BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P31335 (593 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1M9N-A nrPDB 1226 0.0 5UY8-A nrPDB 1060 0.0 4A1O-A nrPDB 228 8e-60 4EHI-A nrPDB 210 1e-54 1ZCZ-A nrPDB 171 1e-42 3S1S-A nrPDB 32 0.55 1JL0-A nrPDB 32 0.59 2WVR-A nrPDB 32 0.82 3H0W-A nrPDB 31 1.9 4B46-A nrPDB 30 2.9 2WW9-B nrPDB 30 4.1 5GUP-F nrPDB 29 5.4 3C2B-A nrPDB 29 6.5 1KP9-A nrPDB 29 7.3 5VFB-A nrPDB 28 8.5 >1M9N-A nrPDB Length = 613 Score = 1226 bits (3172), Expect = 0.0, Method: Compositional matrix adjust. Identities = 593/593 (100%), Positives = 593/593 (100%) Query: 1 MAARQQLALLSVSEKAGLVEFARSLNALGLGLIASGGTATALRDAGLPVRDVSDLTGFPE 60 MAARQQLALLSVSEKAGLVEFARSLNALGLGLIASGGTATALRDAGLPVRDVSDLTGFPE Sbjct: 21 MAARQQLALLSVSEKAGLVEFARSLNALGLGLIASGGTATALRDAGLPVRDVSDLTGFPE 80 Query: 61 MLGGRVKTLHPAVHAGILARNIPEDNADMNKQDFSLVRVVVCNLYPFVKTVSSPGVTVPE 120 MLGGRVKTLHPAVHAGILARNIPEDNADMNKQDFSLVRVVVCNLYPFVKTVSSPGVTVPE Sbjct: 81 MLGGRVKTLHPAVHAGILARNIPEDNADMNKQDFSLVRVVVCNLYPFVKTVSSPGVTVPE 140 Query: 121 AVEKIDIGGVALLRAAAKNHARVTVVCDPADYSSVAKEMAASKDKDTSVETRRHLALKAF 180 AVEKIDIGGVALLRAAAKNHARVTVVCDPADYSSVAKEMAASKDKDTSVETRRHLALKAF Sbjct: 141 AVEKIDIGGVALLRAAAKNHARVTVVCDPADYSSVAKEMAASKDKDTSVETRRHLALKAF 200 Query: 181 THTAQYDAAISDYFRKEYSKGVSQLPLRYGMNPHQSPAQLYTTRPKLPLTVVNGSPGFIN 240 THTAQYDAAISDYFRKEYSKGVSQLPLRYGMNPHQSPAQLYTTRPKLPLTVVNGSPGFIN Sbjct: 201 THTAQYDAAISDYFRKEYSKGVSQLPLRYGMNPHQSPAQLYTTRPKLPLTVVNGSPGFIN 260 Query: 241 LCDALNAWQLVKELKQALGIPAAASFKHVSPAGAAVGIPLSEEEAQVCMVHDLHKTLTPL 300 LCDALNAWQLVKELKQALGIPAAASFKHVSPAGAAVGIPLSEEEAQVCMVHDLHKTLTPL Sbjct: 261 LCDALNAWQLVKELKQALGIPAAASFKHVSPAGAAVGIPLSEEEAQVCMVHDLHKTLTPL 320 Query: 301 ASAYARSRGADRMSSFGDFIALSDICDVPTAKIISREVSDGVVAPGYEEEALKILSKKKN 360 ASAYARSRGADRMSSFGDFIALSDICDVPTAKIISREVSDGVVAPGYEEEALKILSKKKN Sbjct: 321 ASAYARSRGADRMSSFGDFIALSDICDVPTAKIISREVSDGVVAPGYEEEALKILSKKKN 380 Query: 361 GGYCVLQMDPNYEPDDNEIRTLYGLQLMQKRNNAVIDRSLFKNIVTKNKTLPESAVRDLI 420 GGYCVLQMDPNYEPDDNEIRTLYGLQLMQKRNNAVIDRSLFKNIVTKNKTLPESAVRDLI Sbjct: 381 GGYCVLQMDPNYEPDDNEIRTLYGLQLMQKRNNAVIDRSLFKNIVTKNKTLPESAVRDLI 440 Query: 421 VASIAVKYTQSNSVCYAKDGQVIGIGAGQQSRIHCTRLAGDKANSWWLRHHPRVLSMKFK 480 VASIAVKYTQSNSVCYAKDGQVIGIGAGQQSRIHCTRLAGDKANSWWLRHHPRVLSMKFK Sbjct: 441 VASIAVKYTQSNSVCYAKDGQVIGIGAGQQSRIHCTRLAGDKANSWWLRHHPRVLSMKFK 500 Query: 481 AGVKRAEVSNAIDQYVTGTIGEDEDLVKWQAMFEEVPAQLTEAEKKQWIAKLTAVSLSSD 540 AGVKRAEVSNAIDQYVTGTIGEDEDLVKWQAMFEEVPAQLTEAEKKQWIAKLTAVSLSSD Sbjct: 501 AGVKRAEVSNAIDQYVTGTIGEDEDLVKWQAMFEEVPAQLTEAEKKQWIAKLTAVSLSSD 560 Query: 541 AFFPFRDNVDRAKRIGVQFIVAPSGSAADEVVIEACNELGITLIHTNLRLFHH 593 AFFPFRDNVDRAKRIGVQFIVAPSGSAADEVVIEACNELGITLIHTNLRLFHH Sbjct: 561 AFFPFRDNVDRAKRIGVQFIVAPSGSAADEVVIEACNELGITLIHTNLRLFHH 613 >5UY8-A nrPDB Length = 601 Score = 1060 bits (2740), Expect = 0.0, Method: Compositional matrix adjust. Identities = 493/588 (83%), Positives = 549/588 (93%) Query: 6 QLALLSVSEKAGLVEFARSLNALGLGLIASGGTATALRDAGLPVRDVSDLTGFPEMLGGR 65 QLAL SVS+K GLVEFAR+L ALGL L+ASGGTA ALRDAGL VRDVS+LTGFPEMLGGR Sbjct: 14 QLALFSVSDKTGLVEFARNLTALGLNLVASGGTAKALRDAGLAVRDVSELTGFPEMLGGR 73 Query: 66 VKTLHPAVHAGILARNIPEDNADMNKQDFSLVRVVVCNLYPFVKTVSSPGVTVPEAVEKI 125 VKTLHPAVHAGILARNIPEDNADM + DF+L+RVV CNLYPFVKTV+SPGVTV EAVE+I Sbjct: 74 VKTLHPAVHAGILARNIPEDNADMARLDFNLIRVVACNLYPFVKTVASPGVTVEEAVEQI 133 Query: 126 DIGGVALLRAAAKNHARVTVVCDPADYSSVAKEMAASKDKDTSVETRRHLALKAFTHTAQ 185 DIGGV LLRAAAKNHARVTVVC+P DY V+ EM +S+ KDTS+ETRR LALKAFTHTAQ Sbjct: 134 DIGGVTLLRAAAKNHARVTVVCEPEDYVVVSTEMQSSESKDTSLETRRQLALKAFTHTAQ 193 Query: 186 YDAAISDYFRKEYSKGVSQLPLRYGMNPHQSPAQLYTTRPKLPLTVVNGSPGFINLCDAL 245 YD AISDYFRK+YSKGVSQ+PLRYGMNPHQ+PAQLYT +PKLP+TV+NG+PGFINLCDAL Sbjct: 194 YDEAISDYFRKQYSKGVSQMPLRYGMNPHQTPAQLYTLQPKLPITVLNGAPGFINLCDAL 253 Query: 246 NAWQLVKELKQALGIPAAASFKHVSPAGAAVGIPLSEEEAQVCMVHDLHKTLTPLASAYA 305 NAWQLVKELK+ALGIPAAASFKHVSPAGAAVGIPLSE+EA+VCMV+DL+KTLTP+++AYA Sbjct: 254 NAWQLVKELKEALGIPAAASFKHVSPAGAAVGIPLSEDEAKVCMVYDLYKTLTPISAAYA 313 Query: 306 RSRGADRMSSFGDFIALSDICDVPTAKIISREVSDGVVAPGYEEEALKILSKKKNGGYCV 365 R+RGADRMSSFGDF+ALSD+CDVPTAKIISREVSDG++APGYEEEAL ILSKKKNG YCV Sbjct: 314 RARGADRMSSFGDFVALSDVCDVPTAKIISREVSDGIIAPGYEEEALTILSKKKNGNYCV 373 Query: 366 LQMDPNYEPDDNEIRTLYGLQLMQKRNNAVIDRSLFKNIVTKNKTLPESAVRDLIVASIA 425 LQMD +Y+PD+NE+RTL+GL L QKRNN V+D+SLF N+VTKNK LPESA+RDLIVA+IA Sbjct: 374 LQMDQSYKPDENEVRTLFGLHLSQKRNNGVVDKSLFSNVVTKNKDLPESALRDLIVATIA 433 Query: 426 VKYTQSNSVCYAKDGQVIGIGAGQQSRIHCTRLAGDKANSWWLRHHPRVLSMKFKAGVKR 485 VKYTQSNSVCYAK+GQVIGIGAGQQSRIHCTRLAGDKAN WWLRHHP+VLSMKFK GVKR Sbjct: 434 VKYTQSNSVCYAKNGQVIGIGAGQQSRIHCTRLAGDKANYWWLRHHPQVLSMKFKTGVKR 493 Query: 486 AEVSNAIDQYVTGTIGEDEDLVKWQAMFEEVPAQLTEAEKKQWIAKLTAVSLSSDAFFPF 545 AE+SNAIDQYVTGTIGEDEDL+KW+A+FEEVP LTEAEKK+W+ KLT VS+SSDAFFPF Sbjct: 494 AEISNAIDQYVTGTIGEDEDLIKWKALFEEVPELLTEAEKKEWVEKLTEVSISSDAFFPF 553 Query: 546 RDNVDRAKRIGVQFIVAPSGSAADEVVIEACNELGITLIHTNLRLFHH 593 RDNVDRAKR GV +I APSGSAAD+VVIEAC+ELGI L HTNLRLFHH Sbjct: 554 RDNVDRAKRSGVAYIAAPSGSAADKVVIEACDELGIILAHTNLRLFHH 601 >4A1O-A nrPDB Length = 523 Score = 228 bits (580), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 166/481 (34%), Positives = 250/481 (51%), Gaps = 58/481 (12%) Query: 8 ALLSVSEKAGLVEFARSLNALGLGLIASGGTATALRDAGLPVRDVSDLTGFPEMLGGRVK 67 AL+SV +K GLV+ A+ L+A G+ +I++G TA + D G+PV V LTGFPE+L GRVK Sbjct: 13 ALISVYDKTGLVDLAQGLSAAGVEIISTGSTAKTIADTGIPVTPVEQLTGFPEVLDGRVK 72 Query: 68 TLHPAVHAGILAR-NIPEDNADMNKQDFSLVRVVVCNLYPFVKTVSSPGVTVPEAVEKID 126 TLHP VHAG+LA E A + + +VV NLYPF +TV S G +V + VE+ID Sbjct: 73 TLHPRVHAGLLADLRKSEHAAALEQLGIEAFELVVVNLYPFSQTVES-GASVDDCVEQID 131 Query: 127 IGGVALLRAAAKNHARVTVVCDPADYSSVAKEMAASKDKDTSVETRRHLALKAFTHTAQY 186 IGG A++RAAAKNH VV DP Y V +AA + ++ R+ LA AF H A+Y Sbjct: 132 IGGPAMVRAAAKNHPSAAVVTDPLGYHGV---LAALRAGGFTLAERKRLASLAFQHIAEY 188 Query: 187 DAAISDYFRKEYS--KGVSQLP------------LRYGMNPHQSPAQLY---TTRPKLPL 229 D A++ + ++ + V+ P LRYG NPHQ A LY T P L Sbjct: 189 DIAVASWMQQTLAPEHPVAAFPQWFGRSWRRVAMLRYGENPHQQ-AALYGDPTAWPGLAQ 247 Query: 230 T--VVNGSPGFINLCDALNAWQLVKELKQALGIPAAASFKHVSPAGAAVGIPLSEEEAQV 287 + + N DA AW+ + +Q A KH +P G A+ Sbjct: 248 AEQLHGKDMSYNNFTDADAAWRAAFDHEQTC----VAIIKHANPCGIAI----------- 292 Query: 288 CMVHDLHKTLTPLASAYARSRGADRMSSFGDFIALSDICDVPTAKIISREVSDGVVAPGY 347 + +A A+ ++ D +S++G IA + V A+ +S ++ +VAPGY Sbjct: 293 --------SSVSVADAHRKAHECDPLSAYGGVIAANTEVSVEMAEYVSTIFTEVIVAPGY 344 Query: 348 EEEALKILSKKKNGGYCVLQMDPNYEP--DDNEIRTLYGLQLMQKRN--NAVIDRSLFKN 403 AL +L++KKN +++ EP +E+R + G L+Q+ + +A D Sbjct: 345 APGALDVLARKKN-----IRVLVAAEPLAGGSELRPISGGLLIQQSDQLDAHGDNPANWT 399 Query: 404 IVTKNKTLPESAVRDLIVASIAVKYTQSNSVCYAKDGQVIGIGAGQQSRIHCTRLAGDKA 463 + T + P + + DL+ A A + +SN++ A DG +G+G GQ +R+ RLA ++ Sbjct: 400 LATGSPADPAT-LTDLVFAWRACRAVKSNAIVIAADGATVGVGMGQVNRVDAARLAVERG 458 Query: 464 N 464 Sbjct: 459 G 459 Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 26/56 (46%), Positives = 32/56 (57%) Query: 538 SSDAFFPFRDNVDRAKRIGVQFIVAPSGSAADEVVIEACNELGITLIHTNLRLFHH 593 +SDAFFPF D ++ GV +V P GS DE V EA + G+TL T R F H Sbjct: 468 ASDAFFPFPDGLETLAAAGVTAVVHPGGSVRDEEVTEAAAKAGVTLYLTGARHFAH 523 >4EHI-A nrPDB Length = 534 Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 148/464 (31%), Positives = 228/464 (49%), Gaps = 52/464 (11%) Query: 8 ALLSVSEKAGLVEFARSLNALGLGLIASGGTATALRDAGLPVRDVSDLTGFPEMLGGRVK 67 ALLSVS+K G+VEF + L LG ++++GGT L++ G+ V +VSD T PE+ GRVK Sbjct: 27 ALLSVSDKEGIVEFGKELENLGFEILSTGGTFKLLKENGIKVIEVSDFTKSPELFEGRVK 86 Query: 68 TLHPAVHAGILARNIPEDNADMNKQDFSLVRVVVC-NLYPFVKTVSSPGVTVPEAVEKID 126 TLHP +H GIL + E++ K++ L +VC NLYPF KT E +E ID Sbjct: 87 TLHPKIHGGILHKRSDENHIKQAKENEILGIDLVCVNLYPFKKTTIMSD-DFDEIIENID 145 Query: 127 IGGVALLRAAAKNHARVTVVCDPADYSSVAKEMAASKDKDTSVETRRHLALKAFTHTAQY 186 IGG A++R+AAKN+ V V+CDP DY V + + ++ + R +L +KA+ HTA Y Sbjct: 146 IGGPAMIRSAAKNYKDVMVLCDPLDYEKVIETLKKGQNDEN---FRLNLMIKAYEHTANY 202 Query: 187 DAAISDYFRKEYSKG-------VSQ--LPLRYGMNPHQSPAQLYTTRPKLP--LTVVNGS 235 DA I++Y + ++ G V Q +YG NPHQ A LY + G Sbjct: 203 DAYIANYMNERFNGGFGASKFIVGQKVFDTKYGENPHQKGA-LYEFDAFFSANFKALKGE 261 Query: 236 PGFINLCDALNAWQLVKELKQALGIPAAASFKHVSPAGAAVGIPLSEEEAQVCMVHDLHK 295 F NL D A L +A PA A KH +P G A+ Sbjct: 262 ASFNNLTDINAALNLASSFDKA---PAIAIVKHGNPCGFAIK------------------ 300 Query: 296 TLTPLASAYARSRGADRMSSFGDFIALSDICDVPTAKIISREVSDGVVAPGYEEEALKIL 355 L +Y + D +S++G +A++ D A I+ + ++A +E+AL + Sbjct: 301 --ENLVQSYIHALKCDSVSAYGGVVAINGTLDEALANKINEIYVEVIIAANVDEKALAVF 358 Query: 356 SKKKNGGYCVLQMDPNYEP------DDNEIRTLYGLQLMQKRNNAVIDRSLFKNIVTKNK 409 KK +++ P D + + + G + Q + D ++++ + Sbjct: 359 EGKKR-----IKIFTQESPFLIRSFDKYDFKHIDGGFVYQNSDEVGEDELKNAKLMSQRE 413 Query: 410 TLPESAVRDLIVASIAVKYTQSNSVCYAKDGQVIGIGAGQQSRI 453 E ++DL +A +T+SN+V Y K+G ++ IG G SRI Sbjct: 414 ASKEE-LKDLEIAMKIAAFTKSNNVVYVKNGAMVAIGMGMTSRI 456 Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 29/62 (46%), Positives = 42/62 (67%) Query: 532 LTAVSLSSDAFFPFRDNVDRAKRIGVQFIVAPSGSAADEVVIEACNELGITLIHTNLRLF 591 L L+S+AFFPFRD++D A ++GV+ IV P GS D+ V++A +E G+ L T +R F Sbjct: 473 LQGCVLASEAFFPFRDSIDEASKVGVKAIVEPGGSIRDDEVVKAADEYGMALYFTGVRHF 532 Query: 592 HH 593 H Sbjct: 533 LH 534 >1ZCZ-A nrPDB Length = 464 Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 157/463 (33%), Positives = 227/463 (49%), Gaps = 82/463 (17%) Query: 9 LLSVSEKAGLVEFARSLNALGLGLIASGGTATALRDAGLPVRDVSDLTGFPEMLGGRVKT 68 L+S+ EK ++ R L+ G + AS GTA L+ G+ DVS +TGF +LGG VKT Sbjct: 17 LVSLYEKEKYLDILRELHEKGWEIWASSGTAKFLKSNGIEANDVSTITGFENLLGGLVKT 76 Query: 69 LHPAVHAGILARNIPEDNADMNKQDFSLVRVVVCNLYPFVKTVSSPGVTVPEAVEKIDIG 128 LHP + AGIL PE D VV +LYP P+ IDIG Sbjct: 77 LHPEIFAGILG---PEPRWD----------VVFVDLYP-----------PPD----IDIG 108 Query: 129 GVALLRAAAKNHARVTVVCDPADYSSVAKEMAASKDKDTSVETRRHLALKAFTHTAQYDA 188 GVALLRAAAKN +V PA + ++A D + ETR++LA F T+ YD+ Sbjct: 109 GVALLRAAAKNWKKVK----PA-FDMETLKLAIEIDDE---ETRKYLAGMTFAFTSVYDS 160 Query: 189 AISDYFRKEYSKGVSQ--LPLRYGMNPHQSPAQLYTTRPKLPLTVVNGSPGFINLCDALN 246 ++ F + S + L LRYG NPH+ A +Y +P + + F N+ DA N Sbjct: 161 IRANQFVEGISLAFKREDLQLRYGENPHEK-AFVYG-KPAFEILHEGKTISFNNILDAEN 218 Query: 247 AWQLVKELKQALGIPAAASFKHVSPAGAAVGIPLSEEEAQVCMVHDLHKTLTPLASAYAR 306 AW + K L + A KH SP GAA+G E +V +V + Sbjct: 219 AWFMAKNLPRM----GAVVVKHQSPCGAAIG------EDKVEIVK--------------K 254 Query: 307 SRGADRMSSFGDFIALSDICDVPTAKIISREVSDGVVAPGYEEEALKILSKKKNGGYCVL 366 + AD SSFG +A++ D AK + + + + +VAP + +EA+++LSKKK V Sbjct: 255 AIEADDESSFGGILAVNFEMDEEVAKSLKKYL-EVIVAPSFTQEAIEVLSKKK-----VR 308 Query: 367 QMDP-NYEPDDNEIRTLYGLQLMQKRNNAVIDRSLFKNIVTKNKTLPESAVRDLIVASIA 425 + P +Y + +G ++ +R F+ +V + L E + DL A Sbjct: 309 LLKPGDYASWAG--KMAFGSLVLSERKYP---EGNFELVV--GEPLSEKELEDLEFAYRV 361 Query: 426 VKYTQSNSVCYAKDGQVIGIGAGQQSRIH----CTRLAGDKAN 464 V+ +SN+V AKDG +GIG+GQ SR T +AG+KA Sbjct: 362 VEGAKSNAVLIAKDGVTVGIGSGQPSRKRAAWIATVMAGEKAK 404 Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 32/72 (44%), Positives = 41/72 (56%), Gaps = 6/72 (8%) Query: 528 WIAKLTA------VSLSSDAFFPFRDNVDRAKRIGVQFIVAPSGSAADEVVIEACNELGI 581 WIA + A +SDAFFPF D+++ + GV+ +VAP GS DE VIE ELGI Sbjct: 393 WIATVMAGEKAKGAVAASDAFFPFPDSLEILAQAGVKAVVAPLGSIRDEEVIEKARELGI 452 Query: 582 TLIHTNLRLFHH 593 T R+F H Sbjct: 453 TFYKAPSRVFRH 464 >3S1S-A nrPDB Length = 878 Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 8/78 (10%) Query: 56 TGFPEMLGGRVKTLHPAVHAGILARNIP----EDNADMNKQDFSLVRVVVCNLYPFVKTV 111 T F E+L R+ L P + + + N P ED +N +DF+ V VVV N P+V V Sbjct: 358 TLFLELLSIRLGLLFPQL---VSSNNAPTITGEDVCSLNPEDFANVSVVVMNP-PYVSGV 413 Query: 112 SSPGVTVPEAVEKIDIGG 129 + P + A + I + G Sbjct: 414 TDPAIKRKFAHKIIQLTG 431 >1JL0-A nrPDB Length = 334 Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 11/105 (10%) Query: 346 GYEEEALKILSKKKNG-GYCVLQMDPN----YEPDDNEIRTLYGLQ-----LMQKRNNAV 395 ++EE + + NG GYC+ +M+ + Y D E R + LM + + AV Sbjct: 129 NFQEEIEFLNAIFPNGAGYCMGRMNSDCWYLYTLDFPESRVISQPDQTLEILMSELDPAV 188 Query: 396 IDRSLFKNIVTKNKTLPESAVRDLIVASIAVKYTQSNSVCYAKDG 440 +D+ K+ VT ES +RDLI S+ + T N Y+ +G Sbjct: 189 MDQFYMKDGVTAKDVTRESGIRDLIPGSV-IDATMFNPCGYSMNG 232 >2WVR-A nrPDB Length = 209 Score = 32.0 bits (71), Expect = 0.82, Method: Compositional matrix adjust. Identities = 13/25 (52%), Positives = 16/25 (64%) Query: 107 FVKTVSSPGVTVPEAVEKIDIGGVA 131 T SSPGV VPE+ E ++GGV Sbjct: 58 LTSTTSSPGVIVPESSENKNLGGVT 82 >3H0W-A nrPDB Length = 266 Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 387 LMQKRNNAVIDRSLFKNIVTKNKTLPESAVRDLIVASIAVKYTQSNSVCYAKDG 440 LM + + AV+D+ K+ VT ES +RDLI S+ + T N Y+ +G Sbjct: 112 LMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSV-IDATMFNPCGYSMNG 164 >4B46-A nrPDB Length = 395 Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust. Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 328 VPTAKIISREVSDGVVAPGYEEEALKILSKKKNGGYCVLQMDPNYEPDDN 377 V +++II+ GV GY E ++ +K NGG + ++ EPDDN Sbjct: 214 VDSSEIINTLAGGGVSTVGYASEGVE--PRKNNGGGLLSRLTGGDEPDDN 261 >2WW9-B nrPDB Length = 80 Score = 29.6 bits (65), Expect = 4.1, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 27/49 (55%) Query: 4 RQQLALLSVSEKAGLVEFARSLNALGLGLIASGGTATALRDAGLPVRDV 52 R+ L+ +K L E+ + + A+G+G IA G A++ +P+R V Sbjct: 30 REGTQFLAKCKKPDLKEYTKIVKAVGIGFIAVGIIGYAIKLIHIPIRYV 78 >5GUP-F nrPDB Length = 123 Score = 29.3 bits (64), Expect = 5.4, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 4/68 (5%) Query: 304 YARSRGADRMSSFGDFIALSDICDVPTAKIISREVS--DGVVAPGYEEEALKILSKKKNG 361 Y R R +DR + A+ I + P +++ SR +S G A G+ + + + K G Sbjct: 50 YRRVRFSDRQKEVNENFAIDLIAEQPVSEVGSRVISCDGGGGALGHPRVYINLDKETKTG 109 Query: 362 --GYCVLQ 367 GYC LQ Sbjct: 110 TCGYCGLQ 117 >3C2B-A nrPDB Length = 221 Score = 28.9 bits (63), Expect = 6.5, Method: Compositional matrix adjust. Identities = 30/122 (24%), Positives = 50/122 (40%), Gaps = 13/122 (10%) Query: 386 QLMQKRNNAVIDRSLFKNIVTKNKTLPESAVRDLIVASIAVKYTQSNSVCYA----KDGQ 441 Q R NAV+D++L + L E + L + +A S Y +DG Sbjct: 11 QEFSPRQNAVLDQAL--------RLLVEGGEKALTTSGLARAANCSKESLYKWFGDRDGL 62 Query: 442 VIGIGAGQQSRIHCTRLAGDKANSWWLRHHPRVLSMKFKAGVKRAEVSNAIDQYVTGTIG 501 + + QQS++ AGD+ ++ L H V + V +VS A+++ G Sbjct: 63 LAAMITFQQSKVRTFEKAGDRVSAPQLADHLEVFAHDL-LDVLAGDVSLALNRLAIGQAS 121 Query: 502 ED 503 D Sbjct: 122 RD 123 >1KP9-A nrPDB Length = 287 Score = 28.9 bits (63), Expect = 7.3, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 6/104 (5%) Query: 115 GVTVPEAVEKIDIGGVAL-LRAAAKNHARVTVVCDPADYSSVAKEMAASKDKDTSVETRR 173 G T+ AVEK D+ V L L NH + +V + + S +A + D V+ R Sbjct: 76 GATMMRAVEKYDVNVVGLTLSKNQANHVQ-QLVANSENLRSKRVLLAGWEQFDEPVD--R 132 Query: 174 HLALKAFTHTA--QYDAAISDYFRKEYSKGVSQLPLRYGMNPHQ 215 +++ AF H +YDA S R + GV L G++P + Sbjct: 133 IVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKE 176 >5VFB-A nrPDB Length = 728 Score = 28.5 bits (62), Expect = 8.5, Method: Compositional matrix adjust. Identities = 16/44 (36%), Positives = 22/44 (50%) Query: 484 KRAEVSNAIDQYVTGTIGEDEDLVKWQAMFEEVPAQLTEAEKKQ 527 KR E+ ID + G+ D V ++A EE+ L EAE Q Sbjct: 59 KRDELQAKIDGWHQARAGQAHDAVAYKAFLEEIGYLLPEAEDFQ 102 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1M9N-A nrPDB 967 0.0 5UY8-A nrPDB 945 0.0 4EHI-A nrPDB 526 e-149 4A1O-A nrPDB 518 e-147 1ZCZ-A nrPDB 436 e-122 Sequences not found previously or not previously below threshold: 5VFB-A nrPDB 32 0.48 1XDW-A nrPDB 32 0.84 2G6V-A nrPDB 32 0.99 4AMG-A nrPDB 31 1.4 2WVR-A nrPDB 31 1.6 6H3L-A nrPDB 30 3.1 CONVERGED! >1M9N-A nrPDB Length = 613 Score = 967 bits (2500), Expect = 0.0, Method: Composition-based stats. Identities = 593/593 (100%), Positives = 593/593 (100%) Query: 1 MAARQQLALLSVSEKAGLVEFARSLNALGLGLIASGGTATALRDAGLPVRDVSDLTGFPE 60 MAARQQLALLSVSEKAGLVEFARSLNALGLGLIASGGTATALRDAGLPVRDVSDLTGFPE Sbjct: 21 MAARQQLALLSVSEKAGLVEFARSLNALGLGLIASGGTATALRDAGLPVRDVSDLTGFPE 80 Query: 61 MLGGRVKTLHPAVHAGILARNIPEDNADMNKQDFSLVRVVVCNLYPFVKTVSSPGVTVPE 120 MLGGRVKTLHPAVHAGILARNIPEDNADMNKQDFSLVRVVVCNLYPFVKTVSSPGVTVPE Sbjct: 81 MLGGRVKTLHPAVHAGILARNIPEDNADMNKQDFSLVRVVVCNLYPFVKTVSSPGVTVPE 140 Query: 121 AVEKIDIGGVALLRAAAKNHARVTVVCDPADYSSVAKEMAASKDKDTSVETRRHLALKAF 180 AVEKIDIGGVALLRAAAKNHARVTVVCDPADYSSVAKEMAASKDKDTSVETRRHLALKAF Sbjct: 141 AVEKIDIGGVALLRAAAKNHARVTVVCDPADYSSVAKEMAASKDKDTSVETRRHLALKAF 200 Query: 181 THTAQYDAAISDYFRKEYSKGVSQLPLRYGMNPHQSPAQLYTTRPKLPLTVVNGSPGFIN 240 THTAQYDAAISDYFRKEYSKGVSQLPLRYGMNPHQSPAQLYTTRPKLPLTVVNGSPGFIN Sbjct: 201 THTAQYDAAISDYFRKEYSKGVSQLPLRYGMNPHQSPAQLYTTRPKLPLTVVNGSPGFIN 260 Query: 241 LCDALNAWQLVKELKQALGIPAAASFKHVSPAGAAVGIPLSEEEAQVCMVHDLHKTLTPL 300 LCDALNAWQLVKELKQALGIPAAASFKHVSPAGAAVGIPLSEEEAQVCMVHDLHKTLTPL Sbjct: 261 LCDALNAWQLVKELKQALGIPAAASFKHVSPAGAAVGIPLSEEEAQVCMVHDLHKTLTPL 320 Query: 301 ASAYARSRGADRMSSFGDFIALSDICDVPTAKIISREVSDGVVAPGYEEEALKILSKKKN 360 ASAYARSRGADRMSSFGDFIALSDICDVPTAKIISREVSDGVVAPGYEEEALKILSKKKN Sbjct: 321 ASAYARSRGADRMSSFGDFIALSDICDVPTAKIISREVSDGVVAPGYEEEALKILSKKKN 380 Query: 361 GGYCVLQMDPNYEPDDNEIRTLYGLQLMQKRNNAVIDRSLFKNIVTKNKTLPESAVRDLI 420 GGYCVLQMDPNYEPDDNEIRTLYGLQLMQKRNNAVIDRSLFKNIVTKNKTLPESAVRDLI Sbjct: 381 GGYCVLQMDPNYEPDDNEIRTLYGLQLMQKRNNAVIDRSLFKNIVTKNKTLPESAVRDLI 440 Query: 421 VASIAVKYTQSNSVCYAKDGQVIGIGAGQQSRIHCTRLAGDKANSWWLRHHPRVLSMKFK 480 VASIAVKYTQSNSVCYAKDGQVIGIGAGQQSRIHCTRLAGDKANSWWLRHHPRVLSMKFK Sbjct: 441 VASIAVKYTQSNSVCYAKDGQVIGIGAGQQSRIHCTRLAGDKANSWWLRHHPRVLSMKFK 500 Query: 481 AGVKRAEVSNAIDQYVTGTIGEDEDLVKWQAMFEEVPAQLTEAEKKQWIAKLTAVSLSSD 540 AGVKRAEVSNAIDQYVTGTIGEDEDLVKWQAMFEEVPAQLTEAEKKQWIAKLTAVSLSSD Sbjct: 501 AGVKRAEVSNAIDQYVTGTIGEDEDLVKWQAMFEEVPAQLTEAEKKQWIAKLTAVSLSSD 560 Query: 541 AFFPFRDNVDRAKRIGVQFIVAPSGSAADEVVIEACNELGITLIHTNLRLFHH 593 AFFPFRDNVDRAKRIGVQFIVAPSGSAADEVVIEACNELGITLIHTNLRLFHH Sbjct: 561 AFFPFRDNVDRAKRIGVQFIVAPSGSAADEVVIEACNELGITLIHTNLRLFHH 613 >5UY8-A nrPDB Length = 601 Score = 945 bits (2442), Expect = 0.0, Method: Composition-based stats. Identities = 494/591 (83%), Positives = 550/591 (93%) Query: 3 ARQQLALLSVSEKAGLVEFARSLNALGLGLIASGGTATALRDAGLPVRDVSDLTGFPEML 62 A QLAL SVS+K GLVEFAR+L ALGL L+ASGGTA ALRDAGL VRDVS+LTGFPEML Sbjct: 11 APGQLALFSVSDKTGLVEFARNLTALGLNLVASGGTAKALRDAGLAVRDVSELTGFPEML 70 Query: 63 GGRVKTLHPAVHAGILARNIPEDNADMNKQDFSLVRVVVCNLYPFVKTVSSPGVTVPEAV 122 GGRVKTLHPAVHAGILARNIPEDNADM + DF+L+RVV CNLYPFVKTV+SPGVTV EAV Sbjct: 71 GGRVKTLHPAVHAGILARNIPEDNADMARLDFNLIRVVACNLYPFVKTVASPGVTVEEAV 130 Query: 123 EKIDIGGVALLRAAAKNHARVTVVCDPADYSSVAKEMAASKDKDTSVETRRHLALKAFTH 182 E+IDIGGV LLRAAAKNHARVTVVC+P DY V+ EM +S+ KDTS+ETRR LALKAFTH Sbjct: 131 EQIDIGGVTLLRAAAKNHARVTVVCEPEDYVVVSTEMQSSESKDTSLETRRQLALKAFTH 190 Query: 183 TAQYDAAISDYFRKEYSKGVSQLPLRYGMNPHQSPAQLYTTRPKLPLTVVNGSPGFINLC 242 TAQYD AISDYFRK+YSKGVSQ+PLRYGMNPHQ+PAQLYT +PKLP+TV+NG+PGFINLC Sbjct: 191 TAQYDEAISDYFRKQYSKGVSQMPLRYGMNPHQTPAQLYTLQPKLPITVLNGAPGFINLC 250 Query: 243 DALNAWQLVKELKQALGIPAAASFKHVSPAGAAVGIPLSEEEAQVCMVHDLHKTLTPLAS 302 DALNAWQLVKELK+ALGIPAAASFKHVSPAGAAVGIPLSE+EA+VCMV+DL+KTLTP+++ Sbjct: 251 DALNAWQLVKELKEALGIPAAASFKHVSPAGAAVGIPLSEDEAKVCMVYDLYKTLTPISA 310 Query: 303 AYARSRGADRMSSFGDFIALSDICDVPTAKIISREVSDGVVAPGYEEEALKILSKKKNGG 362 AYAR+RGADRMSSFGDF+ALSD+CDVPTAKIISREVSDG++APGYEEEAL ILSKKKNG Sbjct: 311 AYARARGADRMSSFGDFVALSDVCDVPTAKIISREVSDGIIAPGYEEEALTILSKKKNGN 370 Query: 363 YCVLQMDPNYEPDDNEIRTLYGLQLMQKRNNAVIDRSLFKNIVTKNKTLPESAVRDLIVA 422 YCVLQMD +Y+PD+NE+RTL+GL L QKRNN V+D+SLF N+VTKNK LPESA+RDLIVA Sbjct: 371 YCVLQMDQSYKPDENEVRTLFGLHLSQKRNNGVVDKSLFSNVVTKNKDLPESALRDLIVA 430 Query: 423 SIAVKYTQSNSVCYAKDGQVIGIGAGQQSRIHCTRLAGDKANSWWLRHHPRVLSMKFKAG 482 +IAVKYTQSNSVCYAK+GQVIGIGAGQQSRIHCTRLAGDKAN WWLRHHP+VLSMKFK G Sbjct: 431 TIAVKYTQSNSVCYAKNGQVIGIGAGQQSRIHCTRLAGDKANYWWLRHHPQVLSMKFKTG 490 Query: 483 VKRAEVSNAIDQYVTGTIGEDEDLVKWQAMFEEVPAQLTEAEKKQWIAKLTAVSLSSDAF 542 VKRAE+SNAIDQYVTGTIGEDEDL+KW+A+FEEVP LTEAEKK+W+ KLT VS+SSDAF Sbjct: 491 VKRAEISNAIDQYVTGTIGEDEDLIKWKALFEEVPELLTEAEKKEWVEKLTEVSISSDAF 550 Query: 543 FPFRDNVDRAKRIGVQFIVAPSGSAADEVVIEACNELGITLIHTNLRLFHH 593 FPFRDNVDRAKR GV +I APSGSAAD+VVIEAC+ELGI L HTNLRLFHH Sbjct: 551 FPFRDNVDRAKRSGVAYIAAPSGSAADKVVIEACDELGIILAHTNLRLFHH 601 >4EHI-A nrPDB Length = 534 Score = 526 bits (1355), Expect = e-149, Method: Composition-based stats. Identities = 146/465 (31%), Positives = 226/465 (48%), Gaps = 52/465 (11%) Query: 8 ALLSVSEKAGLVEFARSLNALGLGLIASGGTATALRDAGLPVRDVSDLTGFPEMLGGRVK 67 ALLSVS+K G+VEF + L LG ++++GGT L++ G+ V +VSD T PE+ GRVK Sbjct: 27 ALLSVSDKEGIVEFGKELENLGFEILSTGGTFKLLKENGIKVIEVSDFTKSPELFEGRVK 86 Query: 68 TLHPAVHAGILARNIPEDNADMNKQDFSLVRVVVC-NLYPFVKTVSSPGVTVPEAVEKID 126 TLHP +H GIL + E++ K++ L +VC NLYPF KT E +E ID Sbjct: 87 TLHPKIHGGILHKRSDENHIKQAKENEILGIDLVCVNLYPFKKTTIMSD-DFDEIIENID 145 Query: 127 IGGVALLRAAAKNHARVTVVCDPADYSSVAKEMAASKDKDTSVETRRHLALKAFTHTAQY 186 IGG A++R+AAKN+ V V+CDP DY V + + ++ + R +L +KA+ HTA Y Sbjct: 146 IGGPAMIRSAAKNYKDVMVLCDPLDYEKVIETLKKGQNDEN---FRLNLMIKAYEHTANY 202 Query: 187 DAAISDYFRKEYSKGVSQ---------LPLRYGMNPHQSPAQLYTTRPKLP--LTVVNGS 235 DA I++Y + ++ G +YG NPHQ A LY + G Sbjct: 203 DAYIANYMNERFNGGFGASKFIVGQKVFDTKYGENPHQKGA-LYEFDAFFSANFKALKGE 261 Query: 236 PGFINLCDALNAWQLVKELKQALGIPAAASFKHVSPAGAAVGIPLSEEEAQVCMVHDLHK 295 F NL D A L +A PA A KH +P G A+ Sbjct: 262 ASFNNLTDINAALNLASSFDKA---PAIAIVKHGNPCGFAIK------------------ 300 Query: 296 TLTPLASAYARSRGADRMSSFGDFIALSDICDVPTAKIISREVSDGVVAPGYEEEALKIL 355 L +Y + D +S++G +A++ D A I+ + ++A +E+AL + Sbjct: 301 --ENLVQSYIHALKCDSVSAYGGVVAINGTLDEALANKINEIYVEVIIAANVDEKALAVF 358 Query: 356 SKKKNGGYCVLQMDPNYEP------DDNEIRTLYGLQLMQKRNNAVIDRSLFKNIVTKNK 409 KK +++ P D + + + G + Q + D ++++ + Sbjct: 359 EGKKR-----IKIFTQESPFLIRSFDKYDFKHIDGGFVYQNSDEVGEDELKNAKLMSQRE 413 Query: 410 TLPESAVRDLIVASIAVKYTQSNSVCYAKDGQVIGIGAGQQSRIH 454 E ++DL +A +T+SN+V Y K+G ++ IG G SRI Sbjct: 414 ASKEE-LKDLEIAMKIAAFTKSNNVVYVKNGAMVAIGMGMTSRID 457 Score = 107 bits (266), Expect = 2e-23, Method: Composition-based stats. Identities = 29/62 (46%), Positives = 42/62 (67%) Query: 532 LTAVSLSSDAFFPFRDNVDRAKRIGVQFIVAPSGSAADEVVIEACNELGITLIHTNLRLF 591 L L+S+AFFPFRD++D A ++GV+ IV P GS D+ V++A +E G+ L T +R F Sbjct: 473 LQGCVLASEAFFPFRDSIDEASKVGVKAIVEPGGSIRDDEVVKAADEYGMALYFTGVRHF 532 Query: 592 HH 593 H Sbjct: 533 LH 534 >4A1O-A nrPDB Length = 523 Score = 518 bits (1334), Expect = e-147, Method: Composition-based stats. Identities = 166/481 (34%), Positives = 250/481 (51%), Gaps = 58/481 (12%) Query: 8 ALLSVSEKAGLVEFARSLNALGLGLIASGGTATALRDAGLPVRDVSDLTGFPEMLGGRVK 67 AL+SV +K GLV+ A+ L+A G+ +I++G TA + D G+PV V LTGFPE+L GRVK Sbjct: 13 ALISVYDKTGLVDLAQGLSAAGVEIISTGSTAKTIADTGIPVTPVEQLTGFPEVLDGRVK 72 Query: 68 TLHPAVHAGILAR-NIPEDNADMNKQDFSLVRVVVCNLYPFVKTVSSPGVTVPEAVEKID 126 TLHP VHAG+LA E A + + +VV NLYPF +TV S G +V + VE+ID Sbjct: 73 TLHPRVHAGLLADLRKSEHAAALEQLGIEAFELVVVNLYPFSQTVES-GASVDDCVEQID 131 Query: 127 IGGVALLRAAAKNHARVTVVCDPADYSSVAKEMAASKDKDTSVETRRHLALKAFTHTAQY 186 IGG A++RAAAKNH VV DP Y V +AA + ++ R+ LA AF H A+Y Sbjct: 132 IGGPAMVRAAAKNHPSAAVVTDPLGYHGV---LAALRAGGFTLAERKRLASLAFQHIAEY 188 Query: 187 DAAISDYFRKEYS--KGVSQLP------------LRYGMNPHQSPAQLY---TTRPKLPL 229 D A++ + ++ + V+ P LRYG NPHQ A LY T P L Sbjct: 189 DIAVASWMQQTLAPEHPVAAFPQWFGRSWRRVAMLRYGENPHQQ-AALYGDPTAWPGLAQ 247 Query: 230 T--VVNGSPGFINLCDALNAWQLVKELKQALGIPAAASFKHVSPAGAAVGIPLSEEEAQV 287 + + N DA AW+ + +Q A KH +P G A+ Sbjct: 248 AEQLHGKDMSYNNFTDADAAWRAAFDHEQTC----VAIIKHANPCGIAI----------- 292 Query: 288 CMVHDLHKTLTPLASAYARSRGADRMSSFGDFIALSDICDVPTAKIISREVSDGVVAPGY 347 + +A A+ ++ D +S++G IA + V A+ +S ++ +VAPGY Sbjct: 293 --------SSVSVADAHRKAHECDPLSAYGGVIAANTEVSVEMAEYVSTIFTEVIVAPGY 344 Query: 348 EEEALKILSKKKNGGYCVLQMDPNYEP--DDNEIRTLYGLQLMQKRN--NAVIDRSLFKN 403 AL +L++KKN +++ EP +E+R + G L+Q+ + +A D Sbjct: 345 APGALDVLARKKN-----IRVLVAAEPLAGGSELRPISGGLLIQQSDQLDAHGDNPANWT 399 Query: 404 IVTKNKTLPESAVRDLIVASIAVKYTQSNSVCYAKDGQVIGIGAGQQSRIHCTRLAGDKA 463 + T + P + + DL+ A A + +SN++ A DG +G+G GQ +R+ RLA ++ Sbjct: 400 LATGSPADPAT-LTDLVFAWRACRAVKSNAIVIAADGATVGVGMGQVNRVDAARLAVERG 458 Query: 464 N 464 Sbjct: 459 G 459 Score = 99.5 bits (246), Expect = 4e-21, Method: Composition-based stats. Identities = 26/64 (40%), Positives = 34/64 (53%) Query: 530 AKLTAVSLSSDAFFPFRDNVDRAKRIGVQFIVAPSGSAADEVVIEACNELGITLIHTNLR 589 ++ +SDAFFPF D ++ GV +V P GS DE V EA + G+TL T R Sbjct: 460 ERVRGAVAASDAFFPFPDGLETLAAAGVTAVVHPGGSVRDEEVTEAAAKAGVTLYLTGAR 519 Query: 590 LFHH 593 F H Sbjct: 520 HFAH 523 >1ZCZ-A nrPDB Length = 464 Score = 436 bits (1121), Expect = e-122, Method: Composition-based stats. Identities = 157/463 (33%), Positives = 227/463 (49%), Gaps = 82/463 (17%) Query: 9 LLSVSEKAGLVEFARSLNALGLGLIASGGTATALRDAGLPVRDVSDLTGFPEMLGGRVKT 68 L+S+ EK ++ R L+ G + AS GTA L+ G+ DVS +TGF +LGG VKT Sbjct: 17 LVSLYEKEKYLDILRELHEKGWEIWASSGTAKFLKSNGIEANDVSTITGFENLLGGLVKT 76 Query: 69 LHPAVHAGILARNIPEDNADMNKQDFSLVRVVVCNLYPFVKTVSSPGVTVPEAVEKIDIG 128 LHP + AGIL PE D VV +LYP P+ IDIG Sbjct: 77 LHPEIFAGILG---PEPRWD----------VVFVDLYP-----------PPD----IDIG 108 Query: 129 GVALLRAAAKNHARVTVVCDPADYSSVAKEMAASKDKDTSVETRRHLALKAFTHTAQYDA 188 GVALLRAAAKN +V PA + ++A D + ETR++LA F T+ YD+ Sbjct: 109 GVALLRAAAKNWKKVK----PA-FDMETLKLAIEIDDE---ETRKYLAGMTFAFTSVYDS 160 Query: 189 AISDYFRKEYSKGVSQ--LPLRYGMNPHQSPAQLYTTRPKLPLTVVNGSPGFINLCDALN 246 ++ F + S + L LRYG NPH+ A +Y +P + + F N+ DA N Sbjct: 161 IRANQFVEGISLAFKREDLQLRYGENPHEK-AFVYG-KPAFEILHEGKTISFNNILDAEN 218 Query: 247 AWQLVKELKQALGIPAAASFKHVSPAGAAVGIPLSEEEAQVCMVHDLHKTLTPLASAYAR 306 AW + K L + A KH SP GAA+G E +V +V + Sbjct: 219 AWFMAKNLPRM----GAVVVKHQSPCGAAIG------EDKVEIVK--------------K 254 Query: 307 SRGADRMSSFGDFIALSDICDVPTAKIISREVSDGVVAPGYEEEALKILSKKKNGGYCVL 366 + AD SSFG +A++ D AK + + + + +VAP + +EA+++LSKKK V Sbjct: 255 AIEADDESSFGGILAVNFEMDEEVAKSLKKYL-EVIVAPSFTQEAIEVLSKKK-----VR 308 Query: 367 QMDP-NYEPDDNEIRTLYGLQLMQKRNNAVIDRSLFKNIVTKNKTLPESAVRDLIVASIA 425 + P +Y + +G ++ +R F+ +V + L E + DL A Sbjct: 309 LLKPGDYASWAG--KMAFGSLVLSERKYP---EGNFELVV--GEPLSEKELEDLEFAYRV 361 Query: 426 VKYTQSNSVCYAKDGQVIGIGAGQQSRIH----CTRLAGDKAN 464 V+ +SN+V AKDG +GIG+GQ SR T +AG+KA Sbjct: 362 VEGAKSNAVLIAKDGVTVGIGSGQPSRKRAAWIATVMAGEKAK 404 Score = 101 bits (252), Expect = 7e-22, Method: Composition-based stats. Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 6/76 (7%) Query: 524 EKKQWIAKLT------AVSLSSDAFFPFRDNVDRAKRIGVQFIVAPSGSAADEVVIEACN 577 ++ WIA + +SDAFFPF D+++ + GV+ +VAP GS DE VIE Sbjct: 389 KRAAWIATVMAGEKAKGAVAASDAFFPFPDSLEILAQAGVKAVVAPLGSIRDEEVIEKAR 448 Query: 578 ELGITLIHTNLRLFHH 593 ELGIT R+F H Sbjct: 449 ELGITFYKAPSRVFRH 464 >5VFB-A nrPDB Length = 728 Score = 32.5 bits (72), Expect = 0.48, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 22/44 (50%) Query: 484 KRAEVSNAIDQYVTGTIGEDEDLVKWQAMFEEVPAQLTEAEKKQ 527 KR E+ ID + G+ D V ++A EE+ L EAE Q Sbjct: 59 KRDELQAKIDGWHQARAGQAHDAVAYKAFLEEIGYLLPEAEDFQ 102 >1XDW-A nrPDB Length = 331 Score = 31.7 bits (70), Expect = 0.84, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 2/72 (2%) Query: 516 VPAQLTEAEKKQWIAKLTAVSLSSDAFFPFRDNVDRAKRIGVQFIVAPSGSAADEVVIEA 575 VP L E + A AV L + F + N+D K++GV++I+ + D + E Sbjct: 30 VPDYLNTKETAEMAAGFDAVILRGNCF-ANKQNLDIYKKLGVKYILTRTAGT-DHIDKEY 87 Query: 576 CNELGITLIHTN 587 ELG + Sbjct: 88 AKELGFPMAFVP 99 >2G6V-A nrPDB Length = 402 Score = 31.7 bits (70), Expect = 0.99, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 5/35 (14%) Query: 435 CYAKDGQVIGIG----AGQQ-SRIHCTRLAGDKAN 464 KDG+++G G AG+ + +H R+AG+KA Sbjct: 57 VIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEKAK 91 >4AMG-A nrPDB Length = 400 Score = 30.9 bits (68), Expect = 1.4, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%) Query: 19 VEFARSLNALGLGL-IASGGTATALRDAGLPVRDVSDLTGFPEML 62 V A++L ALG + A+GG A+ +AGL DVS + ++ Sbjct: 40 VPLAQALRALGHEVRYATGGDIRAVAEAGLCAVDVSPGVNYAKLF 84 >2WVR-A nrPDB Length = 209 Score = 30.9 bits (68), Expect = 1.6, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 41/104 (39%), Gaps = 11/104 (10%) Query: 107 FVKTVSSPGVTVPEAVEKIDIGGVA------LLRA--AAKNHARVTVVCDPADYS--SVA 156 T SSPGV VPE+ E ++GGV +++ +++ V A Y Sbjct: 58 LTSTTSSPGVIVPESSENKNLGGVTQESFDLMIKENPSSQYWKEVAEKRRKALYEALKEN 117 Query: 157 KEMAASKDKDTSVETRRHLALKAFTHTAQYDAAISDYFRKEYSK 200 +++ ++ + R K A++ +++ + + Sbjct: 118 EKLHKEIEQKDNEIARLKKENKELAEVAEHVQYMAE-LIERLNG 160 >6H3L-A nrPDB Length = 643 Score = 29.8 bits (65), Expect = 3.1, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 4/70 (5%) Query: 456 TRLAGDKANSWWLRHHPR--VLSMKFKAGVKRAEVSNAIDQYVTGTIG--EDEDLVKWQA 511 +RL + +W RH + +L + G R+ A Y T+G E + WQ Sbjct: 156 SRLMEQEGIYYWFRHEQKRHILVLSDAYGAHRSPGGYASVPYYPPTLGHRERDHFFDWQM 215 Query: 512 MFEEVPAQLT 521 E P LT Sbjct: 216 AREVQPGSLT 225 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.308 0.121 0.312 Lambda K H 0.267 0.0370 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,539,239 Number of Sequences: 36641 Number of extensions: 727393 Number of successful extensions: 2251 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 12 Number of HSP's that attempted gapping in prelim test: 2186 Number of HSP's gapped (non-prelim): 34 length of query: 593 length of database: 10,336,785 effective HSP length: 103 effective length of query: 490 effective length of database: 6,562,762 effective search space: 3215753380 effective search space used: 3215753380 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 62 (28.6 bits)