BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P32288 (370 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3FKY-A nrPDB 774 0.0 2OJW-A nrPDB 419 e-118 2D3A-A nrPDB 417 e-117 4IS4-A nrPDB 414 e-116 4BAX-A nrPDB 348 2e-96 5ZLI-A nrPDB 69 3e-12 2GLS-A nrPDB 64 9e-11 4LNN-A nrPDB 62 5e-10 3NG0-A nrPDB 56 2e-08 3ZXV-A nrPDB 47 2e-05 4S17-A nrPDB 41 7e-04 3O6X-A nrPDB 35 0.061 4HPP-A nrPDB 32 0.30 4MJ2-A nrPDB 30 1.8 3BXO-A nrPDB 28 5.0 3ZY2-A nrPDB 28 6.8 1QVB-A nrPDB 28 8.0 >3FKY-A nrPDB Length = 370 Score = 774 bits (1999), Expect = 0.0, Method: Compositional matrix adjust. Identities = 368/370 (99%), Positives = 368/370 (99%) Query: 1 MAEASIEKTQILQKYLELDQRGRIIAEYVWIDGTGNLRSKGRTLKKRITSIDQLPEWNFD 60 MAEASIEKTQILQKYLELDQRGRIIAEYVWIDGTGNLRSKGRTLKKRITSIDQLPEWNFD Sbjct: 1 MAEASIEKTQILQKYLELDQRGRIIAEYVWIDGTGNLRSKGRTLKKRITSIDQLPEWNFD 60 Query: 61 GSSTNQAPGHDSDIYLKPVAYYPDPFRRGDNIVVLAACYNNDGTPNKFNHRHEAAKLFAA 120 GSSTNQAPGHDSDIYLKPVAYYPDPFRRGDNIVVLAACYNNDGTPNKFNHRHEAAKLFAA Sbjct: 61 GSSTNQAPGHDSDIYLKPVAYYPDPFRRGDNIVVLAACYNNDGTPNKFNHRHEAAKLFAA 120 Query: 121 HKDEEIWFGLEQEYTLFDMYDDVYGWPKGGYPAPQGPYYCGVGAGKVYARDMIEAHYRAC 180 HKDEEIWFGLEQEYTLFDMYDDVYGWPKGGYPAPQGPYYCGVGAGKVYARDMIEAHYRAC Sbjct: 121 HKDEEIWFGLEQEYTLFDMYDDVYGWPKGGYPAPQGPYYCGVGAGKVYARDMIEAHYRAC 180 Query: 181 LYAGLEISGINAEVMPSQWEFQVGPCTGIDMGDQLWMARYFLHRVAEEFGIKISFHPKPL 240 LYAGLEISGINAEVMPSQWEFQVGPCTGIDMGDQLWMARYFLHRVAEEFGIKISFHPKPL Sbjct: 181 LYAGLEISGINAEVMPSQWEFQVGPCTGIDMGDQLWMARYFLHRVAEEFGIKISFHPKPL 240 Query: 241 KGDWNGAGCHTNVSTKEMRQPGGMKYIEQAIEKLSKRHAEHIKLYGSDNDMRLTGRHETA 300 KGDWNGAGCH NVSTKEMRQPGG KYIEQAIEKLSKRHAEHIKLYGSDNDMRLTGRHETA Sbjct: 241 KGDWNGAGCHANVSTKEMRQPGGTKYIEQAIEKLSKRHAEHIKLYGSDNDMRLTGRHETA 300 Query: 301 SMTAFSSGVANRGSSIRIPRSVAKEGYGYFEDRRPASNIDPYLVTGIMCETVCGAIDNAD 360 SMTAFSSGVANRGSSIRIPRSVAKEGYGYFEDRRPASNIDPYLVTGIMCETVCGAIDNAD Sbjct: 301 SMTAFSSGVANRGSSIRIPRSVAKEGYGYFEDRRPASNIDPYLVTGIMCETVCGAIDNAD 360 Query: 361 MTKEFERESS 370 MTKEFERESS Sbjct: 361 MTKEFERESS 370 >2OJW-A nrPDB Length = 384 Score = 419 bits (1078), Expect = e-118, Method: Compositional matrix adjust. Identities = 198/357 (55%), Positives = 253/357 (70%), Gaps = 6/357 (1%) Query: 1 MAEASIEKTQILQKYLELDQRGRIIAEYVWIDGTGN-LRSKGRTLKKRITSIDQLPEWNF 59 MA + + K I Q Y+ L Q ++ A Y+WIDGTG LR K RTL +++LPEWNF Sbjct: 23 MASSHLNKG-IKQVYMSLPQGEKVQAMYIWIDGTGEGLRCKTRTLDSEPKCVEELPEWNF 81 Query: 60 DGSSTNQAPGHDSDIYLKPVAYYPDPFRRGDNIVVLAACYNNDGTPNKFNHRHEAAKLFA 119 DGSST Q+ G +SD+YL P A + DPFR+ N +VL + + P + N RH ++ Sbjct: 82 DGSSTLQSEGSNSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYNRRPAETNLRHTCKRIMD 141 Query: 120 AHKDEEIWFGLEQEYTLFDMYDDVYGWPKGGYPAPQGPYYCGVGAGKVYARDMIEAHYRA 179 ++ WFG+EQEYTL +GWP G+P PQGPYYCGVGA + Y RD++EAHYRA Sbjct: 142 MVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADRAYGRDIVEAHYRA 201 Query: 180 CLYAGLEISGINAEVMPSQWEFQVGPCTGIDMGDQLWMARYFLHRVAEEFGIKISFHPKP 239 CLYAG++I+G NAEVMP+QWEFQ+GPC GI MGD LW+AR+ LHRV E+FG+ +F PKP Sbjct: 202 CLYAGVKIAGTNAEVMPAQWEFQIGPCEGISMGDHLWVARFILHRVCEDFGVIATFDPKP 261 Query: 240 LKGDWNGAGCHTNVSTKEMRQPGGMKYIEQAIEKLSKRHAEHIKLY----GSDNDMRLTG 295 + G+WNGAGCHTN STK MR+ G+KYIE+AIEKLSKRH HI+ Y G DN RLTG Sbjct: 262 IPGNWNGAGCHTNFSTKAMREENGLKYIEEAIEKLSKRHQYHIRAYDPKGGLDNARRLTG 321 Query: 296 RHETASMTAFSSGVANRGSSIRIPRSVAKEGYGYFEDRRPASNIDPYLVTGIMCETV 352 HET+++ FS+GVANR +SIRIPR+V +E GYFEDRRP++N DP+ VT + T Sbjct: 322 FHETSNINDFSAGVANRSASIRIPRTVGQEKKGYFEDRRPSANCDPFSVTEALIRTC 378 >2D3A-A nrPDB Length = 356 Score = 417 bits (1072), Expect = e-117, Method: Compositional matrix adjust. Identities = 196/338 (57%), Positives = 247/338 (73%), Gaps = 4/338 (1%) Query: 19 DQRGRIIAEYVWIDGTG-NLRSKGRTLKKRITSIDQLPEWNFDGSSTNQAPGHDSDIYLK 77 D +IIAEY+WI G+G +LRSK RTL +T +LP+WN+DGSST QAPG DS++ L Sbjct: 14 DTTEKIIAEYIWIGGSGMDLRSKARTLPGPVTDPSKLPKWNYDGSSTGQAPGEDSEVILY 73 Query: 78 PVAYYPDPFRRGDNIVVLAACYNNDGTPNKFNHRHEAAKLFAAHK--DEEIWFGLEQEYT 135 P A + DPFRRG+NI+V+ CY G P N R+ AAK+F++ + EE W+G+EQEYT Sbjct: 74 PQAIFKDPFRRGNNILVMCDCYTPAGEPIPTNKRYSAAKIFSSPEVAAEEPWYGIEQEYT 133 Query: 136 LFDMYDD-VYGWPKGGYPAPQGPYYCGVGAGKVYARDMIEAHYRACLYAGLEISGINAEV 194 L + GWP GG+P PQGPYYCG+GA K + RD+++AHY+ACLYAG+ ISGIN EV Sbjct: 134 LLQKDTNWPLGWPIGGFPGPQGPYYCGIGAEKSFGRDIVDAHYKACLYAGINISGINGEV 193 Query: 195 MPSQWEFQVGPCTGIDMGDQLWMARYFLHRVAEEFGIKISFHPKPLKGDWNGAGCHTNVS 254 MP QWEFQVGP GI GDQ+W+ARY L R+ E G+ ++F PKP+ GDWNGAG HTN S Sbjct: 194 MPGQWEFQVGPSVGISSGDQVWVARYILERITEIAGVVVTFDPKPIPGDWNGAGAHTNYS 253 Query: 255 TKEMRQPGGMKYIEQAIEKLSKRHAEHIKLYGSDNDMRLTGRHETASMTAFSSGVANRGS 314 T+ MR+ GG + I+ AIEKL RH EHI YG N+ RLTGRHETA + FS GVANRG+ Sbjct: 254 TESMRKEGGYEVIKAAIEKLKLRHKEHIAAYGEGNERRLTGRHETADINTFSWGVANRGA 313 Query: 315 SIRIPRSVAKEGYGYFEDRRPASNIDPYLVTGIMCETV 352 S+R+ R + G GYFEDRRPASN+DPY+VT ++ ET Sbjct: 314 SVRVGRETEQNGKGYFEDRRPASNMDPYVVTSMIAETT 351 >4IS4-A nrPDB Length = 378 Score = 414 bits (1064), Expect = e-116, Method: Compositional matrix adjust. Identities = 195/336 (58%), Positives = 246/336 (73%), Gaps = 6/336 (1%) Query: 23 RIIAEYVWIDGTG-NLRSKGRTLKKRITSIDQLPEWNFDGSSTNQAPGHDSDIYLKPVAY 81 +IIAEY+W+ G+G +LRSK RTL ++ +LP+WN+DGSSTNQAPG DS++ L P A Sbjct: 40 KIIAEYIWVGGSGMDLRSKARTLPGPVSDPSKLPKWNYDGSSTNQAPGQDSEVILYPQAI 99 Query: 82 YPDPFRRGDNIVVLAACYNNDGTPNKFNHRHEAAKLFAAHKD---EEIWFGLEQEYTLFD 138 + DPFR+G+NI+V+ Y G P N R+ AAK+F+ H D E W+G+EQEYTL Sbjct: 100 FKDPFRQGNNILVICDVYTPAGEPLPTNKRYNAAKIFS-HPDVAAEVPWYGIEQEYTLLQ 158 Query: 139 MYDD-VYGWPKGGYPAPQGPYYCGVGAGKVYARDMIEAHYRACLYAGLEISGINAEVMPS 197 + GWP GGYP PQGPYYCG+GA K Y RD+++AHY+ACLYAG+ ISGIN EVMP Sbjct: 159 KDTNWPLGWPIGGYPGPQGPYYCGIGADKAYGRDIVDAHYKACLYAGINISGINGEVMPG 218 Query: 198 QWEFQVGPCTGIDMGDQLWMARYFLHRVAEEFGIKISFHPKPLKGDWNGAGCHTNVSTKE 257 QWEFQVGP GI GD++W ARY L R+ E G+ +SF PKP+ GDWNGAG HTN STK Sbjct: 219 QWEFQVGPSVGISAGDEIWAARYILERITEIAGVVVSFDPKPIPGDWNGAGAHTNYSTKS 278 Query: 258 MRQPGGMKYIEQAIEKLSKRHAEHIKLYGSDNDMRLTGRHETASMTAFSSGVANRGSSIR 317 MR+ GG + I++AIEKL RH EHI YG N+ RLTG+HETA + FS GVANRG+S+R Sbjct: 279 MRENGGYEIIKKAIEKLGLRHKEHIAAYGEGNERRLTGKHETADINTFSWGVANRGASVR 338 Query: 318 IPRSVAKEGYGYFEDRRPASNIDPYLVTGIMCETVC 353 + R K+G GYFEDRRP+SN+DPY+VT ++ ET Sbjct: 339 VGRDTEKDGKGYFEDRRPSSNMDPYVVTSMIAETTL 374 >4BAX-A nrPDB Length = 344 Score = 348 bits (893), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 175/339 (51%), Positives = 227/339 (66%), Gaps = 8/339 (2%) Query: 26 AEYVWIDGT---GNLRSKGRTLKKRITSIDQLPEWNFDGSSTNQAPGHDSDIYLKPVAYY 82 AEY+WIDGT LRSK + + +D LP W FDGSSTNQA G SD LKPV Sbjct: 6 AEYIWIDGTEPTAKLRSKTKIITAAPAGLDALPVWGFDGSSTNQAEGSSSDCVLKPVFSC 65 Query: 83 PDPFRRGDNIVVLAACYNNDGTPNKFNHRHEAAKLFAAHKDEEIWFGLEQEYTLFDMYDD 142 PDP R G++I+VL + D TP+ N R A+L +E FG+EQEYT F Sbjct: 66 PDPIRGGEDILVLCEVLDTDMTPHPSNTRAALAELSERFAAQEPVFGIEQEYTFFKGTRP 125 Query: 143 VYGWPKGGYPAPQGPYYCGVGAGKVYARDMIEAHYRACLYAGLEISGINAEVMPSQWEFQ 202 + G+P+GG+PA QG YYCGVG+ +++ RD++EAH CL AGL ISGINAEVMP QWEFQ Sbjct: 126 L-GFPEGGFPAAQGGYYCGVGSDEIFGRDVVEAHLENCLKAGLGISGINAEVMPGQWEFQ 184 Query: 203 VGPCTGIDMGDQLWMARYFLHRVAEEFGIKISFHPKPLKGDWNGAGCHTNVSTKEMRQPG 262 VGP +++ DQLW+AR+ L+R AE+F + + PKP+KGDWNGAG HTN STK MR+ Sbjct: 185 VGPLAPLEVSDQLWVARWLLYRTAEDFEVSATLDPKPVKGDWNGAGAHTNFSTKAMRE-- 242 Query: 263 GMKYIEQAIEKLSK--RHAEHIKLYGSDNDMRLTGRHETASMTAFSSGVANRGSSIRIPR 320 G I A E L + + +H+K YG+ D RLTG HETA +S GV++RG+S+RIP Sbjct: 243 GYDAIITAAESLGEGSKPMDHVKNYGAGIDDRLTGLHETAPWNEYSYGVSDRGASVRIPW 302 Query: 321 SVAKEGYGYFEDRRPASNIDPYLVTGIMCETVCGAIDNA 359 V K+G GY EDRRP +N+DPY+VT ++ +T C A++ A Sbjct: 303 QVEKDGKGYIEDRRPNANVDPYVVTRLLVDTCCTALEKA 341 >5ZLI-A nrPDB Length = 481 Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 88/313 (28%), Positives = 131/313 (41%), Gaps = 47/313 (15%) Query: 72 SDIYLKP--VAYYPDPFRRGDNIVVLAACYN-NDGTPNKFNHRHEAAKLFAAHKDEEI-- 126 SD+ L P V Y+ DPF ++VV Y+ P + R A K KD + Sbjct: 73 SDMILTPDLVRYFIDPFSADVSVVVFCDVYDVYKNQPYEKCPRSIAKKALQHLKDSGLGD 132 Query: 127 --WFGLEQEYTLFD----------MYDDV--------------YGWPKGGYPAPQGPYYC 160 +FG E E+ +FD Y +V G G P QG Y Sbjct: 133 VAYFGAENEFFIFDSIKIKDASNSQYYEVDSEEGEWNRDRSFENGVNFGHRPGKQGGYMP 192 Query: 161 GVGAGKVYARDMIEAHYRACLYAGLEISGINAEVMPSQWEFQVGPCTGIDMGDQLWMARY 220 + D+ + GLE ++ EV +Q E V ++ D + +Y Sbjct: 193 VPPTDTM--MDIRTEIVKVLNQVGLETFVVHHEVAQAQGEVGVKFGDLVEAADNVQKLKY 250 Query: 221 FLHRVAEEFGIKISFHPKPLKGDWNGAGCHTNVSTKEMRQP--GGMKY---IEQAIEKLS 275 + VA G +F PKPL GD NG+G HT+VS + + G Y E A+ L Sbjct: 251 VVKMVAHLNGKTATFMPKPLYGD-NGSGMHTHVSVWKNNENLFSGETYKGLSEFALHFLG 309 Query: 276 --KRHAEHIKLY---GSDNDMRLTGRHETASMTAFSSGVANRGSSIRIPRSVAKEGYGYF 330 RHA + + +++ RL +E S+ +S+ NR +S+RIP ++K F Sbjct: 310 GVLRHARGLAAFTNASTNSYKRLIPGYEAPSILTYSAN--NRSASVRIPYGISKNS-ARF 366 Query: 331 EDRRPASNIDPYL 343 E R P S+ +PYL Sbjct: 367 EFRFPDSSSNPYL 379 >2GLS-A nrPDB Length = 469 Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 95/343 (27%), Positives = 136/343 (39%), Gaps = 50/343 (14%) Query: 59 FDGSSTNQAPG-HDSDIYLKPVAYYP--DPFRRGDNIVVL------AACYNNDGTPNKFN 109 FDGSS G ++SD+ L P A DPF +++ D P Sbjct: 50 FDGSSIGGWKGINESDMVLMPDASTAVIDPFFADSTLIIRCDILEPGTLQGYDRDPRSIA 109 Query: 110 HRHEAAKLFAAHKDEEIWFGLEQEYTLFD-------------MYDDVYG-WP-------- 147 R E L A + + FG E E+ LFD DD+ G W Sbjct: 110 KRAED-YLRATGIADTVLFGPEPEFFLFDDIRFGASISGSHVAIDDIEGAWNSSTKYEGG 168 Query: 148 -KGGYPAPQGPYYCGVGAGKVYARDMIEAHYRACLYAGLEISGINAEVMPS-QWEFQVGP 205 KG P +G Y+ A+D+ GL + + EV + Q E Sbjct: 169 NKGHRPGVKGGYFPVPPVDS--AQDIRSEMCLVMEQMGLVVEAHHHEVATAGQNEVATRF 226 Query: 206 CTGIDMGDQLWMARYFLHRVAEEFGIKISFHPKPLKGDWNGAG--CHTNVSTKEMRQPGG 263 T D++ + +Y +H VA FG +F PKP+ GD NG+G CH +++ G Sbjct: 227 NTMTKKADEIQIYKYVVHNVAHRFGKTATFMPKPMFGD-NGSGMHCHMSLAKNGTNLFSG 285 Query: 264 MKYI---EQAIEKLSK--RHAEHIKLYG---SDNDMRLTGRHETASMTAFSSGVANRGSS 315 KY EQA+ + +HA+ I +++ RL +E M A+S+ NR +S Sbjct: 286 DKYAGLSEQALYYIGGVIKHAKAINALANPTTNSYKRLVPGYEAPVMLAYSA--RNRSAS 343 Query: 316 IRIPRSVAKEGYGYFEDRRPASNIDPYLVTGIMCETVCGAIDN 358 IRIP VA E R P +PYL + I N Sbjct: 344 IRIP-VVASPKARRIEVRFPDPAANPYLCFAALLMAGLDGIKN 385 >4LNN-A nrPDB Length = 443 Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 84/327 (25%), Positives = 126/327 (38%), Gaps = 45/327 (13%) Query: 59 FDGSSTNQ-APGHDSDIYLKP----VAYYPDPFRRGDNIVVLAACYNNDGTPNKFNHRHE 113 FDGSS +SD+YL P +P +G + YN DGTP + + R+ Sbjct: 51 FDGSSIEGFVRIEESDMYLYPDLNTFVIFPWTAEKGKVARFICDIYNPDGTPFEGDPRNN 110 Query: 114 AAKLFAAHKD---EEIWFGLEQEYTLFDMYDDVYGWP------KGGYPAPQGPYYCGVGA 164 ++ +D + G E E+ LF + D G P KGGY P G Sbjct: 111 LKRILKEMEDLGFSDFNLGPEPEFFLFKL--DEKGEPTLELNDKGGY-FDLAPTDLGENC 167 Query: 165 GKVYARDMIEAHYRACLYAGLEISGINAEVMPSQWEFQVGPCTGIDMGDQLWMARYFLHR 224 + ++ E G EI + EV P Q E + D + + + Sbjct: 168 RRDIVLELEEM--------GFEIEASHHEVAPGQHEIDFKYAGAVRSCDDIQTFKLVVKT 219 Query: 225 VAEEFGIKISFHPKPLKGDWNGAGCHTNVSTKEMRQPGGMKYIEQAIEKLSK-------- 276 +A + G+ +F PKPL G NG+G H N+S + + E A +LS+ Sbjct: 220 IARKHGLHATFMPKPLFG-VNGSGMHCNLSL--FKNGVNAFFDENADLQLSETAKHFIAG 276 Query: 277 --RHAEHIKLYGS---DNDMRLTGRHETASMTAFSSGVANRGSSIRIPRSVAKEGYGYFE 331 +HA + ++ RL +E A+S+ NR IRIP S Sbjct: 277 IVKHATSFTAVTNPTVNSYKRLVPGYEAPCYVAWSA--QNRSPLIRIPASRGISTRVEVR 334 Query: 332 DRRPASNIDPYLVTGIMCETVCGAIDN 358 PA+N PYL ++ I N Sbjct: 335 SVDPAAN--PYLALSVLLAAGLDGIKN 359 >3NG0-A nrPDB Length = 473 Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 16/159 (10%) Query: 209 IDMGDQLWMARYFLHRVAEEFGIKISFHPKPLKGDWNGAGCHTNVSTKEMRQP--GGMKY 266 ++ D L + +Y + VA+++G ++F PKP+ D NG+G H + S + QP G KY Sbjct: 232 VNSADNLMIYKYVIKNVAKKYGKTVTFMPKPIFND-NGSGMHVHQSLWKDGQPLFAGDKY 290 Query: 267 IEQAIEKL-----SKRHAEHIKLY---GSDNDMRLTGRHETASMTAFSSGVANRGSSIRI 318 + L +HA + + +++ RL E A+S G NR +S+RI Sbjct: 291 AGFSQMGLWYIGGILKHAPALLAFTNPTTNSYKRLVPGFEAPVNLAYSQG--NRSASVRI 348 Query: 319 PRSVAKEGYGYFEDRRPASNIDPYLVTGIMCETVCGAID 357 P S E R P + +PYL M +C ID Sbjct: 349 PLSGGNPKAKRLEFRCPDATSNPYLAFAAM---LCAGID 384 >3ZXV-A nrPDB Length = 486 Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 82/347 (23%), Positives = 128/347 (36%), Gaps = 53/347 (15%) Query: 59 FDGSSTNQAPG-HDSDIYL--KPVAYYPDPFRRGDNIVVLAACYNN-DGTPNKFNHRHEA 114 FDGSS H+SD+ L P DPFR + + ++ P + R+ A Sbjct: 61 FDGSSIRGFQSIHESDMLLLPDPETARIDPFRAAKTLNINFFVHDPFTLEPYSRDPRNIA 120 Query: 115 AK----LFAAHKDEEIWFGLEQEYTLFDMY-------------DDVYGW----------- 146 K L + + +FG E E+ +FD D + GW Sbjct: 121 RKAENYLISTGIADTAYFGAEAEFYIFDSVSFDSRANGSFYEVDAISGWWNTGAATEADG 180 Query: 147 -PKGGYPAPQGPYYCGVGAGKVYARDMIEAHYRACLYAGLEISGINAEVMPS-QWEFQVG 204 P GY Y V Y D+ + + +G + + EV Q E Sbjct: 181 SPNRGYKVRHKGGYFPVAPNDQYV-DLRDKMLTNLINSGFILEKGHHEVGSGGQAEINYQ 239 Query: 205 PCTGIDMGDQLWMARYFLHRVAEEFGIKISFHPKPLKGDWNGAGCHTNVSTKEMRQPGGM 264 + + D + + +Y + A + G ++F PKPL GD NG+G H + S + P + Sbjct: 240 FNSLLHAADDMQLYKYIIKNTAWQNGKTVTFMPKPLFGD-NGSGMHCHQSLWKDGAP--L 296 Query: 265 KYIEQAIEKLSK----------RHAEHIKLYGS---DNDMRLTGRHETASMTAFSSGVAN 311 Y E LS HA + + + ++ RL +E +S N Sbjct: 297 MYDETGYAGLSDTARHYIGGLLHHAPSLLAFTNPTVNSYKRLVPGYEAPINLVYSQ--RN 354 Query: 312 RGSSIRIPRSVAKEGYGYFEDRRPASNIDPYLVTGIMCETVCGAIDN 358 R + +RIP + + E R P S+ +PYL M I N Sbjct: 355 RSACVRIPITGSNPKAKRLEFRSPDSSGNPYLAFSAMLMAGLDGIKN 401 >4S17-A nrPDB Length = 481 Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 18/145 (12%) Query: 212 GDQLWMARYFLHRVAEEFGIKISFHPKPLKGDWNGAGCHTNVSTKEMRQPGGMKYIEQAI 271 GD L +Y +H A G +F PKP+ GD NG G H + S + +P + Y E+ Sbjct: 243 GDDLMKYKYVVHETAALAGKAATFMPKPIAGD-NGTGMHCHQSLWKDGKP--LFYDEKNY 299 Query: 272 EKLSK----------RHAEHIKLYGS---DNDMRLTGRHETASMTAFSSGVANRGSSIRI 318 LS +H+ + + + ++ RL E +S+ NR ++IRI Sbjct: 300 GGLSDLARWYIGGLIKHSSSVLAFTNPSLNSYHRLVPGFEAPVNLVYSA--RNRSAAIRI 357 Query: 319 PRSVAKEGYGYFEDRRPASNIDPYL 343 P + E R P + +P+L Sbjct: 358 PLAGTSPAAKRIEFRAPDPSCNPFL 382 >3O6X-A nrPDB Length = 729 Score = 34.7 bits (78), Expect = 0.061, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 9/77 (11%) Query: 180 CLYAGLEISGINAEVMPSQWEFQVGP----CTGIDMGDQLWMARYFLHRVAEEFGIKISF 235 C G+ + + EV P+Q F++ P C + +QL M + R+A + + F Sbjct: 273 CHKLGIPVKTRHNEVAPNQ--FELAPIFENCNLANDHNQLVMD--LMKRIARKHHFAVLF 328 Query: 236 HPKPLKGDWNGAGCHTN 252 H KP G NG+G H N Sbjct: 329 HEKPYNG-VNGSGKHNN 344 >4HPP-A nrPDB Length = 443 Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust. Identities = 29/133 (21%), Positives = 53/133 (39%), Gaps = 15/133 (11%) Query: 198 QWEFQVGPCTGIDMGDQLWMARYFLHRVAEEFGIKISFHPKPLKGDWNGAGCHTNVSTKE 257 Q+E P G+ D+ R VA + G++ F P P G G H ++S + Sbjct: 185 QYEVTCRPAQGVAAADRAVNVREVTREVARQMGLRTCFAPLPAPGAVTN-GVHLHLSLQH 243 Query: 258 ------MRQPGGMKYIEQAIEKLSKRHAEHIKLY------GSDNDMRLTGRHETASMTAF 305 + +PG + + E + H+ + + +RL H +A+ Sbjct: 244 ADGSPLLYEPGRPNDLSELGEHWAAGVLAHLPALCALTAPTAASYLRLKPHHWSAAYACL 303 Query: 306 SSGVANRGSSIRI 318 G+ NR +++RI Sbjct: 304 --GLRNREAALRI 314 >4MJ2-A nrPDB Length = 653 Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 7/115 (6%) Query: 79 VAYYPDPFRRGDNIVVLAACYNNDGTPNKFNHRHE---AAKLFAAHKDEEIWFGLEQEYT 135 ++Y+P PF + NN P+ R A L A +E++W + Q T Sbjct: 353 LSYHPHPF--AQRTLTARFQVNNTRPPHVQLLRKPVLTAMGLLALLDEEQLWAEVSQAGT 410 Query: 136 LFDMYDDVYGWPKGGYPAPQGPYYCGVGAGKVYARDMIEAHYRACLYAGLEISGI 190 + D V G + PQGP A +YA D AH + L + G+ Sbjct: 411 VLDSNHTV-GVLASAH-RPQGPADAWRAAVLIYASDDTRAHPNRSVAVTLRLRGV 463 >3BXO-A nrPDB Length = 239 Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%) Query: 246 GAGCHTNVSTKEMRQPGGMKYIEQAIEKLSKRHAEHIKLYGSDNDMRLTGRHETASMTAF 305 G G H TKE G++ E + KR + G D RL GR +A ++ F Sbjct: 50 GTGTHLEHFTKEFGDTAGLELSEDMLTHARKRLPDATLHQGDMRDFRL-GRKFSAVVSMF 108 Query: 306 SS 307 SS Sbjct: 109 SS 110 >3ZY2-A nrPDB Length = 362 Score = 28.1 bits (61), Expect = 6.8, Method: Compositional matrix adjust. Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%) Query: 246 GAGCHTNVSTKEMRQPGGMKYIEQAIEKLSKRHAEHIKLYGSDND 290 G G H TKE+ P + +EQ +EK+ A+ + SD D Sbjct: 247 GEGHHLGTLTKEICSPSKQQILEQIVEKVGSIGAKSV-FVASDKD 290 >1QVB-A nrPDB Length = 481 Score = 27.7 bits (60), Expect = 8.0, Method: Compositional matrix adjust. Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 4/41 (9%) Query: 139 MYDDVYGWPKGGYPAPQGPYYCGVGAGKVYARDMIEAHYRA 179 +Y+ Y + KGG+P P Y + A R+MI+AH RA Sbjct: 212 VYEQGYMFVKGGFP----PGYLSLEAADKARRNMIQAHARA 248 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3FKY-A nrPDB 602 e-173 2OJW-A nrPDB 525 e-149 2D3A-A nrPDB 494 e-140 4IS4-A nrPDB 492 e-139 4BAX-A nrPDB 448 e-126 3ZXV-A nrPDB 328 3e-90 5ZLI-A nrPDB 326 1e-89 2GLS-A nrPDB 325 3e-89 4LNN-A nrPDB 311 3e-85 3NG0-A nrPDB 294 4e-80 4S17-A nrPDB 282 2e-76 Sequences not found previously or not previously below threshold: 5DM3-A nrPDB 110 8e-25 4HPP-A nrPDB 89 3e-18 3O6X-A nrPDB 57 1e-08 6AA7-A nrPDB 32 0.30 2J9I-A nrPDB 32 0.51 5Y8R-A nrPDB 32 0.57 1U1Z-A nrPDB 32 0.60 5LZ5-A nrPDB 30 1.1 2PXS-A nrPDB 30 1.3 2FL1-A nrPDB 30 1.4 6MDP-A nrPDB 29 3.1 3CKC-A nrPDB 28 6.0 >3FKY-A nrPDB Length = 370 Score = 602 bits (1553), Expect = e-173, Method: Composition-based stats. Identities = 368/370 (99%), Positives = 368/370 (99%) Query: 1 MAEASIEKTQILQKYLELDQRGRIIAEYVWIDGTGNLRSKGRTLKKRITSIDQLPEWNFD 60 MAEASIEKTQILQKYLELDQRGRIIAEYVWIDGTGNLRSKGRTLKKRITSIDQLPEWNFD Sbjct: 1 MAEASIEKTQILQKYLELDQRGRIIAEYVWIDGTGNLRSKGRTLKKRITSIDQLPEWNFD 60 Query: 61 GSSTNQAPGHDSDIYLKPVAYYPDPFRRGDNIVVLAACYNNDGTPNKFNHRHEAAKLFAA 120 GSSTNQAPGHDSDIYLKPVAYYPDPFRRGDNIVVLAACYNNDGTPNKFNHRHEAAKLFAA Sbjct: 61 GSSTNQAPGHDSDIYLKPVAYYPDPFRRGDNIVVLAACYNNDGTPNKFNHRHEAAKLFAA 120 Query: 121 HKDEEIWFGLEQEYTLFDMYDDVYGWPKGGYPAPQGPYYCGVGAGKVYARDMIEAHYRAC 180 HKDEEIWFGLEQEYTLFDMYDDVYGWPKGGYPAPQGPYYCGVGAGKVYARDMIEAHYRAC Sbjct: 121 HKDEEIWFGLEQEYTLFDMYDDVYGWPKGGYPAPQGPYYCGVGAGKVYARDMIEAHYRAC 180 Query: 181 LYAGLEISGINAEVMPSQWEFQVGPCTGIDMGDQLWMARYFLHRVAEEFGIKISFHPKPL 240 LYAGLEISGINAEVMPSQWEFQVGPCTGIDMGDQLWMARYFLHRVAEEFGIKISFHPKPL Sbjct: 181 LYAGLEISGINAEVMPSQWEFQVGPCTGIDMGDQLWMARYFLHRVAEEFGIKISFHPKPL 240 Query: 241 KGDWNGAGCHTNVSTKEMRQPGGMKYIEQAIEKLSKRHAEHIKLYGSDNDMRLTGRHETA 300 KGDWNGAGCH NVSTKEMRQPGG KYIEQAIEKLSKRHAEHIKLYGSDNDMRLTGRHETA Sbjct: 241 KGDWNGAGCHANVSTKEMRQPGGTKYIEQAIEKLSKRHAEHIKLYGSDNDMRLTGRHETA 300 Query: 301 SMTAFSSGVANRGSSIRIPRSVAKEGYGYFEDRRPASNIDPYLVTGIMCETVCGAIDNAD 360 SMTAFSSGVANRGSSIRIPRSVAKEGYGYFEDRRPASNIDPYLVTGIMCETVCGAIDNAD Sbjct: 301 SMTAFSSGVANRGSSIRIPRSVAKEGYGYFEDRRPASNIDPYLVTGIMCETVCGAIDNAD 360 Query: 361 MTKEFERESS 370 MTKEFERESS Sbjct: 361 MTKEFERESS 370 >2OJW-A nrPDB Length = 384 Score = 525 bits (1352), Expect = e-149, Method: Composition-based stats. Identities = 198/358 (55%), Positives = 253/358 (70%), Gaps = 6/358 (1%) Query: 1 MAEASIEKTQILQKYLELDQRGRIIAEYVWIDGTGN-LRSKGRTLKKRITSIDQLPEWNF 59 MA + + K I Q Y+ L Q ++ A Y+WIDGTG LR K RTL +++LPEWNF Sbjct: 23 MASSHLNKG-IKQVYMSLPQGEKVQAMYIWIDGTGEGLRCKTRTLDSEPKCVEELPEWNF 81 Query: 60 DGSSTNQAPGHDSDIYLKPVAYYPDPFRRGDNIVVLAACYNNDGTPNKFNHRHEAAKLFA 119 DGSST Q+ G +SD+YL P A + DPFR+ N +VL + + P + N RH ++ Sbjct: 82 DGSSTLQSEGSNSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYNRRPAETNLRHTCKRIMD 141 Query: 120 AHKDEEIWFGLEQEYTLFDMYDDVYGWPKGGYPAPQGPYYCGVGAGKVYARDMIEAHYRA 179 ++ WFG+EQEYTL +GWP G+P PQGPYYCGVGA + Y RD++EAHYRA Sbjct: 142 MVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADRAYGRDIVEAHYRA 201 Query: 180 CLYAGLEISGINAEVMPSQWEFQVGPCTGIDMGDQLWMARYFLHRVAEEFGIKISFHPKP 239 CLYAG++I+G NAEVMP+QWEFQ+GPC GI MGD LW+AR+ LHRV E+FG+ +F PKP Sbjct: 202 CLYAGVKIAGTNAEVMPAQWEFQIGPCEGISMGDHLWVARFILHRVCEDFGVIATFDPKP 261 Query: 240 LKGDWNGAGCHTNVSTKEMRQPGGMKYIEQAIEKLSKRHAEHIKLY----GSDNDMRLTG 295 + G+WNGAGCHTN STK MR+ G+KYIE+AIEKLSKRH HI+ Y G DN RLTG Sbjct: 262 IPGNWNGAGCHTNFSTKAMREENGLKYIEEAIEKLSKRHQYHIRAYDPKGGLDNARRLTG 321 Query: 296 RHETASMTAFSSGVANRGSSIRIPRSVAKEGYGYFEDRRPASNIDPYLVTGIMCETVC 353 HET+++ FS+GVANR +SIRIPR+V +E GYFEDRRP++N DP+ VT + T Sbjct: 322 FHETSNINDFSAGVANRSASIRIPRTVGQEKKGYFEDRRPSANCDPFSVTEALIRTCL 379 >2D3A-A nrPDB Length = 356 Score = 494 bits (1271), Expect = e-140, Method: Composition-based stats. Identities = 196/339 (57%), Positives = 247/339 (72%), Gaps = 4/339 (1%) Query: 19 DQRGRIIAEYVWIDGTG-NLRSKGRTLKKRITSIDQLPEWNFDGSSTNQAPGHDSDIYLK 77 D +IIAEY+WI G+G +LRSK RTL +T +LP+WN+DGSST QAPG DS++ L Sbjct: 14 DTTEKIIAEYIWIGGSGMDLRSKARTLPGPVTDPSKLPKWNYDGSSTGQAPGEDSEVILY 73 Query: 78 PVAYYPDPFRRGDNIVVLAACYNNDGTPNKFNHRHEAAKLFAAHK--DEEIWFGLEQEYT 135 P A + DPFRRG+NI+V+ CY G P N R+ AAK+F++ + EE W+G+EQEYT Sbjct: 74 PQAIFKDPFRRGNNILVMCDCYTPAGEPIPTNKRYSAAKIFSSPEVAAEEPWYGIEQEYT 133 Query: 136 LFDMYDD-VYGWPKGGYPAPQGPYYCGVGAGKVYARDMIEAHYRACLYAGLEISGINAEV 194 L + GWP GG+P PQGPYYCG+GA K + RD+++AHY+ACLYAG+ ISGIN EV Sbjct: 134 LLQKDTNWPLGWPIGGFPGPQGPYYCGIGAEKSFGRDIVDAHYKACLYAGINISGINGEV 193 Query: 195 MPSQWEFQVGPCTGIDMGDQLWMARYFLHRVAEEFGIKISFHPKPLKGDWNGAGCHTNVS 254 MP QWEFQVGP GI GDQ+W+ARY L R+ E G+ ++F PKP+ GDWNGAG HTN S Sbjct: 194 MPGQWEFQVGPSVGISSGDQVWVARYILERITEIAGVVVTFDPKPIPGDWNGAGAHTNYS 253 Query: 255 TKEMRQPGGMKYIEQAIEKLSKRHAEHIKLYGSDNDMRLTGRHETASMTAFSSGVANRGS 314 T+ MR+ GG + I+ AIEKL RH EHI YG N+ RLTGRHETA + FS GVANRG+ Sbjct: 254 TESMRKEGGYEVIKAAIEKLKLRHKEHIAAYGEGNERRLTGRHETADINTFSWGVANRGA 313 Query: 315 SIRIPRSVAKEGYGYFEDRRPASNIDPYLVTGIMCETVC 353 S+R+ R + G GYFEDRRPASN+DPY+VT ++ ET Sbjct: 314 SVRVGRETEQNGKGYFEDRRPASNMDPYVVTSMIAETTI 352 >4IS4-A nrPDB Length = 378 Score = 492 bits (1266), Expect = e-139, Method: Composition-based stats. Identities = 193/339 (56%), Positives = 245/339 (72%), Gaps = 4/339 (1%) Query: 19 DQRGRIIAEYVWIDGTG-NLRSKGRTLKKRITSIDQLPEWNFDGSSTNQAPGHDSDIYLK 77 + +IIAEY+W+ G+G +LRSK RTL ++ +LP+WN+DGSSTNQAPG DS++ L Sbjct: 36 ESSEKIIAEYIWVGGSGMDLRSKARTLPGPVSDPSKLPKWNYDGSSTNQAPGQDSEVILY 95 Query: 78 PVAYYPDPFRRGDNIVVLAACYNNDGTPNKFNHRHEAAKLFAAH--KDEEIWFGLEQEYT 135 P A + DPFR+G+NI+V+ Y G P N R+ AAK+F+ E W+G+EQEYT Sbjct: 96 PQAIFKDPFRQGNNILVICDVYTPAGEPLPTNKRYNAAKIFSHPDVAAEVPWYGIEQEYT 155 Query: 136 LFDMYDD-VYGWPKGGYPAPQGPYYCGVGAGKVYARDMIEAHYRACLYAGLEISGINAEV 194 L + GWP GGYP PQGPYYCG+GA K Y RD+++AHY+ACLYAG+ ISGIN EV Sbjct: 156 LLQKDTNWPLGWPIGGYPGPQGPYYCGIGADKAYGRDIVDAHYKACLYAGINISGINGEV 215 Query: 195 MPSQWEFQVGPCTGIDMGDQLWMARYFLHRVAEEFGIKISFHPKPLKGDWNGAGCHTNVS 254 MP QWEFQVGP GI GD++W ARY L R+ E G+ +SF PKP+ GDWNGAG HTN S Sbjct: 216 MPGQWEFQVGPSVGISAGDEIWAARYILERITEIAGVVVSFDPKPIPGDWNGAGAHTNYS 275 Query: 255 TKEMRQPGGMKYIEQAIEKLSKRHAEHIKLYGSDNDMRLTGRHETASMTAFSSGVANRGS 314 TK MR+ GG + I++AIEKL RH EHI YG N+ RLTG+HETA + FS GVANRG+ Sbjct: 276 TKSMRENGGYEIIKKAIEKLGLRHKEHIAAYGEGNERRLTGKHETADINTFSWGVANRGA 335 Query: 315 SIRIPRSVAKEGYGYFEDRRPASNIDPYLVTGIMCETVC 353 S+R+ R K+G GYFEDRRP+SN+DPY+VT ++ ET Sbjct: 336 SVRVGRDTEKDGKGYFEDRRPSSNMDPYVVTSMIAETTL 374 >4BAX-A nrPDB Length = 344 Score = 448 bits (1153), Expect = e-126, Method: Composition-based stats. Identities = 175/339 (51%), Positives = 226/339 (66%), Gaps = 8/339 (2%) Query: 26 AEYVWIDGT---GNLRSKGRTLKKRITSIDQLPEWNFDGSSTNQAPGHDSDIYLKPVAYY 82 AEY+WIDGT LRSK + + +D LP W FDGSSTNQA G SD LKPV Sbjct: 6 AEYIWIDGTEPTAKLRSKTKIITAAPAGLDALPVWGFDGSSTNQAEGSSSDCVLKPVFSC 65 Query: 83 PDPFRRGDNIVVLAACYNNDGTPNKFNHRHEAAKLFAAHKDEEIWFGLEQEYTLFDMYDD 142 PDP R G++I+VL + D TP+ N R A+L +E FG+EQEYT F Sbjct: 66 PDPIRGGEDILVLCEVLDTDMTPHPSNTRAALAELSERFAAQEPVFGIEQEYTFFKGTR- 124 Query: 143 VYGWPKGGYPAPQGPYYCGVGAGKVYARDMIEAHYRACLYAGLEISGINAEVMPSQWEFQ 202 G+P+GG+PA QG YYCGVG+ +++ RD++EAH CL AGL ISGINAEVMP QWEFQ Sbjct: 125 PLGFPEGGFPAAQGGYYCGVGSDEIFGRDVVEAHLENCLKAGLGISGINAEVMPGQWEFQ 184 Query: 203 VGPCTGIDMGDQLWMARYFLHRVAEEFGIKISFHPKPLKGDWNGAGCHTNVSTKEMRQPG 262 VGP +++ DQLW+AR+ L+R AE+F + + PKP+KGDWNGAG HTN STK MR+ Sbjct: 185 VGPLAPLEVSDQLWVARWLLYRTAEDFEVSATLDPKPVKGDWNGAGAHTNFSTKAMRE-- 242 Query: 263 GMKYIEQAIEKLSK--RHAEHIKLYGSDNDMRLTGRHETASMTAFSSGVANRGSSIRIPR 320 G I A E L + + +H+K YG+ D RLTG HETA +S GV++RG+S+RIP Sbjct: 243 GYDAIITAAESLGEGSKPMDHVKNYGAGIDDRLTGLHETAPWNEYSYGVSDRGASVRIPW 302 Query: 321 SVAKEGYGYFEDRRPASNIDPYLVTGIMCETVCGAIDNA 359 V K+G GY EDRRP +N+DPY+VT ++ +T C A++ A Sbjct: 303 QVEKDGKGYIEDRRPNANVDPYVVTRLLVDTCCTALEKA 341 >3ZXV-A nrPDB Length = 486 Score = 328 bits (840), Expect = 3e-90, Method: Composition-based stats. Identities = 82/347 (23%), Positives = 128/347 (36%), Gaps = 53/347 (15%) Query: 59 FDGSSTNQAPG-HDSDIYL--KPVAYYPDPFRRGDNIVVLAACYNN-DGTPNKFNHRHEA 114 FDGSS H+SD+ L P DPFR + + ++ P + R+ A Sbjct: 61 FDGSSIRGFQSIHESDMLLLPDPETARIDPFRAAKTLNINFFVHDPFTLEPYSRDPRNIA 120 Query: 115 AK----LFAAHKDEEIWFGLEQEYTLFDMY-------------DDVYGW----------- 146 K L + + +FG E E+ +FD D + GW Sbjct: 121 RKAENYLISTGIADTAYFGAEAEFYIFDSVSFDSRANGSFYEVDAISGWWNTGAATEADG 180 Query: 147 -PKGGYPAPQGPYYCGVGAGKVYARDMIEAHYRACLYAGLEISGINAEVMPS-QWEFQVG 204 P GY Y V Y D+ + + +G + + EV Q E Sbjct: 181 SPNRGYKVRHKGGYFPVAPNDQYV-DLRDKMLTNLINSGFILEKGHHEVGSGGQAEINYQ 239 Query: 205 PCTGIDMGDQLWMARYFLHRVAEEFGIKISFHPKPLKGDWNGAGCHTNVSTKEMRQPGGM 264 + + D + + +Y + A + G ++F PKPL GD NG+G H + S + P + Sbjct: 240 FNSLLHAADDMQLYKYIIKNTAWQNGKTVTFMPKPLFGD-NGSGMHCHQSLWKDGAP--L 296 Query: 265 KYIEQAIEKLSK----------RHAEHIKLYGS---DNDMRLTGRHETASMTAFSSGVAN 311 Y E LS HA + + + ++ RL +E +S N Sbjct: 297 MYDETGYAGLSDTARHYIGGLLHHAPSLLAFTNPTVNSYKRLVPGYEAPINLVYSQ--RN 354 Query: 312 RGSSIRIPRSVAKEGYGYFEDRRPASNIDPYLVTGIMCETVCGAIDN 358 R + +RIP + + E R P S+ +PYL M I N Sbjct: 355 RSACVRIPITGSNPKAKRLEFRSPDSSGNPYLAFSAMLMAGLDGIKN 401 >5ZLI-A nrPDB Length = 481 Score = 326 bits (835), Expect = 1e-89, Method: Composition-based stats. Identities = 93/342 (27%), Positives = 138/342 (40%), Gaps = 48/342 (14%) Query: 59 FDGSSTNQAPG-HDSDIYLKP--VAYYPDPFRRGDNIVVLAACYN-NDGTPNKFNHRHEA 114 FD S G SD+ L P V Y+ DPF ++VV Y+ P + R A Sbjct: 59 FDASCFKGWQGIEHSDMILTPDLVRYFIDPFSADVSVVVFCDVYDVYKNQPYEKCPRSIA 118 Query: 115 AKLFAAHKDEEI----WFGLEQEYTLFD----------MYDDV--------------YGW 146 K KD + +FG E E+ +FD Y +V G Sbjct: 119 KKALQHLKDSGLGDVAYFGAENEFFIFDSIKIKDASNSQYYEVDSEEGEWNRDRSFENGV 178 Query: 147 PKGGYPAPQGPYYCGVGAGKVYARDMIEAHYRACLYAGLEISGINAEVMPSQWEFQVGPC 206 G P QG Y + D+ + GLE ++ EV +Q E V Sbjct: 179 NFGHRPGKQGGYMPVPPTDTM--MDIRTEIVKVLNQVGLETFVVHHEVAQAQGEVGVKFG 236 Query: 207 TGIDMGDQLWMARYFLHRVAEEFGIKISFHPKPLKGDWNGAGCHTNVSTKEMRQP--GGM 264 ++ D + +Y + VA G +F PKPL GD NG+G HT+VS + + G Sbjct: 237 DLVEAADNVQKLKYVVKMVAHLNGKTATFMPKPLYGD-NGSGMHTHVSVWKNNENLFSGE 295 Query: 265 KY---IEQAIEKLS--KRHAEHIKLYGS---DNDMRLTGRHETASMTAFSSGVANRGSSI 316 Y E A+ L RHA + + + ++ RL +E S+ +S+ NR +S+ Sbjct: 296 TYKGLSEFALHFLGGVLRHARGLAAFTNASTNSYKRLIPGYEAPSILTYSAN--NRSASV 353 Query: 317 RIPRSVAKEGYGYFEDRRPASNIDPYLVTGIMCETVCGAIDN 358 RIP ++K FE R P S+ +PYL + + N Sbjct: 354 RIPYGISKNSA-RFEFRFPDSSSNPYLAFAAILMAGMDGVKN 394 >2GLS-A nrPDB Length = 469 Score = 325 bits (832), Expect = 3e-89, Method: Composition-based stats. Identities = 95/343 (27%), Positives = 135/343 (39%), Gaps = 50/343 (14%) Query: 59 FDGSSTNQAPG-HDSDIYLKPVAYY--PDPFRRGDNIVVLAAC------YNNDGTPNKFN 109 FDGSS G ++SD+ L P A DPF +++ D P Sbjct: 50 FDGSSIGGWKGINESDMVLMPDASTAVIDPFFADSTLIIRCDILEPGTLQGYDRDPRSIA 109 Query: 110 HRHEAAKLFAAHKDEEIWFGLEQEYTLFD-------------MYDDVYG-WP-------- 147 R E L A + + FG E E+ LFD DD+ G W Sbjct: 110 KRAED-YLRATGIADTVLFGPEPEFFLFDDIRFGASISGSHVAIDDIEGAWNSSTKYEGG 168 Query: 148 -KGGYPAPQGPYYCGVGAGKVYARDMIEAHYRACLYAGLEISGINAEVMP-SQWEFQVGP 205 KG P +G Y+ A+D+ GL + + EV Q E Sbjct: 169 NKGHRPGVKGGYFPVPPVDS--AQDIRSEMCLVMEQMGLVVEAHHHEVATAGQNEVATRF 226 Query: 206 CTGIDMGDQLWMARYFLHRVAEEFGIKISFHPKPLKGDWNGAGCHTNVSTKEMRQP--GG 263 T D++ + +Y +H VA FG +F PKP+ GD NG+G H ++S + G Sbjct: 227 NTMTKKADEIQIYKYVVHNVAHRFGKTATFMPKPMFGD-NGSGMHCHMSLAKNGTNLFSG 285 Query: 264 MKYI---EQAIEKLSK--RHAEHIKLY---GSDNDMRLTGRHETASMTAFSSGVANRGSS 315 KY EQA+ + +HA+ I +++ RL +E M A+S+ NR +S Sbjct: 286 DKYAGLSEQALYYIGGVIKHAKAINALANPTTNSYKRLVPGYEAPVMLAYSA--RNRSAS 343 Query: 316 IRIPRSVAKEGYGYFEDRRPASNIDPYLVTGIMCETVCGAIDN 358 IRIP VA E R P +PYL + I N Sbjct: 344 IRIP-VVASPKARRIEVRFPDPAANPYLCFAALLMAGLDGIKN 385 >4LNN-A nrPDB Length = 443 Score = 311 bits (797), Expect = 3e-85, Method: Composition-based stats. Identities = 83/327 (25%), Positives = 125/327 (38%), Gaps = 45/327 (13%) Query: 59 FDGSSTNQA-PGHDSDIYLKP----VAYYPDPFRRGDNIVVLAACYNNDGTPNKFNHRHE 113 FDGSS +SD+YL P +P +G + YN DGTP + + R+ Sbjct: 51 FDGSSIEGFVRIEESDMYLYPDLNTFVIFPWTAEKGKVARFICDIYNPDGTPFEGDPRNN 110 Query: 114 AAKLFAAHKD---EEIWFGLEQEYTLFDMYDDVYGWP------KGGYPAPQGPYYCGVGA 164 ++ +D + G E E+ LF + D G P KGGY P G Sbjct: 111 LKRILKEMEDLGFSDFNLGPEPEFFLFKL--DEKGEPTLELNDKGGY-FDLAPTDLGENC 167 Query: 165 GKVYARDMIEAHYRACLYAGLEISGINAEVMPSQWEFQVGPCTGIDMGDQLWMARYFLHR 224 + ++ E G EI + EV P Q E + D + + + Sbjct: 168 RRDIVLELEEM--------GFEIEASHHEVAPGQHEIDFKYAGAVRSCDDIQTFKLVVKT 219 Query: 225 VAEEFGIKISFHPKPLKGDWNGAGCHTNVSTKEMRQPGGMKYIEQAIEKLSK-------- 276 +A + G+ +F PKPL G NG+G H N+S + + E A +LS+ Sbjct: 220 IARKHGLHATFMPKPLFG-VNGSGMHCNLSL--FKNGVNAFFDENADLQLSETAKHFIAG 276 Query: 277 --RHAEHIKLYGS---DNDMRLTGRHETASMTAFSSGVANRGSSIRIPRSVAKEGYGYFE 331 +HA + ++ RL +E A+S+ NR IRIP S E Sbjct: 277 IVKHATSFTAVTNPTVNSYKRLVPGYEAPCYVAWSA--QNRSPLIRIPASRGIST--RVE 332 Query: 332 DRRPASNIDPYLVTGIMCETVCGAIDN 358 R +PYL ++ I N Sbjct: 333 VRSVDPAANPYLALSVLLAAGLDGIKN 359 >3NG0-A nrPDB Length = 473 Score = 294 bits (753), Expect = 4e-80, Method: Composition-based stats. Identities = 82/342 (23%), Positives = 130/342 (38%), Gaps = 47/342 (13%) Query: 59 FDGSSTNQAP-GHDSDIYLKPV--AYYPDPFRRGDNIVVLAACYNN-DGTPNKFNHRHEA 114 FDGSS ++SD+ + P DPF + + ++ + G + R A Sbjct: 52 FDGSSIRGWKAINESDMCMVPDPNTATIDPFCKEPTLSMICSIKEPRTGEWYNRDPRTIA 111 Query: 115 AK----LFAAHKDEEIWFGLEQEYTLFDMYD-----------------------DVYGWP 147 AK L + ++FG E E+ LFD + G Sbjct: 112 AKAAEYLRGTGIADTVYFGPEAEFFLFDDIRFGQTENSSYYFADSVEGRWNTGREEEGGN 171 Query: 148 KGGYPAPQGPYYCGVGAGKVYARDMIEAHYRACLYAGLEISGINAEVMPS-QWEFQVGPC 206 G P + Y+ A+D+ G+ I + EV Q E + Sbjct: 172 LGYKPGYKQGYFPVAPTDT--AQDIRTEMLLTMAAFGVPIEKHHHEVASGGQNELGIKFD 229 Query: 207 TGIDMGDQLWMARYFLHRVAEEFGIKISFHPKPLKGDWNGAGCHTNVSTKEMRQP--GGM 264 ++ D L + +Y + VA+++G ++F PKP+ D NG+G H + S + QP G Sbjct: 230 KLVNSADNLMIYKYVIKNVAKKYGKTVTFMPKPIFND-NGSGMHVHQSLWKDGQPLFAGD 288 Query: 265 KYIEQAIEKL-----SKRHAEHIKLYGS---DNDMRLTGRHETASMTAFSSGVANRGSSI 316 KY + L +HA + + + ++ RL E A+S G NR +S+ Sbjct: 289 KYAGFSQMGLWYIGGILKHAPALLAFTNPTTNSYKRLVPGFEAPVNLAYSQG--NRSASV 346 Query: 317 RIPRSVAKEGYGYFEDRRPASNIDPYLVTGIMCETVCGAIDN 358 RIP S E R P + +PYL M I N Sbjct: 347 RIPLSGGNPKAKRLEFRCPDATSNPYLAFAAMLCAGIDGIKN 388 >4S17-A nrPDB Length = 481 Score = 282 bits (721), Expect = 2e-76, Method: Composition-based stats. Identities = 77/348 (22%), Positives = 123/348 (35%), Gaps = 55/348 (15%) Query: 59 FDGSSTNQAP-GHDSDIYLKPVAY--YPDPFRRGDNIVVLAACYNN-DGTPNKFNHRHEA 114 FDGSS ++SD+ L P + DPFR+ + V + + P + R A Sbjct: 57 FDGSSVEGFQAINESDMKLVPDVSTAFIDPFRKHKTLDVAFSIVDPLTDEPYSRDPRQVA 116 Query: 115 ----AKLFAAHKDEEIWFGLEQEYTLFDMYDDVYG--------------WPKG------G 150 A L + + F E E+ +FD W G G Sbjct: 117 GKAEAYLKSTGIADTASFAPEAEFFIFDKVRFENSMQRSFYEVDSIEAPWNSGIDTEDDG 176 Query: 151 YPA------PQGPYYCGVGAGKVYARDMIEAHYRACLYAGLEISGINAEVM-PSQWEFQV 203 P + Y+ + +D+ + GL + + EV Q E Sbjct: 177 TPNIAFKNRVKKGYFPVPPID--HTQDLRDDMVANLQKVGLILERSHHEVAGAGQQEINY 234 Query: 204 GPCTGIDMGDQLWMARYFLHRVAEEFGIKISFHPKPLKGDWNGAGCHTNVSTKEMRQPGG 263 + GD L +Y +H A G +F PKP+ GD NG G H + S + +P Sbjct: 235 RFNSLQHAGDDLMKYKYVVHETAALAGKAATFMPKPIAGD-NGTGMHCHQSLWKDGKP-- 291 Query: 264 MKYIEQAIEKLSK----------RHAEHIKLYGS---DNDMRLTGRHETASMTAFSSGVA 310 + Y E+ LS +H+ + + + ++ RL E +S+ Sbjct: 292 LFYDEKNYGGLSDLARWYIGGLIKHSSSVLAFTNPSLNSYHRLVPGFEAPVNLVYSA--R 349 Query: 311 NRGSSIRIPRSVAKEGYGYFEDRRPASNIDPYLVTGIMCETVCGAIDN 358 NR ++IRIP + E R P + +P+L I N Sbjct: 350 NRSAAIRIPLAGTSPAAKRIEFRAPDPSCNPFLAFSAQLMAGLDGILN 397 >5DM3-A nrPDB Length = 475 Score = 110 bits (276), Expect = 8e-25, Method: Composition-based stats. Identities = 57/324 (17%), Positives = 102/324 (31%), Gaps = 43/324 (13%) Query: 61 GSSTNQAPGHDSDIYLKPVAYYPD--PFRRGDNIVVLAACYNN-DGTPNKFNHRHEAAKL 117 G ++ D +KP P+ G +VL ++ R + Sbjct: 91 GYASTSWQAGYGDYIMKPDLATLRCVPWLEG-TAMVLCDLLDHRTHAEVPHAPRAILKRQ 149 Query: 118 FAAHKDE--EIWFGLEQEYTLFDMYDDVYGWPKGGYPAPQGPYYCGVGAGKVYARDMIEA 175 A + E E E+ LF+ D + G P G + E Sbjct: 150 LARLEAMGLEAIMATELEFFLFEKSLDEI---RKGRFRDLQP-ISGYNEDYHIFQTTKEE 205 Query: 176 HYRACLY-----AGLEISGINAEVMPSQWEFQVGPCTGIDMGDQLWMARYFLHRVAEEFG 230 H L AG+ + G E Q E + +D D +A++ +A + G Sbjct: 206 HVLRPLRNHLHAAGIPVEGTKGEAGAGQEELNIRCAKALDTADYHTIAKHATKEIAWQQG 265 Query: 231 IKISFHPKPLKGDWN----GAGCHTNVSTKEMRQPGGMKYIEQAIEKLS----------K 276 ++F K W+ G+ H + S + P + E+ +S Sbjct: 266 RAVTFLSK-----WHHAHAGSSSHIHQSLWKQGLPA--FHDERDALGMSALMKHYLAGLL 318 Query: 277 RHAE---HIKLYGSDNDMRLTGRHETASMTAFSSGVANRGSSIRIPRSVAKEGYGYFEDR 333 ++A + ++ R + T +S V NR + R+ + E R Sbjct: 319 KYAPDYTYFLAPYLNSYKRFQKGTFAPTRTVWS--VDNRTAGFRLCAEGTR--AVRIECR 374 Query: 334 RPASNIDPYLVTGIMCETVCGAID 357 S+++PYL I+ Sbjct: 375 IGGSDLNPYLAMAGQLAAGIKGIE 398 >4HPP-A nrPDB Length = 443 Score = 89.0 bits (219), Expect = 3e-18, Method: Composition-based stats. Identities = 63/336 (18%), Positives = 107/336 (31%), Gaps = 44/336 (13%) Query: 48 ITSIDQLPEWNFDGSSTNQAPGHDSDIYLKPVAYYPDPFRRGDNIV------VLAACYNN 101 + P+ D SS + G D+ L P +G + + Sbjct: 43 PANSSLTPQDLIDESSPWGSHG---DLRLLPDPNSRVRVEQGPDAAAPALDYLHGNLVET 99 Query: 102 DGTPNKFNHRHEAAKLFAAHKDEEIWF--GLEQEYTLFDMYDDVYGWPKGGYPAPQGPYY 159 DGTP R ++D + E E++L G P + Sbjct: 100 DGTPWPACPRSLLRAEVERYRDSGLQVIAAFEHEFSLL------------GLPGERPAAA 147 Query: 160 CGVGAGKVYARDMIEAHYRACLYAGLEISGINAEVMPSQWEFQVGPCTGIDMGDQLWMAR 219 + A + + A AG E E Q+E P G+ D+ R Sbjct: 148 FSLQAQRAAGQ-FPGWLVSALAQAGTEPEMFLPEYGQRQYEVTCRPAQGVAAADRAVNVR 206 Query: 220 YFLHRVAEEFGIKISFHPKPLKGDWNGAGCHTNVSTK-EMRQPGGMKYIE-QAIEKLSKR 277 VA + G++ F P P G G H ++S + P + + +L + Sbjct: 207 EVTREVARQMGLRTCFAPLPAPGAVT-NGVHLHLSLQHADGSPLLYEPGRPNDLSELGEH 265 Query: 278 HAEHIKLY----------GSDNDMRLTGRHETASMTAFSSGVANRGSSIRI-PR--SVAK 324 A + + + + +RL H +A+ G+ NR +++RI P K Sbjct: 266 WAAGVLAHLPALCALTAPTAASYLRLKPHHWSAAYACL--GLRNREAALRICPVVSVGGK 323 Query: 325 E-GYGY-FEDRRPASNIDPYLVTGIMCETVCGAIDN 358 G Y E R + P+L + I+ Sbjct: 324 PLGKQYNLEFRPMDATTCPHLAMAAVLIAGRLGIER 359 >3O6X-A nrPDB Length = 729 Score = 57.4 bits (137), Expect = 1e-08, Method: Composition-based stats. Identities = 42/202 (20%), Positives = 67/202 (33%), Gaps = 33/202 (16%) Query: 127 WFGLEQEYTLFDM-------YDDVYGWPKGGYPAPQG----PYYCG--VGAGKVYARDMI 173 G EQEY L D + G G+ + + +Y G + +++ Sbjct: 211 NLGWEQEYFLVDTSLYNARPDLRLTGRTLMGHSSAKDQQLEDHYFGSIPPRVTAFMKELE 270 Query: 174 EAHYRACLYAGLEISGINAEVMPSQWEFQVGPCTGIDMGDQLWMARYFLHRVAEEFGIKI 233 C G+ + + EV P+Q+E D + + R+A + + Sbjct: 271 IE----CHKLGIPVKTRHNEVAPNQFELAPIFENCNLANDHNQLVMDLMKRIARKHHFAV 326 Query: 234 SFHPKPLKGDWNGAGCHTNVSTKEM----------RQPGGMKYIEQAIEKLSKRHAEHIK 283 FH KP G NG+G H N S G M ++ + L H Sbjct: 327 LFHEKPYNG-VNGSGKHNNWSLCTDTGINLFAPGKNPKGNMLFLTFLVNVLMMVHKNQDL 385 Query: 284 L----YGSDNDMRLTGRHETAS 301 L + N RL G +E Sbjct: 386 LRASIMSAGNSHRL-GANEAPP 406 >6AA7-A nrPDB Length = 235 Score = 32.4 bits (72), Expect = 0.30, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 3/62 (4%) Query: 1 MAEASIEKTQILQKYLELDQRGRI---IAEYVWIDGTGNLRSKGRTLKKRITSIDQLPEW 57 M + +I +K + + ++G + +A Y+ + G R + T+ K T ++PEW Sbjct: 142 MKKMTINWEPCCEKIIPVPRQGILKGDVAMYLLLKDGGRYRCQFDTVYKAKTDSKKMPEW 201 Query: 58 NF 59 +F Sbjct: 202 HF 203 >2J9I-A nrPDB Length = 421 Score = 31.6 bits (70), Expect = 0.51, Method: Composition-based stats. Identities = 7/29 (24%), Positives = 12/29 (41%) Query: 330 FEDRRPASNIDPYLVTGIMCETVCGAIDN 358 E++ A+ +PYLV I + Sbjct: 318 IENKAGAAAANPYLVLAATVAAGLDGIQS 346 >5Y8R-A nrPDB Length = 234 Score = 31.6 bits (70), Expect = 0.57, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 27/50 (54%), Gaps = 3/50 (6%) Query: 13 QKYLELDQRGRI---IAEYVWIDGTGNLRSKGRTLKKRITSIDQLPEWNF 59 +K + + ++G + ++ Y+ + G R + T+ K + ++PEW+F Sbjct: 153 EKIMPVPKQGILKGDVSMYLLLKDGGRYRCQFDTVYKAKSVPSKMPEWHF 202 >1U1Z-A nrPDB Length = 168 Score = 31.6 bits (70), Expect = 0.60, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 39/102 (38%), Gaps = 23/102 (22%) Query: 148 KGGYPAPQGPYYCGVGAGKVYARDMIEAHYRACLYAGLEISGINAEVMPSQWEF------ 201 G +P + P GV +IEA +A G ++ +V P+ Sbjct: 67 NGHFP--EHPIMPGVL--------IIEAMAQAAGILGFKML----DVKPADGTLYYFVGS 112 Query: 202 -QVGPCTGIDMGDQLWM-ARYF-LHRVAEEFGIKISFHPKPL 240 ++ + GDQL + A++ + R +F + KP+ Sbjct: 113 DKLRFRQPVLPGDQLQLHAKFISVKRSIWKFDCHATVDDKPV 154 >5LZ5-A nrPDB Length = 388 Score = 30.4 bits (67), Expect = 1.1, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 31/97 (31%), Gaps = 7/97 (7%) Query: 136 LFDMYDDVYGWPKGGYPAPQGP---YYCGVGAGKVYARDMIEAHYRACLYAGLEISGINA 192 LF W P + P + G+GA R + A G ++ + Sbjct: 79 LFGSMTTPANWNSPLRPGEKYPLVVFSHGLGA----FRTLYSAIGIDLASHGFIVAAVEH 134 Query: 193 EVMPSQWEFQVGPCTGIDMGDQLWMARYFLHRVAEEF 229 + + + ++GD+ W+ L + E Sbjct: 135 RDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEETH 171 >2PXS-A nrPDB Length = 228 Score = 30.4 bits (67), Expect = 1.3, Method: Composition-based stats. Identities = 9/35 (25%), Positives = 20/35 (57%) Query: 25 IAEYVWIDGTGNLRSKGRTLKKRITSIDQLPEWNF 59 ++ Y+ + G LR + T+ K + ++P+W+F Sbjct: 162 VSMYLLLKDGGRLRCQFDTVYKAKSVPRKMPDWHF 196 >2FL1-A nrPDB Length = 228 Score = 30.4 bits (67), Expect = 1.4, Method: Composition-based stats. Identities = 9/35 (25%), Positives = 19/35 (54%) Query: 25 IAEYVWIDGTGNLRSKGRTLKKRITSIDQLPEWNF 59 ++ Y+ + G R + T+ K T ++P+W+F Sbjct: 162 VSMYLLLKDGGRYRCQFDTIYKAKTEPKEMPDWHF 196 >6MDP-A nrPDB Length = 768 Score = 29.3 bits (64), Expect = 3.1, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 2/50 (4%) Query: 36 NLRSKGRTLKKRITSIDQLPEWNFDGSSTNQAPGHDSDIYLKPVAYYPDP 85 NL K +T + R + I+ P+WNF+ SDI+ + A P Sbjct: 218 NLIGKAKTKENRQSIIN--PDWNFEKMGIGGLDKEFSDIFRRAFASRVFP 265 >3CKC-A nrPDB Length = 527 Score = 28.1 bits (61), Expect = 6.0, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 30/86 (34%), Gaps = 9/86 (10%) Query: 60 DGSSTNQAPGHDSDIYLKPVAYYPDP----FRRGDNIVVLAACY-----NNDGTPNKFNH 110 DG S + + SD A YPD FR + + A + G N+ Sbjct: 382 DGLSIVKWQNYRSDGKPVSHATYPDTDIPLFRLAEAYLTRAEAIFRQGGDATGDINELRK 441 Query: 111 RHEAAKLFAAHKDEEIWFGLEQEYTL 136 R + ++E+ +E+ L Sbjct: 442 RANCTRKVQTVTEQELIDEWAREFYL 467 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.311 0.131 0.360 Lambda K H 0.267 0.0402 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,918,053 Number of Sequences: 36641 Number of extensions: 614105 Number of successful extensions: 1495 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 32 Number of HSP's successfully gapped in prelim test: 10 Number of HSP's that attempted gapping in prelim test: 1379 Number of HSP's gapped (non-prelim): 45 length of query: 370 length of database: 10,336,785 effective HSP length: 98 effective length of query: 272 effective length of database: 6,745,967 effective search space: 1834903024 effective search space used: 1834903024 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 60 (27.7 bits)