + IEV +R Q KM +M + E +Q Sbjct: 65 QQTMCSRDARTKQLRQLLEKVQNMSQSIEVLDRRTQRDLQYVEKMENQM-KGLETKFKQV 123 Query: 521 ERSYQEHL----KQLTEKMENDR--VQLLKEQERTLALKLQEQEQLLKEGFQKESRIMKN 574 E S+++HL K + KM+ R + +L+E + L LQ KE Q + ++ N Sbjct: 124 EESHKQHLARQFKAIKAKMDELRPLIPVLEEYKADAKLVLQ-----FKEEVQNLTSVL-N 177 Query: 575 EIQD 578 E+Q+ Sbjct: 178 ELQE 181 >5M6U-B nrPDB Length = 724 Score = 31.6 bits (70), Expect = 0.91, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 46/97 (47%), Gaps = 2/97 (2%) Query: 494 VKAESAQASAKMLQEMQRKNEQMMEQKERSYQEHLKQLTE-KMENDRVQLLKEQERTLAL 552 VK ++ +A K L E + ++ + +R Y+++ + E +M+ ++ E + Sbjct: 437 VKEDNIEAVGKKLHEYNTQFQEKSREYDRLYEDYTRTSQEIQMKRTAIEAFNETIKIFEE 496 Query: 553 KLQEQEQLLKEGFQKESRI-MKNEIQDLQTKMRRRKA 588 + Q QE+ KE +K R + EIQ + + K+ Sbjct: 497 QCQTQERYSKEYIEKFKREGNETEIQRIMHNYEKLKS 533 >5DK4-A nrPDB Length = 329 Score = 31.3 bits (69), Expect = 1.1, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 84/225 (37%), Gaps = 21/225 (9%) Query: 311 CMENAVLALAQIENSAAVQKAIAHYEQQMGQKVQLPTETL---QELLDLHRDSEREAIEV 367 +E + AV + Y M + L + E H + R+ E Sbjct: 102 ELERMTQFKEKSAGKEAVSAGLLTYPPLMAADILLYNTDIVPVGEDQKQHIELTRDLAER 161 Query: 368 FIRSSFKDVDHLFQK--ELAAQLEKKRDDFCKQNQEASSDRCSALLQVIFSPLEEEVKAG 425 F + + + ++ A++ D K ++ + + L +E+++K+ Sbjct: 162 FNKRYGELFTIPEARIPKVGARIMSLVDPTKKMSKSDPNPKAYITLLDDAKTIEKKIKSA 221 Query: 426 IYSKPGGYRLFVQK---LQDLKKKYYEEPRKGIQAEEILQTYLKS-----KESMTDAILQ 477 + G R + + +L Y G EE+ + Y K + +++ Sbjct: 222 VTDSEGTIRYDKEAKPGISNLLNIY--STLSGQSIEELERQYEGKGYGVFKADLAQVVIE 279 Query: 478 TDQTLTEK-----EKEIEVERVKAESAQASAKMLQEMQRKNEQMM 517 T + + E+ E E E++RV E A+ + ++ EM RK EQ M Sbjct: 280 TLRPIQERYHHWMESE-ELDRVLDEGAEKANRVASEMVRKMEQAM 323 >5JQE-A nrPDB Length = 565 Score = 31.3 bits (69), Expect = 1.2, Method: Composition-based stats. Identities = 50/296 (16%), Positives = 109/296 (36%), Gaps = 43/296 (14%) Query: 256 EELDPEFVQQVADFCSYIFSNSKTKTLSGGIQVNGPRLESL----------VLTYVNAIS 305 +EL EF++ Y+ ++ + ++ + L+S T NA Sbjct: 285 KELAKEFLEN------YLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENAQK 338 Query: 306 SGDLPCMENA-----VLALAQIEN----------SAAVQKAIAHYEQQMGQKVQLPTETL 350 +P + + A I AA Q + QL +E L Sbjct: 339 GEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALAAAQTHMDFSRNLYDIGEQLDSEDL 398 Query: 351 QELLDLHRDSEREAIEVFIRSSFKDVDHLFQKELAAQ--LEKKRDDFCKQNQEASSDRCS 408 L L D + + I+ + L +K + + L ++ + N+ D Sbjct: 399 ASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLSFLKELLFRINR---LDLLI 455 Query: 409 ALLQVIFSPLEEEVKAGIYSKPGGYRLFVQKLQDLKKKYYEEPRKGIQAEEILQTYLKSK 468 L +E E++ ++ YR+ + ++ + + KG EEI + L Sbjct: 456 TYLNTRKEEMERELQTPGRAQISAYRVMLYQISEEVSRSELRSFKGGLQEEISKCKLDDD 515 Query: 469 ESMTDAILQTDQTLTEKEKEIEV-ERVKAESAQASAKMLQEMQRKNEQMMEQKERS 523 ++ D ++ ++ + E ++++ +RV A+ ++ K++ + + + KERS Sbjct: 516 MNLLDIFIEMEKRVILGEGKLDILKRVCAQINKSLLKIINDYEEFS------KERS 565 >5U2G-A nrPDB Length = 838 Score = 31.3 bits (69), Expect = 1.2, Method: Composition-based stats. Identities = 8/58 (13%), Positives = 18/58 (31%), Gaps = 3/58 (5%) Query: 35 TQPMVVVAIVGLYRTGKSYLM---NKLAGKKKGFSLGSTVQSHTKGIWMWCVPHPKKP 89 ++P + A++G+ + G L+ K+ G +W Sbjct: 320 SEPFIPAAVIGIVKGGADILLASGEKMTLSTNAMRWTGRSNPVKVGEQIWIHQRANGE 377 >3KZ4-A nrPDB Length = 880 Score = 31.3 bits (69), Expect = 1.3, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 60/115 (52%), Gaps = 14/115 (12%) Query: 467 SKESMTDAIL-QTDQTLTEKEKEIEV-ERVKAESAQASAKMLQEMQRKNEQMMEQKERSY 524 ++ ++D +L + ++ +T+ ++EI++ + VK + + S ++L+ ++ K E QKE Y Sbjct: 32 NRMQLSDKVLSKKEEVVTDSQEEIKIADEVKKSTKEESKQLLEVLKTKEEH---QKEIQY 88 Query: 525 Q---------EHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQKESR 570 + E + + +K+E+ + + K+Q + + Q + + +KE R Sbjct: 89 EILQKTIPTFEPKESILKKLEDIKPEQAKKQTKLFRIFEPRQLPIYRANGEKELR 143 >5OOL-q nrPDB Length = 222 Score = 30.9 bits (68), Expect = 1.7, Method: Composition-based stats. Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 16/98 (16%) Query: 502 SAKMLQEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQ-----------ERTL 550 S +QE R + EQK R ++H+ + KM V ++Q ER Sbjct: 95 SLATMQESLRVKQLAEEQKRREREQHIAECMAKMPQMIVNWQQQQRENWEKAQADKERRA 154 Query: 551 ALKLQEQEQLLKEGFQKESRIMKNE--IQDLQTKMRRR 586 L+ + QE L G+Q + R + + +QDL+ K R+R Sbjct: 155 RLQAEAQELL---GYQVDPRSARFQELLQDLEKKERKR 189 >4CT9-A nrPDB Length = 394 Score = 30.9 bits (68), Expect = 1.7, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 6/86 (6%) Query: 419 EEEVKAGIYSKPGGYRLFVQKLQDLKKKYYEEPRKGI------QAEEILQTYLKSKESMT 472 EEEV+ G Y K G + V+ +D + E +K + + E L +K + Sbjct: 201 EEEVEVGTYPKVHGVEVVVRGREDRVAELAERIKKKLLKEVWGEGEMTLAEAVKRRMERE 260 Query: 473 DAILQTDQTLTEKEKEIEVERVKAES 498 A L T ++LT E+ RV S Sbjct: 261 GATLSTMESLTGGLLGAEITRVPGAS 286 >4KIK-B nrPDB Length = 677 Score = 30.5 bits (67), Expect = 1.9, Method: Composition-based stats. Identities = 47/253 (18%), Positives = 104/253 (41%), Gaps = 40/253 (15%) Query: 331 AIAHYEQQMGQKVQLPTET--LQELLDLHRDSERE-----AIEVFIRSSFKDVDHLFQKE 383 + YE Q+ + Q + + LQE + + + I++ +D + L Q + Sbjct: 399 SKITYETQISPRPQPESVSCILQEP-KRNLAFFQLRKVWGQVWHSIQTLKEDCNRLQQGQ 457 Query: 384 LAAQLEKKRDDFCKQNQEASSDRCSALLQVIFSPLEEEVKAGIYSKPGGYRLFVQKLQDL 443 AA + R++ C + S + + +++KA + F +Q Sbjct: 458 RAAMMNLLRNNSCLSKMKNS-----------MASMSQQLKAKL-------DFFKTSIQID 499 Query: 444 KKKYYEEPRKGIQAEEILQTYLKSKESMTDAILQTDQTLTEKEKEIEVERVKAESAQASA 503 +KY E+ GI ++++L + + ++++ + E E ++ VER+ A Sbjct: 500 LEKYSEQTEFGITSDKLLLAWREMEQAV-------ELCGRENEVKLLVERMMALQTDIVD 552 Query: 504 KMLQEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKE 563 M RK ++ E +E ++L EK + R + + + + L LQ + Sbjct: 553 LQRSPMGRKQGGTLDDLEEQARELYRRLREKPRDQRTE--GDSQEMVRLLLQAIQS---- 606 Query: 564 GFQKESRIMKNEI 576 F+K+ R++ ++ Sbjct: 607 -FEKKVRVIYTQL 618 >2XV4-S nrPDB Length = 534 Score = 30.5 bits (67), Expect = 1.9, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 16/183 (8%) Query: 360 SEREAIEVFIRSSFKDVDHLFQKELAAQLEKKRDDFCKQNQEASSDRCSALLQVIFSPLE 419 E E F + + QK+ Q K+ +DF + + D +L F L+ Sbjct: 350 LESVVQERFGSRCARIFRLVLQKKHIEQ--KQVEDFAMIPAKEAKDMLYKMLSENFMSLQ 407 Query: 420 EEVKAGIYSKPGGYRLFVQKLQDLKKKYYEEPRKGIQAEEILQTYLKSKESMTDAILQTD 479 E K ++ + L+ + + K I A I + ++KE + Sbjct: 408 EIPKTPDHAPSRTFYLYTVNILSAARMLLHRCYKSI-ANLIERRQFETKE---------N 457 Query: 480 QTLTEKEKEIEVERVKAESAQASAKMLQEMQRKNEQMMEQKERSYQEHLKQLTEKMENDR 539 + L EK + +E ++ A LQE+ E+M+ ER E LK+ K++ Sbjct: 458 KRLLEKSQRVEAIIASMQATGAEEAQLQEI----EEMITAPERQQLETLKRNVNKLDASE 513 Query: 540 VQL 542 +Q+ Sbjct: 514 IQV 516 >2O94-A nrPDB Length = 112 Score = 30.5 bits (67), Expect = 2.0, Method: Composition-based stats. Identities = 21/51 (41%), Positives = 26/51 (50%) Query: 508 EMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQE 558 E QR+ EQ+ Q E EH+KQ E + Q L E +R L QEQE Sbjct: 51 EFQRQFEQLSRQHEAQLHEHIKQQQEMLAMKHQQELLEHQRKLERHRQEQE 101 >5G5P-A nrPDB Length = 805 Score = 30.1 bits (66), Expect = 2.8, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 33/64 (51%) Query: 483 TEKEKEIEVERVKAESAQASAKMLQEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQL 542 + + +E + S ++ +++ + E+M +++E+ +E QL +K EN Q+ Sbjct: 666 SAQNSTVEASKAHMISTTSNGAYDEKLSSEQEEMRKKEEQRIEEEKTQLKKKQENADKQV 725 Query: 543 LKEQ 546 + EQ Sbjct: 726 ITEQ 729 >2DM9-A nrPDB Length = 198 Score = 30.1 bits (66), Expect = 3.1, Method: Composition-based stats. Identities = 30/117 (25%), Positives = 62/117 (52%), Gaps = 10/117 (8%) Query: 456 QAEEILQTYLKSKESMTDAILQTDQTLTEKEKE-------IEVERVK-AESAQASAKMLQ 507 QAE+I + ++ E+ + I++ +T E EK+ +EV R + A + + +L+ Sbjct: 29 QAEKIKEEARRNAEAKAEWIIRRAKTQAELEKQRIIANARLEVRRKRLAIQEEIISSVLE 88 Query: 508 EMQRKNEQMMEQKE-RSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKE 563 E++R+ E M E + S + LK+ +++ +V+++ E+TL L E++ E Sbjct: 89 EVKRRLETMSEDEYFESVKALLKEAIKELNEKKVRVM-SNEKTLGLIASRIEEIKSE 144 >2L7B-A nrPDB Length = 307 Score = 29.7 bits (65), Expect = 3.2, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 41/77 (53%), Gaps = 3/77 (3%) Query: 515 QMMEQKERSYQEHLKQLTEKM---ENDRVQLLKEQERTLALKLQEQEQLLKEGFQKESRI 571 Q ++++ +++ E L+ E+M DR+ +KEQ + KL+EQ Q ++ + Sbjct: 209 QPLQERAQAWGERLRARMEEMGSRTRDRLDEVKEQVAEVRAKLEEQAQQIRLQAEAAQAR 268 Query: 572 MKNEIQDLQTKMRRRKA 588 +K+ + L M+R+ A Sbjct: 269 LKSRFEPLAEDMQRQWA 285 >2EFL-A nrPDB Length = 305 Score = 29.7 bits (65), Expect = 3.7, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 54/131 (41%), Gaps = 15/131 (11%) Query: 436 FVQKLQDLKKKYYEEPRKGIQAEEILQTYLKSK----ESMTDAILQTDQTLTEKEKEIEV 491 +VQ+L+ +K + + RK Q E L+S E + Q + + +I V Sbjct: 110 YVQELKQERKSNFHDGRKAQQHIETCWKQLESSKRRFERDCKEADRAQQYFEKMDADINV 169 Query: 492 ERVKAESAQASAKMLQEMQRKN--------EQMMEQKERSYQEHLKQLTEK---MENDRV 540 + E A+ A++ +M + ++ ++ Y H+ + +K ME R+ Sbjct: 170 TKADVEKARQQAQIRHQMAEDSKADYSSILQKFNHEQHEYYHTHIPNIFQKIQEMEERRI 229 Query: 541 QLLKEQERTLA 551 + E +T A Sbjct: 230 VRMGESMKTYA 240 >6FKI-E nrPDB Length = 507 Score = 29.7 bits (65), Expect = 3.9, Method: Composition-based stats. Identities = 36/138 (26%), Positives = 58/138 (42%), Gaps = 18/138 (13%) Query: 365 IEVFIRSSFKDVDHLFQKELAAQLEKKRDDFCK--QNQEASSDRCSALL-QVIFSPLE-E 420 I+ + + K L Q + D K QNQ A R LL Q +PL E Sbjct: 373 IKAMKKVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQPQSAPLTVE 432 Query: 421 EVKAGIYSKPGGYRLFVQKLQ-DLKKKYYEEPRKGIQAEEILQTYLKSKESMTDAILQTD 479 E IY+ GY + L+ D +KY E L+TY+K+ + I+ + Sbjct: 433 EQVMTIYTGTNGY---LDSLELDQVRKYLVE----------LRTYVKTNKPEFQEIISST 479 Query: 480 QTLTEKEKEIEVERVKAE 497 +T TE+ + + E ++ + Sbjct: 480 KTFTEEAEALLKEAIQEQ 497 >4KV9-A nrPDB Length = 412 Score = 29.7 bits (65), Expect = 3.9, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 28/50 (56%) Query: 506 LQEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQ 555 LQE K ++ ++ + +E ++Q+ + ++ Q+LKE ER L K + Sbjct: 315 LQETYEKRRELQRKELQQKEEEMRQMFVQRVKEKEQVLKEAERELQTKFE 364 >6EM5-I nrPDB Length = 663 Score = 29.3 bits (64), Expect = 4.3, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 6/72 (8%) Query: 508 EMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQK 567 ++++K+ + +K+R ++ ++Q+ E+M N Q + +ER + Q ++LK F Sbjct: 360 KLKKKDRVHLSKKQRKARKEMQQIEEEMRNAE-QAVSAEERE-----RNQSEILKIVFTI 413 Query: 568 ESRIMKNEIQDL 579 I+KN + L Sbjct: 414 YLNILKNNAKTL 425 >3K2S-A nrPDB Length = 243 Score = 28.9 bits (63), Expect = 5.8, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 74/160 (46%), Gaps = 7/160 (4%) Query: 435 LFVQKLQDLKKKYYEEPRKGIQAEEILQTYLKSKESMTDAILQTDQTLTEKEKEI--EVE 492 ++V L+D + Y + +++ L + +S+T + + L +E +E Sbjct: 17 VYVDVLKDSGRDYVSQFEGSALGKQLNLKLLDNWDSVTSTFSKLREQLGPVTQEFWDNLE 76 Query: 493 RVKAESAQASAKMLQEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLAL 552 + Q +K L+E++ K + ++ ++ +QE ++ +K+E R + L+E R Sbjct: 77 KETEGLRQEMSKDLEEVKAKVQPYLDDFQKKWQEEMELYRQKVEPLRAE-LQEGARQKLH 135 Query: 553 KLQEQEQLLKEGFQKESR----IMKNEIQDLQTKMRRRKA 588 +LQE+ L E + +R ++ + ++R+R A Sbjct: 136 ELQEKLSPLGEEMRDRARAHVDALRTHLAPYSDELRQRLA 175 >3R2P-A nrPDB Length = 185 Score = 28.9 bits (63), Expect = 6.5, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 74/160 (46%), Gaps = 7/160 (4%) Query: 435 LFVQKLQDLKKKYYEEPRKGIQAEEILQTYLKSKESMTDAILQTDQTLTEKEKEI--EVE 492 ++V L+D + Y + +++ L + +S+T + + L +E +E Sbjct: 18 VYVDVLKDSGRDYVSQFEGSALGKQLNLKLLDNWDSVTSTFSKLREQLGPVTQEFWDNLE 77 Query: 493 RVKAESAQASAKMLQEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLAL 552 + Q +K L+E++ K + ++ ++ +QE ++ +K+E R + L+E R Sbjct: 78 KETEGLRQEMSKDLEEVKAKVQPYLDDFQKKWQEEMELYRQKVEPLRAE-LQEGARQKLH 136 Query: 553 KLQEQEQLLKEGFQKESR----IMKNEIQDLQTKMRRRKA 588 +LQE+ L E + +R ++ + ++R+R A Sbjct: 137 ELQEKLSPLGEEMRDRARAHVDALRTHLAPYSDELRQRLA 176 >3U1V-A nrPDB Length = 338 Score = 28.9 bits (63), Expect = 6.7, Method: Composition-based stats. Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 19/105 (18%) Query: 419 EEEVKAGIYSKPGGYR-LFVQKLQDLKKKYYEEPRKGIQAEEILQTYLKSKESMTDAILQ 477 ++E K GI + Y L Q +++L+++Y KG Y K + +++ Sbjct: 231 DKEAKPGISNLLNIYSTLSGQSIEELERQY---EGKG---------YGVFKADLAQVVIE 278 Query: 478 TDQTLTEK-----EKEIEVERVKAESAQASAKMLQEMQRKNEQMM 517 T + + E+ E E E++RV E A+ + ++ EM RK EQ M Sbjct: 279 TLRPIQERYHHWMESE-ELDRVLDEGAEKANRVASEMVRKMEQAM 322 >5EXR-B nrPDB Length = 509 Score = 28.9 bits (63), Expect = 7.1, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 49/115 (42%), Gaps = 19/115 (16%) Query: 376 VDHLFQKELAAQLEKK----RDDFCKQNQEASSDRCSALLQVIFSPLEEEVKAGIYSKPG 431 +Q +L ++L K R++ + + D S + + EE++ Sbjct: 66 GTEQYQSKLESELRKLKFSYRENLEDEYEPRRRDHISHFILRLAYCQSEELR-------- 117 Query: 432 GYRLFVQKLQDLKKKYYEEPRKGIQAEEILQTYLKSKESMTDAILQTDQTLTEKE 486 R F+Q+ DL + R I ++ +Q +LK + +AI ++TL E+E Sbjct: 118 --RWFIQQEMDLLRF-----RFSILPKDKIQDFLKDSQLQFEAISDEEKTLREQE 165 >2JAQ-A nrPDB Length = 205 Score = 28.6 bits (62), Expect = 7.1, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 28/68 (41%) Query: 332 IAHYEQQMGQKVQLPTETLQELLDLHRDSEREAIEVFIRSSFKDVDHLFQKELAAQLEKK 391 I Y + + +++P L + ++ + I+ + + L +E L K Sbjct: 105 IDFYNNVVLENLKIPENKLSFDIVIYLRVSTKTAISRIKKRGRSEELLIGEEYWETLNKN 164 Query: 392 RDDFCKQN 399 ++F KQN Sbjct: 165 YEEFYKQN 172 >4B2T-H nrPDB Length = 543 Score = 28.6 bits (62), Expect = 7.7, Method: Composition-based stats. Identities = 31/125 (24%), Positives = 52/125 (41%), Gaps = 25/125 (20%) Query: 485 KEKEIEVERVKAESAQASAKMLQEMQRKN-EQMMEQKERSYQEHLKQLTEKMENDRV--- 540 +E +I ER + AK + R EQ ME+ ERS + + + ++ND V Sbjct: 349 EETQIGGERYNFFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAG 408 Query: 541 ---------QLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQD--------LQTKM 583 + L++ RT+ K +QLL + K I+ ++ D + K+ Sbjct: 409 GGAIEMELSKYLRDYSRTIPGK----QQLLIGAYAKALEIIPRQLCDNAGFDATNILNKL 464 Query: 584 RRRKA 588 R R A Sbjct: 465 RARHA 469 >5FMG-D nrPDB Length = 241 Score = 28.6 bits (62), Expect = 8.4, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 9/69 (13%) Query: 495 KAESAQASAKMLQEMQRKN-EQMMEQKERSYQEHLKQLTEKME----NDRVQLLKEQERT 549 KA++ +AK++QE KN ++ MEQK+ + LK + E +E N V LL E++ T Sbjct: 157 KAQAIGKNAKIVQEFLEKNYQENMEQKDCIFLA-LKAIFEVVELSSKNVEVALLTEKDLT 215 Query: 550 LALKLQEQE 558 ++EQE Sbjct: 216 F---IEEQE 221 >5MSN-A nrPDB Length = 293 Score = 28.6 bits (62), Expect = 8.9, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 22/56 (39%) Query: 350 LQELLDLHRDSEREAIEVFIRSSFKDVDHLFQKELAAQLEKKRDDFCKQNQEASSD 405 L + D + +E + KD++ F +E + F Q QEA ++ Sbjct: 106 LMSAMAESLDLQHLNVEDTHHAVGKDIEDEFNPYTREIIETVLNKFAVQEQEAENN 161 >4BPX-B nrPDB Length = 269 Score = 28.2 bits (61), Expect = 9.4, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 49/115 (42%), Gaps = 19/115 (16%) Query: 376 VDHLFQKELAAQLEKK----RDDFCKQNQEASSDRCSALLQVIFSPLEEEVKAGIYSKPG 431 +Q +L ++L K R++ + + D S + + EE++ Sbjct: 82 GTEQYQSKLESELRKLKFSYRENLEDEYEPRRRDHISHFILRLAYCQSEELR-------- 133 Query: 432 GYRLFVQKLQDLKKKYYEEPRKGIQAEEILQTYLKSKESMTDAILQTDQTLTEKE 486 R F+Q+ DL + R I ++ +Q +LK + +AI ++TL E+E Sbjct: 134 --RWFIQQEMDLLRF-----RFSILPKDKIQDFLKDSQLQFEAISDEEKTLREQE 181 >3Q5R-A nrPDB Length = 284 Score = 28.2 bits (61), Expect = 10.0, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 13/82 (15%) Query: 506 LQEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLAL-----KLQEQEQL 560 L+EM++ + ME+ Y E +Q+ EK++ L E+T++L K Q + Sbjct: 66 LEEMKKAQDLEMEELFAFYTEQERQIREKLD-----FLSALEQTISLVKKRMKRQMEYPA 120 Query: 561 LKEGF---QKESRIMKNEIQDL 579 L E F ++E RI++ E + L Sbjct: 121 LGEVFVLDEEEIRIIQTEAEGL 142 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.308 0.127 0.332 Lambda K H 0.267 0.0385 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,307,269 Number of Sequences: 36641 Number of extensions: 802784 Number of successful extensions: 3817 Number of sequences better than 10.0: 146 Number of HSP's better than 10.0 without gapping: 55 Number of HSP's successfully gapped in prelim test: 221 Number of HSP's that attempted gapping in prelim test: 3512 Number of HSP's gapped (non-prelim): 442 length of query: 592 length of database: 10,336,785 effective HSP length: 103 effective length of query: 489 effective length of database: 6,562,762 effective search space: 3209190618 effective search space used: 3209190618 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 62 (28.6 bits)