BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P31044 (187 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 2IQX-A nrPDB 386 e-108 6ENS-A nrPDB 363 e-101 1A44-A nrPDB 330 3e-91 1BEH-A nrPDB 328 6e-91 1KN3-A nrPDB 309 4e-85 3AXY-A nrPDB 75 2e-14 1WKP-A nrPDB 71 3e-13 1WKO-A nrPDB 68 2e-12 6GAW-Bb nrPDB 65 1e-11 1QOU-A nrPDB 63 6e-11 3J9M-6 nrPDB 61 3e-10 1WPX-B nrPDB 60 6e-10 5MRC-1 nrPDB 52 1e-07 2R77-A nrPDB 47 5e-06 4BEG-A nrPDB 30 0.76 2JIP-A nrPDB 28 1.7 4QDM-A nrPDB 28 2.1 4LB0-A nrPDB 28 3.4 5E7P-A nrPDB 27 5.0 1XP0-A nrPDB 26 9.5 >2IQX-A nrPDB Length = 187 Score = 386 bits (992), Expect = e-108, Method: Compositional matrix adjust. Identities = 186/187 (99%), Positives = 186/187 (99%) Query: 1 MAADISQWAGPLSLQEVDEPPQHALRVDYGGVTVDELGKVLTPTQVMNRPSSISWDGLDP 60 MAADISQWAGPLSLQEVDEPPQHALRVDYGGVTVDELGKVLTPTQVMNRPSSISWDGLDP Sbjct: 1 MAADISQWAGPLSLQEVDEPPQHALRVDYGGVTVDELGKVLTPTQVMNRPSSISWDGLDP 60 Query: 61 GKLYTLVLTDPDAPSRKDPKFREWHHFLVVNMKGNDISSGTVLSEYVGSGPPKDTGLHRY 120 GKLYTLVLTDPDAPSRKDPKFREWHHFLVVNMKGNDISSGTVLSEYVGSGPPKDTGLHRY Sbjct: 61 GKLYTLVLTDPDAPSRKDPKFREWHHFLVVNMKGNDISSGTVLSEYVGSGPPKDTGLHRY 120 Query: 121 VWLVYEQEQPLNCDEPILSNKSGDNRGKFKVESFRKKYHLGAPVAGTCFQAEWDDSVPKL 180 VWLVYEQEQPLNCDEPILSNKSGDNRGKFKVE FRKKYHLGAPVAGTCFQAEWDDSVPKL Sbjct: 121 VWLVYEQEQPLNCDEPILSNKSGDNRGKFKVEEFRKKYHLGAPVAGTCFQAEWDDSVPKL 180 Query: 181 HDQLAGK 187 HDQLAGK Sbjct: 181 HDQLAGK 187 >6ENS-A nrPDB Length = 193 Score = 363 bits (931), Expect = e-101, Method: Compositional matrix adjust. Identities = 173/186 (93%), Positives = 181/186 (97%) Query: 2 AADISQWAGPLSLQEVDEPPQHALRVDYGGVTVDELGKVLTPTQVMNRPSSISWDGLDPG 61 AADISQWAGPL LQEVDEPPQHALRVDY GVTVDELGKVLTPTQVMNRPSSISWDGLDPG Sbjct: 8 AADISQWAGPLCLQEVDEPPQHALRVDYAGVTVDELGKVLTPTQVMNRPSSISWDGLDPG 67 Query: 62 KLYTLVLTDPDAPSRKDPKFREWHHFLVVNMKGNDISSGTVLSEYVGSGPPKDTGLHRYV 121 KLYTLVLTDPDAPSRKDPKFREWHHFLVVNMKGNDISSGTVLS+YVGSGPP TGLHRYV Sbjct: 68 KLYTLVLTDPDAPSRKDPKFREWHHFLVVNMKGNDISSGTVLSDYVGSGPPSGTGLHRYV 127 Query: 122 WLVYEQEQPLNCDEPILSNKSGDNRGKFKVESFRKKYHLGAPVAGTCFQAEWDDSVPKLH 181 WLVYEQEQPL+CDEPILSNKSGDNRGKFKVE+FRKKY+LGAPVAGTC+QAEWDD VPKL+ Sbjct: 128 WLVYEQEQPLSCDEPILSNKSGDNRGKFKVETFRKKYNLGAPVAGTCYQAEWDDYVPKLY 187 Query: 182 DQLAGK 187 +QL+GK Sbjct: 188 EQLSGK 193 >1A44-A nrPDB Length = 185 Score = 330 bits (845), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 156/184 (84%), Positives = 171/184 (92%) Query: 3 ADISQWAGPLSLQEVDEPPQHALRVDYGGVTVDELGKVLTPTQVMNRPSSISWDGLDPGK 62 D+S+W+GPLSLQEVDE PQH L+V YGG VDELGKVLTPTQV NRP+SI+WDGLDPGK Sbjct: 2 VDLSKWSGPLSLQEVDERPQHPLQVKYGGAEVDELGKVLTPTQVKNRPTSITWDGLDPGK 61 Query: 63 LYTLVLTDPDAPSRKDPKFREWHHFLVVNMKGNDISSGTVLSEYVGSGPPKDTGLHRYVW 122 LYTLVLTDPDAPSRKDPK+REWHHFLVVNMKGN+ISSGTVLS+YVGSGPPK TGLHRYVW Sbjct: 62 LYTLVLTDPDAPSRKDPKYREWHHFLVVNMKGNNISSGTVLSDYVGSGPPKGTGLHRYVW 121 Query: 123 LVYEQEQPLNCDEPILSNKSGDNRGKFKVESFRKKYHLGAPVAGTCFQAEWDDSVPKLHD 182 LVYEQE PL CDEPILSN+SGD+RGKFKV SFRKKY LGAPVAGTC+QAEWDD VPKL++ Sbjct: 122 LVYEQEGPLKCDEPILSNRSGDHRGKFKVASFRKKYELGAPVAGTCYQAEWDDYVPKLYE 181 Query: 183 QLAG 186 QL+G Sbjct: 182 QLSG 185 >1BEH-A nrPDB Length = 187 Score = 328 bits (842), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 156/187 (83%), Positives = 170/187 (90%) Query: 1 MAADISQWAGPLSLQEVDEPPQHALRVDYGGVTVDELGKVLTPTQVMNRPSSISWDGLDP 60 M D+S+W+GPLSLQEVDE PQH L V Y G VDELGKVLTPTQV NRP+SISWDGLD Sbjct: 1 MPVDLSKWSGPLSLQEVDEQPQHPLHVTYAGAAVDELGKVLTPTQVKNRPTSISWDGLDS 60 Query: 61 GKLYTLVLTDPDAPSRKDPKFREWHHFLVVNMKGNDISSGTVLSEYVGSGPPKDTGLHRY 120 GKLYTLVLTDPDAPSRKDPK+REWHHFLVVNMKGNDISSGTVLS+YVGSGPPK TGLHRY Sbjct: 61 GKLYTLVLTDPDAPSRKDPKYREWHHFLVVNMKGNDISSGTVLSDYVGSGPPKGTGLHRY 120 Query: 121 VWLVYEQEQPLNCDEPILSNKSGDNRGKFKVESFRKKYHLGAPVAGTCFQAEWDDSVPKL 180 VWLVYEQ++PL CDEPILSN+SGD+RGKFKV SFRKKY L APVAGTC+QAEWDD VPKL Sbjct: 121 VWLVYEQDRPLKCDEPILSNRSGDHRGKFKVASFRKKYELRAPVAGTCYQAEWDDYVPKL 180 Query: 181 HDQLAGK 187 ++QL+GK Sbjct: 181 YEQLSGK 187 >1KN3-A nrPDB Length = 183 Score = 309 bits (792), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 144/183 (78%), Positives = 161/183 (87%) Query: 5 ISQWAGPLSLQEVDEPPQHALRVDYGGVTVDELGKVLTPTQVMNRPSSISWDGLDPGKLY 64 +S W GPLSL EVDE PQH LRV Y V+ELG+VLTPTQV +RP SISWDGLDPGKLY Sbjct: 1 MSMWTGPLSLHEVDEQPQHLLRVTYTEAEVEELGQVLTPTQVKHRPGSISWDGLDPGKLY 60 Query: 65 TLVLTDPDAPSRKDPKFREWHHFLVVNMKGNDISSGTVLSEYVGSGPPKDTGLHRYVWLV 124 TL+LTDPDAPSRK P +REWHHFLVVNMKGNDISSG VLS+YVGSGPPK TGLHRYVWLV Sbjct: 61 TLILTDPDAPSRKKPVYREWHHFLVVNMKGNDISSGNVLSDYVGSGPPKGTGLHRYVWLV 120 Query: 125 YEQEQPLNCDEPILSNKSGDNRGKFKVESFRKKYHLGAPVAGTCFQAEWDDSVPKLHDQL 184 Y+Q++PL CDEPIL+N+SGD+RGKFK +FRKKYHLGAPVAGTC+QAEWD VPKL+ QL Sbjct: 121 YQQDKPLRCDEPILTNRSGDHRGKFKTAAFRKKYHLGAPVAGTCYQAEWDSYVPKLYKQL 180 Query: 185 AGK 187 +GK Sbjct: 181 SGK 183 >3AXY-A nrPDB Length = 170 Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 12/149 (8%) Query: 25 LRVDYGGVTVDELGKVLTPTQVMNRPSSISWDGLDPGKLYTLVLTDPDAPSRKDPKFREW 84 L+V YG TV G L P+ V ++P + G D YTLV+ DPDAPS DP RE+ Sbjct: 30 LKVTYGSKTVSN-GLELKPSMVTHQPR-VEVGGNDMRTFYTLVMVDPDAPSPSDPNLREY 87 Query: 85 HHFLVVNMKGNDISS-GTVLSEYVGSGPPKDTGLHRYVWLVYEQEQPLNCDEPILSNKSG 143 H+LV ++ G +S G + Y P G+HR V+++++Q P Sbjct: 88 LHWLVTDIPGTTAASFGQEVMSY--ESPRPTMGIHRLVFVLFQQLGRQTVYAP------- 138 Query: 144 DNRGKFKVESFRKKYHLGAPVAGTCFQAE 172 R F + F + Y+LG+PVA F ++ Sbjct: 139 GWRQNFNTKDFAELYNLGSPVAAVYFNSQ 167 >1WKP-A nrPDB Length = 171 Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 48/151 (31%), Positives = 71/151 (47%), Gaps = 14/151 (9%) Query: 24 ALRVDYGGVTVDELGKVLTPTQVMNRPSSISWDGLDPGKLYTLVLTDPDAPSRKDPKFRE 83 L+V YG V G L P+QV N+P + G D YTLV+ DPD PS +P RE Sbjct: 30 TLKVTYGQREVTN-GLNLRPSQVQNKPR-VEIGGEDLRNFYTLVMVDPDVPSPSNPHLRE 87 Query: 84 WHHFLVVNMKGNDISSGTVLSEYVGS--GPPKDTGLHRYVWLVYEQEQPLNCDEPILSNK 141 + H+LV ++ ++GT + S P G+HR V++++ Q P Sbjct: 88 YLHWLVTDIPA---TTGTTFGNEIVSYENPSPTAGIHRVVFILFRQLGRQTVYAP----- 139 Query: 142 SGDNRGKFKVESFRKKYHLGAPVAGTCFQAE 172 R F F + Y+LG PVA + ++ Sbjct: 140 --GWRQNFNTREFAEIYNLGLPVAAVFYNSQ 168 >1WKO-A nrPDB Length = 180 Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/160 (31%), Positives = 76/160 (47%), Gaps = 11/160 (6%) Query: 21 PQHALRVDYGGVTVDELGKVLTPTQVMNRPSSISWDGLDPGKLYTLVLTDPDAPSRKDPK 80 P + V Y V G L P+ V ++P + G D +TLV+ DPD P DP Sbjct: 30 PTTKMNVSYNKKQVSN-GHELFPSSVSSKPR-VEIHGGDLRSFFTLVMIDPDVPGPSDPF 87 Query: 81 FREWHHFLVVNMKG-NDISSGTVLSEYVGSGPPKDTGLHRYVWLVYEQEQPLNCDEPILS 139 +E H++V N+ G D + G + Y P G+HR+V++++ Q+Q P + Sbjct: 88 LKEHLHWIVTNIPGTTDATFGKEVVSY--ELPRPSIGIHRFVFVLFRQKQ-RRVIFPNIP 144 Query: 140 NKSGDNRGKFKVESFRKKYHLGAPVAGTCFQAEWDDSVPK 179 ++ N KF VE Y LG PVA F A+ + + K Sbjct: 145 SRDHFNTRKFAVE-----YDLGLPVAAVFFNAQRETAARK 179 >6GAW-Bb nrPDB Length = 380 Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 36/164 (21%) Query: 38 GKVLTPTQVMNRPSSISWDGLDPGKLYTLVLT-------DPDAPSRKDPKFREWHHFLVV 90 G +TPT+ P ++++ D G L+TL+LT +PDA E+ H+LV Sbjct: 190 GNEVTPTEAAQAPE-VTYEA-DEGSLWTLLLTNLDGHLLEPDA---------EYVHWLVT 238 Query: 91 NMKGNDISSGTVLSEYVGSGPPKDTGLHRYVWLVYEQEQPLNCDEPILSNKSGDNR---- 146 N+ GN ++ G Y+ P + +G HR+ +L+++Q++ ++ SGD R Sbjct: 239 NIPGNRVTEGQETCPYLPPFPARGSGFHRFAFLLFKQDKRIDF--------SGDTRPSPC 290 Query: 147 -----GKFKVESFRKKYHLGAPVAGTC-FQAEWDDSVPKLHDQL 184 F F KK+ AG FQ WDDSV ++ QL Sbjct: 291 YQLAQRTFHTFDFYKKHQDAMTPAGLAFFQCRWDDSVTRVFHQL 334 >1QOU-A nrPDB Length = 181 Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 24/148 (16%) Query: 38 GKVLTPTQVMNRPSSISWDGLDPGKLYTLVLTDPDAPSRKDPKFREWHHFLVVNMKG-ND 96 G L P+ V + P + G D +TL++TDPD P DP RE H++V ++ G D Sbjct: 45 GHELFPSAVTSTPR-VEVHGGDMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTD 103 Query: 97 ISSGTVLSEYVGSGPPKDTGLHRYVWLVYEQEQ--------PLNCDEPILSNKSGDNRGK 148 S G + Y P + G+HR+V+L+++Q++ P+ C R Sbjct: 104 SSFGKEVVSY--EMPRPNIGIHRFVFLLFKQKKRGQAMLSPPVVC------------RDG 149 Query: 149 FKVESFRKKYHLGAPVAGTCFQAEWDDS 176 F F ++ LG PVA F + + + Sbjct: 150 FNTRKFTQENELGLPVAAVFFNCQRETA 177 >3J9M-6 nrPDB Length = 380 Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 11/119 (9%) Query: 68 LTDPDAPSRKDPKFREWHHFLVVNMKGNDISSGTVLSEYVGSGPPKDTGLHRYVWLVYEQ 127 L +PDA E+ H+L+ N+ GN ++ G V Y+ P + +G+HR +L+++Q Sbjct: 225 LLEPDA---------EYLHWLLTNIPGNRVAEGQVTCPYLPPFPARGSGIHRLAFLLFKQ 275 Query: 128 EQPLNCDEPILSNKSGD-NRGKFKVESFRKKYHLGAPVAG-TCFQAEWDDSVPKLHDQL 184 +QP++ E + + F+ F KK+ AG + FQ WDDSV + QL Sbjct: 276 DQPIDFSEDARPSPCYQLAQRTFRTFDFYKKHQETMTPAGLSFFQCRWDDSVTYIFHQL 334 >1WPX-B nrPDB Length = 220 Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 18/83 (21%) Query: 63 LYTLVLTDPDAPSRKDPKFREWHHFL-----VVNMKGNDISSGT-------------VLS 104 L+TLV+TDPDAPS+ D K+ E+ H + ++N ++ S T L Sbjct: 89 LFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGATEFFASEFNTKGSNTLI 148 Query: 105 EYVGSGPPKDTGLHRYVWLVYEQ 127 EY+G PPK +G HRYV+L+Y+Q Sbjct: 149 EYMGPAPPKGSGPHRYVFLLYKQ 171 >5MRC-1 nrPDB Length = 348 Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 28/141 (19%) Query: 62 KLYTLVLTDPDAPSRKDPKFRE--WHHFLVVNMKGND-------ISSGTVLSEYVGSGPP 112 +LYT+++ +PD P + F+ + + +N+ ND S ++++Y+ P Sbjct: 203 QLYTVLIVNPDVPDLSNDSFKTALCYGLVNINLTYNDNLIDPRKFHSSNIIADYLPPVPE 262 Query: 113 KDTGLHRYVWLVYEQEQPLNCDEPILSNKSGDN----------RGKFKVESFRKKYHLGA 162 K+ G R+V V+ Q P++ +K G N R F + F KKY+L A Sbjct: 263 KNAGKQRFVVWVFRQ--------PLIEDKQGPNMLEIDRKELSRDDFDIRQFTKKYNLTA 314 Query: 163 PVAGTCFQAEWDDSVPKLHDQ 183 + +++EWD V + ++ Sbjct: 315 -IGAHIWRSEWDAKVAAVREK 334 >2R77-A nrPDB Length = 205 Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 6/93 (6%) Query: 38 GKVLTPTQVMNRPSSISWDGLDP-GKLYTLVLTDPDAPSRKDPKFREWHHFLVVNMKGND 96 G VL + P +I + P G + L + DPD PSR P +E+ H++V +K + Sbjct: 59 GNVLDIAGTGSVPRNIKFSEEPPDGYCFVLFMVDPDYPSRLRPDGKEYIHWVVSGIKTKE 118 Query: 97 ISSGT-----VLSEYVGSGPPKDTGLHRYVWLV 124 + GT + YVG K TGLHR +++ Sbjct: 119 LIKGTQKNCVTILPYVGPSIKKGTGLHRISFII 151 >4BEG-A nrPDB Length = 178 Score = 29.6 bits (65), Expect = 0.76, Method: Compositional matrix adjust. Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 25/93 (26%) Query: 53 ISWDGL-DPGKLYTLVLTDPDAPSRKDPKFREWHHFLVVNMKGN------------DISS 99 + W G + + + + DPDAP+ + H+ V N+ N ++ Sbjct: 52 LRWSGFPSETRSFAVTVYDPDAPT-----LSGFWHWAVANLPANVTELPEGVGDGRELPG 106 Query: 100 GTV-------LSEYVGSGPPKDTGLHRYVWLVY 125 G + + YVG+ PP G+HRY V+ Sbjct: 107 GALTLVNDAGMRRYVGAAPPPGHGVHRYYVAVH 139 >2JIP-A nrPDB Length = 723 Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust. Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 4/80 (5%) Query: 7 QWAGPLSLQEVDEPPQHALRVDYGGVTVDELGK--VLTPTQV--MNRPSSISWDGLDPGK 62 Q A P++ E++E + +G + E + + P +V + RP I+ DP K Sbjct: 635 QKANPIAFVEINEEDAARTGIKHGDSVIVETRRDAMELPARVSDVCRPGLIAVPFFDPKK 694 Query: 63 LYTLVLTDPDAPSRKDPKFR 82 L + D P ++P+++ Sbjct: 695 LVNKLFLDATDPVSREPEYK 714 >4QDM-A nrPDB Length = 355 Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust. Identities = 25/103 (24%), Positives = 40/103 (38%), Gaps = 14/103 (13%) Query: 83 EWHHFLVVNMKGNDISSGTVLSEYVGSGPPKDTGLHRYVWLVYEQEQPLNCDEPILSNKS 142 E H VV +D+++ V++E V G P + GL VW ++ + + Sbjct: 128 ETHIKTVVERYKDDVTAWDVVNEVVDDGTPNERGLRESVWYQITGDEYIRVAFETARKYA 187 Query: 143 GDNRGKF----KVESFRKKYHL----------GAPVAGTCFQA 171 G++ F E K+ HL G P+ G QA Sbjct: 188 GEDAKLFINDYNTEVTPKRDHLYNLVQDLLADGVPIDGVGHQA 230 >4LB0-A nrPDB Length = 348 Score = 27.7 bits (60), Expect = 3.4, Method: Compositional matrix adjust. Identities = 13/26 (50%), Positives = 16/26 (61%) Query: 78 DPKFREWHHFLVVNMKGNDISSGTVL 103 DPK RE HFLV+ +G I S +L Sbjct: 45 DPKGRELRHFLVLEPRGAPIGSVNLL 70 >5E7P-A nrPDB Length = 745 Score = 26.9 bits (58), Expect = 5.0, Method: Compositional matrix adjust. Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Query: 48 NRPSSISWDGLDPGKLYTLVLTD-PDAPSRKD 78 NRP I L PG+L LV + PDA +R+D Sbjct: 630 NRPDLIDPALLRPGRLERLVFVEPPDAAARRD 661 >1XP0-A nrPDB Length = 364 Score = 26.2 bits (56), Expect = 9.5, Method: Compositional matrix adjust. Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 4/33 (12%) Query: 78 DPKFREWHHF----LVVNMKGNDISSGTVLSEY 106 D E HHF +++N GN I SG + EY Sbjct: 166 DESVLEHHHFDQCLMILNSPGNQILSGLSIEEY 198 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 2IQX-A nrPDB 307 3e-84 6ENS-A nrPDB 305 6e-84 1BEH-A nrPDB 298 1e-81 1A44-A nrPDB 295 5e-81 1KN3-A nrPDB 288 1e-78 1WKO-A nrPDB 182 7e-47 1WKP-A nrPDB 180 2e-46 3AXY-A nrPDB 176 4e-45 1QOU-A nrPDB 165 1e-41 6GAW-Bb nrPDB 162 1e-40 3J9M-6 nrPDB 149 9e-37 5MRC-1 nrPDB 124 3e-29 2R77-A nrPDB 116 7e-27 1WPX-B nrPDB 91 2e-19 Sequences not found previously or not previously below threshold: 6HIV-Ab nrPDB 44 3e-05 1FUX-A nrPDB 42 1e-04 4BEG-A nrPDB 41 3e-04 3EYB-A nrPDB 30 0.47 1TOH-A nrPDB 30 0.66 2XSN-A nrPDB 30 0.68 5KYA-B nrPDB 30 0.71 1H9U-A nrPDB 30 0.71 2GL8-A nrPDB 29 1.4 3Q2V-A nrPDB 28 2.6 4M4V-A nrPDB 27 3.6 >2IQX-A nrPDB Length = 187 Score = 307 bits (785), Expect = 3e-84, Method: Composition-based stats. Identities = 186/187 (99%), Positives = 186/187 (99%) Query: 1 MAADISQWAGPLSLQEVDEPPQHALRVDYGGVTVDELGKVLTPTQVMNRPSSISWDGLDP 60 MAADISQWAGPLSLQEVDEPPQHALRVDYGGVTVDELGKVLTPTQVMNRPSSISWDGLDP Sbjct: 1 MAADISQWAGPLSLQEVDEPPQHALRVDYGGVTVDELGKVLTPTQVMNRPSSISWDGLDP 60 Query: 61 GKLYTLVLTDPDAPSRKDPKFREWHHFLVVNMKGNDISSGTVLSEYVGSGPPKDTGLHRY 120 GKLYTLVLTDPDAPSRKDPKFREWHHFLVVNMKGNDISSGTVLSEYVGSGPPKDTGLHRY Sbjct: 61 GKLYTLVLTDPDAPSRKDPKFREWHHFLVVNMKGNDISSGTVLSEYVGSGPPKDTGLHRY 120 Query: 121 VWLVYEQEQPLNCDEPILSNKSGDNRGKFKVESFRKKYHLGAPVAGTCFQAEWDDSVPKL 180 VWLVYEQEQPLNCDEPILSNKSGDNRGKFKVE FRKKYHLGAPVAGTCFQAEWDDSVPKL Sbjct: 121 VWLVYEQEQPLNCDEPILSNKSGDNRGKFKVEEFRKKYHLGAPVAGTCFQAEWDDSVPKL 180 Query: 181 HDQLAGK 187 HDQLAGK Sbjct: 181 HDQLAGK 187 >6ENS-A nrPDB Length = 193 Score = 305 bits (782), Expect = 6e-84, Method: Composition-based stats. Identities = 173/186 (93%), Positives = 181/186 (97%) Query: 2 AADISQWAGPLSLQEVDEPPQHALRVDYGGVTVDELGKVLTPTQVMNRPSSISWDGLDPG 61 AADISQWAGPL LQEVDEPPQHALRVDY GVTVDELGKVLTPTQVMNRPSSISWDGLDPG Sbjct: 8 AADISQWAGPLCLQEVDEPPQHALRVDYAGVTVDELGKVLTPTQVMNRPSSISWDGLDPG 67 Query: 62 KLYTLVLTDPDAPSRKDPKFREWHHFLVVNMKGNDISSGTVLSEYVGSGPPKDTGLHRYV 121 KLYTLVLTDPDAPSRKDPKFREWHHFLVVNMKGNDISSGTVLS+YVGSGPP TGLHRYV Sbjct: 68 KLYTLVLTDPDAPSRKDPKFREWHHFLVVNMKGNDISSGTVLSDYVGSGPPSGTGLHRYV 127 Query: 122 WLVYEQEQPLNCDEPILSNKSGDNRGKFKVESFRKKYHLGAPVAGTCFQAEWDDSVPKLH 181 WLVYEQEQPL+CDEPILSNKSGDNRGKFKVE+FRKKY+LGAPVAGTC+QAEWDD VPKL+ Sbjct: 128 WLVYEQEQPLSCDEPILSNKSGDNRGKFKVETFRKKYNLGAPVAGTCYQAEWDDYVPKLY 187 Query: 182 DQLAGK 187 +QL+GK Sbjct: 188 EQLSGK 193 >1BEH-A nrPDB Length = 187 Score = 298 bits (763), Expect = 1e-81, Method: Composition-based stats. Identities = 156/187 (83%), Positives = 170/187 (90%) Query: 1 MAADISQWAGPLSLQEVDEPPQHALRVDYGGVTVDELGKVLTPTQVMNRPSSISWDGLDP 60 M D+S+W+GPLSLQEVDE PQH L V Y G VDELGKVLTPTQV NRP+SISWDGLD Sbjct: 1 MPVDLSKWSGPLSLQEVDEQPQHPLHVTYAGAAVDELGKVLTPTQVKNRPTSISWDGLDS 60 Query: 61 GKLYTLVLTDPDAPSRKDPKFREWHHFLVVNMKGNDISSGTVLSEYVGSGPPKDTGLHRY 120 GKLYTLVLTDPDAPSRKDPK+REWHHFLVVNMKGNDISSGTVLS+YVGSGPPK TGLHRY Sbjct: 61 GKLYTLVLTDPDAPSRKDPKYREWHHFLVVNMKGNDISSGTVLSDYVGSGPPKGTGLHRY 120 Query: 121 VWLVYEQEQPLNCDEPILSNKSGDNRGKFKVESFRKKYHLGAPVAGTCFQAEWDDSVPKL 180 VWLVYEQ++PL CDEPILSN+SGD+RGKFKV SFRKKY L APVAGTC+QAEWDD VPKL Sbjct: 121 VWLVYEQDRPLKCDEPILSNRSGDHRGKFKVASFRKKYELRAPVAGTCYQAEWDDYVPKL 180 Query: 181 HDQLAGK 187 ++QL+GK Sbjct: 181 YEQLSGK 187 >1A44-A nrPDB Length = 185 Score = 295 bits (756), Expect = 5e-81, Method: Composition-based stats. Identities = 156/185 (84%), Positives = 171/185 (92%) Query: 2 AADISQWAGPLSLQEVDEPPQHALRVDYGGVTVDELGKVLTPTQVMNRPSSISWDGLDPG 61 D+S+W+GPLSLQEVDE PQH L+V YGG VDELGKVLTPTQV NRP+SI+WDGLDPG Sbjct: 1 PVDLSKWSGPLSLQEVDERPQHPLQVKYGGAEVDELGKVLTPTQVKNRPTSITWDGLDPG 60 Query: 62 KLYTLVLTDPDAPSRKDPKFREWHHFLVVNMKGNDISSGTVLSEYVGSGPPKDTGLHRYV 121 KLYTLVLTDPDAPSRKDPK+REWHHFLVVNMKGN+ISSGTVLS+YVGSGPPK TGLHRYV Sbjct: 61 KLYTLVLTDPDAPSRKDPKYREWHHFLVVNMKGNNISSGTVLSDYVGSGPPKGTGLHRYV 120 Query: 122 WLVYEQEQPLNCDEPILSNKSGDNRGKFKVESFRKKYHLGAPVAGTCFQAEWDDSVPKLH 181 WLVYEQE PL CDEPILSN+SGD+RGKFKV SFRKKY LGAPVAGTC+QAEWDD VPKL+ Sbjct: 121 WLVYEQEGPLKCDEPILSNRSGDHRGKFKVASFRKKYELGAPVAGTCYQAEWDDYVPKLY 180 Query: 182 DQLAG 186 +QL+G Sbjct: 181 EQLSG 185 >1KN3-A nrPDB Length = 183 Score = 288 bits (737), Expect = 1e-78, Method: Composition-based stats. Identities = 144/183 (78%), Positives = 161/183 (87%) Query: 5 ISQWAGPLSLQEVDEPPQHALRVDYGGVTVDELGKVLTPTQVMNRPSSISWDGLDPGKLY 64 +S W GPLSL EVDE PQH LRV Y V+ELG+VLTPTQV +RP SISWDGLDPGKLY Sbjct: 1 MSMWTGPLSLHEVDEQPQHLLRVTYTEAEVEELGQVLTPTQVKHRPGSISWDGLDPGKLY 60 Query: 65 TLVLTDPDAPSRKDPKFREWHHFLVVNMKGNDISSGTVLSEYVGSGPPKDTGLHRYVWLV 124 TL+LTDPDAPSRK P +REWHHFLVVNMKGNDISSG VLS+YVGSGPPK TGLHRYVWLV Sbjct: 61 TLILTDPDAPSRKKPVYREWHHFLVVNMKGNDISSGNVLSDYVGSGPPKGTGLHRYVWLV 120 Query: 125 YEQEQPLNCDEPILSNKSGDNRGKFKVESFRKKYHLGAPVAGTCFQAEWDDSVPKLHDQL 184 Y+Q++PL CDEPIL+N+SGD+RGKFK +FRKKYHLGAPVAGTC+QAEWD VPKL+ QL Sbjct: 121 YQQDKPLRCDEPILTNRSGDHRGKFKTAAFRKKYHLGAPVAGTCYQAEWDSYVPKLYKQL 180 Query: 185 AGK 187 +GK Sbjct: 181 SGK 183 >1WKO-A nrPDB Length = 180 Score = 182 bits (462), Expect = 7e-47, Method: Composition-based stats. Identities = 48/160 (30%), Positives = 74/160 (46%), Gaps = 11/160 (6%) Query: 21 PQHALRVDYGGVTVDELGKVLTPTQVMNRPSSISWDGLDPGKLYTLVLTDPDAPSRKDPK 80 P + V Y V G L P+ V ++P + G D +TLV+ DPD P DP Sbjct: 30 PTTKMNVSYNKKQVSN-GHELFPSSVSSKPR-VEIHGGDLRSFFTLVMIDPDVPGPSDPF 87 Query: 81 FREWHHFLVVNMKG-NDISSGTVLSEYVGSGPPKDTGLHRYVWLVYEQEQPLNCDEPILS 139 +E H++V N+ G D + G + Y P G+HR+V++++ Q+Q P + Sbjct: 88 LKEHLHWIVTNIPGTTDATFGKEVVSY--ELPRPSIGIHRFVFVLFRQKQR-RVIFPNIP 144 Query: 140 NKSGDNRGKFKVESFRKKYHLGAPVAGTCFQAEWDDSVPK 179 + R F F +Y LG PVA F A+ + + K Sbjct: 145 S-----RDHFNTRKFAVEYDLGLPVAAVFFNAQRETAARK 179 >1WKP-A nrPDB Length = 171 Score = 180 bits (457), Expect = 2e-46, Method: Composition-based stats. Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 12/153 (7%) Query: 24 ALRVDYGGVTVDELGKVLTPTQVMNRPSSISWDGLDPGKLYTLVLTDPDAPSRKDPKFRE 83 L+V YG V G L P+QV N+P + G D YTLV+ DPD PS +P RE Sbjct: 30 TLKVTYGQREVTN-GLNLRPSQVQNKPR-VEIGGEDLRNFYTLVMVDPDVPSPSNPHLRE 87 Query: 84 WHHFLVVNMKGND-ISSGTVLSEYVGSGPPKDTGLHRYVWLVYEQEQPLNCDEPILSNKS 142 + H+LV ++ + G + Y P G+HR V++++ Q P Sbjct: 88 YLHWLVTDIPATTGTTFGNEIVSY--ENPSPTAGIHRVVFILFRQLGRQTVYAP------ 139 Query: 143 GDNRGKFKVESFRKKYHLGAPVAGTCFQAEWDD 175 R F F + Y+LG PVA + ++ + Sbjct: 140 -GWRQNFNTREFAEIYNLGLPVAAVFYNSQRES 171 >3AXY-A nrPDB Length = 170 Score = 176 bits (447), Expect = 4e-45, Method: Composition-based stats. Identities = 51/155 (32%), Positives = 76/155 (49%), Gaps = 12/155 (7%) Query: 22 QHALRVDYGGVTVDELGKVLTPTQVMNRPSSISWDGLDPGKLYTLVLTDPDAPSRKDPKF 81 L+V YG TV G L P+ V ++P + G D YTLV+ DPDAPS DP Sbjct: 27 STNLKVTYGSKTVSN-GLELKPSMVTHQPR-VEVGGNDMRTFYTLVMVDPDAPSPSDPNL 84 Query: 82 REWHHFLVVNMKGNDISS-GTVLSEYVGSGPPKDTGLHRYVWLVYEQEQPLNCDEPILSN 140 RE+ H+LV ++ G +S G + Y P G+HR V+++++Q P Sbjct: 85 REYLHWLVTDIPGTTAASFGQEVMSY--ESPRPTMGIHRLVFVLFQQLGRQTVYAP---- 138 Query: 141 KSGDNRGKFKVESFRKKYHLGAPVAGTCFQAEWDD 175 R F + F + Y+LG+PVA F ++ + Sbjct: 139 ---GWRQNFNTKDFAELYNLGSPVAAVYFNSQREA 170 >1QOU-A nrPDB Length = 181 Score = 165 bits (417), Expect = 1e-41, Method: Composition-based stats. Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 13/163 (7%) Query: 22 QHALRVDYGG----VTVDELGKVLTPTQVMNRPSSISWDGLDPGKLYTLVLTDPDAPSRK 77 + V Y V G L P+ V + P + G D +TL++TDPD P Sbjct: 26 TVKMSVIYNSNNSIKHVYN-GHELFPSAVTSTPR-VEVHGGDMRSFFTLIMTDPDVPGPS 83 Query: 78 DPKFREWHHFLVVNMKG-NDISSGTVLSEYVGSGPPKDTGLHRYVWLVYEQEQPLNCDEP 136 DP RE H++V ++ G D S G + Y P + G+HR+V+L+++Q++ Sbjct: 84 DPYLREHLHWIVTDIPGTTDSSFGKEVVSY--EMPRPNIGIHRFVFLLFKQKKR----GQ 137 Query: 137 ILSNKSGDNRGKFKVESFRKKYHLGAPVAGTCFQAEWDDSVPK 179 + + R F F ++ LG PVA F + + + + Sbjct: 138 AMLSPPVVCRDGFNTRKFTQENELGLPVAAVFFNCQRETAARR 180 >6GAW-Bb nrPDB Length = 380 Score = 162 bits (409), Expect = 1e-40, Method: Composition-based stats. Identities = 49/170 (28%), Positives = 83/170 (48%), Gaps = 10/170 (5%) Query: 21 PQHALRVDYGGVTVDEL----GKVLTPTQVMNRPSSISWDGLDPGKLYTLVLTDPDAPSR 76 P+ L V Y D + G +TPT+ P ++++ D G L+TL+LT+ D Sbjct: 169 PRVPLHVAYAVGEDDLMPVYHGNEVTPTEAAQAPE-VTYEA-DEGSLWTLLLTNLDG-HL 225 Query: 77 KDPKFREWHHFLVVNMKGNDISSGTVLSEYVGSGPPKDTGLHRYVWLVYEQEQPLNCDEP 136 +P E+ H+LV N+ GN ++ G Y+ P + +G HR+ +L+++Q++ ++ Sbjct: 226 LEPD-AEYVHWLVTNIPGNRVTEGQETCPYLPPFPARGSGFHRFAFLLFKQDKRIDFSGD 284 Query: 137 ILSNKSGD-NRGKFKVESFRKKYHLGAPVAGT-CFQAEWDDSVPKLHDQL 184 + + F F KK+ AG FQ WDDSV ++ QL Sbjct: 285 TRPSPCYQLAQRTFHTFDFYKKHQDAMTPAGLAFFQCRWDDSVTRVFHQL 334 >3J9M-6 nrPDB Length = 380 Score = 149 bits (375), Expect = 9e-37, Method: Composition-based stats. Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 22/176 (12%) Query: 21 PQHALRVDYGGVTVDEL----GKVLTPTQVMNRPSSISWDGLDPGKLYTLV------LTD 70 P+ L V Y D + G +TPT+ P ++++ + L+ L + Sbjct: 169 PRVPLHVAYAVGEDDLMPVYCGNEVTPTEAAQAPE-VTYEAEEGSLWTLLLTSLDGHLLE 227 Query: 71 PDAPSRKDPKFREWHHFLVVNMKGNDISSGTVLSEYVGSGPPKDTGLHRYVWLVYEQEQP 130 PDA E+ H+L+ N+ GN ++ G V Y+ P + +G+HR +L+++Q+QP Sbjct: 228 PDA---------EYLHWLLTNIPGNRVAEGQVTCPYLPPFPARGSGIHRLAFLLFKQDQP 278 Query: 131 LNCDEPILSNKSGD-NRGKFKVESFRKKYHLGAPVAG-TCFQAEWDDSVPKLHDQL 184 ++ E + + F+ F KK+ AG + FQ WDDSV + QL Sbjct: 279 IDFSEDARPSPCYQLAQRTFRTFDFYKKHQETMTPAGLSFFQCRWDDSVTYIFHQL 334 >5MRC-1 nrPDB Length = 348 Score = 124 bits (310), Expect = 3e-29, Method: Composition-based stats. Identities = 35/143 (24%), Positives = 66/143 (46%), Gaps = 28/143 (19%) Query: 60 PGKLYTLVLTDPDAPSRKDPKFRE--WHHFLVVNMKGND-------ISSGTVLSEYVGSG 110 +LYT+++ +PD P + F+ + + +N+ ND S ++++Y+ Sbjct: 201 EKQLYTVLIVNPDVPDLSNDSFKTALCYGLVNINLTYNDNLIDPRKFHSSNIIADYLPPV 260 Query: 111 PPKDTGLHRYVWLVYEQEQPLNCDEPILSNKSGDN----------RGKFKVESFRKKYHL 160 P K+ G R+V V+ Q P++ +K G N R F + F KKY+L Sbjct: 261 PEKNAGKQRFVVWVFRQ--------PLIEDKQGPNMLEIDRKELSRDDFDIRQFTKKYNL 312 Query: 161 GAPVAGTCFQAEWDDSVPKLHDQ 183 A + +++EWD V + ++ Sbjct: 313 TA-IGAHIWRSEWDAKVAAVREK 334 >2R77-A nrPDB Length = 205 Score = 116 bits (290), Expect = 7e-27, Method: Composition-based stats. Identities = 38/133 (28%), Positives = 57/133 (42%), Gaps = 10/133 (7%) Query: 30 GGVTVDELGKVLTPTQVMNRPSSISWDGLDP-GKLYTLVLTDPDAPSRKDPKFREWHHFL 88 G V G VL + P +I + P G + L + DPD PSR P +E+ H++ Sbjct: 52 AGKEV-NHGNVLDIAGTGSVPRNIKFSEEPPDGYCFVLFMVDPDYPSRLRPDGKEYIHWV 110 Query: 89 VVNMKGNDISSGT-----VLSEYVGSGPPKDTGLHRYVW---LVYEQEQPLNCDEPILSN 140 V +K ++ GT + YVG K TGLHR + L+ E+++ P Sbjct: 111 VSGIKTKELIKGTQKNCVTILPYVGPSIKKGTGLHRISFIISLIKEEDKDNITGLPHYKG 170 Query: 141 KSGDNRGKFKVES 153 + R KF Sbjct: 171 EKYITRVKFNNYE 183 >1WPX-B nrPDB Length = 220 Score = 91.4 bits (225), Expect = 2e-19, Method: Composition-based stats. Identities = 49/195 (25%), Positives = 81/195 (41%), Gaps = 38/195 (19%) Query: 14 LQEVDEPPQHALRVDYGGVTVDELGKVLTPTQVMNRPS-SISWDGLDPGK---------- 62 + + P L V+Y +G L + ++P +++ Sbjct: 26 IHDTSFQPSGILAVEYSSSAPVAMGNTLPTEKARSKPQFQFTFNKQMQKSVPQANAYVPQ 85 Query: 63 ---LYTLVLTDPDAPSRKDPKFREWHHFL-----VVNMKGNDISSGT------------- 101 L+TLV+TDPDAPS+ D K+ E+ H + ++N ++ S T Sbjct: 86 DDDLFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGATEFFASEFNTKGSN 145 Query: 102 VLSEYVGSGPPKDTGLHRYVWLVYEQEQPLNCDE----PILSNKSGDNRGKFKVESFRKK 157 L EY+G PPK +G HRYV+L+Y+Q + ++ + N V + K+ Sbjct: 146 TLIEYMGPAPPKGSGPHRYVFLLYKQPKGVDSSKFSKIKDRPNWGYGTPAT-GVGKWAKE 204 Query: 158 YHLGAPVAGTCFQAE 172 +L VA F AE Sbjct: 205 NNLQL-VASNFFYAE 218 >6HIV-Ab nrPDB Length = 507 Score = 44.4 bits (103), Expect = 3e-05, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 52/133 (39%), Gaps = 18/133 (13%) Query: 67 VLTDPDAPSRKDPKFREWHHFLVVNMKGNDISSGTVLSEYVGSGPPKDTGLHRYVWLVYE 126 VL + ++ R++ + R+ LV N G V+ Y P +D G R++ ++++ Sbjct: 292 VLEEYESEQRQNNQKRQHLEELVRN-PAPIAKEGDVIVSYTPPLPTEDAGTTRHICMLFK 350 Query: 127 QEQPLNCDEPILSNK--SGDNRGKFKVE------------SFRKKYHLGAPV---AGTCF 169 Q ++ L + S R F++ + P A T F Sbjct: 351 QRSYVSGASCALDDSKASFAARANFRLHAQHRDGIPSSSVEMLSRIEQVLPPDPSAVTFF 410 Query: 170 QAEWDDSVPKLHD 182 Q +WD V + ++ Sbjct: 411 QTKWDIQVQEFYE 423 >1FUX-A nrPDB Length = 166 Score = 42.4 bits (98), Expect = 1e-04, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 52/141 (36%), Gaps = 30/141 (21%) Query: 47 MNRPSSISWDGLDPG-KLYTLVLTDPDAPSRKDPKFREWHHFLVVNMK------------ 93 N S++W G+ G K + + + DPDAP+ W H+ VVN+ Sbjct: 30 GNTSPSLTWSGVPEGTKSFAVTVYDPDAPTGSG-----WWHWTVVNIPATVTYLPVDAGR 84 Query: 94 --GNDISSGTV-------LSEYVGSGPPKDTGLHRY---VWLVYEQEQPLNCDEPILSNK 141 G + +G V + + G+ PPK H Y VW + ++ P++ + Sbjct: 85 RDGTKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVWALKTEKIPVDSNSSGALVG 144 Query: 142 SGDNRGKFKVESFRKKYHLGA 162 N K Y + Sbjct: 145 YMLNANKIATAEITPVYEIKL 165 >4BEG-A nrPDB Length = 178 Score = 40.9 bits (94), Expect = 3e-04, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 42/115 (36%), Gaps = 26/115 (22%) Query: 52 SISWDGLD-PGKLYTLVLTDPDAPSRKDPKFREWHHFLVVNMKGNDISSGTVLSE----- 105 + W G + + + + DPDAP+ + H+ V N+ N + + Sbjct: 51 QLRWSGFPSETRSFAVTVYDPDAPTLSG-----FWHWAVANLPANVTELPEGVGDGRELP 105 Query: 106 --------------YVGSGPPKDTGLHRYVWLVYE-QEQPLNCDEPILSNKSGDN 145 YVG+ PP G+HRY V+ + + L+ E G N Sbjct: 106 GGALTLVNDAGMRRYVGAAPPPGHGVHRYYVAVHAVKVEKLDLPEDASPAYLGFN 160 >3EYB-A nrPDB Length = 219 Score = 30.5 bits (67), Expect = 0.47, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 20/40 (50%) Query: 44 TQVMNRPSSISWDGLDPGKLYTLVLTDPDAPSRKDPKFRE 83 T+++ + + D + G L +VL +PDA DP E Sbjct: 115 TELVAKMRDMKMDKTELGCLRAIVLFNPDAKGLTDPSLVE 154 >1TOH-A nrPDB Length = 343 Score = 30.1 bits (66), Expect = 0.66, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 1/82 (1%) Query: 105 EYVGSGPPKDTGLHRYVWLVYEQEQPLNCDEPILSNKSGDNRGKFKVESFRKKYHLGAPV 164 + V P K + L + LV + + L+ D P S++ R K + +Y G P+ Sbjct: 7 DKVPWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKL-IAEIAFQYKHGEPI 65 Query: 165 AGTCFQAEWDDSVPKLHDQLAG 186 + AE + +++ L G Sbjct: 66 PHVEYTAEEIATWKEVYVTLKG 87 >2XSN-A nrPDB Length = 343 Score = 29.7 bits (65), Expect = 0.68, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 1/80 (1%) Query: 107 VGSGPPKDTGLHRYVWLVYEQEQPLNCDEPILSNKSGDNRGKFKVESFRKKYHLGAPVAG 166 V P K + L + LV + + L+ D P S++ R K + +Y G P+ Sbjct: 2 VPWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKL-IAEIAFQYRHGDPIPR 60 Query: 167 TCFQAEWDDSVPKLHDQLAG 186 + AE + +++ L G Sbjct: 61 VEYTAEEIATWKEVYTTLKG 80 >5KYA-B nrPDB Length = 256 Score = 29.7 bits (65), Expect = 0.71, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 2/65 (3%) Query: 23 HALRVDYGGVTVDELGKVLT--PTQVMNRPSSISWDGLDPGKLYTLVLTDPDAPSRKDPK 80 L V +G + T+++++ + D + G L ++L +PDA +P Sbjct: 108 TGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPS 167 Query: 81 FREWH 85 E Sbjct: 168 EVEVL 172 >1H9U-A nrPDB Length = 224 Score = 29.7 bits (65), Expect = 0.71, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 2/65 (3%) Query: 23 HALRVDYGGVTVDELGKVLT--PTQVMNRPSSISWDGLDPGKLYTLVLTDPDAPSRKDPK 80 L V +G + T+++++ + D + G L ++L +PDA +P Sbjct: 101 TGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPS 160 Query: 81 FREWH 85 E Sbjct: 161 EVEVL 165 >2GL8-A nrPDB Length = 241 Score = 29.0 bits (63), Expect = 1.4, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 2/63 (3%) Query: 23 HALRVDYGGVTVDELGKVLT--PTQVMNRPSSISWDGLDPGKLYTLVLTDPDAPSRKDPK 80 L V +G + T+++++ + D + G L +VL +PDA +P Sbjct: 107 TGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDKSELGCLRAIVLFNPDAKGLSNPS 166 Query: 81 FRE 83 E Sbjct: 167 EVE 169 >3Q2V-A nrPDB Length = 550 Score = 27.8 bits (60), Expect = 2.6, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 27/57 (47%), Gaps = 3/57 (5%) Query: 50 PSSISWDGLDPGKLYTLVLTDPDAPSRKDPKFREWHHFLVVN--MKGNDISSGTVLS 104 P ++ + +P + + + + DPD P P E H VN ++ ND + +++ Sbjct: 443 PRNMQFCQRNP-QPHIITILDPDLPPNTSPFTAELTHGASVNWTIEYNDAAQESLIL 498 >4M4V-A nrPDB Length = 422 Score = 27.4 bits (59), Expect = 3.6, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 22/50 (44%), Gaps = 2/50 (4%) Query: 8 WAGPLSLQEVDEPPQHALRVDYGGVTVDELGKVLTPTQVMNRPSSISWDG 57 W P + VD+ L + + G T + GK + P + + +W+G Sbjct: 138 WGNPTPV--VDDDNTIYLFLSWNGATYSQNGKDVLPDGTVTKKIDSTWEG 185 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.305 0.126 0.343 Lambda K H 0.267 0.0386 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,487,769 Number of Sequences: 36641 Number of extensions: 285694 Number of successful extensions: 557 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 37 Number of HSP's successfully gapped in prelim test: 14 Number of HSP's that attempted gapping in prelim test: 480 Number of HSP's gapped (non-prelim): 54 length of query: 187 length of database: 10,336,785 effective HSP length: 91 effective length of query: 96 effective length of database: 7,002,454 effective search space: 672235584 effective search space used: 672235584 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.4 bits) S2: 56 (26.3 bits)