BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P32368 (623 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4TU3-X nrPDB 1297 0.0 3LWT-X nrPDB 1049 0.0 5E84-A nrPDB 33 0.51 3H0K-A nrPDB 31 1.8 6AZ3-B nrPDB 31 1.9 6E4E-A nrPDB 30 3.6 3LG4-A nrPDB 30 4.5 2W9S-A nrPDB 29 5.2 5UBU-A nrPDB 28 8.3 >4TU3-X nrPDB Length = 623 Score = 1297 bits (3357), Expect = 0.0, Method: Compositional matrix adjust. Identities = 623/623 (100%), Positives = 623/623 (100%) Query: 1 MTGPIVYVQNADGIFFKLAEGKGTNDAVIHLANQDQGVRVLGAEEFPVQGEVVKIASLMG 60 MTGPIVYVQNADGIFFKLAEGKGTNDAVIHLANQDQGVRVLGAEEFPVQGEVVKIASLMG Sbjct: 1 MTGPIVYVQNADGIFFKLAEGKGTNDAVIHLANQDQGVRVLGAEEFPVQGEVVKIASLMG 60 Query: 61 FIKLKLNRYAIIANTVEETGRFNGHVFYRVLQHSIVSTKFNSRIDSEEAEYIKLLELHLK 120 FIKLKLNRYAIIANTVEETGRFNGHVFYRVLQHSIVSTKFNSRIDSEEAEYIKLLELHLK Sbjct: 61 FIKLKLNRYAIIANTVEETGRFNGHVFYRVLQHSIVSTKFNSRIDSEEAEYIKLLELHLK 120 Query: 121 NSTFYFSYTYDLTNSLQRNEKVGPAASWKTADERFFWNHYLTEDLRNFAHQDPRIDSFIQ 180 NSTFYFSYTYDLTNSLQRNEKVGPAASWKTADERFFWNHYLTEDLRNFAHQDPRIDSFIQ Sbjct: 121 NSTFYFSYTYDLTNSLQRNEKVGPAASWKTADERFFWNHYLTEDLRNFAHQDPRIDSFIQ 180 Query: 181 PVIYGYAKTVDAVLNATPIVLGLITRRSIFRAGTRYFRRGVDKDGNVGNFNETEQILLAE 240 PVIYGYAKTVDAVLNATPIVLGLITRRSIFRAGTRYFRRGVDKDGNVGNFNETEQILLAE Sbjct: 181 PVIYGYAKTVDAVLNATPIVLGLITRRSIFRAGTRYFRRGVDKDGNVGNFNETEQILLAE 240 Query: 241 NPESEKIHVFSFLQTRGSVPIYWAEINNLKYKPNLVLGENSLDATKKHFDQQKELYGDNY 300 NPESEKIHVFSFLQTRGSVPIYWAEINNLKYKPNLVLGENSLDATKKHFDQQKELYGDNY Sbjct: 241 NPESEKIHVFSFLQTRGSVPIYWAEINNLKYKPNLVLGENSLDATKKHFDQQKELYGDNY 300 Query: 301 LVNLVNQKGHELPVKEGYESVVHALNDPKIHYVYFDFHHECRKMQWHRVKLLIDHLEKLG 360 LVNLVNQKGHELPVKEGYESVVHALNDPKIHYVYFDFHHECRKMQWHRVKLLIDHLEKLG Sbjct: 301 LVNLVNQKGHELPVKEGYESVVHALNDPKIHYVYFDFHHECRKMQWHRVKLLIDHLEKLG 360 Query: 361 LSNEDFFHKVIDSNGNTVEIVNEQHSVVRTNCMDCLDRTNVVQSVLAQWVLQKEFESADV 420 LSNEDFFHKVIDSNGNTVEIVNEQHSVVRTNCMDCLDRTNVVQSVLAQWVLQKEFESADV Sbjct: 361 LSNEDFFHKVIDSNGNTVEIVNEQHSVVRTNCMDCLDRTNVVQSVLAQWVLQKEFESADV 420 Query: 421 VATGSTWEDNAPLLTSYQNLWADNADAVSVAYSGTGALKTDFTRTGKRTRLGAFNDFLNS 480 VATGSTWEDNAPLLTSYQNLWADNADAVSVAYSGTGALKTDFTRTGKRTRLGAFNDFLNS Sbjct: 421 VATGSTWEDNAPLLTSYQNLWADNADAVSVAYSGTGALKTDFTRTGKRTRLGAFNDFLNS 480 Query: 481 ASRYYQNNWTDGPRQDSYDLFLGGFRPHTASIKSPFPDRRPVYIQLIPMIICAALTVLGA 540 ASRYYQNNWTDGPRQDSYDLFLGGFRPHTASIKSPFPDRRPVYIQLIPMIICAALTVLGA Sbjct: 481 ASRYYQNNWTDGPRQDSYDLFLGGFRPHTASIKSPFPDRRPVYIQLIPMIICAALTVLGA 540 Query: 541 TIFFPKDRFTSSKNLLYFAGASIVLALSTKFMFKNGIQFVNWPKLVDVGFLVVHQTHDKE 600 TIFFPKDRFTSSKNLLYFAGASIVLALSTKFMFKNGIQFVNWPKLVDVGFLVVHQTHDKE Sbjct: 541 TIFFPKDRFTSSKNLLYFAGASIVLALSTKFMFKNGIQFVNWPKLVDVGFLVVHQTHDKE 600 Query: 601 QQFKGLKYAQSPKFSKPDPLKRD 623 QQFKGLKYAQSPKFSKPDPLKRD Sbjct: 601 QQFKGLKYAQSPKFSKPDPLKRD 623 >3LWT-X nrPDB Length = 505 Score = 1049 bits (2712), Expect = 0.0, Method: Compositional matrix adjust. Identities = 504/504 (100%), Positives = 504/504 (100%) Query: 1 MTGPIVYVQNADGIFFKLAEGKGTNDAVIHLANQDQGVRVLGAEEFPVQGEVVKIASLMG 60 MTGPIVYVQNADGIFFKLAEGKGTNDAVIHLANQDQGVRVLGAEEFPVQGEVVKIASLMG Sbjct: 2 MTGPIVYVQNADGIFFKLAEGKGTNDAVIHLANQDQGVRVLGAEEFPVQGEVVKIASLMG 61 Query: 61 FIKLKLNRYAIIANTVEETGRFNGHVFYRVLQHSIVSTKFNSRIDSEEAEYIKLLELHLK 120 FIKLKLNRYAIIANTVEETGRFNGHVFYRVLQHSIVSTKFNSRIDSEEAEYIKLLELHLK Sbjct: 62 FIKLKLNRYAIIANTVEETGRFNGHVFYRVLQHSIVSTKFNSRIDSEEAEYIKLLELHLK 121 Query: 121 NSTFYFSYTYDLTNSLQRNEKVGPAASWKTADERFFWNHYLTEDLRNFAHQDPRIDSFIQ 180 NSTFYFSYTYDLTNSLQRNEKVGPAASWKTADERFFWNHYLTEDLRNFAHQDPRIDSFIQ Sbjct: 122 NSTFYFSYTYDLTNSLQRNEKVGPAASWKTADERFFWNHYLTEDLRNFAHQDPRIDSFIQ 181 Query: 181 PVIYGYAKTVDAVLNATPIVLGLITRRSIFRAGTRYFRRGVDKDGNVGNFNETEQILLAE 240 PVIYGYAKTVDAVLNATPIVLGLITRRSIFRAGTRYFRRGVDKDGNVGNFNETEQILLAE Sbjct: 182 PVIYGYAKTVDAVLNATPIVLGLITRRSIFRAGTRYFRRGVDKDGNVGNFNETEQILLAE 241 Query: 241 NPESEKIHVFSFLQTRGSVPIYWAEINNLKYKPNLVLGENSLDATKKHFDQQKELYGDNY 300 NPESEKIHVFSFLQTRGSVPIYWAEINNLKYKPNLVLGENSLDATKKHFDQQKELYGDNY Sbjct: 242 NPESEKIHVFSFLQTRGSVPIYWAEINNLKYKPNLVLGENSLDATKKHFDQQKELYGDNY 301 Query: 301 LVNLVNQKGHELPVKEGYESVVHALNDPKIHYVYFDFHHECRKMQWHRVKLLIDHLEKLG 360 LVNLVNQKGHELPVKEGYESVVHALNDPKIHYVYFDFHHECRKMQWHRVKLLIDHLEKLG Sbjct: 302 LVNLVNQKGHELPVKEGYESVVHALNDPKIHYVYFDFHHECRKMQWHRVKLLIDHLEKLG 361 Query: 361 LSNEDFFHKVIDSNGNTVEIVNEQHSVVRTNCMDCLDRTNVVQSVLAQWVLQKEFESADV 420 LSNEDFFHKVIDSNGNTVEIVNEQHSVVRTNCMDCLDRTNVVQSVLAQWVLQKEFESADV Sbjct: 362 LSNEDFFHKVIDSNGNTVEIVNEQHSVVRTNCMDCLDRTNVVQSVLAQWVLQKEFESADV 421 Query: 421 VATGSTWEDNAPLLTSYQNLWADNADAVSVAYSGTGALKTDFTRTGKRTRLGAFNDFLNS 480 VATGSTWEDNAPLLTSYQNLWADNADAVSVAYSGTGALKTDFTRTGKRTRLGAFNDFLNS Sbjct: 422 VATGSTWEDNAPLLTSYQNLWADNADAVSVAYSGTGALKTDFTRTGKRTRLGAFNDFLNS 481 Query: 481 ASRYYQNNWTDGPRQDSYDLFLGG 504 ASRYYQNNWTDGPRQDSYDLFLGG Sbjct: 482 ASRYYQNNWTDGPRQDSYDLFLGG 505 >5E84-A nrPDB Length = 606 Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust. Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 9/88 (10%) Query: 105 DSEE-AEYIKLLELHLKNSTFYFSYTYDLTNSLQRNEKVGPAAS-------WKTADERFF 156 D+E+ AE K L+ + SY Y L N + EK+G S K +E+ Sbjct: 517 DAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKETMEKAVEEKIE 576 Query: 157 W-NHYLTEDLRNFAHQDPRIDSFIQPVI 183 W + D+ +F + ++ +QP+I Sbjct: 577 WLESHQDADIEDFKAKKKELEEIVQPII 604 >3H0K-A nrPDB Length = 178 Score = 30.8 bits (68), Expect = 1.8, Method: Composition-based stats. Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 8/90 (8%) Query: 236 ILLAENPESEKIHVFSFLQTRGSVPIYWAEINNLKYKPNLVLGENSLDATKKHFDQQKEL 295 IL+ P S K L+ RG+ I +++ +Y GE +D K+ +E+ Sbjct: 3 ILITGMPGSGKSEFAKLLKERGAKVIVMSDVVRKRYSIEAKPGERLMDFAKR----LREI 58 Query: 296 YGDNYLVNL----VNQKGHELPVKEGYESV 321 YGD + L + H+L V +G S+ Sbjct: 59 YGDGVVARLCVEELGTSNHDLVVFDGVRSL 88 >6AZ3-B nrPDB Length = 402 Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust. Identities = 34/168 (20%), Positives = 70/168 (41%), Gaps = 24/168 (14%) Query: 209 IFRAGTRYFRRGVDKDGNVGNFNE-TEQILLAENPESEKIHVFSFLQTR---GSVPIYWA 264 +F+AG + R VD+ G+ N E E + + E P + + + QT ++ WA Sbjct: 47 VFKAGMTHIVRDVDRPGSKVNKKEVVEPVTILEAPPMVIVGIVGYRQTPVGLKTIGTVWA 106 Query: 265 EINNLKYKPNLVLGENSLDATKKHFDQQKELYGDNYLVNLVNQKGHELPVKEGYESVVHA 324 +++++ +N + + F +QK+ KEG + Sbjct: 107 HHTSVEFRRRYY--KNWKQSAQLAFSRQKQFAN----------------TKEGKVAEART 148 Query: 325 LN--DPKIHYVYFDFHHECRKMQWHRVKLLIDHLEKLGLSNEDFFHKV 370 LN K + H + RK++ HRV + H++++ ++ + K+ Sbjct: 149 LNAFAKKASVIRVIAHTQLRKLRNHRVGVKKAHVQEIQINGGNVAAKI 196 >6E4E-A nrPDB Length = 182 Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust. Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 5/60 (8%) Query: 72 IANTVEETGRFNGHVFYRVLQHSIVSTKFNSRIDSEEAEYIKLLELHLKNSTFYFSYTYD 131 + +++E+ + GHVF Q T F ID + YI ++E + TF+ YT++ Sbjct: 99 VIHSIEDIYQLPGHVFIFGGQ-----TLFEEMIDKVDDMYITVIEGKFRGDTFFPPYTFE 153 >3LG4-A nrPDB Length = 168 Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust. Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 5/60 (8%) Query: 72 IANTVEETGRFNGHVFYRVLQHSIVSTKFNSRIDSEEAEYIKLLELHLKNSTFYFSYTYD 131 + +++E+ + GHVF Q T F ID + YI ++E + TF+ YT++ Sbjct: 76 VIHSIEDIYQLPGHVFIIGGQ-----TLFEEMIDKVDDMYITVIEGKFRGDTFFPPYTFE 130 >2W9S-A nrPDB Length = 161 Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust. Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 5/60 (8%) Query: 72 IANTVEETGRFNGHVFYRVLQHSIVSTKFNSRIDSEEAEYIKLLELHLKNSTFYFSYTYD 131 + N+++E +GHVF Q T + + ID + YI +++ + TF+ YT++ Sbjct: 76 VINSLDEIKELSGHVFIFGGQ-----TLYEAMIDQVDDMYITVIDGKFQGDTFFPPYTFE 130 >5UBU-A nrPDB Length = 332 Score = 28.5 bits (62), Expect = 8.3, Method: Compositional matrix adjust. Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 15/92 (16%) Query: 219 RGVDKDG------NVGNFNETEQILLAENPESEKIHVFSFLQTRGSVPIYWAEINNLKYK 272 RGV+ G + G T+ + +P EK+ + + +YW+E + L YK Sbjct: 112 RGVNPHGICAMIPHFGGLTGTDLTAMLNDPLPEKVRMIKLDSEK----VYWSERHTLPYK 167 Query: 273 PNLVLGENSLDATKKHFDQQKELYGDNYLVNL 304 P++ +L + + D L DN+ N+ Sbjct: 168 PHI----GTLSVSPE-IDSINSLTPDNHGGNM 194 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4TU3-X nrPDB 1331 0.0 3LWT-X nrPDB 1077 0.0 Sequences not found previously or not previously below threshold: 6AZ3-B nrPDB 31 1.4 4V8P-BB nrPDB 31 2.0 3H0K-A nrPDB 30 2.3 5E84-A nrPDB 30 2.4 2W9S-A nrPDB 30 3.1 6E4E-A nrPDB 30 3.4 3LG4-A nrPDB 30 3.7 5UBU-A nrPDB 29 7.3 4HZC-A nrPDB 28 9.6 CONVERGED! >4TU3-X nrPDB Length = 623 Score = 1331 bits (3446), Expect = 0.0, Method: Composition-based stats. Identities = 623/623 (100%), Positives = 623/623 (100%) Query: 1 MTGPIVYVQNADGIFFKLAEGKGTNDAVIHLANQDQGVRVLGAEEFPVQGEVVKIASLMG 60 MTGPIVYVQNADGIFFKLAEGKGTNDAVIHLANQDQGVRVLGAEEFPVQGEVVKIASLMG Sbjct: 1 MTGPIVYVQNADGIFFKLAEGKGTNDAVIHLANQDQGVRVLGAEEFPVQGEVVKIASLMG 60 Query: 61 FIKLKLNRYAIIANTVEETGRFNGHVFYRVLQHSIVSTKFNSRIDSEEAEYIKLLELHLK 120 FIKLKLNRYAIIANTVEETGRFNGHVFYRVLQHSIVSTKFNSRIDSEEAEYIKLLELHLK Sbjct: 61 FIKLKLNRYAIIANTVEETGRFNGHVFYRVLQHSIVSTKFNSRIDSEEAEYIKLLELHLK 120 Query: 121 NSTFYFSYTYDLTNSLQRNEKVGPAASWKTADERFFWNHYLTEDLRNFAHQDPRIDSFIQ 180 NSTFYFSYTYDLTNSLQRNEKVGPAASWKTADERFFWNHYLTEDLRNFAHQDPRIDSFIQ Sbjct: 121 NSTFYFSYTYDLTNSLQRNEKVGPAASWKTADERFFWNHYLTEDLRNFAHQDPRIDSFIQ 180 Query: 181 PVIYGYAKTVDAVLNATPIVLGLITRRSIFRAGTRYFRRGVDKDGNVGNFNETEQILLAE 240 PVIYGYAKTVDAVLNATPIVLGLITRRSIFRAGTRYFRRGVDKDGNVGNFNETEQILLAE Sbjct: 181 PVIYGYAKTVDAVLNATPIVLGLITRRSIFRAGTRYFRRGVDKDGNVGNFNETEQILLAE 240 Query: 241 NPESEKIHVFSFLQTRGSVPIYWAEINNLKYKPNLVLGENSLDATKKHFDQQKELYGDNY 300 NPESEKIHVFSFLQTRGSVPIYWAEINNLKYKPNLVLGENSLDATKKHFDQQKELYGDNY Sbjct: 241 NPESEKIHVFSFLQTRGSVPIYWAEINNLKYKPNLVLGENSLDATKKHFDQQKELYGDNY 300 Query: 301 LVNLVNQKGHELPVKEGYESVVHALNDPKIHYVYFDFHHECRKMQWHRVKLLIDHLEKLG 360 LVNLVNQKGHELPVKEGYESVVHALNDPKIHYVYFDFHHECRKMQWHRVKLLIDHLEKLG Sbjct: 301 LVNLVNQKGHELPVKEGYESVVHALNDPKIHYVYFDFHHECRKMQWHRVKLLIDHLEKLG 360 Query: 361 LSNEDFFHKVIDSNGNTVEIVNEQHSVVRTNCMDCLDRTNVVQSVLAQWVLQKEFESADV 420 LSNEDFFHKVIDSNGNTVEIVNEQHSVVRTNCMDCLDRTNVVQSVLAQWVLQKEFESADV Sbjct: 361 LSNEDFFHKVIDSNGNTVEIVNEQHSVVRTNCMDCLDRTNVVQSVLAQWVLQKEFESADV 420 Query: 421 VATGSTWEDNAPLLTSYQNLWADNADAVSVAYSGTGALKTDFTRTGKRTRLGAFNDFLNS 480 VATGSTWEDNAPLLTSYQNLWADNADAVSVAYSGTGALKTDFTRTGKRTRLGAFNDFLNS Sbjct: 421 VATGSTWEDNAPLLTSYQNLWADNADAVSVAYSGTGALKTDFTRTGKRTRLGAFNDFLNS 480 Query: 481 ASRYYQNNWTDGPRQDSYDLFLGGFRPHTASIKSPFPDRRPVYIQLIPMIICAALTVLGA 540 ASRYYQNNWTDGPRQDSYDLFLGGFRPHTASIKSPFPDRRPVYIQLIPMIICAALTVLGA Sbjct: 481 ASRYYQNNWTDGPRQDSYDLFLGGFRPHTASIKSPFPDRRPVYIQLIPMIICAALTVLGA 540 Query: 541 TIFFPKDRFTSSKNLLYFAGASIVLALSTKFMFKNGIQFVNWPKLVDVGFLVVHQTHDKE 600 TIFFPKDRFTSSKNLLYFAGASIVLALSTKFMFKNGIQFVNWPKLVDVGFLVVHQTHDKE Sbjct: 541 TIFFPKDRFTSSKNLLYFAGASIVLALSTKFMFKNGIQFVNWPKLVDVGFLVVHQTHDKE 600 Query: 601 QQFKGLKYAQSPKFSKPDPLKRD 623 QQFKGLKYAQSPKFSKPDPLKRD Sbjct: 601 QQFKGLKYAQSPKFSKPDPLKRD 623 >3LWT-X nrPDB Length = 505 Score = 1077 bits (2786), Expect = 0.0, Method: Composition-based stats. Identities = 504/504 (100%), Positives = 504/504 (100%) Query: 1 MTGPIVYVQNADGIFFKLAEGKGTNDAVIHLANQDQGVRVLGAEEFPVQGEVVKIASLMG 60 MTGPIVYVQNADGIFFKLAEGKGTNDAVIHLANQDQGVRVLGAEEFPVQGEVVKIASLMG Sbjct: 2 MTGPIVYVQNADGIFFKLAEGKGTNDAVIHLANQDQGVRVLGAEEFPVQGEVVKIASLMG 61 Query: 61 FIKLKLNRYAIIANTVEETGRFNGHVFYRVLQHSIVSTKFNSRIDSEEAEYIKLLELHLK 120 FIKLKLNRYAIIANTVEETGRFNGHVFYRVLQHSIVSTKFNSRIDSEEAEYIKLLELHLK Sbjct: 62 FIKLKLNRYAIIANTVEETGRFNGHVFYRVLQHSIVSTKFNSRIDSEEAEYIKLLELHLK 121 Query: 121 NSTFYFSYTYDLTNSLQRNEKVGPAASWKTADERFFWNHYLTEDLRNFAHQDPRIDSFIQ 180 NSTFYFSYTYDLTNSLQRNEKVGPAASWKTADERFFWNHYLTEDLRNFAHQDPRIDSFIQ Sbjct: 122 NSTFYFSYTYDLTNSLQRNEKVGPAASWKTADERFFWNHYLTEDLRNFAHQDPRIDSFIQ 181 Query: 181 PVIYGYAKTVDAVLNATPIVLGLITRRSIFRAGTRYFRRGVDKDGNVGNFNETEQILLAE 240 PVIYGYAKTVDAVLNATPIVLGLITRRSIFRAGTRYFRRGVDKDGNVGNFNETEQILLAE Sbjct: 182 PVIYGYAKTVDAVLNATPIVLGLITRRSIFRAGTRYFRRGVDKDGNVGNFNETEQILLAE 241 Query: 241 NPESEKIHVFSFLQTRGSVPIYWAEINNLKYKPNLVLGENSLDATKKHFDQQKELYGDNY 300 NPESEKIHVFSFLQTRGSVPIYWAEINNLKYKPNLVLGENSLDATKKHFDQQKELYGDNY Sbjct: 242 NPESEKIHVFSFLQTRGSVPIYWAEINNLKYKPNLVLGENSLDATKKHFDQQKELYGDNY 301 Query: 301 LVNLVNQKGHELPVKEGYESVVHALNDPKIHYVYFDFHHECRKMQWHRVKLLIDHLEKLG 360 LVNLVNQKGHELPVKEGYESVVHALNDPKIHYVYFDFHHECRKMQWHRVKLLIDHLEKLG Sbjct: 302 LVNLVNQKGHELPVKEGYESVVHALNDPKIHYVYFDFHHECRKMQWHRVKLLIDHLEKLG 361 Query: 361 LSNEDFFHKVIDSNGNTVEIVNEQHSVVRTNCMDCLDRTNVVQSVLAQWVLQKEFESADV 420 LSNEDFFHKVIDSNGNTVEIVNEQHSVVRTNCMDCLDRTNVVQSVLAQWVLQKEFESADV Sbjct: 362 LSNEDFFHKVIDSNGNTVEIVNEQHSVVRTNCMDCLDRTNVVQSVLAQWVLQKEFESADV 421 Query: 421 VATGSTWEDNAPLLTSYQNLWADNADAVSVAYSGTGALKTDFTRTGKRTRLGAFNDFLNS 480 VATGSTWEDNAPLLTSYQNLWADNADAVSVAYSGTGALKTDFTRTGKRTRLGAFNDFLNS Sbjct: 422 VATGSTWEDNAPLLTSYQNLWADNADAVSVAYSGTGALKTDFTRTGKRTRLGAFNDFLNS 481 Query: 481 ASRYYQNNWTDGPRQDSYDLFLGG 504 ASRYYQNNWTDGPRQDSYDLFLGG Sbjct: 482 ASRYYQNNWTDGPRQDSYDLFLGG 505 >6AZ3-B nrPDB Length = 402 Score = 31.2 bits (69), Expect = 1.4, Method: Composition-based stats. Identities = 35/173 (20%), Positives = 72/173 (41%), Gaps = 24/173 (13%) Query: 204 ITRRSIFRAGTRYFRRGVDKDGNVGNFNE-TEQILLAENPESEKIHVFSFLQTR---GSV 259 +T +F+AG + R VD+ G+ N E E + + E P + + + QT ++ Sbjct: 42 LTSFMVFKAGMTHIVRDVDRPGSKVNKKEVVEPVTILEAPPMVIVGIVGYRQTPVGLKTI 101 Query: 260 PIYWAEINNLKYKPNLVLGENSLDATKKHFDQQKELYGDNYLVNLVNQKGHELPVKEGYE 319 WA +++++ +N + + F +QK+ KEG Sbjct: 102 GTVWAHHTSVEFRRRYY--KNWKQSAQLAFSRQKQFAN----------------TKEGKV 143 Query: 320 SVVHALN--DPKIHYVYFDFHHECRKMQWHRVKLLIDHLEKLGLSNEDFFHKV 370 + LN K + H + RK++ HRV + H++++ ++ + K+ Sbjct: 144 AEARTLNAFAKKASVIRVIAHTQLRKLRNHRVGVKKAHVQEIQINGGNVAAKI 196 >4V8P-BB nrPDB Length = 391 Score = 30.8 bits (68), Expect = 2.0, Method: Composition-based stats. Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 21/124 (16%) Query: 210 FRAGTRYFRRGVDKDGNVGNFNE-TEQILLAENPESEKIHVFSFLQT-RG--SVPIYWAE 265 F+AG + R VD+ G+ N E E + + E P + V ++ T RG ++ WA+ Sbjct: 49 FKAGMTHILREVDRSGSRHNKKEVVEAVTVIECPPMTIVGVVGYIDTPRGLRALTTVWAK 108 Query: 266 I--NNLKYKPNLVLGENSLDATKKHFDQQKELYGDNYLVNLVNQKGHELPVK--EGYESV 321 NN K + +N ++ KK F ++ + +QK +L +K E Y SV Sbjct: 109 TIDNNTKKR----FYKNWANSNKKAFTHHEKNF---------DQKAQDLLLKRIEKYCSV 155 Query: 322 VHAL 325 V + Sbjct: 156 VRVI 159 >3H0K-A nrPDB Length = 178 Score = 30.4 bits (67), Expect = 2.3, Method: Composition-based stats. Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 8/90 (8%) Query: 236 ILLAENPESEKIHVFSFLQTRGSVPIYWAEINNLKYKPNLVLGENSLDATKKHFDQQKEL 295 IL+ P S K L+ RG+ I +++ +Y GE +D K+ +E+ Sbjct: 3 ILITGMPGSGKSEFAKLLKERGAKVIVMSDVVRKRYSIEAKPGERLMDFAKR----LREI 58 Query: 296 YGDNYLVNL----VNQKGHELPVKEGYESV 321 YGD + L + H+L V +G S+ Sbjct: 59 YGDGVVARLCVEELGTSNHDLVVFDGVRSL 88 >5E84-A nrPDB Length = 606 Score = 30.4 bits (67), Expect = 2.4, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 55/141 (39%), Gaps = 27/141 (19%) Query: 62 IKLKLNRYAIIANTVEETGRFNGHVFYRVLQHSIVSTKFNSRIDSEE-----------AE 110 + +++ I+ T E+ G N ++ I T +R+ EE AE Sbjct: 472 VTFEIDVNGILRVTAEDKGTGN--------KNKITITNDQNRLTPEEIERMVNDAEKFAE 523 Query: 111 YIKLLELHLKNSTFYFSYTYDLTNSLQRNEKVGPAASW-------KTADERFFW-NHYLT 162 K L+ + SY Y L N + EK+G S K +E+ W + Sbjct: 524 EDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKETMEKAVEEKIEWLESHQD 583 Query: 163 EDLRNFAHQDPRIDSFIQPVI 183 D+ +F + ++ +QP+I Sbjct: 584 ADIEDFKAKKKELEEIVQPII 604 >2W9S-A nrPDB Length = 161 Score = 30.0 bits (66), Expect = 3.1, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 5/60 (8%) Query: 72 IANTVEETGRFNGHVFYRVLQHSIVSTKFNSRIDSEEAEYIKLLELHLKNSTFYFSYTYD 131 + N+++E +GHVF Q T + + ID + YI +++ + TF+ YT++ Sbjct: 76 VINSLDEIKELSGHVFIFGGQ-----TLYEAMIDQVDDMYITVIDGKFQGDTFFPPYTFE 130 >6E4E-A nrPDB Length = 182 Score = 30.0 bits (66), Expect = 3.4, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 5/60 (8%) Query: 72 IANTVEETGRFNGHVFYRVLQHSIVSTKFNSRIDSEEAEYIKLLELHLKNSTFYFSYTYD 131 + +++E+ + GHVF Q T F ID + YI ++E + TF+ YT++ Sbjct: 99 VIHSIEDIYQLPGHVFIFGGQ-----TLFEEMIDKVDDMYITVIEGKFRGDTFFPPYTFE 153 >3LG4-A nrPDB Length = 168 Score = 29.6 bits (65), Expect = 3.7, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 5/60 (8%) Query: 72 IANTVEETGRFNGHVFYRVLQHSIVSTKFNSRIDSEEAEYIKLLELHLKNSTFYFSYTYD 131 + +++E+ + GHVF Q T F ID + YI ++E + TF+ YT++ Sbjct: 76 VIHSIEDIYQLPGHVFIIGGQ-----TLFEEMIDKVDDMYITVIEGKFRGDTFFPPYTFE 130 >5UBU-A nrPDB Length = 332 Score = 28.8 bits (63), Expect = 7.3, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 10/63 (15%) Query: 219 RGVDKDG------NVGNFNETEQILLAENPESEKIHVFSFLQTRGSVPIYWAEINNLKYK 272 RGV+ G + G T+ + +P EK+ + S +YW+E + L YK Sbjct: 112 RGVNPHGICAMIPHFGGLTGTDLTAMLNDPLPEKVRMIKL----DSEKVYWSERHTLPYK 167 Query: 273 PNL 275 P++ Sbjct: 168 PHI 170 >4HZC-A nrPDB Length = 281 Score = 28.5 bits (62), Expect = 9.6, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 16/28 (57%) Query: 157 WNHYLTEDLRNFAHQDPRIDSFIQPVIY 184 W+H L D++ +DP F+ PV+Y Sbjct: 87 WSHVLRVDIQAVYDRDPAYSRFMDPVLY 114 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.320 0.136 0.410 Lambda K H 0.267 0.0431 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 28,649,328 Number of Sequences: 36641 Number of extensions: 1332169 Number of successful extensions: 2797 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 5 Number of HSP's successfully gapped in prelim test: 21 Number of HSP's that attempted gapping in prelim test: 2790 Number of HSP's gapped (non-prelim): 26 length of query: 623 length of database: 10,336,785 effective HSP length: 103 effective length of query: 520 effective length of database: 6,562,762 effective search space: 3412636240 effective search space used: 3412636240 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 62 (28.4 bits)