BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= P32318
(326 letters)
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
36,641 sequences; 10,336,785 total letters
Searching..................................................done
Results from round 1
Score E
Sequences producing significant alignments: (bits) Value
3FPZ-A nrPDB 674 0.0
3JSK-A nrPDB 352 1e-97
1RP0-A nrPDB 296 7e-81
4Y4M-A nrPDB 62 4e-10
4Y4N-A nrPDB 57 2e-08
2GMH-A nrPDB 39 0.002
1FOH-A nrPDB 37 0.010
1F8S-A nrPDB 37 0.013
4C5O-A nrPDB 37 0.014
3RHA-A nrPDB 36 0.026
3LOV-A nrPDB 35 0.031
2GAG-B nrPDB 35 0.032
3KVE-A nrPDB 35 0.034
2DKH-A nrPDB 34 0.071
1NST-A nrPDB 33 0.19
1REO-A nrPDB 33 0.21
1ZOV-A nrPDB 32 0.29
2JB2-A nrPDB 32 0.39
4USR-A nrPDB 32 0.51
2CVJ-A nrPDB 32 0.52
5MJK-A nrPDB 31 0.60
3BHF-A nrPDB 31 0.92
2Q7V-A nrPDB 30 0.96
6A37-A nrPDB 30 1.1
4IVM-B nrPDB 30 1.2
2HFB-A nrPDB 30 1.5
4YNU-A nrPDB 30 1.5
2VVL-G nrPDB 30 2.1
3ATQ-A nrPDB 29 2.5
4AF2-A nrPDB 29 2.6
3HVS-A nrPDB 29 2.6
5K1S-A nrPDB 29 2.9
3CGD-A nrPDB 29 2.9
3NIX-A nrPDB 29 3.2
1QO8-A nrPDB 29 3.2
3FCE-A nrPDB 29 3.3
1GAL-A nrPDB 29 3.4
3X0V-A nrPDB 28 3.6
5UTH-A nrPDB 28 4.1
6CGR-k nrPDB 28 4.2
1GPE-A nrPDB 28 4.3
4Z44-A nrPDB 28 4.4
4HA6-A nrPDB 28 4.6
3K30-A nrPDB 28 4.8
3Q9T-A nrPDB 28 4.9
6H3Z-A nrPDB 28 5.2
6H3G-A nrPDB 28 5.2
5VJ7-A nrPDB 28 5.7
3I6D-A nrPDB 28 6.0
1O5W-A nrPDB 28 6.9
3IHG-A nrPDB 28 7.3
3KYB-A nrPDB 28 7.7
5W4C-A nrPDB 27 8.2
3LAD-A nrPDB 27 8.5
4CBQ-A nrPDB 27 9.6
6B82-A nrPDB 27 9.9
>3FPZ-A nrPDB
Length = 326
Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/326 (99%), Positives = 325/326 (99%)
Query: 1 MSATSTATSTSASQLHLNSTPVTHCLSDIVKKEDWSDFKFAPIRESTVSRAMTSRYFKDL 60
MSATSTATSTSASQLHLNSTPVTHCLSDIVKKEDWSDFKFAPIRESTVSRAMTSRYFKDL
Sbjct: 1 MSATSTATSTSASQLHLNSTPVTHCLSDIVKKEDWSDFKFAPIRESTVSRAMTSRYFKDL 60
Query: 61 DKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRK 120
DKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRK
Sbjct: 61 DKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRK 120
Query: 121 PAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTE 180
PAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTE
Sbjct: 121 PAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTE 180
Query: 181 KGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGP 240
KGEVTVAGVVTNWTLVTQAHGTQC MDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGP
Sbjct: 181 KGEVTVAGVVTNWTLVTQAHGTQCSMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGP 240
Query: 241 FGAFCAKRIVDIDQNQKLGGMKGLDMNHAEHDVVIHSGAYAGVDNMYFAGMEVAELDGLN 300
FGAFCAKRIVDIDQNQKLGGMKGLDMNHAEHDVVIHSGAYAGVDNMYFAGMEVAELDGLN
Sbjct: 241 FGAFCAKRIVDIDQNQKLGGMKGLDMNHAEHDVVIHSGAYAGVDNMYFAGMEVAELDGLN 300
Query: 301 RMGPTFGAMALSGVHAAEQILKHFAA 326
RMGPTFGAMALSGVHAAEQILKHFAA
Sbjct: 301 RMGPTFGAMALSGVHAAEQILKHFAA 326
>3JSK-A nrPDB
Length = 344
Score = 352 bits (903), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 178/300 (59%), Positives = 214/300 (71%), Gaps = 30/300 (10%)
Query: 38 FKFAPIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIE 97
F F+PIRESTVSRAMT RYF DLD A +D++IVGAGS GLSAAYV++ RPDL++ I+E
Sbjct: 52 FTFSPIRESTVSRAMTRRYFADLDAHAETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVE 111
Query: 98 SSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSKVL 157
+ VAPGGG+WLGGQLFSAMVMRKPA +FL E+ +PYEDEGDYVVVKHAALF STVLSKVL
Sbjct: 112 AGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDYVVVKHAALFTSTVLSKVL 171
Query: 158 QLPNVKLFNATCVEDLVTRP-------------PTEKGEVTVAGVVTNWTLVTQAHGTQC 204
Q PNVKLFNAT VEDL+TR ++ +V +AGVVTNWTLV+ H Q
Sbjct: 172 QRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQS 231
Query: 205 CMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCAKRIVDIDQNQKLGGMKGL 264
MDPN I VI+STTGHDGPFGAF KR+V + Q ++L GM+GL
Sbjct: 232 SMDPNTINAP---------------VIISTTGHDGPFGAFSVKRLVSMKQMERLNGMRGL 276
Query: 265 DMNHAEHDVVIHSGAYAGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHF 324
DM AE +V ++ V + GME++E+DG NRMGPTFGAMALSGV AA + ++ F
Sbjct: 277 DMQSAEDAIVNNTREI--VPGLIVGGMELSEIDGANRMGPTFGAMALSGVKAAHEAIRVF 334
>1RP0-A nrPDB
Length = 284
Score = 296 bits (758), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 157/289 (54%), Positives = 194/289 (67%), Gaps = 24/289 (8%)
Query: 34 DWSDFKFAPIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKV 93
D + F F PI+ES VSR MT RY D+ +A +DV++VGAGS+GLSAAY I+KN P+++V
Sbjct: 8 DLNAFTFDPIKESIVSREMTRRYMTDMITYAETDVVVVGAGSAGLSAAYEISKN-PNVQV 66
Query: 94 CIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHAALFISTVL 153
IIE SV+PGGG+WLGGQLFSAM++RKPAHLFL E+ + Y+++ YVVVKHAALF ST++
Sbjct: 67 AIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAALFTSTIM 126
Query: 154 SKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIEL 213
SK+L PNVKLFNA EDL+ KG V GVVTNW LV Q H TQ CMDPNV+E
Sbjct: 127 SKLLARPNVKLFNAVAAEDLIV-----KGN-RVGGVVTNWALVAQNHHTQSCMDPNVMEA 180
Query: 214 AGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCAKRIVDIDQNQKLGGMKGLDMNHAEHDV 273
+++S+ GHDGPFGA KR+ I + GMK LDMN AE +
Sbjct: 181 K---------------IVVSSCGHDGPFGATGVKRLKSIGMIDHVPGMKALDMNTAEDAI 225
Query: 274 VIHSGAYAGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILK 322
V + V M GMEVAE+DG RMGPTFGAM +SG A + LK
Sbjct: 226 VRLTREV--VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALK 272
>4Y4M-A nrPDB
Length = 290
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 120/276 (43%), Gaps = 32/276 (11%)
Query: 45 ESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104
E+ ++A+ F +DV+IVGAG SGL+ A +AK KV ++E +A GG
Sbjct: 39 ETKTTKAILKASFDMWLDIVEADVVIVGAGPSGLTCARYLAKE--GFKVVVLERHLAFGG 96
Query: 105 GSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSKVLQLPNVKL 164
G+W GG F +V+ +PA L+E+ I D GD V ++ + L+ K+
Sbjct: 97 GTWGGGMGFPYIVVEEPADELLREVGIKLIDMGDGYYVAD-SVEVPAKLAVAAMDAGAKI 155
Query: 165 FNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDL 224
VEDL+ R E VAGVV N + +A +DP L
Sbjct: 156 LTGIVVEDLILR------EDGVAGVVINSYAIERA---GLHIDP---------------L 191
Query: 225 SQKHGVILSTTGHDGPFGAFCAKRIVDIDQNQKLGGMKGLDMNHAEHDVVIHSGAYAGVD 284
+ + V++ TGH+ K+ + G K + E+ ++ ++
Sbjct: 192 TIRSKVVVDATGHEASIVNILVKK---NKLEADVPGEKSMWAEKGENALLRNTREV--YP 246
Query: 285 NMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQI 320
N++ GM G RMG FG M LSG AE I
Sbjct: 247 NLFVCGMAANASHGGYRMGAIFGGMYLSGKLCAELI 282
>4Y4N-A nrPDB
Length = 286
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 126/286 (44%), Gaps = 41/286 (14%)
Query: 45 ESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104
E +RA+ F DV IVG G SGL+AA IAK KV ++E +A GG
Sbjct: 32 EYATTRAILKSAFDMWLDIIDVDVAIVGGGPSGLTAARYIAKE--GYKVVVLERHLAFGG 89
Query: 105 GSWLGGQLFSAMVMRKPAHLFLQELEIPYED-EGDYVVVKHAALFISTVLSKVLQLPNVK 163
G+W GG F +V+ +PA L+E+ + E EG+ + ++ + L+ K
Sbjct: 90 GTWGGGMGFPYIVVEEPADEILREVGVKLEKVEGEDGLYTADSVEVPAKLAVGAIDAGAK 149
Query: 164 LFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRD 223
+ VEDLV R E VAGVV N + +A +DP I
Sbjct: 150 VLTGIVVEDLVLR------ENRVAGVVINSYAIEKA---GLHIDPITI------------ 188
Query: 224 LSQKHGVILSTTGHDGPFGAFCAKRIVDIDQNQKLG----GMKGLDMNHAEHDVVIHSG- 278
+ K+ ++ TGHD +++ N +LG G K + E+ ++ ++
Sbjct: 189 -TAKY--VVDATGHDASVVTTLSRK------NPELGLEVPGEKSMWAEKGENALLRNTRE 239
Query: 279 AYAGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHF 324
Y G ++ GM + +RMG FG M +SG AE I++
Sbjct: 240 VYPG---LFVCGMAANAVYAGHRMGAIFGGMYISGKKCAEMIVEKL 282
>2GMH-A nrPDB
Length = 584
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 34/46 (73%), Gaps = 5/46 (10%)
Query: 59 DLDKFAV-SDVIIVGAGSSGLSAA----YVIAKNRPDLKVCIIESS 99
++++FA +DV+IVGAG +GLSAA + A++ DL+VC++E +
Sbjct: 28 NMERFAEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKA 73
>1FOH-A nrPDB
Length = 664
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 26/34 (76%), Gaps = 3/34 (8%)
Query: 67 DVIIVGAGSSGLSAAYVIA---KNRPDLKVCIIE 97
DV+IVGAG +GL AA V++ + +PDLKV II+
Sbjct: 9 DVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIID 42
>1F8S-A nrPDB
Length = 498
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 27/37 (72%), Gaps = 2/37 (5%)
Query: 68 VIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104
V+IVGAG +GLSAAYV+A +V ++E+S PGG
Sbjct: 36 VVIVGAGMAGLSAAYVLAG--AGHQVTVLEASERPGG 70
>4C5O-A nrPDB
Length = 357
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGG---SWLGGQLFS 114
DV+++G G SGLSA Y + R L I+++ +PGG +W LFS
Sbjct: 5 DVVVIGGGQSGLSAGYFL--RRSGLSYVILDAEASPGGAWQHAWHSLHLFS 53
>3RHA-A nrPDB
Length = 482
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 22/83 (26%)
Query: 57 FKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW--------- 107
++LD+ DV+IVGAG SGL+AA + K L V ++E+ GG +W
Sbjct: 3 MQNLDR----DVVIVGAGPSGLTAARELKK--AGLSVAVLEARDRVGGRTWTDTIDGAML 56
Query: 108 -LGGQLFSAMVMRKPAHLFLQEL 129
+GGQ S P L EL
Sbjct: 57 EIGGQWVS------PDQTVLMEL 73
>3LOV-A nrPDB
Length = 475
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 6/45 (13%)
Query: 68 VIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQL 112
++IVG G +GL+AAY + PDL + ++E+ G LGG++
Sbjct: 7 LVIVGGGITGLAAAYYAERAFPDLNITLLEA------GERLGGKV 45
>2GAG-B nrPDB
Length = 405
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 11/100 (11%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLF--------SAMVM 118
D IIVG G GL+ AY +AKN V ++E GG + SA +
Sbjct: 23 DAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGWLAGGNMARNTTIIRSNYLWDESAGIY 82
Query: 119 RKPAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSKVLQ 158
K L+ Q +P + E D++ + L ++ L V +
Sbjct: 83 EKSLKLWEQ---LPEDLEYDFLFSQRGVLNLAHTLGDVRE 119
>3KVE-A nrPDB
Length = 486
Score = 35.4 bits (80), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
Query: 68 VIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104
V++VGAG SGLSAAYV+A KV ++E+S GG
Sbjct: 36 VVVVGAGMSGLSAAYVLAG--AGHKVTVLEASERAGG 70
>2DKH-A nrPDB
Length = 639
Score = 34.3 bits (77), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102
DV+IVG G +GL+ A +A PD++ CI+E P
Sbjct: 34 DVLIVGCGPAGLTLAAQLAAF-PDIRTCIVEQKEGP 68
>1NST-A nrPDB
Length = 325
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 8/95 (8%)
Query: 58 KDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMV 117
K D+F ++I+G +G +A Y+ PDL SS P ++ Q F+
Sbjct: 42 KTCDRFP--KLLIIGPQKTGTTALYLFLGMHPDL------SSNYPSSETFEEIQFFNGHN 93
Query: 118 MRKPAHLFLQELEIPYEDEGDYVVVKHAALFISTV 152
K +++ IP D+ K A F S V
Sbjct: 94 YHKGIDWYMEFFPIPSNTTSDFYFEKSANYFDSEV 128
>1REO-A nrPDB
Length = 486
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
Query: 68 VIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104
V++VGAG SGLSAAYV++ +V ++E+S GG
Sbjct: 36 VVVVGAGMSGLSAAYVLSG--AGHQVTVLEASERAGG 70
>1ZOV-A nrPDB
Length = 386
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102
DVI+VGAGS G++A Y +AK +K +++S P
Sbjct: 5 DVIVVGAGSMGMAAGYYLAKQ--GVKTLLVDSFDPP 38
>2JB2-A nrPDB
Length = 489
Score = 32.0 bits (71), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 68 VIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW 107
V+++G G +GL +A+ + K KV ++E+ PGG W
Sbjct: 14 VVVLGGGPAGLCSAFELQK--AGYKVTVLEARTRPGGRVW 51
>4USR-A nrPDB
Length = 361
Score = 31.6 bits (70), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGG---SWLGGQLFS 114
+ DVI++G G + L+ AY + R L +++ PGG +W +LFS
Sbjct: 7 ILDVIVIGGGQAALTTAYFL--RRTSLSYLLLDEQPGPGGAWLHAWDSLRLFS 57
>2CVJ-A nrPDB
Length = 180
Score = 31.6 bits (70), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESS 99
DVI+VG G SGLSAA +A R LKV +++
Sbjct: 3 DVIVVGGGPSGLSAALFLA--RAGLKVLVLDGG 33
>5MJK-A nrPDB
Length = 327
Score = 31.2 bits (69), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 26/38 (68%), Gaps = 3/38 (7%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104
DV+I+G+G +G++AA A R ++K ++E V PGG
Sbjct: 26 DVVIIGSGPAGMTAAMYTA--RSEMKTLLLERGV-PGG 60
>3BHF-A nrPDB
Length = 390
Score = 30.8 bits (68), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 17/21 (80%)
Query: 67 DVIIVGAGSSGLSAAYVIAKN 87
DVI+VGAGS G++A Y +AK
Sbjct: 6 DVIVVGAGSMGMAAGYQLAKQ 26
>2Q7V-A nrPDB
Length = 325
Score = 30.4 bits (67), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW 107
DV+I+G G +GL+AA I R L I+E + G +W
Sbjct: 10 DVVIIGGGPAGLTAA--IYTGRAQLSTLILEKGMPGGQIAW 48
>6A37-A nrPDB
Length = 552
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 15/75 (20%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPD--LKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHL 124
D II+GAG GL Y + K R D LKV + + GG+W Q + + HL
Sbjct: 28 DAIIIGAGFGGL---YSLKKLRDDFNLKVRAFDRATEV-GGTWFWNQ-YPGALSDSETHL 82
Query: 125 F--------LQELEI 131
+ LQE+EI
Sbjct: 83 YCYSWDKELLQEMEI 97
>4IVM-B nrPDB
Length = 483
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 68 VIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWL 108
V+++G G SGL+A+Y +++ KV ++ESS GG W+
Sbjct: 11 VVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGG--WI 49
>2HFB-A nrPDB
Length = 409
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Query: 3 ATSTATSTSASQLHLNSTPVTHCLSDIVKKEDWSDFKFAPIRESTVSRAMTSRYFKDLDK 62
AT+T A+Q S P LSD + K+D I S + Y +
Sbjct: 191 ATATGGGKEANQYLRYSQPNAIKLSDPIMKDDIKVMDILRINGSKQKNWEGAGYTDVIGA 250
Query: 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDLKV 93
FA DV++ GS ++A I + +P+ K+
Sbjct: 251 FARGDVLMTPNGSWAITA---INEQKPNFKI 278
>4YNU-A nrPDB
Length = 571
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIES 98
D I+VG G+SGL A +++N PD+ V ++E+
Sbjct: 7 DYIVVGGGTSGLVVANRLSEN-PDVSVLLLEA 37
>2VVL-G nrPDB
Length = 495
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 58 KDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW 107
+D DK DVI++G G GL+A + K ++E+ GG SW
Sbjct: 32 EDTDKDGPWDVIVIGGGYCGLTATRDLTV--AGFKTLLLEARDRIGGRSW 79
>3ATQ-A nrPDB
Length = 453
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIES 98
DV+I+G G +G SAAY ++ R LK+ +++S
Sbjct: 8 DVLIIGGGFAGSSAAYQLS--RRGLKILLVDS 37
>4AF2-A nrPDB
Length = 201
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 209 NVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCAKRIVDIDQNQKLGGMKGLDMNH 268
NVI L+ ++N + Q +GV ++ DGP A+ +V ID+N + + +D
Sbjct: 135 NVITLSTFRN---AEFLQAYGVAIA----DGPLKGLAARAVVVIDENDNVIFSQLVDEIT 187
Query: 269 AEHD 272
E D
Sbjct: 188 TEPD 191
>3HVS-A nrPDB
Length = 167
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 209 NVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCAKRIVDIDQNQKLGGMKGLDMNH 268
NVI L+ ++N + Q +GV ++ DGP A+ +V ID+N + + +D
Sbjct: 101 NVITLSTFRN---AEFLQAYGVAIA----DGPLKGLAARAVVVIDENDNVIFSQLVDEIT 153
Query: 269 AEHD 272
E D
Sbjct: 154 TEPD 157
>5K1S-A nrPDB
Length = 362
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 99 SVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEI 131
S+APGG + G L S MV P + ++ELEI
Sbjct: 271 SMAPGGRVVVVGNLESGMVQLNPGLVIVKELEI 303
>3CGD-A nrPDB
Length = 480
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 23/40 (57%)
Query: 59 DLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIES 98
D D++ + +I+G ++G+SAA I +N + V +E
Sbjct: 30 DKDRWGSMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEK 69
>3NIX-A nrPDB
Length = 421
Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102
DV+++GAG +G AA ++ N+ KV I+E P
Sbjct: 7 DVLVIGAGPAGTVAASLV--NKSGFKVKIVEKQKFP 40
>1QO8-A nrPDB
Length = 566
Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 51/111 (45%), Gaps = 13/111 (11%)
Query: 26 LSDIVKKEDWSDFKFAPIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIA 85
SD KK+ W D + + +A+ + + V++VGAGS+G +A+ +A
Sbjct: 92 FSDAKKKKSWDD----GWDQDKIQKAIAA------GPSETTQVLVVGAGSAGFNAS--LA 139
Query: 86 KNRPDLKVCIIESSVAPGGGSWL-GGQLFSAMVMRKPAHLFLQELEIPYED 135
+ V +++ + GG S + G + + ++ AH ++E ED
Sbjct: 140 AKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIED 190
>3FCE-A nrPDB
Length = 512
Score = 28.9 bits (63), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 299 LNRMGPTFGAMALSGVHAAEQILKHFAA 326
+N GPT +A++G+H E++L + +
Sbjct: 291 MNTYGPTEATVAVTGIHVTEEVLDQYKS 318
>1GAL-A nrPDB
Length = 583
Score = 28.9 bits (63), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIES 98
D II G G +GL+ A + +N P++ V +IES
Sbjct: 21 DYIIAGGGLTGLTTAARLTEN-PNISVLVIES 51
>3X0V-A nrPDB
Length = 541
Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 68 VIIVGAGSSGLSAAYVIAKNR-PDLKVCIIESSVAPGG 104
V IVGAG SGL A ++ + P+L I ESS GG
Sbjct: 10 VCIVGAGVSGLYIAMILDDLKIPNLTYDIFESSSRTGG 47
>5UTH-A nrPDB
Length = 319
Score = 28.5 bits (62), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 9/50 (18%)
Query: 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFS 114
V DVII+G+G +G +AA I R LK + E G+ GG L +
Sbjct: 15 VHDVIIIGSGPAGYTAA--IYAARAQLKPLVFE-------GTQFGGALMT 55
>6CGR-k nrPDB
Length = 703
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 9 STSASQLHLNSTPVTHCLSDIVKKEDWSDFKFAPIRESTVSRAMTSRYF 57
STS L LN+ P+ + V K + S +F ST R + +Y
Sbjct: 593 STSGDTLRLNNRPIAVAMDGDVSKREQSKCRFMEAVPSTAPRRVCEQYL 641
>1GPE-A nrPDB
Length = 587
Score = 28.5 bits (62), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIE 97
D II G G +GL+ A + +N P +KV +IE
Sbjct: 26 DYIIAGGGLTGLTVAAKLTEN-PKIKVLVIE 55
>4Z44-A nrPDB
Length = 554
Score = 28.5 bits (62), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 65 VSDVIIVGAGSSG-LSAAYVIAKNRPDLKVCIIESSVAPGGG 105
+ +++IVG G++G ++A+Y++ + + +IES+ P G
Sbjct: 21 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIPRIG 62
>4HA6-A nrPDB
Length = 508
Score = 28.5 bits (62), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102
D++IVG GS+G A ++++ PD +V +IE+ P
Sbjct: 3 DIVIVGGGSAGSLLAARLSED-PDSRVLLIEAGEEP 37
>3K30-A nrPDB
Length = 690
Score = 28.1 bits (61), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 16/86 (18%)
Query: 37 DFKFAPIRESTVSRAMTSRYFKDLD------KFAVSDVIIVGAGSSGLSAAY-------- 82
D +PIR T + +M + + K + + V++VGAG SGL AA
Sbjct: 358 DLTMSPIR-CTQNPSMGEEWRRGWHPERIRAKESDARVLVVGAGPSGLEAARALGVRGYD 416
Query: 83 -VIAKNRPDLKVCIIESSVAPGGGSW 107
V+A+ DL + + S PG +W
Sbjct: 417 VVLAEAGRDLGGRVTQESALPGLSAW 442
>3Q9T-A nrPDB
Length = 577
Score = 28.1 bits (61), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVA 101
D +IVG G++G + A +A+N P++ V I+E+ +
Sbjct: 8 DFVIVGGGTAGNTVAGRLAEN-PNVTVLIVEAGIG 41
>6H3Z-A nrPDB
Length = 226
Score = 28.1 bits (61), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 6 TATSTSASQLHLNSTPVTHCLSDIV 30
TA +TSA++ H N P H + DI+
Sbjct: 40 TAAATSATEEHFNELPRPHAVLDII 64
>6H3G-A nrPDB
Length = 651
Score = 28.1 bits (61), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWL 108
DVI+ G G +G A +A P LKV +IE W+
Sbjct: 8 DVIVCGGGPAGCVVAGRLAYADPTLKVMLIEGGANNRDDPWV 49
>5VJ7-A nrPDB
Length = 476
Score = 28.1 bits (61), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 23/125 (18%)
Query: 68 VIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQ 127
V I+GAG +GL+ A +AK +V I E+ PGG G F R P + +
Sbjct: 157 VAIIGAGPAGLTCAADLAKM--GYEVTIYEALHQPGGVLTYGIPEF-----RLPKEILRK 209
Query: 128 ELE----IPYEDEGDYVVVK----------HAALFIST--VLSKVLQLPNVKLFNATCVE 171
EL+ + E + D++V K + A+FI T K+ +P + L
Sbjct: 210 ELKKLSLLGVEIKTDHIVGKTITIQELLQEYDAVFIGTGAGTPKLPNIPGINLNGIYSAN 269
Query: 172 DLVTR 176
+ +TR
Sbjct: 270 EFLTR 274
>3I6D-A nrPDB
Length = 470
Score = 28.1 bits (61), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 6/42 (14%)
Query: 68 VIIVGAGSSGLSAAY-----VIAKNRPDLKVCIIESSVAPGG 104
V+I+G G +GL+AA+ + KN P L++ ++E+S GG
Sbjct: 8 VVIIGGGITGLAAAFYMEKEIKEKNLP-LELTLVEASPRVGG 48
>1O5W-A nrPDB
Length = 534
Score = 27.7 bits (60), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW 107
DV+++G G SGL+AA ++++ + + V ++E+ GG ++
Sbjct: 23 DVVVIGGGISGLAAAKLLSEYK--INVLVLEARDRVGGRTY 61
>3IHG-A nrPDB
Length = 535
Score = 27.7 bits (60), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIE 97
DV++VGAG GLS A +A+ ++V ++E
Sbjct: 7 DVLVVGAGLGGLSTAMFLARQ--GVRVLVVE 35
>3KYB-A nrPDB
Length = 390
Score = 27.7 bits (60), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 19/132 (14%)
Query: 68 VIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW-LGGQLFSAMVMRKPAHLFL 126
++IVGAG SG +A+ +V II+ GG S+ + MV H+F
Sbjct: 6 ILIVGAGFSGAVIGRQLAEK--GHQVHIIDQRDHIGGNSYDARDSETNVMVHVYGPHIFH 63
Query: 127 QELEIPYEDEGDYVVVKHAALF------ISTVLSKVLQLP-NV----KLFNATCVEDLVT 175
+ E + + KHA + +TV +V LP N+ + F+ TC D
Sbjct: 64 TDNETVWN-----YINKHAEMMPYVNRVKATVNGQVFSLPINLHTINQFFSKTCSPDEAR 118
Query: 176 RPPTEKGEVTVA 187
EKG+ T+A
Sbjct: 119 ALIAEKGDSTIA 130
>5W4C-A nrPDB
Length = 371
Score = 27.3 bits (59), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 14/65 (21%)
Query: 42 PIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKN--RPDLKVCIIESS 99
P R VS+ M S+ V+I+G+G G +AA +A+ P L ++ +
Sbjct: 19 PKRTGEVSKKMHSK------------VVIIGSGPGGHTAAIYLARANLEPVLYEGMLANG 66
Query: 100 VAPGG 104
APGG
Sbjct: 67 FAPGG 71
>3LAD-A nrPDB
Length = 476
Score = 27.3 bits (59), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGG 110
DVI++GAG G AA I + LK +IE G + LGG
Sbjct: 5 DVIVIGAGPGGYVAA--IKSAQLGLKTALIEKYKGKEGKTALGG 46
>4CBQ-A nrPDB
Length = 314
Score = 27.3 bits (59), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMR 119
+ DV+I+G+G + +AA I R LK + E +A GG GGQL + ++
Sbjct: 4 IHDVVIIGSGPAAHTAA--IYLGRSSLKPVMYEGFMA--GGVAAGGQLTTTTIIE 54
>6B82-A nrPDB
Length = 509
Score = 27.3 bits (59), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 110 GQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHAALFIST-VLSKVLQLPNVKLFNA- 167
G L S +V P H+F Q+L+ Y D ++ H L ++ +K + + K+F
Sbjct: 35 GSLMS-LVSDSPPHIFFQDLQKKYGDLYSLMMGSHKLLIVNNHHHAKEILIKKGKIFAGR 93
Query: 168 --TCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQ-AHGTQC 204
T DL+TR + ++ A + W + HG C
Sbjct: 94 PRTVTTDLLTR---DGKDIAFADYSSTWKFHRKMVHGALC 130
Searching..................................................done
Results from round 2
Score E
Sequences producing significant alignments: (bits) Value
Sequences used in model and found again:
3FPZ-A nrPDB 535 e-152
3JSK-A nrPDB 388 e-108
1RP0-A nrPDB 363 e-101
4Y4M-A nrPDB 291 2e-79
4Y4N-A nrPDB 284 5e-77
Sequences not found previously or not previously below threshold:
3RHA-A nrPDB 52 4e-07
2GMH-A nrPDB 44 6e-05
2JB2-A nrPDB 43 2e-04
1F8S-A nrPDB 43 2e-04
4C5O-A nrPDB 42 3e-04
5JFC-L nrPDB 41 6e-04
1FOH-A nrPDB 41 7e-04
4GCM-A nrPDB 40 0.001
3LOV-A nrPDB 40 0.001
3KVE-A nrPDB 40 0.001
5NMX-A nrPDB 40 0.002
1REO-A nrPDB 39 0.002
5VJ7-A nrPDB 39 0.002
5UWY-A nrPDB 39 0.003
2CVJ-A nrPDB 39 0.003
5MJK-A nrPDB 39 0.003
2DKH-A nrPDB 39 0.004
2GAG-B nrPDB 39 0.004
3K30-A nrPDB 39 0.004
2VVL-G nrPDB 38 0.005
3WE0-A nrPDB 37 0.008
2Q7V-A nrPDB 37 0.009
5ER0-A nrPDB 37 0.009
2GV8-A nrPDB 37 0.013
4YRY-B nrPDB 37 0.015
4Z2R-A nrPDB 36 0.018
5L46-A nrPDB 36 0.030
4IVM-B nrPDB 35 0.037
4CBQ-A nrPDB 35 0.041
4C3X-A nrPDB 35 0.042
1ZOV-A nrPDB 35 0.042
3AB1-A nrPDB 35 0.043
3LAD-A nrPDB 35 0.045
4P9S-A nrPDB 35 0.046
4H7U-A nrPDB 35 0.051
2BXR-A nrPDB 34 0.061
3IHG-A nrPDB 34 0.062
6H3G-A nrPDB 34 0.066
4USR-A nrPDB 34 0.066
3NIX-A nrPDB 34 0.092
4JDR-A nrPDB 34 0.12
3R9U-A nrPDB 34 0.13
6CR0-A nrPDB 33 0.13
2HFB-A nrPDB 33 0.14
3RED-A nrPDB 33 0.14
3SM8-A nrPDB 33 0.14
3ATQ-A nrPDB 33 0.15
1O5W-A nrPDB 33 0.16
3NK2-X nrPDB 33 0.17
5TWC-A nrPDB 33 0.18
3BHF-A nrPDB 33 0.20
6C6P-A nrPDB 33 0.21
3UKH-A nrPDB 33 0.23
6J0Z-C nrPDB 32 0.23
4YNU-A nrPDB 32 0.25
3Q9T-A nrPDB 32 0.27
3CGD-A nrPDB 32 0.27
4TXK-A nrPDB 32 0.28
2BRY-A nrPDB 32 0.28
4UIR-A nrPDB 32 0.28
3URH-A nrPDB 32 0.30
4ZN0-A nrPDB 32 0.31
6BPY-A nrPDB 32 0.31
3HQ9-A nrPDB 32 0.32
4X4J-A nrPDB 32 0.32
4HA6-A nrPDB 32 0.32
3I6D-A nrPDB 32 0.34
2H88-A nrPDB 32 0.36
3GDN-A nrPDB 32 0.37
5W4C-A nrPDB 32 0.39
5U8W-A nrPDB 32 0.41
3ISH-A nrPDB 32 0.45
5J5Z-A nrPDB 32 0.47
4Z25-A nrPDB 32 0.49
5YGQ-A nrPDB 31 0.51
2ZBW-A nrPDB 31 0.52
1QO8-A nrPDB 31 0.53
1SEZ-A nrPDB 31 0.54
6BRD-A nrPDB 31 0.61
5TR3-A nrPDB 31 0.62
1PS9-A nrPDB 31 0.62
2UZZ-A nrPDB 31 0.64
3X0V-A nrPDB 31 0.67
6BZ0-A nrPDB 31 0.68
4OVI-A nrPDB 31 0.68
4TLZ-A nrPDB 31 0.72
4A6N-B nrPDB 31 0.77
2YQU-A nrPDB 31 0.83
6GAR-A nrPDB 31 0.86
5MOG-A nrPDB 31 0.87
4IV9-A nrPDB 31 0.87
1ZDL-A nrPDB 31 0.89
5BR7-A nrPDB 31 0.90
5UTH-A nrPDB 31 0.91
1GPE-A nrPDB 31 1.0
6DLL-A nrPDB 31 1.0
4MOP-A nrPDB 31 1.0
4RPJ-A nrPDB 31 1.0
2A87-A nrPDB 31 1.1
1GAL-A nrPDB 30 1.2
6BWT-A nrPDB 30 1.2
2IVE-A nrPDB 30 1.3
4NTC-A nrPDB 30 1.4
3ABT-A nrPDB 30 1.4
5L3D-A nrPDB 30 1.4
3IC9-A nrPDB 30 1.4
5I68-A nrPDB 30 1.5
2IPI-A nrPDB 30 1.5
3C4A-A nrPDB 30 1.6
5KXJ-A nrPDB 30 1.7
2QA2-A nrPDB 30 1.7
1NAA-A nrPDB 30 1.9
4N9X-A nrPDB 29 2.0
4K22-A nrPDB 29 2.0
5X6Z-C nrPDB 29 2.1
6GAS-A nrPDB 29 2.6
5ZBC-A nrPDB 29 2.7
1V59-A nrPDB 29 2.7
1E1N-A nrPDB 29 2.8
5Z70-A nrPDB 29 2.8
5XGV-A nrPDB 29 2.9
6H3Z-A nrPDB 29 3.1
1KNR-A nrPDB 29 3.3
4EIQ-A nrPDB 29 3.6
3LZX-A nrPDB 29 3.9
3II4-A nrPDB 29 4.0
4ZTK-A nrPDB 28 4.4
1DOD-A nrPDB 28 4.5
6AON-A nrPDB 28 5.1
1EBD-A nrPDB 28 5.3
3WXM-B nrPDB 28 5.6
5U63-A nrPDB 27 7.5
1XDI-A nrPDB 27 8.3
3D8X-A nrPDB 27 9.2
>3FPZ-A nrPDB
Length = 326
Score = 535 bits (1378), Expect = e-152, Method: Composition-based stats.
Identities = 325/326 (99%), Positives = 325/326 (99%)
Query: 1 MSATSTATSTSASQLHLNSTPVTHCLSDIVKKEDWSDFKFAPIRESTVSRAMTSRYFKDL 60
MSATSTATSTSASQLHLNSTPVTHCLSDIVKKEDWSDFKFAPIRESTVSRAMTSRYFKDL
Sbjct: 1 MSATSTATSTSASQLHLNSTPVTHCLSDIVKKEDWSDFKFAPIRESTVSRAMTSRYFKDL 60
Query: 61 DKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRK 120
DKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRK
Sbjct: 61 DKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRK 120
Query: 121 PAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTE 180
PAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTE
Sbjct: 121 PAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTE 180
Query: 181 KGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGP 240
KGEVTVAGVVTNWTLVTQAHGTQC MDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGP
Sbjct: 181 KGEVTVAGVVTNWTLVTQAHGTQCSMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGP 240
Query: 241 FGAFCAKRIVDIDQNQKLGGMKGLDMNHAEHDVVIHSGAYAGVDNMYFAGMEVAELDGLN 300
FGAFCAKRIVDIDQNQKLGGMKGLDMNHAEHDVVIHSGAYAGVDNMYFAGMEVAELDGLN
Sbjct: 241 FGAFCAKRIVDIDQNQKLGGMKGLDMNHAEHDVVIHSGAYAGVDNMYFAGMEVAELDGLN 300
Query: 301 RMGPTFGAMALSGVHAAEQILKHFAA 326
RMGPTFGAMALSGVHAAEQILKHFAA
Sbjct: 301 RMGPTFGAMALSGVHAAEQILKHFAA 326
>3JSK-A nrPDB
Length = 344
Score = 388 bits (996), Expect = e-108, Method: Composition-based stats.
Identities = 178/302 (58%), Positives = 214/302 (70%), Gaps = 30/302 (9%)
Query: 36 SDFKFAPIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCI 95
F F+PIRESTVSRAMT RYF DLD A +D++IVGAGS GLSAAYV++ RPDL++ I
Sbjct: 50 DAFTFSPIRESTVSRAMTRRYFADLDAHAETDIVIVGAGSCGLSAAYVLSTLRPDLRITI 109
Query: 96 IESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSK 155
+E+ VAPGGG+WLGGQLFSAMVMRKPA +FL E+ +PYEDEGDYVVVKHAALF STVLSK
Sbjct: 110 VEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDYVVVKHAALFTSTVLSK 169
Query: 156 VLQLPNVKLFNATCVEDLVTRP-------------PTEKGEVTVAGVVTNWTLVTQAHGT 202
VLQ PNVKLFNAT VEDL+TR ++ +V +AGVVTNWTLV+ H
Sbjct: 170 VLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDD 229
Query: 203 QCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCAKRIVDIDQNQKLGGMK 262
Q MDPN I VI+STTGHDGPFGAF KR+V + Q ++L GM+
Sbjct: 230 QSSMDPNTINAP---------------VIISTTGHDGPFGAFSVKRLVSMKQMERLNGMR 274
Query: 263 GLDMNHAEHDVVIHSGAYAGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILK 322
GLDM AE +V ++ V + GME++E+DG NRMGPTFGAMALSGV AA + ++
Sbjct: 275 GLDMQSAEDAIVNNTREI--VPGLIVGGMELSEIDGANRMGPTFGAMALSGVKAAHEAIR 332
Query: 323 HF 324
F
Sbjct: 333 VF 334
>1RP0-A nrPDB
Length = 284
Score = 363 bits (931), Expect = e-101, Method: Composition-based stats.
Identities = 155/292 (53%), Positives = 193/292 (66%), Gaps = 24/292 (8%)
Query: 34 DWSDFKFAPIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKV 93
D + F F PI+ES VSR MT RY D+ +A +DV++VGAGS+GLSAAY I+KN P+++V
Sbjct: 8 DLNAFTFDPIKESIVSREMTRRYMTDMITYAETDVVVVGAGSAGLSAAYEISKN-PNVQV 66
Query: 94 CIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHAALFISTVL 153
IIE SV+PGGG+WLGGQLFSAM++RKPAHLFL E+ + Y+++ YVVVKHAALF ST++
Sbjct: 67 AIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAALFTSTIM 126
Query: 154 SKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIEL 213
SK+L PNVKLFNA EDL+ + V GVVTNW LV Q H TQ CMDPNV+E
Sbjct: 127 SKLLARPNVKLFNAVAAEDLIVKG------NRVGGVVTNWALVAQNHHTQSCMDPNVMEA 180
Query: 214 AGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCAKRIVDIDQNQKLGGMKGLDMNHAEHDV 273
+++S+ GHDGPFGA KR+ I + GMK LDMN AE +
Sbjct: 181 ---------------KIVVSSCGHDGPFGATGVKRLKSIGMIDHVPGMKALDMNTAEDAI 225
Query: 274 VIHSGAYAGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325
V + V M GMEVAE+DG RMGPTFGAM +SG A + LK
Sbjct: 226 VRLTREV--VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALKALG 275
>4Y4M-A nrPDB
Length = 290
Score = 291 bits (745), Expect = 2e-79, Method: Composition-based stats.
Identities = 79/280 (28%), Positives = 121/280 (43%), Gaps = 32/280 (11%)
Query: 45 ESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104
E+ ++A+ F +DV+IVGAG SGL+ A +AK KV ++E +A GG
Sbjct: 39 ETKTTKAILKASFDMWLDIVEADVVIVGAGPSGLTCARYLAKE--GFKVVVLERHLAFGG 96
Query: 105 GSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSKVLQLPNVKL 164
G+W GG F +V+ +PA L+E+ I D GD V ++ + L+ K+
Sbjct: 97 GTWGGGMGFPYIVVEEPADELLREVGIKLIDMGDGYYVA-DSVEVPAKLAVAAMDAGAKI 155
Query: 165 FNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDL 224
VEDL+ R E VAGVV N + +A +DP L
Sbjct: 156 LTGIVVEDLILR------EDGVAGVVINSYAIERA---GLHIDP---------------L 191
Query: 225 SQKHGVILSTTGHDGPFGAFCAKRIVDIDQNQKLGGMKGLDMNHAEHDVVIHSGAYAGVD 284
+ + V++ TGH+ K+ + G K + E+ ++ ++
Sbjct: 192 TIRSKVVVDATGHEASIVNILVKK---NKLEADVPGEKSMWAEKGENALLRNTREV--YP 246
Query: 285 NMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHF 324
N++ GM G RMG FG M LSG AE I +
Sbjct: 247 NLFVCGMAANASHGGYRMGAIFGGMYLSGKLCAELITEKL 286
>4Y4N-A nrPDB
Length = 286
Score = 284 bits (725), Expect = 5e-77, Method: Composition-based stats.
Identities = 76/281 (27%), Positives = 121/281 (43%), Gaps = 31/281 (11%)
Query: 45 ESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104
E +RA+ F DV IVG G SGL+AA IAK KV ++E +A GG
Sbjct: 32 EYATTRAILKSAFDMWLDIIDVDVAIVGGGPSGLTAARYIAKE--GYKVVVLERHLAFGG 89
Query: 105 GSWLGGQLFSAMVMRKPAHLFLQELEIPYED-EGDYVVVKHAALFISTVLSKVLQLPNVK 163
G+W GG F +V+ +PA L+E+ + E EG+ + ++ + L+ K
Sbjct: 90 GTWGGGMGFPYIVVEEPADEILREVGVKLEKVEGEDGLYTADSVEVPAKLAVGAIDAGAK 149
Query: 164 LFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRD 223
+ VEDLV R E VAGVV N + +A +DP I
Sbjct: 150 VLTGIVVEDLVLR------ENRVAGVVINSYAIEKA---GLHIDPITITAKY-------- 192
Query: 224 LSQKHGVILSTTGHDGPFGAFCAKRIVDIDQNQKLGGMKGLDMNHAEHDVVIHSGAYAGV 283
++ TGHD +++ ++ ++ G K + E+ ++ ++
Sbjct: 193 -------VVDATGHDASVVTTLSRKNPELGL--EVPGEKSMWAEKGENALLRNTREV--Y 241
Query: 284 DNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHF 324
++ GM + +RMG FG M +SG AE I++
Sbjct: 242 PGLFVCGMAANAVYAGHRMGAIFGGMYISGKKCAEMIVEKL 282
>3RHA-A nrPDB
Length = 482
Score = 51.7 bits (122), Expect = 4e-07, Method: Composition-based stats.
Identities = 51/246 (20%), Positives = 91/246 (36%), Gaps = 38/246 (15%)
Query: 59 DLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW----------L 108
+ + DV+IVGAG SGL+AA + K L V ++E+ GG +W +
Sbjct: 1 MVMQNLDRDVVIVGAGPSGLTAARELKK--AGLSVAVLEARDRVGGRTWTDTIDGAMLEI 58
Query: 109 GGQLFS---AMVMRKPAHLFLQELEIPY---EDEGDYVVVKHAA--------LFISTVLS 154
GGQ S ++M L EL + +G+ V + F +
Sbjct: 59 GGQWVSPDQTVLME-----LLDELGLKMYSRYRDGESVYIGADGKRTQYTGDTFPVNETT 113
Query: 155 KVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELA 214
K V + + E T P + + + L ++ + C + +
Sbjct: 114 KAEMDKLVAILDELAAEIGPTEPWAHPKARELDTISFHHWLRQNSNDEEACNNIGLFIAG 173
Query: 215 GYKNDGTRDLSQKHGVILSTTGHDGPFGAFCAKRIVDIDQNQKLGGMKGLD-MNHAE--H 271
G S V+++ + G F + + + +GGM+ + + AE
Sbjct: 174 GMLTKPAHAFSALQAVLMAASA--GSFSHLTDEDFILDKRV--IGGMQQVSLLQAAELGD 229
Query: 272 DVVIHS 277
DVV++S
Sbjct: 230 DVVLNS 235
>2GMH-A nrPDB
Length = 584
Score = 44.4 bits (103), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 65 VSDVIIVGAGSSGLSAAYVI----AKNRPDLKVCIIESSVAPGGGSWLGGQLFS 114
+DV+IVGAG +GLSAA + A++ DL+VC++E + G + G L
Sbjct: 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDP 88
>2JB2-A nrPDB
Length = 489
Score = 43.3 bits (100), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 68 VIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW 107
V+++G G +GL +A+ + K KV ++E+ PGG W
Sbjct: 14 VVVLGGGPAGLCSAFELQK--AGYKVTVLEARTRPGGRVW 51
>1F8S-A nrPDB
Length = 498
Score = 42.9 bits (99), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/37 (54%), Positives = 27/37 (72%), Gaps = 2/37 (5%)
Query: 68 VIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104
V+IVGAG +GLSAAYV+A +V ++E+S PGG
Sbjct: 36 VVIVGAGMAGLSAAYVLA--GAGHQVTVLEASERPGG 70
>4C5O-A nrPDB
Length = 357
Score = 42.5 bits (98), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Query: 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGG---SWLGGQLFS 114
DV+++G G SGLSA Y + R L I+++ +PGG +W LFS
Sbjct: 4 VDVVVIGGGQSGLSAGYFL--RRSGLSYVILDAEASPGGAWQHAWHSLHLFS 53
>5JFC-L nrPDB
Length = 474
Score = 41.3 bits (95), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 68 VIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLF--SAMVMRKPAHLF 125
V I+GAG +GL+ A +AK +V I E+ PGG G F +++K
Sbjct: 157 VAIIGAGPAGLTCAADLAKM--GYEVTIYEALHQPGGVLIYGIPEFRLPKEIVKKEL-EN 213
Query: 126 LQELEIPYE 134
L+ L + E
Sbjct: 214 LRRLGVKIE 222
>1FOH-A nrPDB
Length = 664
Score = 41.0 bits (94), Expect = 7e-04, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 26/35 (74%), Gaps = 3/35 (8%)
Query: 67 DVIIVGAGSSGLSAAYVIA---KNRPDLKVCIIES 98
DV+IVGAG +GL AA V++ + +PDLKV II+
Sbjct: 9 DVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDK 43
>4GCM-A nrPDB
Length = 312
Score = 40.2 bits (92), Expect = 0.001, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104
D+ I+GAG +G++AA + R +LK +IE + PGG
Sbjct: 5 IDFDIAIIGAGPAGMTAAVYAS--RANLKTVMIERGI-PGG 42
>3LOV-A nrPDB
Length = 475
Score = 40.2 bits (92), Expect = 0.001, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 68 VIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104
++IVG G +GL+AAY + PDL + ++E+ GG
Sbjct: 7 LVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGG 43
>3KVE-A nrPDB
Length = 486
Score = 40.2 bits (92), Expect = 0.001, Method: Composition-based stats.
Identities = 20/37 (54%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
Query: 68 VIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104
V++VGAG SGLSAAYV+A KV ++E+S GG
Sbjct: 36 VVVVGAGMSGLSAAYVLA--GAGHKVTVLEASERAGG 70
>5NMX-A nrPDB
Length = 425
Score = 39.8 bits (91), Expect = 0.002, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 7/42 (16%)
Query: 68 VIIVGAGSSGLSAAYVIAKNRPDLKVCIIES--SVAPGGGSW 107
V ++GAG SGL+AA + + +V + E V GG+W
Sbjct: 4 VAVLGAGPSGLTAARYL--KQAGFEVMVFERYHHV---GGTW 40
>1REO-A nrPDB
Length = 486
Score = 39.4 bits (90), Expect = 0.002, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
Query: 68 VIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104
V++VGAG SGLSAAYV++ +V ++E+S GG
Sbjct: 36 VVVVGAGMSGLSAAYVLS--GAGHQVTVLEASERAGG 70
>5VJ7-A nrPDB
Length = 476
Score = 39.0 bits (89), Expect = 0.002, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 68 VIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104
V I+GAG +GL+ A +AK +V I E+ PGG
Sbjct: 157 VAIIGAGPAGLTCAADLAKM--GYEVTIYEALHQPGG 191
>5UWY-A nrPDB
Length = 308
Score = 39.0 bits (89), Expect = 0.003, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Query: 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104
A+ D +I+G+G +G++AA A R +L V IIE APGG
Sbjct: 3 AMYDTLIIGSGPAGMTAALYAA--RSNLSVAIIEQG-APGG 40
Score = 29.8 bits (65), Expect = 1.6, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Query: 42 PIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIES 98
P E SR ++ D F D+++VG G S + A + + KV ++
Sbjct: 120 PGEEYYTSRGVSYCAVCDGAFFRDQDLLVVGGGDSAVEEAIYLTQFAK--KVTVVHR 174
>2CVJ-A nrPDB
Length = 180
Score = 38.6 bits (88), Expect = 0.003, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 11/68 (16%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQL----FSAMVMRKPA 122
DVI+VG G SGLSAA +A R LKV +++ GG S + G + ++
Sbjct: 3 DVIVVGGGPSGLSAALFLA--RAGLKVLVLD-----GGRSKVKGVSRVPNYPGLLDEPSG 55
Query: 123 HLFLQELE 130
L+ LE
Sbjct: 56 EELLRRLE 63
>5MJK-A nrPDB
Length = 327
Score = 38.6 bits (88), Expect = 0.003, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 26/38 (68%), Gaps = 3/38 (7%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104
DV+I+G+G +G++AA A R ++K ++E V PGG
Sbjct: 26 DVVIIGSGPAGMTAAMYTA--RSEMKTLLLERGV-PGG 60
>2DKH-A nrPDB
Length = 639
Score = 38.6 bits (88), Expect = 0.004, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102
+ DV+IVG G +GL+ A +A PD++ CI+E P
Sbjct: 31 SQVDVLIVGCGPAGLTLAAQLAA-FPDIRTCIVEQKEGP 68
>2GAG-B nrPDB
Length = 405
Score = 38.6 bits (88), Expect = 0.004, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 21/38 (55%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104
D IIVG G GL+ AY +AKN V ++E GG
Sbjct: 23 DAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGWLAGG 60
>3K30-A nrPDB
Length = 690
Score = 38.6 bits (88), Expect = 0.004, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 17/121 (14%)
Query: 37 DFKFAPIRESTVSRAMTSRYFKDL------DKFAVSDVIIVGAGSSGLSAAY-------- 82
D +PIR T + +M + + K + + V++VGAG SGL AA
Sbjct: 358 DLTMSPIR-CTQNPSMGEEWRRGWHPERIRAKESDARVLVVGAGPSGLEAARALGVRGYD 416
Query: 83 -VIAKNRPDLKVCIIESSVAPGGGSWLGGQLF-SAMVMRKPAHLFLQELEIPYEDEGDYV 140
V+A+ DL + + S PG +W + + A++ P +E + +D ++
Sbjct: 417 VVLAEAGRDLGGRVTQESALPGLSAWGRVKEYREAVLAELPNVEIYRESPMTGDDIVEFG 476
Query: 141 V 141
Sbjct: 477 F 477
>2VVL-G nrPDB
Length = 495
Score = 38.3 bits (87), Expect = 0.005, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Query: 57 FKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQ-LFSA 115
+D DK DVI++G G GL+A + K ++E+ GG SW +
Sbjct: 31 IEDTDKDGPWDVIVIGGGYCGLTATRDLT--VAGFKTLLLEARDRIGGRSWSSNIDGYPY 88
>3WE0-A nrPDB
Length = 580
Score = 37.5 bits (85), Expect = 0.008, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 30/82 (36%), Gaps = 25/82 (30%)
Query: 56 YFKDLDKFAV-----------SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIE------- 97
F D + +V IVGAG +GL AAY + K LK + E
Sbjct: 45 AFDDWLEHPAGLGSIPAARHGEEVAIVGAGIAGLVAAYELMKL--GLKPVVYEASKMGGR 102
Query: 98 -SSVAPGGG----SWLGGQLFS 114
S A G + LGG F
Sbjct: 103 LRSQAFNGTDGIIAELGGMRFP 124
>2Q7V-A nrPDB
Length = 325
Score = 37.5 bits (85), Expect = 0.009, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW 107
DV+I+G G +GL+AA R L I+E + G +W
Sbjct: 8 DYDVVIIGGGPAGLTAAIY--TGRAQLSTLILEKGMPGGQIAW 48
>5ER0-A nrPDB
Length = 518
Score = 37.1 bits (84), Expect = 0.009, Method: Composition-based stats.
Identities = 43/210 (20%), Positives = 67/210 (31%), Gaps = 41/210 (19%)
Query: 58 KDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESS-----VAPGGGSWLGGQL 112
K + V +VG +G A I PD +V + E + ++ G +LGG+
Sbjct: 43 KAMADIGSMKVTVVGCTHAGTFAIKQILAEHPDAEVTVYERNDVISFLSCGIALYLGGK- 101
Query: 113 FSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVED 172
+ P LF E + G V + H + + P+ K VED
Sbjct: 102 -----VADPQGLFYSSPE-ELQKLGANVQMNH---------NVLAIDPDQK---TVTVED 143
Query: 173 LVTRPPTEKGEVTVAGVVTNWTLVTQ---------------AHGTQCCMDPNVIELAGYK 217
L T + + +W +V + AH D E
Sbjct: 144 LTNHAQTTESYDKLVMTSGSWPIVPKIPGIDSDRVKLCKNWAHAQALIEDAK--EAKRIT 201
Query: 218 NDGTRDLSQKHGVILSTTGHDGPFGAFCAK 247
G + + STTGHD A+
Sbjct: 202 VIGAGYIGAELAEAYSTTGHDVTLIDAMAR 231
>2GV8-A nrPDB
Length = 447
Score = 36.7 bits (83), Expect = 0.013, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 68 VIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104
+ I+GAG SGL A + + +V + E +PGG
Sbjct: 9 IAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGG 45
>4YRY-B nrPDB
Length = 468
Score = 36.7 bits (83), Expect = 0.015, Method: Composition-based stats.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 15/127 (11%)
Query: 68 VIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLF--SAMVMRKPAHLF 125
V +VG+G +GL+AA +AK V I E+ PGG G F ++ + +
Sbjct: 143 VAVVGSGPAGLTAAADLAKM--GYHVDIFEAFHKPGGVLVYGIPEFRLPKRIVEREVS-Y 199
Query: 126 LQELEIPYEDE---GDYVVVK-----HAALFISTVLS--KVLQLPNVKLFNATCVEDLVT 175
+++L + + G V VK + A+FI T K + +P L + +T
Sbjct: 200 IRKLGVNFHLNTVVGKTVKVKELLSEYDAVFIGTGAGTPKFMGIPGTNLNGVYSANEFLT 259
Query: 176 RPPTEKG 182
R K
Sbjct: 260 RVNLMKA 266
>4Z2R-A nrPDB
Length = 592
Score = 36.3 bits (82), Expect = 0.018, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIE--SSVAPGGGSWLGGQLFSAMVMRKP 121
A +DV+IVGAG +G +A ++A ++ +I S +PG S + Q ++
Sbjct: 11 AETDVLIVGAGPAGAMSATLLASL--GIRSLMINRWRSTSPGPRSHIINQRTMEILRDIG 68
Query: 122 AHLFLQELEIPYEDEGDYVVVKHAA 146
+ L +P E G++V A
Sbjct: 69 LEESAKSLAVPKEYMGEHVYATSLA 93
>5L46-A nrPDB
Length = 841
Score = 35.6 bits (80), Expect = 0.030, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Query: 58 KDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLK-VCIIESSVAPGGGSWLGGQLFSA 115
A + +I+G G G+S AY +AK +K V ++E S G +W L +
Sbjct: 17 TQWKDRAET--VIIGGGCVGVSLAYHLAK--AGMKDVVLLEKSELTAGSTWHAAGLTTY 71
>4IVM-B nrPDB
Length = 483
Score = 35.2 bits (79), Expect = 0.037, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 68 VIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104
V+++G G SGL+A+Y +++ KV ++ESS GG
Sbjct: 11 VVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGG 47
>4CBQ-A nrPDB
Length = 314
Score = 35.2 bits (79), Expect = 0.041, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMR 119
DV+I+G+G + +AA + R LK + E +A GG GGQL + ++
Sbjct: 6 DVVIIGSGPAAHTAAIYLG--RSSLKPVMYEGFMA--GGVAAGGQLTTTTIIE 54
>4C3X-A nrPDB
Length = 530
Score = 35.2 bits (79), Expect = 0.042, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 48/121 (39%), Gaps = 19/121 (15%)
Query: 55 RYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQL-- 112
+ +D DV++VG+G L+ AY A L ++E + GG S G
Sbjct: 19 SHMQDWTS--ECDVLVVGSGGGALTGAYTAAAQ--GLTTIVLEKTDRFGGTSAYSGASIW 74
Query: 113 FSAMVMRKPAHL---------FLQELEIPYEDEGDYVVVKHAALFISTVLSKVLQLPNVK 163
+++ A L +L+ L E E V+ A V++ + Q PN++
Sbjct: 75 LPGTQVQERAGLPDSTENARTYLRALLGDAESERQDAYVETA----PAVVALLEQNPNIE 130
Query: 164 L 164
Sbjct: 131 F 131
>1ZOV-A nrPDB
Length = 386
Score = 35.2 bits (79), Expect = 0.042, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIES 98
DVI+VGAGS G++A Y +AK +K +++S
Sbjct: 5 DVIVVGAGSMGMAAGYYLAKQ--GVKTLLVDS 34
>3AB1-A nrPDB
Length = 360
Score = 35.2 bits (79), Expect = 0.043, Method: Composition-based stats.
Identities = 62/290 (21%), Positives = 94/290 (32%), Gaps = 62/290 (21%)
Query: 61 DKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWL--------GGQL 112
D + D+ I+G G +G+ AA+ N ++ IIES GG
Sbjct: 10 DHHDMRDLTIIGGGPTGIFAAFQCGMN--NISCRIIESMPQLGGQLAALYPEKHIYDVAG 67
Query: 113 FS------------AMVMRKPAHLFLQELEIPYEDEGDYV---------VVKHAALFIST 151
F A R + L E Y D V + A+ I+
Sbjct: 68 FPEVPAIDLVESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAA 127
Query: 152 VLS-----KVLQLPNVKLFNAT-------CVED-----LVTRPPTEKGEVTVAGVVTNW- 193
L K+ QL N+ + VED +V + G++ N
Sbjct: 128 GLGAFEPRKLPQLGNIDHLTGSSVYYAVKSVEDFKGKRVVIVGGGDSALDWTVGLIKNAA 187
Query: 194 --TLVTQAHGTQCC-MDPNVIELAGYKNDGTRDLSQKHGVILSTTG---------HDGPF 241
TLV + H Q + +E A L + I + G DG
Sbjct: 188 SVTLVHRGHEFQGHGKTAHEVERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDGSK 247
Query: 242 GAFCAKR-IVDIDQNQKLGGMKGLDMNHAEHDVVIHSGAYAGVDNMYFAG 290
A R ++ I LG + D+ E+ +V+ S VD +Y AG
Sbjct: 248 WTVEADRLLILIGFKSNLGPLARWDLELYENALVVDSHMKTSVDGLYAAG 297
>3LAD-A nrPDB
Length = 476
Score = 35.2 bits (79), Expect = 0.045, Method: Composition-based stats.
Identities = 39/176 (22%), Positives = 66/176 (37%), Gaps = 14/176 (7%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFL 126
DVI++GAG G AA I + LK +IE G + LGG + + P+ L
Sbjct: 5 DVIVIGAGPGGYVAA--IKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCI--PSKALL 60
Query: 127 QELEIPYEDEGD-----YVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEK 181
+ + + + A+ + T++++ + V+ L+
Sbjct: 61 DS-SYKFHEAHESFKLHGISTGEVAIDVPTMIAR--KDQIVRNLTGGVAS-LIKANGVTL 116
Query: 182 GEVTVAGVVTNWTLVTQAHGTQCCMDP-NVIELAGYKNDGTRDLSQKHGVILSTTG 236
E + VT A G+ +D NVI +G K VI+ +TG
Sbjct: 117 FEGHGKLLAGKKVEVTAADGSSQVLDTENVILASGSKPVEIPPAPVDQDVIVDSTG 172
>4P9S-A nrPDB
Length = 848
Score = 35.2 bits (79), Expect = 0.046, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 59 DLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLK-VCIIESSVAPGGGSWLGGQLFSA 115
+ A + +I+G G G+S AY +AK ++ V ++E S G +W L +
Sbjct: 19 EWKDRAET--VIIGGGCVGVSLAYHLAK--AGMRDVVLLEKSELTAGSTWHAAGLTTY 72
>4H7U-A nrPDB
Length = 602
Score = 34.8 bits (78), Expect = 0.051, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 51 AMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESS 99
A+T ++ DL D I+ G G++GL A +++N + KV +IE+
Sbjct: 26 AITYQHPDDLPSGVDYDFIVAGGGTAGLVVASRLSENS-NWKVLVIEAG 73
>2BXR-A nrPDB
Length = 527
Score = 34.4 bits (77), Expect = 0.061, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW 107
DV+++G G SGLSAA ++ + + V ++E+ GG ++
Sbjct: 15 DVVVIGGGISGLSAAKLLTE--YGVSVLVLEARDRVGGRTY 53
>3IHG-A nrPDB
Length = 535
Score = 34.4 bits (77), Expect = 0.062, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Query: 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIES 98
DV++VGAG GLS A +A R ++V ++E
Sbjct: 5 EVDVLVVGAGLGGLSTAMFLA--RQGVRVLVVER 36
>6H3G-A nrPDB
Length = 651
Score = 34.4 bits (77), Expect = 0.066, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 19/43 (44%)
Query: 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW 107
DVI+ G G +G A +A P LKV +IE W
Sbjct: 6 EVDVIVCGGGPAGCVVAGRLAYADPTLKVMLIEGGANNRDDPW 48
>4USR-A nrPDB
Length = 361
Score = 34.4 bits (77), Expect = 0.066, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGG---SWLGGQLFS 114
DVI++G G + L+ AY + R L +++ PGG +W +LFS
Sbjct: 9 DVIVIGGGQAALTTAYFL--RRTSLSYLLLDEQPGPGGAWLHAWDSLRLFS 57
>3NIX-A nrPDB
Length = 421
Score = 34.0 bits (76), Expect = 0.092, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102
DV+++GAG +G AA ++ N+ KV I+E P
Sbjct: 6 VDVLVIGAGPAGTVAASLV--NKSGFKVKIVEKQKFP 40
>4JDR-A nrPDB
Length = 474
Score = 33.6 bits (75), Expect = 0.12, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 60 LDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104
+ + V+++GAG +G SAA+ A L+ I+E GG
Sbjct: 1 MSTEIKTQVVVLGAGPAGYSAAFRCADL--GLETVIVERYNTLGG 43
>3R9U-A nrPDB
Length = 315
Score = 33.6 bits (75), Expect = 0.13, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104
A+ DV I+G G +GLSA R LK ++ PGG
Sbjct: 3 AMLDVAIIGGGPAGLSAGLYAT--RGGLKNVVMFEKGMPGG 41
>6CR0-A nrPDB
Length = 440
Score = 33.3 bits (74), Expect = 0.13, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGS 106
D I+VGAG SGL AA ++ V IIE+ GG +
Sbjct: 10 DAIVVGAGFSGLVAARELSAQ--GRSVLIIEARHRLGGRT 47
>2HFB-A nrPDB
Length = 409
Score = 33.3 bits (74), Expect = 0.14, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Query: 3 ATSTATSTSASQLHLNSTPVTHCLSDIVKKEDWSDFKFAPIRESTVSRAMTSRYFKDLDK 62
AT+T A+Q S P LSD + K+D I S + Y +
Sbjct: 191 ATATGGGKEANQYLRYSQPNAIKLSDPIMKDDIKVMDILRINGSKQKNWEGAGYTDVIGA 250
Query: 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDLKV 93
FA DV++ GS ++A I + +P+ K+
Sbjct: 251 FARGDVLMTPNGSWAITA---INEQKPNFKI 278
>3RED-A nrPDB
Length = 521
Score = 33.3 bits (74), Expect = 0.14, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 52/126 (41%), Gaps = 19/126 (15%)
Query: 58 KDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG-GSWLGGQLFSAM 116
DL+ D +IVG G+SG A +++ KV ++E P + L F
Sbjct: 19 TDLELEGSYDYVIVGGGTSGCPLAATLSEK---YKVLVLERGTLPTAYPNLLTSDGFIYN 75
Query: 117 VMRK-----PAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVE 171
+ ++ P F+ I D+ V+ S + + V N K+F+A+ +E
Sbjct: 76 LQQEDDGQTPVERFVSGDGI---DDVRGRVLGG----TSMINAGVYARANTKIFSASGIE 128
Query: 172 ---DLV 174
DLV
Sbjct: 129 WDMDLV 134
>3SM8-A nrPDB
Length = 381
Score = 33.3 bits (74), Expect = 0.14, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Query: 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPG 103
+D +++GAG +G S Y ++ + +V ++E PG
Sbjct: 8 IEADYLVIGAGIAGASTGYWLSAHG---RVVVLEREAQPG 44
>3ATQ-A nrPDB
Length = 453
Score = 33.3 bits (74), Expect = 0.15, Method: Composition-based stats.
Identities = 39/176 (22%), Positives = 63/176 (35%), Gaps = 20/176 (11%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFL 126
DV+I+G G +G SAAY ++ R LK+ +++S G G S AH
Sbjct: 8 DVLIIGGGFAGSSAAYQLS--RRGLKILLVDSKPWNRIGDKPCGDAVS------KAH--F 57
Query: 127 QELEIPYED-EGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVT 185
+L +PY E + L+ + + NA V + ++G
Sbjct: 58 DKLGMPYPKGEELENKINGIKLYSPDMQTVWTVNGEGFELNAPLYNQRVLKEAQDRG--- 114
Query: 186 VAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPF 241
V W L T D V + +L+ V++ TG+ F
Sbjct: 115 ----VEIWDLTTAMKP--IFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSF 164
>1O5W-A nrPDB
Length = 534
Score = 33.3 bits (74), Expect = 0.16, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW 107
DV+++G G SGL+AA ++++ + + V ++E+ GG ++
Sbjct: 23 DVVVIGGGISGLAAAKLLSEYK--INVLVLEARDRVGGRTY 61
>3NK2-X nrPDB
Length = 431
Score = 33.3 bits (74), Expect = 0.17, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 8/48 (16%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFS 114
D I+VG G SGL AA + KV ++E GG LGG+ +S
Sbjct: 3 DAIVVGGGFSGLKAARDLT--NAGKKVLLLE------GGERLGGRAYS 42
>5TWC-A nrPDB
Length = 344
Score = 32.9 bits (73), Expect = 0.18, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 13/69 (18%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVA------PGGGSW-LGGQLFSAMVMR 119
DV I+G G SGL A++ +++ ++S + P W +GG +
Sbjct: 3 DVTIIGGGPSGLYASFYAGLRDMSVRLIDVQSELGGKMRIYPEKIIWDIGG------IAP 56
Query: 120 KPAHLFLQE 128
KP H L++
Sbjct: 57 KPCHEILKD 65
>3BHF-A nrPDB
Length = 390
Score = 32.9 bits (73), Expect = 0.20, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIES 98
DVI+VGAGS G++A Y +AK +K ++++
Sbjct: 6 DVIVVGAGSMGMAAGYQLAKQ--GVKTLLVDA 35
>6C6P-A nrPDB
Length = 458
Score = 32.9 bits (73), Expect = 0.21, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 48/134 (35%), Gaps = 27/134 (20%)
Query: 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVA-----------PGGGSWLGGQLF 113
+VIIVGAG G + A V++ R KV +IE + PGG L
Sbjct: 7 DPEVIIVGAGVLGSALAAVLS--RDGRKVTVIERDLKEPDRIVGEFLQPGGYHVLKDLGL 64
Query: 114 SAMVMRKPAHLF----------LQELEIPY----EDEGDYVVVKHAALFISTVLSKVLQL 159
V A + E++IPY ++ H FI ++ +
Sbjct: 65 GDTVEGLDAQVVNGYMIHDQESKSEVQIPYPLSENNQVQSGRAFHHGRFIMSLRKAAMAE 124
Query: 160 PNVKLFNATCVEDL 173
PN K ++ L
Sbjct: 125 PNAKFIEGVVLQLL 138
>3UKH-A nrPDB
Length = 519
Score = 32.9 bits (73), Expect = 0.23, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104
DV+++GAG +GL AA + I++S+ PGG
Sbjct: 5 ISVDVLVIGAGPTGLGAAKRL-NQIDGPSWMIVDSNETPGG 44
>6J0Z-C nrPDB
Length = 491
Score = 32.5 bits (72), Expect = 0.23, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 8/75 (10%)
Query: 61 DKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRK 120
+F SDV++VGAG +GL A + + V +++ P S FSA + +
Sbjct: 1 MEFYDSDVVVVGAGPTGLMLAGEL--RLAGVSVVVLDKLAEPIKES--RALGFSARTIEE 56
Query: 121 PAHLFLQ----ELEI 131
A L E+ +
Sbjct: 57 FAQRGLMDRFGEVGV 71
>4YNU-A nrPDB
Length = 571
Score = 32.5 bits (72), Expect = 0.25, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVA 101
D I+VG G+SGL A +++N PD+ V ++E+ +
Sbjct: 7 DYIVVGGGTSGLVVANRLSEN-PDVSVLLLEAGAS 40
>3Q9T-A nrPDB
Length = 577
Score = 32.5 bits (72), Expect = 0.27, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVA 101
D +IVG G++G + A +A+N P++ V I+E+ +
Sbjct: 8 DFVIVGGGTAGNTVAGRLAEN-PNVTVLIVEAGIG 41
>3CGD-A nrPDB
Length = 480
Score = 32.5 bits (72), Expect = 0.27, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 23/42 (54%)
Query: 58 KDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESS 99
D D++ + +I+G ++G+SAA I +N + V +E
Sbjct: 29 DDKDRWGSMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKG 70
>4TXK-A nrPDB
Length = 615
Score = 32.5 bits (72), Expect = 0.28, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102
+ ++VGAG GL AA +A +V ++E +
Sbjct: 85 TKCLVVGAGPCGLRAAVELA--LLGARVVLVEKRIKF 119
>2BRY-A nrPDB
Length = 497
Score = 32.5 bits (72), Expect = 0.28, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102
+ ++VGAG GL AA +A +V ++E +
Sbjct: 93 TKCLVVGAGPCGLRAAVELA--LLGARVVLVEKRIKF 127
>4UIR-A nrPDB
Length = 646
Score = 32.5 bits (72), Expect = 0.28, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 8/97 (8%)
Query: 62 KFAVSDVIIVGAGSSGLSAAYVIAKNR--PDLKVCIIESSVAPGGGSWLGGQLFSAMVMR 119
+ S + I+G+G +G+SAAY ++ P + +E GG G ++R
Sbjct: 59 SYDNSKIYIIGSGIAGMSAAYYFIRDGHVPAKNITFLEQLHIDGGSLDGAGNPTDGYIIR 118
Query: 120 KPAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSKV 156
+E+++ YE+ D + AL + S +
Sbjct: 119 GG-----REMDMTYENLWD-MFQDIPALEMPAPYSVL 149
>3URH-A nrPDB
Length = 491
Score = 32.5 bits (72), Expect = 0.30, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Query: 56 YFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104
YF+ + + D+I++G+G G A I + +KV ++E GG
Sbjct: 19 YFQSMMAY---DLIVIGSGPGGYVCA--IKAAQLGMKVAVVEKRSTYGG 62
>4ZN0-A nrPDB
Length = 311
Score = 32.1 bits (71), Expect = 0.31, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 44/125 (35%), Gaps = 17/125 (13%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWL----GGQLFSAMVMRKPA 122
D+II+G G +GL+A R L I+E + G S F ++ +
Sbjct: 9 DLIIIGGGPAGLTAGIYAV--RYGLDTLILERNEISGQISMADIVENYPGFPSISGLELM 66
Query: 123 HLF---LQELEIP--------YEDEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVE 171
F QE+ + EG ++ + + + N K +
Sbjct: 67 ERFRTHAQEVGVKTTITEVLSVRSEGTKKIITTDSGDLEAKAVIIATGANPKHLGVPGEK 126
Query: 172 DLVTR 176
+L+++
Sbjct: 127 ELISK 131
>6BPY-A nrPDB
Length = 374
Score = 32.1 bits (71), Expect = 0.31, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQL 112
+ V+I+G+G + +AA ++ R +LK + E +A G+ GGQL
Sbjct: 2 MVHTKVVIIGSGPAAHTAAIYLS--RAELKPVLYEGMLA--NGTAAGGQL 47
>3HQ9-A nrPDB
Length = 345
Score = 32.1 bits (71), Expect = 0.32, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Query: 86 KNRPDLKVCIIESSVAPGGGSWLGGQL-FSAMVMRKPAHLFLQELEIPYEDEGDYVVVKH 144
K LK+ + + VA GG LGG F V+ KPA L P D+G + V
Sbjct: 206 KQTAGLKLFLDKGCVACHGGLNLGGTGYFPFGVVEKPAENIL-----PLGDKGRFAVTNT 260
Query: 145 A 145
A
Sbjct: 261 A 261
>4X4J-A nrPDB
Length = 507
Score = 32.1 bits (71), Expect = 0.32, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
Query: 62 KFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKP 121
+ V+I GAG +GL A + + V ++E A G S G M +
Sbjct: 19 SHMDAPVVIAGAGPAGLMLAGEL--RLAGIGVVVLERLPARTGESRGLGFTARTMEVFDQ 76
Query: 122 AHLFLQELEIPYEDEGDYV 140
L + E+ D+G +
Sbjct: 77 RGLLRRFGEVQTSDQGHFG 95
>4HA6-A nrPDB
Length = 508
Score = 32.1 bits (71), Expect = 0.32, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 9/56 (16%)
Query: 67 DVIIVGAGSSG-LSAAYVIAKNRPDLKVCIIESSVAP------GGGSWLGGQLFSA 115
D++IVG GS+G L AA + PD +V +IE+ P +W Q S
Sbjct: 3 DIVIVGGGSAGSLLAARL--SEDPDSRVLLIEAGEEPTDPDIWNPAAWPALQGRSY 56
>3I6D-A nrPDB
Length = 470
Score = 32.1 bits (71), Expect = 0.34, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Query: 68 VIIVGAGSSGLSAAYVIAKNRPD----LKVCIIESSVAPGG 104
V+I+G G +GL+AA+ + K + L++ ++E+S GG
Sbjct: 8 VVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGG 48
>2H88-A nrPDB
Length = 621
Score = 32.1 bits (71), Expect = 0.36, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Query: 261 MKGLDMNHAEHDVVIHSGAYAGVDNMYFAGMEVAE-LDGLNRMGP-TFGAMALSGVHAAE 318
M G+ N+ + +G V +Y G + + G NR+G + + + G A
Sbjct: 367 MGGIPTNYKGQVITHVNGEDKVVPGLYACGEAASASVHGANRLGANSLLDLVVFGRACAL 426
Query: 319 QILK 322
I +
Sbjct: 427 TIAE 430
>3GDN-A nrPDB
Length = 521
Score = 32.1 bits (71), Expect = 0.37, Method: Composition-based stats.
Identities = 36/162 (22%), Positives = 64/162 (39%), Gaps = 20/162 (12%)
Query: 58 KDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG-GSWLGGQLFSAM 116
DL+ D +IVG G+SG A +++ KV ++E P + L F
Sbjct: 19 TDLELEGSYDYVIVGGGTSGCPLAATLSEK---YKVLVLERGSLPTAYPNVLTADGFVYN 75
Query: 117 VMRK-----PAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVE 171
+ ++ P F+ E I D V+ S + + V N +++A+ V+
Sbjct: 76 LQQEDDGKTPVERFVSEDGI---DNVRGRVLGG----TSIINAGVYARANTSIYSASGVD 128
Query: 172 ---DLVTRPPTEKGEVTVAGVVT-NWTLVTQAHGTQCCMDPN 209
DLV + + V + +W VT+ + + PN
Sbjct: 129 WDMDLVNQTYEWVEDTIVYKPNSQSWQSVTKTAFLEAGVHPN 170
>5W4C-A nrPDB
Length = 371
Score = 31.7 bits (70), Expect = 0.39, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 10/64 (15%)
Query: 43 IRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAK--NRPDLKVCIIESSV 100
+RE + ++ + S V+I+G+G G +AA +A+ P L ++ +
Sbjct: 16 VREPKRTGEVSKK--------MHSKVVIIGSGPGGHTAAIYLARANLEPVLYEGMLANGF 67
Query: 101 APGG 104
APGG
Sbjct: 68 APGG 71
>5U8W-A nrPDB
Length = 481
Score = 31.7 bits (70), Expect = 0.41, Method: Composition-based stats.
Identities = 36/183 (19%), Positives = 62/183 (33%), Gaps = 28/183 (15%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFL 126
DV+++GAG G AA I + LK IE + G LGG + + P+ L
Sbjct: 9 DVVVIGAGPGGYVAA--IRAAQLGLKTACIEKYIGKEGKVALGGTCLNVGCI--PSKALL 64
Query: 127 QELEIPYEDEGDYVVV-----KHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEK 181
Y + + V K + + ++++ A V++L T
Sbjct: 65 DS-SYKYHEAKEAFKVHGIEAKGVTIDVPAMVAR----------KANIVKNLTGGIATLF 113
Query: 182 GEVTVAGVVTNWTLVTQAHGTQCCMD--------PNVIELAGYKNDGTRDLSQKHGVILS 233
V + L+ +D NVI +G + +I+
Sbjct: 114 KANGVTSFEGHGKLLANKQVEVTGLDGKTQVLEAENVIIASGSRPVEIPPAPLTDDIIVD 173
Query: 234 TTG 236
+TG
Sbjct: 174 STG 176
>3ISH-A nrPDB
Length = 311
Score = 31.7 bits (70), Expect = 0.45, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRK 120
D I+G G +GLSA R +K ++ PGG ++ + +++
Sbjct: 3 DCAIIGGGPAGLSAGLYAT--RGGVKNAVLFEKGMPGGQITGSSEIENYPGVKE 54
>5J5Z-A nrPDB
Length = 496
Score = 31.7 bits (70), Expect = 0.47, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 61 DKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104
D+ +DV ++G+G G AA I + K IE + GG
Sbjct: 24 DQPIDADVTVIGSGPGGYVAA--IKAAQLGFKTVCIEKNETLGG 65
>4Z25-A nrPDB
Length = 652
Score = 31.7 bits (70), Expect = 0.49, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESS 99
D++I+GAG++G A+ +A+ ++K+ ++E+
Sbjct: 8 DIVIIGAGAAGSLLAHYLAR-FSNMKIILLEAG 39
>5YGQ-A nrPDB
Length = 342
Score = 31.3 bits (69), Expect = 0.51, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 60 LDKFAVSDVIIVGAGSSGLSAAYVI 84
+ + +DV+IVGAG GL A + +
Sbjct: 1 MTETIKTDVLIVGAGPCGLFAVFEL 25
>2ZBW-A nrPDB
Length = 335
Score = 31.3 bits (69), Expect = 0.52, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVC 94
+DV+IVGAG +GL A + + +
Sbjct: 6 TDVLIVGAGPTGLFAGFYVGMRGLSFRFV 34
>1QO8-A nrPDB
Length = 566
Score = 31.3 bits (69), Expect = 0.53, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 13/111 (11%)
Query: 26 LSDIVKKEDWSDFKFAPIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIA 85
SD KK+ W D + + +A+ + + + V++VGAGS+G +A+ +A
Sbjct: 92 FSDAKKKKSWDD----GWDQDKIQKAIAAGPSE------TTQVLVVGAGSAGFNAS--LA 139
Query: 86 KNRPDLKVCIIESSVAPGGGSWLGGQLFSAM-VMRKPAHLFLQELEIPYED 135
+ V +++ + GG S + +A+ ++ AH ++E ED
Sbjct: 140 AKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIED 190
>1SEZ-A nrPDB
Length = 504
Score = 31.3 bits (69), Expect = 0.54, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Query: 68 VIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104
V ++GAG SGL+AAY + L V + E+ GG
Sbjct: 16 VAVIGAGVSGLAAAYKL--KIHGLNVTVFEAEGKAGG 50
>6BRD-A nrPDB
Length = 476
Score = 31.3 bits (69), Expect = 0.61, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102
DVI+VG G +GL A + ++V ++E P
Sbjct: 3 DVIVVGGGPTGLMLAGEL--RLHGVRVLVLEKETEP 36
>5TR3-A nrPDB
Length = 481
Score = 31.3 bits (69), Expect = 0.62, Method: Composition-based stats.
Identities = 43/178 (24%), Positives = 66/178 (37%), Gaps = 18/178 (10%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFL 126
DV+++GAG G AA I + LK IE G LGG + + P+ L
Sbjct: 9 DVVVIGAGPGGYVAA--IKAAQLGLKTACIEKYTDAEGKLALGGTCLNVGCI--PSKALL 64
Query: 127 QELEIPYEDEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTV 186
Y++ + V + V V + K A V++L T V
Sbjct: 65 DS-SWKYKEAKESFNVH--GISTGEVKMDVAAMVGRK---AGIVKNLTGGVATLFKANGV 118
Query: 187 AGVVTNWTL-------VTQAHGTQCCMDP-NVIELAGYKNDGTRDLSQKHGVILSTTG 236
+ + L VT+A GT ++ NVI +G + VI+ +TG
Sbjct: 119 TSIQGHGKLLAGKKVEVTKADGTTEVIEAENVILASGSRPIDIPPAPVDQNVIVDSTG 176
>1PS9-A nrPDB
Length = 671
Score = 31.3 bits (69), Expect = 0.62, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Query: 50 RAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104
RA L ++ +VGAG +GL A+ I +V + ++ GG
Sbjct: 358 RACHETKMPILPAVQKKNLAVVGAGPAGL--AFAINAAARGHQVTLFDAHSEIGG 410
>2UZZ-A nrPDB
Length = 372
Score = 31.3 bits (69), Expect = 0.64, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102
D+II+G+GS G +A Y R L V + ++ + P
Sbjct: 4 DLIIIGSGSVGAAAGYYAT--RAGLNVLMTDAHMPP 37
>3X0V-A nrPDB
Length = 541
Score = 30.9 bits (68), Expect = 0.67, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 48/131 (36%), Gaps = 20/131 (15%)
Query: 68 VIIVGAGSSGLSAAYVIAKNR-PDLKVCIIESSVAPGGGSW-------------LGGQLF 113
V IVGAG SGL A ++ + P+L I ESS GG + +G +
Sbjct: 10 VCIVGAGVSGLYIAMILDDLKIPNLTYDIFESSSRTGGRLYTHHFTDAKHDYYDIGAMRY 69
Query: 114 SAMVMRKPAHLFLQELEIPYEDEGDYVVVKHAA--LFISTVLSKVLQLP-NVKLFNATCV 170
+ K + +P Y + L+ + +K + P V + N V
Sbjct: 70 PDIPSMKRTFNLFKRTGMPLIK---YYLDGENTPQLYNNHFFAKGVVDPYMVSVANGGTV 126
Query: 171 EDLVTRPPTEK 181
D V EK
Sbjct: 127 PDDVVDSVGEK 137
>6BZ0-A nrPDB
Length = 480
Score = 30.9 bits (68), Expect = 0.68, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLG 109
D++++G G G AA I + KV IE + G S G
Sbjct: 9 DLVVIGGGPGGYEAA--IRAAQLGFKVACIEKRIHNGKPSLGG 49
>4OVI-A nrPDB
Length = 542
Score = 30.9 bits (68), Expect = 0.68, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW 107
DV++VGAG SGL A Y + + + V V GG W
Sbjct: 16 EVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDV---GGVW 55
>4TLZ-A nrPDB
Length = 443
Score = 30.9 bits (68), Expect = 0.72, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMR 119
DV+ VG G + LS A + ++ L E + SW G L A M+
Sbjct: 32 DVVGVGFGPANLSLAVALEESPAALTSAFFERRASI---SWHQGMLLPAAKMQ 81
>4A6N-B nrPDB
Length = 398
Score = 30.9 bits (68), Expect = 0.77, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDLKV 93
+ +V I+G G GL+ A ++ +N D+ V
Sbjct: 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSV 54
>2YQU-A nrPDB
Length = 455
Score = 30.9 bits (68), Expect = 0.83, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104
D++++GAG G AA I + +KV ++E A GG
Sbjct: 3 DLLVIGAGPGGYVAA--IRAAQLGMKVGVVEKEKALGG 38
>6GAR-A nrPDB
Length = 349
Score = 30.9 bits (68), Expect = 0.86, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104
DV ++G G +GL +A+ +++ IIE GG
Sbjct: 8 DVTVIGGGPAGLYSAFY--SGLREMRTKIIEFHPHLGG 43
>5MOG-A nrPDB
Length = 497
Score = 30.6 bits (67), Expect = 0.87, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Query: 68 VIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG--GSW 107
V+I GAG +GLS A +A K ++E+ GG +W
Sbjct: 20 VVIAGAGLAGLSTAKYLA--DAGHKPILLEARDVLGGKIAAW 59
>4IV9-A nrPDB
Length = 557
Score = 30.6 bits (67), Expect = 0.87, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 68 VIIVGAGSSGLSAAYVIAKNRPDLK-VCIIESSVAPGGGSW 107
V IVGAG SGL AA + R +K V + ES GG W
Sbjct: 41 VAIVGAGISGLVAATEL--LRAGVKDVVLYESRDRIGGRVW 79
>1ZDL-A nrPDB
Length = 517
Score = 30.6 bits (67), Expect = 0.89, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIES-SVAPGGGSWLGG 110
D++++G GS GL+ A A+ KV + + +P G W G
Sbjct: 34 DLLVIGGGSGGLACAKEAAQL--GKKVAVADYVEPSPRGTKWGLG 76
>5BR7-A nrPDB
Length = 393
Score = 30.6 bits (67), Expect = 0.90, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRK-P 121
+ D+I+VG+G GL+ A A ++ KV I+E GG ++ + + + + K
Sbjct: 1 MSDFDLIVVGSGLFGLTVA-ERAASQLGKKVLIVEKRSHLGGNAYSEAEPETGIEIHKYG 59
Query: 122 AHLF 125
AHLF
Sbjct: 60 AHLF 63
>5UTH-A nrPDB
Length = 319
Score = 30.6 bits (67), Expect = 0.91, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 9/53 (16%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMR 119
DVII+G+G +G +AA A R LK + E G+ GG L + +
Sbjct: 17 DVIIIGSGPAGYTAAIYAA--RAQLKPLVFE-------GTQFGGALMTTTEVE 60
>1GPE-A nrPDB
Length = 587
Score = 30.6 bits (67), Expect = 1.0, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESS 99
D II G G +GL+ A + +N P +KV +IE
Sbjct: 26 DYIIAGGGLTGLTVAAKLTEN-PKIKVLVIEKG 57
>6DLL-A nrPDB
Length = 398
Score = 30.6 bits (67), Expect = 1.0, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 9/84 (10%)
Query: 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLF 125
+ V I+GAG SGL ++ K + I+E A ++ G++ A V+ +
Sbjct: 6 TQVAIIGAGPSGLLLGQLLHK--AGIDNIIVERQTA----EYVLGRI-RAGVLEQGTVDL 58
Query: 126 LQELEIPYEDEGDYVVVKHAALFI 149
L+E + E +V H + +
Sbjct: 59 LREAGVA-ERMDREGLV-HEGVEL 80
>4MOP-A nrPDB
Length = 633
Score = 30.6 bits (67), Expect = 1.0, Method: Composition-based stats.
Identities = 37/197 (18%), Positives = 67/197 (34%), Gaps = 11/197 (5%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFL 126
DV+IVG+G G + A + KV + + G +G + + +K F+
Sbjct: 48 DVVIVGSGPIGCTYARELV--GAGYKVAMFDIG-EIDSGLKIGAHKKNTVEYQKNIDKFV 104
Query: 127 QELEIPYEDEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVT- 185
++ V V L + T+ Q + N + E R + +
Sbjct: 105 NVIQGQLMS----VSVPVNTLVVDTLSPTSWQASTFFVRNGSNPEQDPLRNLSGQAVTRV 160
Query: 186 VAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFC 245
V G+ T+WT T + P +++ +D D TG D F
Sbjct: 161 VGGMSTHWTCATPRFDREQR--PLLVKDDADADDAEWDRLYTKAESYFQTGTD-QFKESI 217
Query: 246 AKRIVDIDQNQKLGGMK 262
+V ++ G +
Sbjct: 218 RHNLVLNKLTEEYKGQR 234
>4RPJ-A nrPDB
Length = 399
Score = 30.6 bits (67), Expect = 1.0, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRK-PA 122
A D+ +VG+G GL+ A +A D +V ++E GG ++ + + + + K A
Sbjct: 6 ARFDLFVVGSGFFGLTIAERVATQL-DKRVLVLERRPHIGGNAYSEAEPQTGIEVHKYGA 64
Query: 123 HLF 125
HLF
Sbjct: 65 HLF 67
>2A87-A nrPDB
Length = 335
Score = 30.6 bits (67), Expect = 1.1, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 52 MTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGG 105
MT+ D V DVI++G+G +G +AA A R L + E + GG
Sbjct: 1 MTAPPVHDRAHHPVRDVIVIGSGPAGYTAALYAA--RAQLAPLVFE-GTSFGGA 51
>1GAL-A nrPDB
Length = 583
Score = 30.2 bits (66), Expect = 1.2, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESS 99
D II G G +GL+ A + +N P++ V +IES
Sbjct: 20 VDYIIAGGGLTGLTTAARLTEN-PNISVLVIESG 52
>6BWT-A nrPDB
Length = 319
Score = 30.2 bits (66), Expect = 1.2, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
Query: 68 VIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104
+II+G+G +G +AA A R +LK II + + PGG
Sbjct: 10 LIILGSGPAGYTAAIYAA--RANLKPVII-TGMQPGG 43
>2IVE-A nrPDB
Length = 478
Score = 30.2 bits (66), Expect = 1.3, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFL 126
+V +VG G SGL+ A+ + D ++ESS GG +G + ++ + + FL
Sbjct: 18 NVAVVGGGISGLAVAHHLRSRGTD--AVLLESSARLGGA--VGTHALAGYLVEQGPNSFL 73
Query: 127 Q 127
Sbjct: 74 D 74
>4NTC-A nrPDB
Length = 335
Score = 30.2 bits (66), Expect = 1.4, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 66 SDVIIVGAGSSGLSAAYVIAKN 87
DV+I+GAG +GLS A +A+
Sbjct: 15 VDVLIIGAGPAGLSTATGLARQ 36
>3ABT-A nrPDB
Length = 662
Score = 30.2 bits (66), Expect = 1.4, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 68 VIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104
VII+G+G SGL+AA + + V ++E+ GG
Sbjct: 110 VIIIGSGVSGLAAARQL--QSFGMDVTLLEARDRVGG 144
>5L3D-A nrPDB
Length = 852
Score = 30.2 bits (66), Expect = 1.4, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 68 VIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104
VII+G+G SGL+AA + + V ++E+ GG
Sbjct: 281 VIIIGSGVSGLAAARQL--QSFGMDVTLLEARDRVGG 315
>3IC9-A nrPDB
Length = 492
Score = 30.2 bits (66), Expect = 1.4, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 8/48 (16%)
Query: 61 DKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWL 108
K DV I+G G++G+ AY AK D KV +IE GG++
Sbjct: 4 MKVINVDVAIIGTGTAGM-GAYRAAKKHTD-KVVLIE------GGAYG 43
>5I68-A nrPDB
Length = 663
Score = 29.8 bits (65), Expect = 1.5, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESS 99
D++++G GSSG A +A LKV +IE+
Sbjct: 6 EFDILVLGGGSSGSCIAGRLANLDHSLKVGLIEAG 40
>2IPI-A nrPDB
Length = 521
Score = 29.8 bits (65), Expect = 1.5, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 39/121 (32%), Gaps = 8/121 (6%)
Query: 2 SATSTATSTSASQLHLNSTPVTHCLSDIV-------KKEDWSDFKFAPIRESTVSRAMTS 54
SA T ++ S +LNS L DI + +DF A + E T
Sbjct: 280 SAAGTPYASMHSVFYLNSRAAGQILLDIQIDGGLDGAEALLNDFV-AAVNEGTGVEPAVQ 338
Query: 55 RYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFS 114
R + + +++ G S + K + + ++ W L+S
Sbjct: 339 RSTEPWLRATLANKFDTGGFDRTKSKGAYLRKPWTAAQAATLYRHLSADSQVWGEVSLYS 398
Query: 115 A 115
Sbjct: 399 Y 399
>3C4A-A nrPDB
Length = 381
Score = 29.8 bits (65), Expect = 1.6, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 68 VIIVGAGSSGLSAAYVIAKNRPDLKVCIIESS 99
++++GAG +GL A + + RP + I+E +
Sbjct: 3 ILVIGAGPAGLVFASQLKQARPLWAIDIVEKN 34
>5KXJ-A nrPDB
Length = 557
Score = 29.8 bits (65), Expect = 1.7, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAM 116
DV+I+G+G++GLS A +A+ KV ++ G ++ +A+
Sbjct: 10 DVLIIGSGAAGLSLALRLAEKH---KVIVLSKGPVSEGSTFYAQGGIAAV 56
>2QA2-A nrPDB
Length = 499
Score = 29.8 bits (65), Expect = 1.7, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMR 119
+ + VI+VGAG +GL A + + V ++E G S G F+A M
Sbjct: 11 SDASVIVVGAGPAGLMLAGEL--RLGGVDVMVLEQLPQRTGES--RGLGFTARTME 62
>1NAA-A nrPDB
Length = 541
Score = 29.8 bits (65), Expect = 1.9, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESS 99
D IIVGAG G+ AA +++ KV ++E
Sbjct: 4 DYIIVGAGPGGIIAADRLSE--AGKKVLLLERG 34
>4N9X-A nrPDB
Length = 411
Score = 29.4 bits (64), Expect = 2.0, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 3/65 (4%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFL 126
DV+I G G GL+ A + L++ ++E A + G + + L
Sbjct: 5 DVVIAGGGMVGLALACGL--QGSGLRIAVLEKQAAE-PQTLGKGHALRVSAINAASECLL 61
Query: 127 QELEI 131
+ + +
Sbjct: 62 RHIGV 66
>4K22-A nrPDB
Length = 365
Score = 29.4 bits (64), Expect = 2.0, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSV 100
DV IVG G GL+ A + L+V ++E V
Sbjct: 4 VDVAIVGGGMVGLAVACGL--QGSGLRVAVLEQRV 36
>5X6Z-C nrPDB
Length = 804
Score = 29.4 bits (64), Expect = 2.1, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 9 STSASQLHLNSTPVTHCLSDIVKKEDWSDFKFAPIRESTVSRAMTSR 55
STS + L++ + P TH LS ++ W+ F P S + AM
Sbjct: 281 STSMNILYIGAYPATHLLS--LQLNGWTILAFDPKITSDWTDAMAKA 325
>6GAS-A nrPDB
Length = 331
Score = 29.0 bits (63), Expect = 2.6, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104
D+ I+G G +GL A+ + +K IIES GG
Sbjct: 11 DITIIGGGPTGLFTAFYGGMRQASVK--IIESLPQLGG 46
>5ZBC-A nrPDB
Length = 451
Score = 29.0 bits (63), Expect = 2.7, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 66 SDVIIVGAGSSGLSAAYVI--AKNRPDLKVCIIESSVAPGG 104
SD+ IVGAG SGL+ A + + L + I + GG
Sbjct: 25 SDICIVGAGISGLTCASHLLDSPACRGLSLRIFDMQQEAGG 65
>1V59-A nrPDB
Length = 478
Score = 29.0 bits (63), Expect = 2.7, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104
DV+I+G G +G AA I + +E GG
Sbjct: 7 DVVIIGGGPAGYVAA--IKAAQLGFNTACVEKRGKLGG 42
>1E1N-A nrPDB
Length = 460
Score = 29.0 bits (63), Expect = 2.8, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 68 VIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104
+ +VG+G +G A + K+ V I E + P G
Sbjct: 9 ICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFG 45
>5Z70-A nrPDB
Length = 605
Score = 29.0 bits (63), Expect = 2.8, Method: Composition-based stats.
Identities = 11/43 (25%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 70 IVGAGSSGLSAAYVIAKN--RPDLKVCIIESSVAPGGGSWLGG 110
I+G+G +GL++A+ + ++ + I+++ PGG G
Sbjct: 9 IIGSGIAGLASAFYLIRDGRMKGQDITILDAVGTPGGSLDGSG 51
>5XGV-A nrPDB
Length = 462
Score = 29.0 bits (63), Expect = 2.9, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 68 VIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGG 110
VII G G GL A + + ++E AP S G
Sbjct: 4 VIIAGGGPVGLMLACELG--LAGVDTVVLERHDAPREPSRGGA 44
>6H3Z-A nrPDB
Length = 226
Score = 29.0 bits (63), Expect = 3.1, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 6 TATSTSASQLHLNSTPVTHCLSDIV 30
TA +TSA++ H N P H + DI+
Sbjct: 40 TAAATSATEEHFNELPRPHAVLDII 64
>1KNR-A nrPDB
Length = 540
Score = 29.0 bits (63), Expect = 3.3, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAM 116
DV+I+G+G++GLS A +A +V ++ G ++ +A+
Sbjct: 10 DVLIIGSGAAGLSLALRLADQH---QVIVLSKGPVTEGSTFYAQGGIAAV 56
>4EIQ-A nrPDB
Length = 549
Score = 28.6 bits (62), Expect = 3.6, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVC 94
+DV+I+G G G++ A +A + V
Sbjct: 25 IETDVLILGGGPVGMALALDLAHRQVGHLVV 55
>3LZX-A nrPDB
Length = 332
Score = 28.6 bits (62), Expect = 3.9, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Query: 59 DLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104
+ V D+ I+G G GL A+ + +K IIES GG
Sbjct: 1 MREDTKVYDITIIGGGPVGLFTAFYGGMRQASVK--IIESLPQLGG 44
>3II4-A nrPDB
Length = 466
Score = 28.6 bits (62), Expect = 4.0, Method: Composition-based stats.
Identities = 37/171 (21%), Positives = 62/171 (36%), Gaps = 33/171 (19%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFL 126
DV+++GAG G AA I + L I+E W G L + P+ L
Sbjct: 7 DVVVLGAGPGGYVAA--IRAAQLGLSTAIVEPKY------WGGVCLNVGCI---PSKALL 55
Query: 127 QELEIPYEDEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTV 186
+ E+ + I T +K + F+ D + E V
Sbjct: 56 RNAEL---------------VHIFTKDAKAFGISGEVTFDYGIAYD----RSRKVAEGRV 96
Query: 187 AGV--VTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTT 235
AGV + +T+ HG D N + L + GT ++ + +I + +
Sbjct: 97 AGVHFLMKKNKITEIHGYGTFADANTL-LVDLNDGGTESVTFDNAIIATGS 146
>4ZTK-A nrPDB
Length = 316
Score = 28.2 bits (61), Expect = 4.4, Method: Composition-based stats.
Identities = 19/117 (16%), Positives = 33/117 (28%), Gaps = 15/117 (12%)
Query: 192 NWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCAKRIVD 251
+W Q+ Q M G T + K IL+ GH G
Sbjct: 164 SWWQADQSDDLQLAM-----AALGENIPVTIESLIKSYAILANKGHSFDRGNSAIISETS 218
Query: 252 IDQNQKLGGMKGLDMNHAEHDVVIHSGAYAGVDNMYFAGMEVAELDGLNRMGPTFGA 308
+ + E+ V +G A + + AG ++ ++ F
Sbjct: 219 TNSINHM----------LENAVTNGTGKLAVIPGVSVAGKTGTVIENNDKYLALFAG 265
>1DOD-A nrPDB
Length = 394
Score = 28.2 bits (61), Expect = 4.5, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 9/85 (10%)
Query: 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLF 125
+ V I+GAG SGL ++ K + I+E ++ G++ A V+ +
Sbjct: 3 TQVAIIGAGPSGLLLGQLLHK--AGIDNVILERQTP----DYVLGRI-RAGVLEQGMVDL 55
Query: 126 LQELEIPYEDEGDYVVVKHAALFIS 150
L+E + D +V H + I+
Sbjct: 56 LREAGVDRRMARDGLV--HEGVEIA 78
>6AON-A nrPDB
Length = 478
Score = 28.2 bits (61), Expect = 5.1, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 10/49 (20%)
Query: 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSA 115
DV+++GAG G AA I + + V I+ +W GQ A
Sbjct: 9 DVVVIGAGPGGYIAA--IRAAQLGMSVACID--------AWQNGQGGPA 47
>1EBD-A nrPDB
Length = 455
Score = 28.2 bits (61), Expect = 5.3, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESS 99
++ ++VGAG G AA I + KV I+E
Sbjct: 2 IETETLVVGAGPGGYVAA--IRAAQLGQKVTIVEKG 35
>3WXM-B nrPDB
Length = 376
Score = 28.2 bits (61), Expect = 5.6, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 39/100 (39%), Gaps = 11/100 (11%)
Query: 41 APIRESTVSRAM---TSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIE 97
P RE V + + R ++ + +I G G S A + + P LKV ++
Sbjct: 184 DPSREQEVEKYVDRAAKRIVEEAARHRSPIAVIAGPGQLKTSVAEKVQRAMPSLKVATVD 243
Query: 98 SSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEG 137
+S+ G + R+ L+EL I E EG
Sbjct: 244 TSM-------GGVAGVREALRRESVTRILRELSI-VEAEG 275
>5U63-A nrPDB
Length = 321
Score = 27.5 bits (59), Expect = 7.5, Method: Composition-based stats.
Identities = 12/45 (26%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 60 LDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104
+ + ++I+G+G +G +AA A R +LK ++ + + GG
Sbjct: 4 MSDIKHAKLLILGSGPAGYTAAIYAA--RANLKPVLV-TGLQQGG 45
>1XDI-A nrPDB
Length = 499
Score = 27.5 bits (59), Expect = 8.3, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 65 VSDVIIVGAGSSGLSAAYVIAKNRPD-LKVCIIE 97
V+ ++I+G G +G AA V A + P+ +V +I+
Sbjct: 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVID 35
>3D8X-A nrPDB
Length = 326
Score = 27.5 bits (59), Expect = 9.2, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 68 VIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQL 112
V I+G+G + +AA +A R ++K + E +A G + GGQL
Sbjct: 13 VTIIGSGPAAHTAAIYLA--RAEIKPILYEGMMANGIAA--GGQL 53
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
Posted date: Jan 3, 2023 9:05 PM
Number of letters in database: 10,336,785
Number of sequences in database: 36,641
Lambda K H
0.310 0.122 0.314
Lambda K H
0.267 0.0374 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,273,272
Number of Sequences: 36641
Number of extensions: 426213
Number of successful extensions: 1749
Number of sequences better than 10.0: 188
Number of HSP's better than 10.0 without gapping: 117
Number of HSP's successfully gapped in prelim test: 164
Number of HSP's that attempted gapping in prelim test: 1568
Number of HSP's gapped (non-prelim): 313
length of query: 326
length of database: 10,336,785
effective HSP length: 97
effective length of query: 229
effective length of database: 6,782,608
effective search space: 1553217232
effective search space used: 1553217232
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 59 (27.5 bits)