BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P32321 (178 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 2W4L-A nrPDB 356 3e-99 5C2O-A nrPDB 65 2e-11 4P9D-A nrPDB 62 1e-10 1VQ2-A nrPDB 62 2e-10 1WWR-A nrPDB 45 2e-05 2B3Z-A nrPDB 43 8e-05 1Z3A-A nrPDB 40 4e-04 2HXV-A nrPDB 39 0.001 3OCQ-A nrPDB 38 0.002 2B3J-A nrPDB 38 0.003 2NX8-A nrPDB 35 0.018 3G8Q-A nrPDB 31 0.31 1G61-A nrPDB 30 0.68 1YS4-A nrPDB 29 1.1 1ZCZ-A nrPDB 28 3.1 2OLS-A nrPDB 27 5.0 1JRA-A nrPDB 27 6.1 3ZS6-A nrPDB 26 8.9 5YAT-A nrPDB 26 9.2 >2W4L-A nrPDB Length = 178 Score = 356 bits (913), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 169/171 (98%), Positives = 170/171 (99%) Query: 4 VSCKKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNSENKIVGIGYNGMPNGCSDD 63 +SCKKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNSENKIVGIGYNGMPNGCSDD Sbjct: 1 MSCKKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNSENKIVGIGYNGMPNGCSDD 60 Query: 64 VLPWRRTAENKLDTKYPYVCHAELNAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIK 123 VLPWRRTAENKLDTKYPYVCHAELNAIMNKN TDVKGCSMYVALFPCNECAKLIIQAGIK Sbjct: 61 VLPWRRTAENKLDTKYPYVCHAELNAIMNKNLTDVKGCSMYVALFPCNECAKLIIQAGIK 120 Query: 124 EVIFMSDKYHDSDEATAARLLFNMAGVTFRKFIPKCSKIVIDFDSINSRPS 174 EVIFMSDKYHDSDEATAARLLFNMAGVTFRKFIPKCSKIVIDFDSINSRPS Sbjct: 121 EVIFMSDKYHDSDEATAARLLFNMAGVTFRKFIPKCSKIVIDFDSINSRPS 171 >5C2O-A nrPDB Length = 184 Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 42/120 (35%), Positives = 61/120 (50%), Gaps = 13/120 (10%) Query: 13 LEWPEYFMAVAFLSAQRSKDPNSQVGACIVNSENKIVGIGYNGM---PNGCSDDVLPWRR 69 L W +YFMA A L ++RS + VGA +V + N+I+ GYNG + C DDV Sbjct: 39 LSWQDYFMANAELISKRSTCNRAYVGAVLVKN-NRIIATGYNGGVADTDNC-DDV----- 91 Query: 70 TAENKLDTKYPYVCHAELNAIMN--KNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIF 127 D HAE+NA++ K +YV FPC C K ++QAG+K++ + Sbjct: 92 -GHEMEDGHCIRTVHAEMNALIQCAKEGISANNTEIYVTHFPCINCTKALLQAGVKKITY 150 >4P9D-A nrPDB Length = 138 Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 9/119 (7%) Query: 14 EWPEYFMAVAFLSAQRSKDPNSQVGACIVNSENKIVGIGYNGMPNGCSDDVLPWRRTAEN 73 E E +M A L +Q S +VGA +V + I+ G+NG P+G + + N Sbjct: 7 EIKEAYMKTAELFSQVSNCKRMKVGAIVVKN-GSILAHGWNGTPSGFHTNCCELEDGSTN 65 Query: 74 KLDTKYPYVCHAELNAI--MNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSD 130 P+V HAE NA+ M K+S + G ++ PC +C+K+I QAG+K+V + ++ Sbjct: 66 ------PFVLHAEQNALVKMAKSSESIDGSELFCTHSPCPDCSKMIAQAGVKKVYYRNE 118 >1VQ2-A nrPDB Length = 193 Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 52/189 (27%), Positives = 90/189 (47%), Gaps = 45/189 (23%) Query: 20 MAVAFLSAQRSKDPNSQVGACIVNSENKIVGIGYNGMPNG---CSDDVLP--W------- 67 + +A+L +Q SK + +VGA ++ +I+ GYNG P G C D W Sbjct: 7 LQIAYLVSQESKCCSWKVGA-VIEKNGRIISTGYNGSPAGGVNCCDYAAEQGWLLNKPKH 65 Query: 68 ------------------------RRTAENKLDTKYPYVCHAELNAIM--NKNSTDVKGC 101 R+A ++ +K HAELNAI+ +N + ++G Sbjct: 66 AIIQGHKPECVSFGSTDRFVLAKEHRSAHSEWSSKNEI--HAELNAILFAAENGSSIEGA 123 Query: 102 SMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSDEATAARLLFNMAGVTFRKFIPKCSK 161 +MYV L PC +CAK I Q+GIK++++ + +D ++ +L N F +PK + Sbjct: 124 TMYVTLSPCPDCAKAIAQSGIKKLVYC--ETYDKNKPGWDDILRNAGIEVFN--VPKKNL 179 Query: 162 IVIDFDSIN 170 +++++IN Sbjct: 180 NKLNWENIN 188 >1WWR-A nrPDB Length = 171 Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 26/123 (21%) Query: 17 EYFMAVAFLSAQRSKDPNS-QVGACIVNSENKIVGIGYNGMPNGCSDDVLPWRRTAENKL 75 EYF+ VA A+R+ + VGA IV E +I+ +N + Sbjct: 24 EYFLKVALREAKRAFEKGEVPVGAIIVK-EGEIISKAHNSVE------------------ 64 Query: 76 DTKYPYVCHAELNAIMNK----NSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIFMS-D 130 + K P HAE+ AI N+ ++GC +YV L PC C+ ++ + I++VIF + D Sbjct: 65 ELKDP-TAHAEMLAIKEACRRLNTKYLEGCELYVTLEPCIMCSYALVLSRIEKVIFSALD 123 Query: 131 KYH 133 K H Sbjct: 124 KKH 126 >2B3Z-A nrPDB Length = 373 Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 39/151 (25%) Query: 17 EYFMAVAFLSAQRSK---DPNSQVGACIVNSENKIVGIGYNGMPNGCSDDVLPWRRTAEN 73 EY+M +A A++ + + N VGA +V + +IVG+G + Sbjct: 15 EYYMKLALDLAKQGEGQTESNPLVGAVVVK-DGQIVGMGAH------------------- 54 Query: 74 KLDTKYPYVCHAELNAIMNKNSTDVKGCSMYVALFPCNE------CAKLIIQAGIKEVIF 127 KY HAE++AI + +G +YV L PC+ CA+LII +GIK V Sbjct: 55 ---LKYGE-AHAEVHAI-HMAGAHAEGADIYVTLEPCSHYGKTPPCAELIINSGIKRVFV 109 Query: 128 MSDKYHDSDEATAARLLFNM--AGVTFRKFI 156 D + A R + M AG+ R+ I Sbjct: 110 ---AMRDPNPLVAGRGISMMKEAGIEVREGI 137 >1Z3A-A nrPDB Length = 168 Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 36/163 (22%) Query: 17 EYFMAVAFLSAQRSKDPNS-QVGACIVNSENKIVGIGYNGMPNGCSDDVLPWRRTAENKL 75 EY+M A A+R+ D VGA +V++ N+++G G+N P G D Sbjct: 10 EYWMRHALTLAKRAWDEREVPVGAVLVHN-NRVIGEGWN-RPIGRHDPT----------- 56 Query: 76 DTKYPYVCHAELNAI----MNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDK 131 HAE+ A+ + + + ++YV L PC CA +I + I V+F + Sbjct: 57 -------AHAEIMALRQGGLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGA-- 107 Query: 132 YHDSDEATAARLL--FNMAGVTFRKFIP------KCSKIVIDF 166 D+ A L+ + G+ R I +C+ ++ DF Sbjct: 108 -RDAKTGAAGSLMDVLHHPGMNHRVEITEGILADECAALLSDF 149 >2HXV-A nrPDB Length = 360 Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/123 (28%), Positives = 52/123 (42%), Gaps = 39/123 (31%) Query: 17 EYFMAVAFLSAQRSK---DPNSQVGACIVNSENKIVGIGYNGMPNGCSDDVLPWRRTAEN 73 E FM A A++ +PN VGA +V + +I+ G+ Sbjct: 15 ETFMKRAIELAKKGLGRVNPNPPVGAVVVK-DGRIIAEGF-------------------- 53 Query: 74 KLDTKYPYVC--HAELNAI--MNKNSTDVKGCSMYVALFPCNE------CAKLIIQAGIK 123 +PY HAE AI K D++G ++ V L PC+ C LII++GIK Sbjct: 54 -----HPYFGGPHAERMAIESARKKGEDLRGATLIVTLEPCDHHGKTPPCTDLIIESGIK 108 Query: 124 EVI 126 V+ Sbjct: 109 TVV 111 >3OCQ-A nrPDB Length = 183 Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust. Identities = 40/163 (24%), Positives = 70/163 (42%), Gaps = 36/163 (22%) Query: 17 EYFMAVAFLSAQRSKDPNS-QVGACIVNSENKIVGIGYNGMPNGCSDDVLPWRRTAENKL 75 EY+M A A+R+ D VGA +V++ ++++G G+N P G D Sbjct: 20 EYWMRHALTLAKRAWDEREVPVGAVLVHN-HRVIGEGWN-RPIGRHDPT----------- 66 Query: 76 DTKYPYVCHAELNAIMNKN----STDVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDK 131 HAE+ A+ + + ++YV L PC CA ++ + I V+F + Sbjct: 67 -------AHAEIMALRQGGLVLQNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGA-- 117 Query: 132 YHDSDEATAARLL--FNMAGVTFRKFI------PKCSKIVIDF 166 D+ A L+ + G+ R I +C+ ++ DF Sbjct: 118 -RDAKTGAAGSLIDVLHHPGMNHRVEIIEGVLRDECATLLSDF 159 >2B3J-A nrPDB Length = 159 Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust. Identities = 35/158 (22%), Positives = 63/158 (39%), Gaps = 28/158 (17%) Query: 18 YFMAVAFLSAQRSKDPNSQVGACIVNSENKIVGIGYNGMPNGCSDDVLPWRRTAENKLDT 77 YFM +A A+++ I+ +++++ +N R T + Sbjct: 9 YFMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARAHN------------LRETLQQP--- 53 Query: 78 KYPYVCHAELNAIMNK----NSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYH 133 HAE AI S ++GC++YV L PC CA I+ + I V++ +D Sbjct: 54 ----TAHAEHIAIERAAKVLGSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPK 109 Query: 134 DSDEATAARLL----FNMAGVTFRKFIPK-CSKIVIDF 166 + LL FN + + + + CS ++ F Sbjct: 110 GGCSGSLMNLLQQSNFNHRAIVDKGVLKEACSTLLTTF 147 >2NX8-A nrPDB Length = 179 Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust. Identities = 29/119 (24%), Positives = 50/119 (42%), Gaps = 23/119 (19%) Query: 13 LEWPEYFMAVAFLSAQRSKDPNSQVGACIVNSENKIVGIGYNGMPNGCSDDVLPWRRTAE 72 LE YFM A +++S C++ + +I+G G+N R Sbjct: 13 LEEQTYFMQEALKESEKSLQKAEIPIGCVIVKDGEIIGRGHNA-------------REES 59 Query: 73 NKLDTKYPYVCHAELNAIMNKNSTD----VKGCSMYVALFPCNECAKLIIQAGIKEVIF 127 N+ + HAE+ AI N+ + + +++V + PC C+ I A I VI+ Sbjct: 60 NQ------AIMHAEMMAINEANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIY 112 >3G8Q-A nrPDB Length = 278 Score = 30.8 bits (68), Expect = 0.31, Method: Compositional matrix adjust. Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%) Query: 84 HAELNAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIFMS 129 HAE + DV+G ++V PC CA+ + +AG+ V+++ Sbjct: 44 HAERKLVRRH---DVEGKVVFVTARPCLYCARELAEAGVAGVVYLG 86 >1G61-A nrPDB Length = 228 Score = 29.6 bits (65), Expect = 0.68, Method: Compositional matrix adjust. Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Query: 9 RDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIV-NSENKIVG 50 DD LE+ + V ++ + + VGACI+ NS+ +VG Sbjct: 168 EDDELEFLKSLFKVEYIGKGTANKGTTSVGACIIANSKGAVVG 210 >1YS4-A nrPDB Length = 354 Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust. Identities = 12/41 (29%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Query: 39 ACIVNSENKIVGIGYNGMPN-GCSDDVLPWRRTAENKLDTK 78 A + + + G GYNG+P+ D+++P+ + E K+ T+ Sbjct: 177 AVFIATMQAVSGAGYNGVPSMAILDNLIPFIKNEEEKMQTE 217 >1ZCZ-A nrPDB Length = 464 Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust. Identities = 36/156 (23%), Positives = 55/156 (35%), Gaps = 9/156 (5%) Query: 3 EVSCKKRDDYLEWPEYFMAVAFLSAQRSKDPNSQ----VGACIVNSENKIVGIGYNGMPN 58 +V K DY W MA L K P VG + E + + Y + Sbjct: 306 KVRLLKPGDYASWAGK-MAFGSLVLSERKYPEGNFELVVGEPLSEKELEDLEFAYRVVEG 364 Query: 59 GCSDDVLPWRRTAENKLDTKYPYVCHAELNAIMNKNSTDVKGCSMYVALFPCNECAKLII 118 S+ VL + + + P A A + + A FP + +++ Sbjct: 365 AKSNAVLIAKDGVTVGIGSGQPSRKRAAWIATVMAGEKAKGAVAASDAFFPFPDSLEILA 424 Query: 119 QAGIKEVIFMSDKYHDSDEATAARLLFNMAGVTFRK 154 QAG+K V+ D + AR L G+TF K Sbjct: 425 QAGVKAVVAPLGSIRDEEVIEKAREL----GITFYK 456 >2OLS-A nrPDB Length = 794 Score = 26.9 bits (58), Expect = 5.0, Method: Compositional matrix adjust. Identities = 13/33 (39%), Positives = 17/33 (51%) Query: 75 LDTKYPYVCHAELNAIMNKNSTDVKGCSMYVAL 107 LDT +P AE+ A NK D G + VA+ Sbjct: 92 LDTPFPEQLDAEIEAAWNKMVADAGGADISVAV 124 >1JRA-A nrPDB Length = 117 Score = 26.6 bits (57), Expect = 6.1, Method: Compositional matrix adjust. Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 11/70 (15%) Query: 102 SMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSDEATAARL----LFNMAGVTFRKFIP 157 +Y L+PC EC+ ++ K + S + TAA + + N +K I Sbjct: 43 GLYAELYPCGECSYHFVKLIEKYPVQTSSR-------TAAAMWGCHIHNKVNEYLKKDIY 95 Query: 158 KCSKIVIDFD 167 C+ I+ D+D Sbjct: 96 DCATILEDYD 105 >3ZS6-A nrPDB Length = 506 Score = 26.2 bits (56), Expect = 8.9, Method: Compositional matrix adjust. Identities = 13/36 (36%), Positives = 18/36 (50%) Query: 54 NGMPNGCSDDVLPWRRTAENKLDTKYPYVCHAELNA 89 NG P +D V W+R A+ K +KY + NA Sbjct: 76 NGQPVTAADFVYAWQRLADPKTGSKYTILVEFVKNA 111 >5YAT-A nrPDB Length = 350 Score = 26.2 bits (56), Expect = 9.2, Method: Compositional matrix adjust. Identities = 13/36 (36%), Positives = 20/36 (55%) Query: 54 NGMPNGCSDDVLPWRRTAENKLDTKYPYVCHAELNA 89 NG P D +P ++ E ++ KY VCH +L+A Sbjct: 17 NGGPLEYKDIPVPKPKSNELLINVKYSGVCHTDLHA 52 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 2W4L-A nrPDB 267 2e-72 1VQ2-A nrPDB 147 2e-36 4P9D-A nrPDB 135 1e-32 1Z3A-A nrPDB 135 1e-32 5C2O-A nrPDB 130 4e-31 2B3Z-A nrPDB 108 1e-24 1WWR-A nrPDB 99 8e-22 2HXV-A nrPDB 93 6e-20 Sequences not found previously or not previously below threshold: 3OCQ-A nrPDB 127 3e-30 2G6V-A nrPDB 85 2e-17 2B3J-A nrPDB 78 1e-15 2NX8-A nrPDB 74 3e-14 2A8N-A nrPDB 66 1e-11 3ZPC-A nrPDB 66 1e-11 1TIY-A nrPDB 61 3e-10 1RB7-A nrPDB 59 9e-10 5JFY-A nrPDB 56 1e-08 3DH1-A nrPDB 48 2e-06 4LD2-A nrPDB 44 3e-05 3G8Q-A nrPDB 38 0.002 3L5A-A nrPDB 33 0.073 1ZCZ-A nrPDB 32 0.13 5W3V-B nrPDB 31 0.21 1JRA-A nrPDB 29 0.80 4EG2-A nrPDB 29 1.5 4FGM-A nrPDB 28 1.8 3VM8-A nrPDB 28 1.8 3DMO-A nrPDB 28 3.3 5Z98-A nrPDB 27 3.7 2FR6-A nrPDB 27 3.9 1UB2-A nrPDB 26 8.8 >2W4L-A nrPDB Length = 178 Score = 267 bits (681), Expect = 2e-72, Method: Composition-based stats. Identities = 169/171 (98%), Positives = 170/171 (99%) Query: 4 VSCKKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNSENKIVGIGYNGMPNGCSDD 63 +SCKKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNSENKIVGIGYNGMPNGCSDD Sbjct: 1 MSCKKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNSENKIVGIGYNGMPNGCSDD 60 Query: 64 VLPWRRTAENKLDTKYPYVCHAELNAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIK 123 VLPWRRTAENKLDTKYPYVCHAELNAIMNKN TDVKGCSMYVALFPCNECAKLIIQAGIK Sbjct: 61 VLPWRRTAENKLDTKYPYVCHAELNAIMNKNLTDVKGCSMYVALFPCNECAKLIIQAGIK 120 Query: 124 EVIFMSDKYHDSDEATAARLLFNMAGVTFRKFIPKCSKIVIDFDSINSRPS 174 EVIFMSDKYHDSDEATAARLLFNMAGVTFRKFIPKCSKIVIDFDSINSRPS Sbjct: 121 EVIFMSDKYHDSDEATAARLLFNMAGVTFRKFIPKCSKIVIDFDSINSRPS 171 >1VQ2-A nrPDB Length = 193 Score = 147 bits (371), Expect = 2e-36, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 88/189 (46%), Gaps = 45/189 (23%) Query: 20 MAVAFLSAQRSKDPNSQVGACIVNSENKIVGIGYNGMPNG---CSDDVLPW--------- 67 + +A+L +Q SK + +VGA I +I+ GYNG P G C D Sbjct: 7 LQIAYLVSQESKCCSWKVGAVI-EKNGRIISTGYNGSPAGGVNCCDYAAEQGWLLNKPKH 65 Query: 68 ------------------------RRTAENKLDTKYPYVCHAELNAIM--NKNSTDVKGC 101 R+A ++ +K HAELNAI+ +N + ++G Sbjct: 66 AIIQGHKPECVSFGSTDRFVLAKEHRSAHSEWSSKNEI--HAELNAILFAAENGSSIEGA 123 Query: 102 SMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSDEATAARLLFNMAGVTFRKFIPKCSK 161 +MYV L PC +CAK I Q+GIK++++ + +D ++ +L N F +PK + Sbjct: 124 TMYVTLSPCPDCAKAIAQSGIKKLVYC--ETYDKNKPGWDDILRNAGIEVFN--VPKKNL 179 Query: 162 IVIDFDSIN 170 +++++IN Sbjct: 180 NKLNWENIN 188 >4P9D-A nrPDB Length = 138 Score = 135 bits (339), Expect = 1e-32, Method: Composition-based stats. Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 9/119 (7%) Query: 14 EWPEYFMAVAFLSAQRSKDPNSQVGACIVNSENKIVGIGYNGMPNGCSDDVLPWRRTAEN 73 E E +M A L +Q S +VGA +V + I+ G+NG P+G + + N Sbjct: 7 EIKEAYMKTAELFSQVSNCKRMKVGAIVVKN-GSILAHGWNGTPSGFHTNCCELEDGSTN 65 Query: 74 KLDTKYPYVCHAELNAI--MNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSD 130 P+V HAE NA+ M K+S + G ++ PC +C+K+I QAG+K+V + ++ Sbjct: 66 ------PFVLHAEQNALVKMAKSSESIDGSELFCTHSPCPDCSKMIAQAGVKKVYYRNE 118 >1Z3A-A nrPDB Length = 168 Score = 135 bits (339), Expect = 1e-32, Method: Composition-based stats. Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 36/163 (22%) Query: 17 EYFMAVAFLSAQRSKDPNS-QVGACIVNSENKIVGIGYNGMPNGCSDDVLPWRRTAENKL 75 EY+M A A+R+ D VGA +V++ N+++G G+N P G D Sbjct: 10 EYWMRHALTLAKRAWDEREVPVGAVLVHN-NRVIGEGWN-RPIGRHDP------------ 55 Query: 76 DTKYPYVCHAELNAI----MNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDK 131 HAE+ A+ + + + ++YV L PC CA +I + I V+F + Sbjct: 56 ------TAHAEIMALRQGGLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGA-- 107 Query: 132 YHDSDEATAARLL--FNMAGVTFRKFIP------KCSKIVIDF 166 D+ A L+ + G+ R I +C+ ++ DF Sbjct: 108 -RDAKTGAAGSLMDVLHHPGMNHRVEITEGILADECAALLSDF 149 >5C2O-A nrPDB Length = 184 Score = 130 bits (326), Expect = 4e-31, Method: Composition-based stats. Identities = 39/117 (33%), Positives = 57/117 (48%), Gaps = 7/117 (5%) Query: 13 LEWPEYFMAVAFLSAQRSKDPNSQVGACIVNSENKIVGIGYNGMPNGCSDDVLPWRRTAE 72 L W +YFMA A L ++RS + VGA +V + N+I+ GYNG D Sbjct: 39 LSWQDYFMANAELISKRSTCNRAYVGAVLVKN-NRIIATGYNGGVA----DTDNCDDVGH 93 Query: 73 NKLDTKYPYVCHAELNAIMN--KNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIF 127 D HAE+NA++ K +YV FPC C K ++QAG+K++ + Sbjct: 94 EMEDGHCIRTVHAEMNALIQCAKEGISANNTEIYVTHFPCINCTKALLQAGVKKITY 150 >3OCQ-A nrPDB Length = 183 Score = 127 bits (318), Expect = 3e-30, Method: Composition-based stats. Identities = 40/163 (24%), Positives = 70/163 (42%), Gaps = 36/163 (22%) Query: 17 EYFMAVAFLSAQRSKDPNS-QVGACIVNSENKIVGIGYNGMPNGCSDDVLPWRRTAENKL 75 EY+M A A+R+ D VGA +V++ +++G G+N P G D Sbjct: 20 EYWMRHALTLAKRAWDEREVPVGAVLVHNH-RVIGEGWN-RPIGRHDP------------ 65 Query: 76 DTKYPYVCHAELNAI----MNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDK 131 HAE+ A+ + + + ++YV L PC CA ++ + I V+F + Sbjct: 66 ------TAHAEIMALRQGGLVLQNYRLLDTTLYVTLEPCVMCAGAMVHSRIGRVVFGA-- 117 Query: 132 YHDSDEATAARLL--FNMAGVTFRKFI------PKCSKIVIDF 166 D+ A L+ + G+ R I +C+ ++ DF Sbjct: 118 -RDAKTGAAGSLIDVLHHPGMNHRVEIIEGVLRDECATLLSDF 159 >2B3Z-A nrPDB Length = 373 Score = 108 bits (269), Expect = 1e-24, Method: Composition-based stats. Identities = 44/154 (28%), Positives = 67/154 (43%), Gaps = 39/154 (25%) Query: 14 EWPEYFMAVAFLSAQRSK---DPNSQVGACIVNSENKIVGIGYNGMPNGCSDDVLPWRRT 70 EY+M +A A++ + + N VGA +V + +IVG+G + Sbjct: 12 SMEEYYMKLALDLAKQGEGQTESNPLVGAVVVK-DGQIVGMGAH---------------- 54 Query: 71 AENKLDTKYPYVCHAELNAIMNKNSTDVKGCSMYVALFPCNE------CAKLIIQAGIKE 124 KY HAE++AI + +G +YV L PC+ CA+LII +GIK Sbjct: 55 ------LKYGE-AHAEVHAI-HMAGAHAEGADIYVTLEPCSHYGKTPPCAELIINSGIKR 106 Query: 125 VIFMSDKYHDSDEATAARLLFNM--AGVTFRKFI 156 V D + A R + M AG+ R+ I Sbjct: 107 VFV---AMRDPNPLVAGRGISMMKEAGIEVREGI 137 >1WWR-A nrPDB Length = 171 Score = 99.2 bits (245), Expect = 8e-22, Method: Composition-based stats. Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 35/163 (21%) Query: 16 PEYFMAVAFLSAQRSKDPNS-QVGACIVNSENKIVGIGYNGMPNGCSDDVLPWRRTAENK 74 EYF+ VA A+R+ + VGA IV E +I+ +N + Sbjct: 23 KEYFLKVALREAKRAFEKGEVPVGAIIVK-EGEIISKAHNSV------------------ 63 Query: 75 LDTKYPYVCHAELNAIMNK----NSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSD 130 + K P HAE+ AI N+ ++GC +YV L PC C+ ++ + I++VIF + Sbjct: 64 EELKDP-TAHAEMLAIKEACRRLNTKYLEGCELYVTLEPCIMCSYALVLSRIEKVIFSAL 122 Query: 131 KYHDSDEATAARL--LFNMAGVTFRKF-----IPKCSKIVIDF 166 D + + + + R + + S+++ +F Sbjct: 123 ---DKKHGGVVSVFNILDEPTLNHRVKWEYYPLEEASELLSEF 162 >2HXV-A nrPDB Length = 360 Score = 93.0 bits (229), Expect = 6e-20, Method: Composition-based stats. Identities = 39/165 (23%), Positives = 63/165 (38%), Gaps = 44/165 (26%) Query: 17 EYFMAVAFLSAQRSK---DPNSQVGACIVNSENKIVGIGYNGMPNGCSDDVLPWRRTAEN 73 E FM A A++ +PN VGA +V + +I+ G++ Sbjct: 15 ETFMKRAIELAKKGLGRVNPNPPVGAVVVK-DGRIIAEGFH------------------- 54 Query: 74 KLDTKYPYVC--HAELNAI--MNKNSTDVKGCSMYVALFPCNE------CAKLIIQAGIK 123 PY HAE AI K D++G ++ V L PC+ C LII++GIK Sbjct: 55 ------PYFGGPHAERMAIESARKKGEDLRGATLIVTLEPCDHHGKTPPCTDLIIESGIK 108 Query: 124 EVIFMSDKYHDSDEATAARL--LFNMAGVTFRKFIPKCSKIVIDF 166 V+ D + + + N + + K + +F Sbjct: 109 TVVIG---TRDPNPVSGNGVEKFRNHGIEVIEGVLEEEVKKLCEF 150 >2G6V-A nrPDB Length = 402 Score = 84.5 bits (207), Expect = 2e-17, Method: Composition-based stats. Identities = 43/151 (28%), Positives = 59/151 (39%), Gaps = 39/151 (25%) Query: 17 EYFMAVAFLSAQRS---KDPNSQVGACIVNSENKIVGIGYNGMPNGCSDDVLPWRRTAEN 73 EY+MA A AQR PN VG IV + +IVG GY+ +R E Sbjct: 31 EYYMARALKLAQRGRFTTHPNPNVGCVIVK-DGEIVGEGYH-------------QRAGEP 76 Query: 74 KLDTKYPYVCHAELNAIMNKNSTDVKGCSMYVALFPCNE------CAKLIIQAGIKEVIF 127 HAE++A+ KG + YV L PC+ C +I AG+ V+ Sbjct: 77 ----------HAEVHAL-RMAGEKAKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVV- 124 Query: 128 MSDKYHDSDEATAARLL--FNMAGVTFRKFI 156 D + A R L AG+ + Sbjct: 125 --ASMQDPNPQVAGRGLYRLQQAGIDVSHGL 153 >2B3J-A nrPDB Length = 159 Score = 78.4 bits (191), Expect = 1e-15, Method: Composition-based stats. Identities = 36/162 (22%), Positives = 62/162 (38%), Gaps = 36/162 (22%) Query: 18 YFMAVAFLSAQRSKDPNS-QVGACIVNSENKIVGIGYNGMPNGCSDDVLPWRRTAENKLD 76 YFM +A A+++ +GA I + +++ +N + Sbjct: 9 YFMTLAIEEAKKAAQLGEVPIGAIITKDD-EVIARAHN-------------------LRE 48 Query: 77 TKYPYVCHAELNAIMNKN----STDVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKY 132 T HAE AI S ++GC++YV L PC CA I+ + I V++ +D Sbjct: 49 TLQQPTAHAEHIAIERAAKVLGSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGAD-- 106 Query: 133 HDSDEATAARLL--FNMAGVTFRKFIPK------CSKIVIDF 166 D + L+ + R + K CS ++ F Sbjct: 107 -DPKGGCSGSLMNLLQQSNFNHRAIVDKGVLKEACSTLLTTF 147 >2NX8-A nrPDB Length = 179 Score = 74.1 bits (180), Expect = 3e-14, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 59/164 (35%), Gaps = 31/164 (18%) Query: 13 LEWPEYFMAVAFLSAQRSKDPNS-QVGACIVNSENKIVGIGYNGMPNGCSDDVLPWRRTA 71 LE YFM A +++S +G IV + +I+G G+N Sbjct: 13 LEEQTYFMQEALKESEKSLQKAEIPIGCVIVK-DGEIIGRGHNAREES------------ 59 Query: 72 ENKLDTKYPYVCHAELNAIMNKN----STDVKGCSMYVALFPCNECAKLIIQAGIKEVIF 127 + HAE+ AI N + + +++V + PC C+ I A I VI+ Sbjct: 60 -------NQAIMHAEMMAINEANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIY 112 Query: 128 MSDKYHDSDEATAARL--LFNMAGVTFRKFIPKCSKIVIDFDSI 169 + + L + + R + + + D +I Sbjct: 113 GAS---NQKFGGVDSLYQILTDERLNHRVQV-ERGLLAADCANI 152 >2A8N-A nrPDB Length = 144 Score = 65.6 bits (158), Expect = 1e-11, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 47/133 (35%), Gaps = 28/133 (21%) Query: 18 YFMAVAFLSAQRSKDPNS-QVGACIVNSENKIVGIGYNGMPNGCSDDVLPWRRTAENKLD 76 +FM +A + A+ + + + +GA +V + +++ + N+ Sbjct: 6 HFMELALVEARSAGERDEVPIGAVLV-LDGRVIA-------------------RSGNRTR 45 Query: 77 TKYPYVCHAEL----NAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKY 132 HAE+ A + G +YV L PC CA I A I+ + + + Sbjct: 46 ELNDVTAHAEIAVIRMACEALGQERLPGADLYVTLEPCTMCAAAISFARIRRLYYGAQ-- 103 Query: 133 HDSDEATAARLLF 145 D + Sbjct: 104 -DPKGGAVESGVR 115 >3ZPC-A nrPDB Length = 382 Score = 65.6 bits (158), Expect = 1e-11, Method: Composition-based stats. Identities = 35/164 (21%), Positives = 64/164 (39%), Gaps = 39/164 (23%) Query: 13 LEWPEYFMAVAFLSAQR---SKDPNSQVGACIVNSENKIVGIGYNGMPNGCSDDVLPWRR 69 L+ +Y+M A A+R S PN VG IV + +++G G++ Sbjct: 25 LKQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDD-QLIGEGFHPKAGQP--------- 74 Query: 70 TAENKLDTKYPYVCHAELNAIMNKNSTDVKGCSMYVALFPCNE------CAKLIIQAGIK 123 HAE+ A+ + +G + YV L PC CA+ +++A +K Sbjct: 75 --------------HAEVFAL-RQAGEQAQGATAYVTLEPCAHYGRTPPCAEALVKAQVK 119 Query: 124 EVIFMSDKYHDSDEATAARL--LFNMAGVTFRKFIPKCSKIVID 165 +V+ D + A + + AG+ I + ++ Sbjct: 120 KVVVACP---DPNPLVAGKGVQILKNAGIEVEIGICEDLAAKLN 160 >1TIY-A nrPDB Length = 164 Score = 61.0 bits (146), Expect = 3e-10, Method: Composition-based stats. Identities = 29/132 (21%), Positives = 43/132 (32%), Gaps = 27/132 (20%) Query: 17 EYFMAVAFLSAQRSKDPN--SQVGACIVNSENKIVGIGYNGMPNGCSDDVLPWRRTAENK 74 E F+ A A + GA IV + I+ G N + Sbjct: 4 ETFLKRAVTLACEGVNAGIGGPFGAVIVK-DGAIIAEGQNNVT----------------- 45 Query: 75 LDTKYPYVCHAELNAIMNK----NSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSD 130 T HAE+ AI + + C +Y + PC C I A K V + ++ Sbjct: 46 --TSNDPTAHAEVTAIRKACKVLGAYQLDDCILYTSCEPCPMCLGAIYWARPKAVFYAAE 103 Query: 131 KYHDSDEATAAR 142 D+ EA Sbjct: 104 HT-DAAEAGFDD 114 >1RB7-A nrPDB Length = 161 Score = 59.1 bits (141), Expect = 9e-10, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 59/165 (35%), Gaps = 29/165 (17%) Query: 14 EWPEYFMAVAFLSAQRS-KDPNSQVGACIVNS-ENKIVGIGYNGMPNGCSDDVLPWRRTA 71 +W + M +A+ A K+ +G C++N+ + ++G G+N Sbjct: 12 KWDQKGMDIAYEEAALGYKEGGVPIGGCLINNKDGSVLGRGHN----------------- 54 Query: 72 ENKLDTKYPYVCHAELNAIMN---KNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIFM 128 K H E++ + N K ++Y L PC+ C II GI + Sbjct: 55 --MRFQKGSATLHGEISTLENCGRLEGKVYKDTTLYTTLSPCDMCTGAIIMYGIPRCVVG 112 Query: 129 SDKYHDSDEATAARLLFNMAGVTFRKFIPKCSKIVIDFDSINSRP 173 + S + L +C KI+ F I+ RP Sbjct: 113 ENVNFKSK---GEKYLQTRGHEVVVVDDERCKKIMKQF--IDERP 152 >5JFY-A nrPDB Length = 139 Score = 55.6 bits (132), Expect = 1e-08, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 42/119 (35%), Gaps = 26/119 (21%) Query: 19 FMAVAFLSAQRSKDPNS--QVGACIVNSENKIVGIGYNGMPNGCSDDVLPWRRTAENKLD 76 F+ A A + D GA IV+ N + C + VL + Sbjct: 19 FLTQAVEEAYKGVDCGDGGPFGAVIVHK---------NEVVASCHNMVLKYTDP------ 63 Query: 77 TKYPYVCHAELNAIMNK----NSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDK 131 HAE+ AI N ++ C +Y + PC C I + +K +++ + Sbjct: 64 -----TAHAEVTAIREACKKLNQIELSECEIYASCEPCPMCFGAIHLSRLKRLVYGAKA 117 >3DH1-A nrPDB Length = 189 Score = 48.3 bits (113), Expect = 2e-06, Method: Composition-based stats. Identities = 27/132 (20%), Positives = 46/132 (34%), Gaps = 31/132 (23%) Query: 13 LEWPEYFMAVAFLSAQRSKDPNS-QVGACIVNSENKIVGIGYNGMPNGCSDDVLPWRRTA 71 +E E +M A A+ + + VG +V + N++VG G N Sbjct: 23 MEETEKWMEEAMHMAKEALENTEVPVGCLMVYN-NEVVGKGRN----------------- 64 Query: 72 ENKLDTKYPYVCHAELNAIMN----------KNSTDVKGCSMYVALFPCNECAKLIIQAG 121 +++ HAE+ AI S + +YV + PC CA + Sbjct: 65 --EVNQTKNATRHAEMVAIDQVLDWCRQSGKSPSEVFEHTVLYVTVEPCIMCAAALRLMK 122 Query: 122 IKEVIFMSDKYH 133 I V++ Sbjct: 123 IPLVVYGCQNER 134 >4LD2-A nrPDB Length = 197 Score = 44.1 bits (102), Expect = 3e-05, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 49/167 (29%), Gaps = 35/167 (20%) Query: 13 LEWPEYFMAVAFLS--AQRSKDPNSQVGACIVNSENKIVGIGYNGMPNGCSDDVLPWRRT 70 L PE M A + D A ++ G N + G Sbjct: 25 LAAPEARMGYVLELVRANIAADGGPFAAAVFERDSGLLIAAGTNRVVPGRCS-------- 76 Query: 71 AENKLDTKYPYVCHAELNAIMNKNST------DVKG---CSMYVALFPCNECAKLIIQAG 121 HAE+ A+ + G C + + PC C +I +G Sbjct: 77 -----------AAHAEILALSLAQAKLDTHDLSADGLPACELVTSAEPCVMCFGAVIWSG 125 Query: 122 IKEVIFMSDKYHDSDEATAARLLFN---MAGVTFRKFIPKCSKIVID 165 ++ ++ + + D + M G+ R I + ++ D Sbjct: 126 VRSLV-CAARSDDVEAIGFDEGPRPENWMGGLEAR-GITVTTGLLRD 170 >3G8Q-A nrPDB Length = 278 Score = 37.9 bits (86), Expect = 0.002, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 3/44 (6%) Query: 84 HAELNAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIF 127 HAE + DV+G ++V PC CA+ + +AG+ V++ Sbjct: 44 HAERKLVRR---HDVEGKVVFVTARPCLYCARELAEAGVAGVVY 84 >3L5A-A nrPDB Length = 419 Score = 32.9 bits (73), Expect = 0.073, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 44/126 (34%), Gaps = 11/126 (8%) Query: 16 PEYFMAVAFLS--AQRSKDPNSQV-GACIVNSENKIVGIGYNGMPNGCSDDVLPWRRTAE 72 E ++ A L+ A+RS QV GA + K+ G+N + C + T + Sbjct: 55 KEGYITKADLAYAARRSNSAGMQVTGAAYIEPYGKLFEYGFNIDHDACIPGLTNMASTMK 114 Query: 73 NKLDTKYPYVCHAEL---NAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIFMS 129 + HA AI+ N V G S P + I +I Sbjct: 115 QHGSLAIIQLAHAGRFSNQAIL--NFGKVYGPSPMTLHSPIEHVVIAMSHEKINSII--- 169 Query: 130 DKYHDS 135 +Y D+ Sbjct: 170 QQYRDA 175 >1ZCZ-A nrPDB Length = 464 Score = 32.1 bits (71), Expect = 0.13, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 55/151 (36%), Gaps = 9/151 (5%) Query: 8 KRDDYLEWPEYFMAVAFLSAQRSKDPNSQ---VGACIVNSENKIVGIGYNGMPNGCSDDV 64 K DY W + + ++R + VG + E + + Y + S+ V Sbjct: 311 KPGDYASWAGKMAFGSLVLSERKYPEGNFELVVGEPLSEKELEDLEFAYRVVEGAKSNAV 370 Query: 65 LPWRRTAENKLDTKYPYVCHAELNAIMNKNSTDVKGCSMYV-ALFPCNECAKLIIQAGIK 123 L + + + P A A + KG A FP + +++ QAG+K Sbjct: 371 LIAKDGVTVGIGSGQPSRKRAAWIATV-MAGEKAKGAVAASDAFFPFPDSLEILAQAGVK 429 Query: 124 EVIFMSDKYHDSDEATAARLLFNMAGVTFRK 154 V+ D + AR L G+TF K Sbjct: 430 AVVAPLGSIRDEEVIEKAREL----GITFYK 456 >5W3V-B nrPDB Length = 215 Score = 31.4 bits (69), Expect = 0.21, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 24/80 (30%), Gaps = 5/80 (6%) Query: 44 SENKIVGIGYNGMPNGCSDDVLPWRRTAENKLDTKYPYVCHAELNAIMNKNSTDVKGC-- 101 + + V Y + P + + HAE+ I S + Sbjct: 16 NNKRRVNKPYYPRKALLCYQLTPQNGSTPTRGHLINKKEDHAEIRFINEIKSMGLDETQC 75 Query: 102 ---SMYVALFPCNECAKLII 118 + Y+ PC CA ++ Sbjct: 76 YQVTCYLTWSPCPSCAGELV 95 >1JRA-A nrPDB Length = 117 Score = 29.4 bits (64), Expect = 0.80, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 29/65 (44%), Gaps = 3/65 (4%) Query: 103 MYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSDEATAARLLFNMAGVTFRKFIPKCSKI 162 +Y L+PC EC+ ++ I++ + + A + N +K I C+ I Sbjct: 44 LYAELYPCGECSYHFVKL-IEK--YPVQTSSRTAAAMWGCHIHNKVNEYLKKDIYDCATI 100 Query: 163 VIDFD 167 + D+D Sbjct: 101 LEDYD 105 >4EG2-A nrPDB Length = 298 Score = 28.7 bits (62), Expect = 1.5, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 15/39 (38%), Gaps = 1/39 (2%) Query: 80 PYVCHAELNAIMNKNSTDVKG-CSMYVALFPCNECAKLI 117 HAE AI + KG + + PC C + + Sbjct: 101 GQTVHAEQCAISHAWMKGEKGVADITINFSPCGHCRQFM 139 >4FGM-A nrPDB Length = 597 Score = 28.3 bits (61), Expect = 1.8, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 1/62 (1%) Query: 28 QRSKDPNSQVGACIVNSENKIVGIGYNGMPNGCSDDVLPWRRTAENKLDTKYPYVCHAEL 87 Q PN G+ ++ +K + IG + NG S V + +K+P H ++ Sbjct: 29 QELWLPNWIPGSYLIRDFSKHI-IGLHAESNGLSLPVKQISKNRWQLARSKHPVTVHYQV 87 Query: 88 NA 89 A Sbjct: 88 YA 89 >3VM8-A nrPDB Length = 190 Score = 28.3 bits (61), Expect = 1.8, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 34/98 (34%), Gaps = 15/98 (15%) Query: 83 CHAEL-------NAIMNKNSTDVKGCSMYVALFPCNECAKLII-----QAGIKEVIFMSD 130 CHAE + I++ N+ + Y + PC +CA + + + IF + Sbjct: 65 CHAERCFLSWFCDDILSPNTKY--QVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIFTAR 122 Query: 131 KYHDSDEATAARLLFNMAGVTFRKFIPKCSKIVIDFDS 168 Y+ L +++ I +++ Sbjct: 123 LYY-FQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWEN 159 >3DMO-A nrPDB Length = 138 Score = 27.5 bits (59), Expect = 3.3, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 41/113 (36%), Gaps = 12/113 (10%) Query: 33 PNSQVGACIVNSENKIVGIGYNGMPNGCSDDVLPWRRTAENKLDTKYPYVCHAELNAIMN 92 N +VGA +V ++ K+ G N R + L Y A + + Sbjct: 30 SNFKVGAALVTNDGKVF-HGCNVENASYGLCNCAERTALFSALAAGYRPGEFAAIAVVGE 88 Query: 93 KNSTDVKGCSMYVALFPCNECAKLIIQAGIKEV-IFMSDKYHDSDEATAARLL 144 + + PC C +++I+ G + + +++ D +A LL Sbjct: 89 THG----------PIAPCGACRQVMIELGKPTLEVVLTNMQGDVRVTSAGDLL 131 >5Z98-A nrPDB Length = 185 Score = 27.1 bits (58), Expect = 3.7, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 23/63 (36%), Gaps = 5/63 (7%) Query: 61 SDDVLPWRRTAENKLDTKYPYVCHAELNAIMNKNSTDVKGC-----SMYVALFPCNECAK 115 + P + + + CHAE+ I S + + Y+ PC+ CA Sbjct: 33 CYQLTPQNGSTPTRGYFENKKKCHAEICFINEIKSMGLDETQCYQVTCYLTWSPCSSCAW 92 Query: 116 LII 118 ++ Sbjct: 93 KLV 95 >2FR6-A nrPDB Length = 146 Score = 27.1 bits (58), Expect = 3.9, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 35/104 (33%), Gaps = 14/104 (13%) Query: 28 QRSKDP--NSQVGACIVNSENKIVGIGYNGMPNGCSDDVLPWRRTAENKLDTKYPYVCHA 85 + + P VGA ++ + +I + P AE K + Sbjct: 27 KSAYCPYSRFPVGAALLTGDGRIFS------GCNIENACYPLGVCAERTAIQKAISEGYK 80 Query: 86 ELNAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIFMS 129 + AI + + + PC C +++ + G ++M+ Sbjct: 81 DFRAIAISSDLQEE------FISPCGACRQVMREFGTDWAVYMT 118 >1UB2-A nrPDB Length = 720 Score = 26.0 bits (55), Expect = 8.8, Method: Composition-based stats. Identities = 9/56 (16%), Positives = 17/56 (30%), Gaps = 2/56 (3%) Query: 119 QAGIKE--VIFMSDKYHDSDEATAARLLFNMAGVTFRKFIPKCSKIVIDFDSINSR 172 Q+GI V + F + + + + K ++ IN R Sbjct: 297 QSGIGRNAVTSGLEGAWTPHPTQWDNGYFAVCSLNYDWELKKNPAGAWQWEPINPR 352 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.311 0.119 0.307 Lambda K H 0.267 0.0363 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,777,473 Number of Sequences: 36641 Number of extensions: 184892 Number of successful extensions: 491 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 31 Number of HSP's successfully gapped in prelim test: 21 Number of HSP's that attempted gapping in prelim test: 417 Number of HSP's gapped (non-prelim): 55 length of query: 178 length of database: 10,336,785 effective HSP length: 91 effective length of query: 87 effective length of database: 7,002,454 effective search space: 609213498 effective search space used: 609213498 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 55 (26.0 bits)