BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= P30419
         (496 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

1RXT-A nrPDB                                                         1038   0.0  
6FZ3-A nrPDB                                                          803   0.0  
4C2X-A nrPDB                                                          699   0.0  
6B1L-A nrPDB                                                          439   e-123
5T6E-A nrPDB                                                          367   e-102
5AG6-A nrPDB                                                          354   4e-98
2P6F-A nrPDB                                                          338   5e-93
1IYL-A nrPDB                                                          327   7e-90
6D72-A nrPDB                                                           29   4.0  
3WSY-A nrPDB                                                           29   5.8  

>1RXT-A nrPDB
          Length = 496

 Score = 1038 bits (2684), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 495/496 (99%), Positives = 496/496 (100%)

Query: 1   MADESETAVKPPAPPLPQMMEGNGNGHEHCSDCENEEDNSYNRGGLSPANDTGAKKKKKK 60
           MADESETAVKPPAPPLPQMMEGNGNGHEHCSDCENEEDNSYNRGGLSPANDTGAKKKKKK
Sbjct: 1   MADESETAVKPPAPPLPQMMEGNGNGHEHCSDCENEEDNSYNRGGLSPANDTGAKKKKKK 60

Query: 61  QKKKKEKGSETDSAQDQPVKMNSLPAERIQEIQKAIELFSVGQGPAKTMEEASKRSYQFW 120
           QKKKKEKGSETDSAQDQPVKMNSLPAERIQEIQKAIELFSVGQGPAKTMEEASKRSYQFW
Sbjct: 61  QKKKKEKGSETDSAQDQPVKMNSLPAERIQEIQKAIELFSVGQGPAKTMEEASKRSYQFW 120

Query: 121 DTQPVPKLGEVVNTHGPVEPDKDNIRQEPYTLPQGFTWDALDLGDRGVLKELYTLLNENY 180
           DTQPVPKLGEVVNTHGPVEPDKDNIRQEPYTLPQGFTWDALDLGDRGVLKELYTLLNENY
Sbjct: 121 DTQPVPKLGEVVNTHGPVEPDKDNIRQEPYTLPQGFTWDALDLGDRGVLKELYTLLNENY 180

Query: 181 VEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTEK 240
           VEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTEK
Sbjct: 181 VEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTEK 240

Query: 241 KMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHRS 300
           KMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHRS
Sbjct: 241 KMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHRS 300

Query: 301 LNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLTRYLKQF 360
           LNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLTRYLKQF
Sbjct: 301 LNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLTRYLKQF 360

Query: 361 HLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKSLKAAY 420
           HLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKSLKAAY
Sbjct: 361 HLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKSLKAAY 420

Query: 421 SFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYN 480
           SFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYN
Sbjct: 421 SFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYN 480

Query: 481 WKCPSMGAEKVGLVLQ 496
           WKCPSMGAEKVG+VLQ
Sbjct: 481 WKCPSMGAEKVGIVLQ 496


>6FZ3-A nrPDB
          Length = 403

 Score =  803 bits (2074), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/382 (100%), Positives = 382/382 (100%)

Query: 115 RSYQFWDTQPVPKLGEVVNTHGPVEPDKDNIRQEPYTLPQGFTWDALDLGDRGVLKELYT 174
           RSYQFWDTQPVPKLGEVVNTHGPVEPDKDNIRQEPYTLPQGFTWDALDLGDRGVLKELYT
Sbjct: 22  RSYQFWDTQPVPKLGEVVNTHGPVEPDKDNIRQEPYTLPQGFTWDALDLGDRGVLKELYT 81

Query: 175 LLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIH 234
           LLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIH
Sbjct: 82  LLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIH 141

Query: 235 IYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTC 294
           IYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTC
Sbjct: 142 IYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTC 201

Query: 295 RYWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLT 354
           RYWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLT
Sbjct: 202 RYWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLT 261

Query: 355 RYLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHK 414
           RYLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHK
Sbjct: 262 RYLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHK 321

Query: 415 SLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNL 474
           SLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNL
Sbjct: 322 SLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNL 381

Query: 475 QYYLYNWKCPSMGAEKVGLVLQ 496
           QYYLYNWKCPSMGAEKVGLVLQ
Sbjct: 382 QYYLYNWKCPSMGAEKVGLVLQ 403


>4C2X-A nrPDB
          Length = 410

 Score =  699 bits (1804), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/394 (82%), Positives = 358/394 (90%), Gaps = 2/394 (0%)

Query: 103 QGPAKTMEEASKRSYQFWDTQPVPKLGEVVNTHGPVEPDKDNIRQEPYTLPQGFTWDALD 162
           QGP   M+EA+K  YQFWDTQPVPKL EV+ +HG +EPDKDN+RQEPY+LPQGF WD LD
Sbjct: 19  QGPH--MDEAAKHRYQFWDTQPVPKLDEVITSHGAIEPDKDNVRQEPYSLPQGFMWDTLD 76

Query: 163 LGDRGVLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKL 222
           L D  VLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWL QWHCGVRV S++KL
Sbjct: 77  LSDAEVLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLLQWHCGVRVSSNKKL 136

Query: 223 VGFISAIPANIHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYT 282
           VGFISAIPANI IYD+ KKMVEINFLCVHKKLRSKRVAPVLIREITRRV+LEGIFQAVYT
Sbjct: 137 VGFISAIPANIRIYDSVKKMVEINFLCVHKKLRSKRVAPVLIREITRRVNLEGIFQAVYT 196

Query: 283 AGVVLPKPVGTCRYWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPME 342
           AGVVLPKP+ TCRYWHRSLNP+KL+EVKFSHLSRNMT+QRTMKLYRLP+  KT+GLRPME
Sbjct: 197 AGVVLPKPIATCRYWHRSLNPKKLVEVKFSHLSRNMTLQRTMKLYRLPDVTKTSGLRPME 256

Query: 343 TKDIPVVHQLLTRYLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYT 402
            KDI  V +L+  YLKQFHL PVM +EEV HWF P+E+IIDTFVVE+ NG++TDFLSFYT
Sbjct: 257 PKDIKSVRELINTYLKQFHLAPVMDEEEVAHWFLPREHIIDTFVVESPNGKLTDFLSFYT 316

Query: 403 LPSTIMNHPTHKSLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFL 462
           LPST+M+HP HKSLKAAYSFYN+HT+TPLLDLMSDAL+LAK KGFDVFNALDLMENKTFL
Sbjct: 317 LPSTVMHHPAHKSLKAAYSFYNIHTETPLLDLMSDALILAKSKGFDVFNALDLMENKTFL 376

Query: 463 EKLKFGIGDGNLQYYLYNWKCPSMGAEKVGLVLQ 496
           EKLKFGIGDGNLQYYLYNW+CP   +EKVGLVLQ
Sbjct: 377 EKLKFGIGDGNLQYYLYNWRCPGTDSEKVGLVLQ 410


>6B1L-A nrPDB
          Length = 405

 Score =  439 bits (1129), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 209/383 (54%), Positives = 275/383 (71%), Gaps = 5/383 (1%)

Query: 117 YQFWDTQPVPKLGEVVN--THGPVEPDK--DNIRQEPYTLPQGFTWDALDLGDRGVLKEL 172
           Y+FW TQPVPK+ +  N   + P   D   +++R++ Y LP G++W   D+ D     E+
Sbjct: 23  YKFWYTQPVPKINDEFNESVNEPFISDNKVEDVRKDEYKLPPGYSWYVCDVKDEKDRSEI 82

Query: 173 YTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPAN 232
           YTLL +NYVEDDDN+FRF+YS EFLLWAL  P +L  WH GV+  +S KL+GFISAIP +
Sbjct: 83  YTLLTDNYVEDDDNIFRFNYSAEFLLWALTSPNYLKTWHIGVKYDASNKLIGFISAIPTD 142

Query: 233 IHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVG 292
           I I+    KM E+NFLCVHK LRSKR+APVLI+EITRR++LE I+QA+YTAGV LPKPV 
Sbjct: 143 ICIHKRTIKMAEVNFLCVHKTLRSKRLAPVLIKEITRRINLENIWQAIYTAGVYLPKPVS 202

Query: 293 TCRYWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQL 352
             RY+HRS+N +KLIE+ FS L+  +TM R +KLYR+ +T     +R M+ KD+  VH+L
Sbjct: 203 DARYYHRSINVKKLIEIGFSSLNSRLTMSRAIKLYRVEDTLNIKNMRLMKKKDVEGVHKL 262

Query: 353 LTRYLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPT 412
           L  YL+QF+L  V ++EE+ HWF P EN+I T+V E  NG++ D +SFY+LPS I+ +  
Sbjct: 263 LGSYLEQFNLYAVFTKEEIAHWFLPIENVIYTYVNEE-NGKIKDMISFYSLPSQILGNDK 321

Query: 413 HKSLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDG 472
           + +L AAYSFYNV T      LM DA++LAK   FDVFNAL++M+NK+  E LKFG GDG
Sbjct: 322 YSTLNAAYSFYNVTTTATFKQLMQDAILLAKRNNFDVFNALEVMQNKSVFEDLKFGEGDG 381

Query: 473 NLQYYLYNWKCPSMGAEKVGLVL 495
           +L+YYLYNWKC S     VG+VL
Sbjct: 382 SLKYYLYNWKCASFAPAHVGIVL 404


>5T6E-A nrPDB
          Length = 411

 Score =  367 bits (942), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 193/380 (50%), Positives = 249/380 (65%), Gaps = 20/380 (5%)

Query: 122 TQPVPKLGEV-VNTHGPVEP-DKDNIRQEPYTLPQGFTWDALDLGDRGVLKELYTLLNEN 179
           TQPVP+  E   +T GP++  D + + +EP  L +GF W  LDL +   L+EL+ LL  +
Sbjct: 6   TQPVPRFDETSTDTGGPIKIIDPEKVSKEPDALLEGFEWATLDLTNETELQELWDLLTYH 65

Query: 180 YVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTE 239
           YVEDD+ MFRF YS  FL WAL  PGW  +WH GVR   SRKLV  I  +P  I++ + +
Sbjct: 66  YVEDDNAMFRFRYSQSFLHWALMSPGWKKEWHVGVRATKSRKLVASICGVPTEINVRNQK 125

Query: 240 KKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHR 299
            K+VEINFLC+HKKLRSKR+ PVLI+EITRR +L GI+QA+YTAGVVLP PV +CRY+HR
Sbjct: 126 LKVVEINFLCIHKKLRSKRLTPVLIKEITRRCYLNGIYQAIYTAGVVLPTPVSSCRYYHR 185

Query: 300 SLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLTRYLKQ 359
            L+  KL EV FS L    T  R +    LP T  T GLRPME KDI  VH LL RYL +
Sbjct: 186 PLDWLKLYEVGFSPLPAGSTKARQITKNHLPSTTSTPGLRPMEPKDIDTVHDLLQRYLSR 245

Query: 360 FHLTPVMSQEEVEHWFY-----PQENIIDTFVVEN-ANGEVTDFLSFYTLPSTIMNHPTH 413
           F L    ++EEV+HW        +E ++  +VVE+    ++TDF SFY L ST++ +P H
Sbjct: 246 FALNQAFTREEVDHWLVHKPETVKEQVVWAYVVEDPETHKITDFFSFYNLESTVIQNPKH 305

Query: 414 KSLKAAYSFYNVHTQTP-----------LLDLMSDALVLAKMKGFDVFNALDLMENKTFL 462
            +++AAY +Y   T+T            LL LM+DAL+LAK   FDVFNAL L +N  FL
Sbjct: 306 DNVRAAYLYYYA-TETAFTNNMKALKERLLMLMNDALILAKKAHFDVFNALTLHDNPLFL 364

Query: 463 EKLKFGIGDGNLQYYLYNWK 482
           E+LKFG GDG L +YLYN++
Sbjct: 365 EQLKFGAGDGQLHFYLYNYR 384


>5AG6-A nrPDB
          Length = 438

 Score =  354 bits (909), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 178/424 (41%), Positives = 263/424 (62%), Gaps = 37/424 (8%)

Query: 103 QGPAKTMEEASKRSYQFWDTQPVPKL---GEVVNTHGPVEPDKD--NIRQEPYTLPQGFT 157
           QGP+      S  ++ FW TQPVP+     E +   GP++  K   +I +EPY +   F 
Sbjct: 20  QGPSN-----SDAAHAFWSTQPVPQTEDETEKIVFAGPMDEPKTVADIPEEPYPIASTFE 74

Query: 158 WDALDLGDRGVLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVV 217
           W   ++     +  +Y LL +NYVEDDD+MFRF+YS EFL WAL PP ++P WH  VR  
Sbjct: 75  WWTPNMEAADDIHAIYELLRDNYVEDDDSMFRFNYSEEFLQWALCPPNYIPDWHVAVRRK 134

Query: 218 SSRKLVGFISAIPANIHI---------------------YDTEKKMVEINFLCVHKKLRS 256
           + +KL+ FI+ +P  + +                     YD  + + EINFLCVHK+LR 
Sbjct: 135 ADKKLLAFIAGVPVTLRMGTPKYMKVKAQEKGEGEEAAKYDEPRHICEINFLCVHKQLRE 194

Query: 257 KRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHRSLNPRKLIEVKFSHL-S 315
           KR+AP+LI+E TRRV+   ++QAVYTAGV+LP P  + +Y+HRSLNP KL+E++FS + +
Sbjct: 195 KRLAPILIKEATRRVNRTNVWQAVYTAGVLLPTPYASGQYFHRSLNPEKLVEIRFSGIPA 254

Query: 316 RNMTMQRTMKL----YRLPETPKTAGLRPMETKDIPVVHQLLTRYLKQFHLTPVMSQEEV 371
           +    Q  M +    Y+LP  PK +GLR M+  D+P V ++L  YL  F + PV S  E+
Sbjct: 255 QYQKFQNPMAMLKRNYQLPSAPKNSGLREMKPSDVPQVRRILMNYLDSFDVGPVFSDAEI 314

Query: 372 EHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKSLKAAYSFYNVHTQTPL 431
            H+  P++ ++ T+VVEN + +VTDF SFY +PST++ +  +  L AAY  Y   T  PL
Sbjct: 315 SHYLLPRDGVVFTYVVEN-DKKVTDFFSFYRIPSTVIGNSNYNLLNAAYVHYYAATSIPL 373

Query: 432 LDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYNWKCPSMGAEKV 491
             L+ D L++A  +GFDV N +++++N++F+E+LKFG GDG+L+YY YNW  P +   +V
Sbjct: 374 HQLILDLLIVAHSRGFDVCNMVEILDNRSFVEQLKFGAGDGHLRYYFYNWAYPKIKPSQV 433

Query: 492 GLVL 495
            LV+
Sbjct: 434 ALVM 437


>2P6F-A nrPDB
          Length = 455

 Score =  338 bits (866), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 176/399 (44%), Positives = 246/399 (61%), Gaps = 25/399 (6%)

Query: 110 EEASKRSYQFWDTQPVPKLGEVVNTHGPVEPDK--DNIRQEPYTLPQGFTWDALDLGDRG 167
           ++ + + ++FW TQPV    E V   GP++  K  ++I  +P  L   F W ++D+ ++ 
Sbjct: 31  QKKAMKDHKFWRTQPVKDFDEKVVEEGPIDKPKTPEDISDKPLPLLSSFEWCSIDVDNKK 90

Query: 168 VLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFIS 227
            L++++ LLNENYVED D  FRF+Y+ EF  WAL+ PGW   WH GVRV  ++KLV FIS
Sbjct: 91  QLEDVFVLLNENYVEDRDAGFRFNYTKEFFNWALKSPGWKKDWHIGVRVKETQKLVAFIS 150

Query: 228 AIPANIHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVL 287
           AIP  + +   +   VEINFLCVHK+LRSKR+ PVLI+EITRRV+   I+ A+YTAG+VL
Sbjct: 151 AIPVTLGVRGKQVPSVEINFLCVHKQLRSKRLTPVLIKEITRRVNKCDIWHALYTAGIVL 210

Query: 288 PKPVGTCRYWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIP 347
           P PV TCRY HR LN +KL EV F+ L    T +  +    LP   KTAGLR ++ +DI 
Sbjct: 211 PAPVSTCRYTHRPLNWKKLYEVDFTGLPDGHTEEDMIAENALPAKTKTAGLRKLKKEDID 270

Query: 348 VVHQLLTRYLKQFHLTPVMSQEEVEHWFYPQEN------IIDTFVVENANGEVTDFLSFY 401
            V +L  RY  +F L  + ++EE EH F  +E+      +I ++VVE  +G++TDF SFY
Sbjct: 271 QVFELFKRYQSRFELIQIFTKEEFEHNFIGEESLPLDKQVIFSYVVEQPDGKITDFFSFY 330

Query: 402 TLPSTIMNHPTHKSLKAAYSFYNV-----------------HTQTPLLDLMSDALVLAKM 444
           +LP TI+N+  +K L   Y +Y                     +T L +L+ DA +LAK 
Sbjct: 331 SLPFTILNNTKYKDLGIGYLYYYATDADFQFKDRFDPKATKALKTRLCELIYDACILAKN 390

Query: 445 KGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYNWKC 483
              DVFNAL   +N  FL+ LKFG GDG L +YL+N++ 
Sbjct: 391 ANMDVFNALTSQDNTLFLDDLKFGPGDGFLNFYLFNYRA 429


>1IYL-A nrPDB
          Length = 392

 Score =  327 bits (838), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 168/369 (45%), Positives = 229/369 (62%), Gaps = 16/369 (4%)

Query: 136 GPVEPDK--DNIRQEPYTLPQGFTWDALDLGDRGVLKELYTLLNENYVEDDDNMFRFDYS 193
           GP++  K  +++  +P  L   F W  LD+ D   L ELY LL +NYVED D  FRF YS
Sbjct: 2   GPIDKLKTPEDVPNDPLPLISDFEWSTLDIDDNLQLDELYKLLYDNYVEDIDATFRFKYS 61

Query: 194 PEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTEKKM--VEINFLCVH 251
            EF  WAL+PPGW   WH GVRV S+ KLV FI+A P    +  + K +  VEINFLC+H
Sbjct: 62  HEFFQWALKPPGWRKDWHVGVRVKSTGKLVAFIAATPVTFKLNKSNKVIDSVEINFLCIH 121

Query: 252 KKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHRSLNPRKLIEVKF 311
           KKLR+KR+APVLI+EITRRV+ + I+QA+YT G +LP P+ TCRY HR +N  KL +V F
Sbjct: 122 KKLRNKRLAPVLIKEITRRVNKQNIWQALYTGGSILPTPLTTCRYQHRPINWSKLHDVGF 181

Query: 312 SHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLTRYLKQFHLTPVMSQEEV 371
           SHL  N T    +  Y LP  PK  GLRPM  KD+  V  LL +Y ++F +  + ++EE 
Sbjct: 182 SHLPPNQTKSSMVASYTLPNNPKLKGLRPMTGKDVSTVLSLLYKYQERFDIVQLFTEEEF 241

Query: 372 EHWFYPQE-----NIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKSLKAAYSFYNV- 425
           +HW    +     N++ ++VVE+ NG +TD+ S+Y LP T++++  H  L  AY FY   
Sbjct: 242 KHWMLGHDENSDSNVVKSYVVEDENGIITDYFSYYLLPFTVLDNAQHDELGIAYLFYYAS 301

Query: 426 ------HTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLY 479
                 + +  L +L++DAL+ +K  G DVFN L   +N  FL+  KFG GDG L YYL+
Sbjct: 302 DSFEKPNYKKRLNELITDALITSKKFGVDVFNCLTCQDNTYFLKDCKFGSGDGFLNYYLF 361

Query: 480 NWKCPSMGA 488
           N++   M  
Sbjct: 362 NYRTFPMDG 370


>6D72-A nrPDB
          Length = 184

 Score = 29.3 bits (64), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 11/21 (52%), Positives = 15/21 (71%)

Query: 332 TPKTAGLRPMETKDIPVVHQL 352
           T  +  LRP+E +D+P VHQL
Sbjct: 6   TTSSVRLRPLEREDLPFVHQL 26


>3WSY-A nrPDB
          Length = 678

 Score = 28.9 bits (63), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)

Query: 431 LLDLMSDALVLAKMKGFDVFNALDLMEN-KTFLEKLKFGIGD 471
           ++ L  D+L LA+ K  DV+ + D  ++ K   +KL FG+G+
Sbjct: 33  IVALARDSLALARPKSSDVYVSYDYGKSFKKISDKLNFGLGN 74


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

1RXT-A nrPDB                                                          942   0.0  
6FZ3-A nrPDB                                                          709   0.0  
4C2X-A nrPDB                                                          703   0.0  
6B1L-A nrPDB                                                          611   e-175
2P6F-A nrPDB                                                          598   e-171
5AG6-A nrPDB                                                          598   e-171
5T6E-A nrPDB                                                          581   e-166
1IYL-A nrPDB                                                          570   e-163

Sequences not found previously or not previously below threshold:

1VHS-A nrPDB                                                           35   0.11 
1Z5X-E nrPDB                                                           33   0.31 
2CJU-H nrPDB                                                           32   0.51 
2FAU-A nrPDB                                                           32   0.60 
6CV9-A nrPDB                                                           31   1.2  
1QB4-A nrPDB                                                           31   1.4  
2G1D-A nrPDB                                                           30   1.8  
6C95-D nrPDB                                                           30   2.3  
1Z5X-U nrPDB                                                           30   2.6  
4PF1-A nrPDB                                                           30   2.9  
2JES-A nrPDB                                                           29   5.4  


CONVERGED!
>1RXT-A nrPDB
          Length = 496

 Score =  942 bits (2434), Expect = 0.0,   Method: Composition-based stats.
 Identities = 495/496 (99%), Positives = 496/496 (100%)

Query: 1   MADESETAVKPPAPPLPQMMEGNGNGHEHCSDCENEEDNSYNRGGLSPANDTGAKKKKKK 60
           MADESETAVKPPAPPLPQMMEGNGNGHEHCSDCENEEDNSYNRGGLSPANDTGAKKKKKK
Sbjct: 1   MADESETAVKPPAPPLPQMMEGNGNGHEHCSDCENEEDNSYNRGGLSPANDTGAKKKKKK 60

Query: 61  QKKKKEKGSETDSAQDQPVKMNSLPAERIQEIQKAIELFSVGQGPAKTMEEASKRSYQFW 120
           QKKKKEKGSETDSAQDQPVKMNSLPAERIQEIQKAIELFSVGQGPAKTMEEASKRSYQFW
Sbjct: 61  QKKKKEKGSETDSAQDQPVKMNSLPAERIQEIQKAIELFSVGQGPAKTMEEASKRSYQFW 120

Query: 121 DTQPVPKLGEVVNTHGPVEPDKDNIRQEPYTLPQGFTWDALDLGDRGVLKELYTLLNENY 180
           DTQPVPKLGEVVNTHGPVEPDKDNIRQEPYTLPQGFTWDALDLGDRGVLKELYTLLNENY
Sbjct: 121 DTQPVPKLGEVVNTHGPVEPDKDNIRQEPYTLPQGFTWDALDLGDRGVLKELYTLLNENY 180

Query: 181 VEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTEK 240
           VEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTEK
Sbjct: 181 VEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTEK 240

Query: 241 KMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHRS 300
           KMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHRS
Sbjct: 241 KMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHRS 300

Query: 301 LNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLTRYLKQF 360
           LNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLTRYLKQF
Sbjct: 301 LNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLTRYLKQF 360

Query: 361 HLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKSLKAAY 420
           HLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKSLKAAY
Sbjct: 361 HLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKSLKAAY 420

Query: 421 SFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYN 480
           SFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYN
Sbjct: 421 SFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYN 480

Query: 481 WKCPSMGAEKVGLVLQ 496
           WKCPSMGAEKVG+VLQ
Sbjct: 481 WKCPSMGAEKVGIVLQ 496


>6FZ3-A nrPDB
          Length = 403

 Score =  709 bits (1830), Expect = 0.0,   Method: Composition-based stats.
 Identities = 382/382 (100%), Positives = 382/382 (100%)

Query: 115 RSYQFWDTQPVPKLGEVVNTHGPVEPDKDNIRQEPYTLPQGFTWDALDLGDRGVLKELYT 174
           RSYQFWDTQPVPKLGEVVNTHGPVEPDKDNIRQEPYTLPQGFTWDALDLGDRGVLKELYT
Sbjct: 22  RSYQFWDTQPVPKLGEVVNTHGPVEPDKDNIRQEPYTLPQGFTWDALDLGDRGVLKELYT 81

Query: 175 LLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIH 234
           LLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIH
Sbjct: 82  LLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIH 141

Query: 235 IYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTC 294
           IYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTC
Sbjct: 142 IYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTC 201

Query: 295 RYWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLT 354
           RYWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLT
Sbjct: 202 RYWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLT 261

Query: 355 RYLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHK 414
           RYLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHK
Sbjct: 262 RYLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHK 321

Query: 415 SLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNL 474
           SLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNL
Sbjct: 322 SLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNL 381

Query: 475 QYYLYNWKCPSMGAEKVGLVLQ 496
           QYYLYNWKCPSMGAEKVGLVLQ
Sbjct: 382 QYYLYNWKCPSMGAEKVGLVLQ 403


>4C2X-A nrPDB
          Length = 410

 Score =  703 bits (1814), Expect = 0.0,   Method: Composition-based stats.
 Identities = 326/394 (82%), Positives = 358/394 (90%), Gaps = 2/394 (0%)

Query: 103 QGPAKTMEEASKRSYQFWDTQPVPKLGEVVNTHGPVEPDKDNIRQEPYTLPQGFTWDALD 162
           QGP   M+EA+K  YQFWDTQPVPKL EV+ +HG +EPDKDN+RQEPY+LPQGF WD LD
Sbjct: 19  QGPH--MDEAAKHRYQFWDTQPVPKLDEVITSHGAIEPDKDNVRQEPYSLPQGFMWDTLD 76

Query: 163 LGDRGVLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKL 222
           L D  VLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWL QWHCGVRV S++KL
Sbjct: 77  LSDAEVLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLLQWHCGVRVSSNKKL 136

Query: 223 VGFISAIPANIHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYT 282
           VGFISAIPANI IYD+ KKMVEINFLCVHKKLRSKRVAPVLIREITRRV+LEGIFQAVYT
Sbjct: 137 VGFISAIPANIRIYDSVKKMVEINFLCVHKKLRSKRVAPVLIREITRRVNLEGIFQAVYT 196

Query: 283 AGVVLPKPVGTCRYWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPME 342
           AGVVLPKP+ TCRYWHRSLNP+KL+EVKFSHLSRNMT+QRTMKLYRLP+  KT+GLRPME
Sbjct: 197 AGVVLPKPIATCRYWHRSLNPKKLVEVKFSHLSRNMTLQRTMKLYRLPDVTKTSGLRPME 256

Query: 343 TKDIPVVHQLLTRYLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYT 402
            KDI  V +L+  YLKQFHL PVM +EEV HWF P+E+IIDTFVVE+ NG++TDFLSFYT
Sbjct: 257 PKDIKSVRELINTYLKQFHLAPVMDEEEVAHWFLPREHIIDTFVVESPNGKLTDFLSFYT 316

Query: 403 LPSTIMNHPTHKSLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFL 462
           LPST+M+HP HKSLKAAYSFYN+HT+TPLLDLMSDAL+LAK KGFDVFNALDLMENKTFL
Sbjct: 317 LPSTVMHHPAHKSLKAAYSFYNIHTETPLLDLMSDALILAKSKGFDVFNALDLMENKTFL 376

Query: 463 EKLKFGIGDGNLQYYLYNWKCPSMGAEKVGLVLQ 496
           EKLKFGIGDGNLQYYLYNW+CP   +EKVGLVLQ
Sbjct: 377 EKLKFGIGDGNLQYYLYNWRCPGTDSEKVGLVLQ 410


>6B1L-A nrPDB
          Length = 405

 Score =  611 bits (1575), Expect = e-175,   Method: Composition-based stats.
 Identities = 209/384 (54%), Positives = 275/384 (71%), Gaps = 5/384 (1%)

Query: 116 SYQFWDTQPVPKLGEVVNT--HGPVEPDK--DNIRQEPYTLPQGFTWDALDLGDRGVLKE 171
            Y+FW TQPVPK+ +  N   + P   D   +++R++ Y LP G++W   D+ D     E
Sbjct: 22  DYKFWYTQPVPKINDEFNESVNEPFISDNKVEDVRKDEYKLPPGYSWYVCDVKDEKDRSE 81

Query: 172 LYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPA 231
           +YTLL +NYVEDDDN+FRF+YS EFLLWAL  P +L  WH GV+  +S KL+GFISAIP 
Sbjct: 82  IYTLLTDNYVEDDDNIFRFNYSAEFLLWALTSPNYLKTWHIGVKYDASNKLIGFISAIPT 141

Query: 232 NIHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPV 291
           +I I+    KM E+NFLCVHK LRSKR+APVLI+EITRR++LE I+QA+YTAGV LPKPV
Sbjct: 142 DICIHKRTIKMAEVNFLCVHKTLRSKRLAPVLIKEITRRINLENIWQAIYTAGVYLPKPV 201

Query: 292 GTCRYWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQ 351
              RY+HRS+N +KLIE+ FS L+  +TM R +KLYR+ +T     +R M+ KD+  VH+
Sbjct: 202 SDARYYHRSINVKKLIEIGFSSLNSRLTMSRAIKLYRVEDTLNIKNMRLMKKKDVEGVHK 261

Query: 352 LLTRYLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHP 411
           LL  YL+QF+L  V ++EE+ HWF P EN+I T+V E  NG++ D +SFY+LPS I+ + 
Sbjct: 262 LLGSYLEQFNLYAVFTKEEIAHWFLPIENVIYTYVNE-ENGKIKDMISFYSLPSQILGND 320

Query: 412 THKSLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGD 471
            + +L AAYSFYNV T      LM DA++LAK   FDVFNAL++M+NK+  E LKFG GD
Sbjct: 321 KYSTLNAAYSFYNVTTTATFKQLMQDAILLAKRNNFDVFNALEVMQNKSVFEDLKFGEGD 380

Query: 472 GNLQYYLYNWKCPSMGAEKVGLVL 495
           G+L+YYLYNWKC S     VG+VL
Sbjct: 381 GSLKYYLYNWKCASFAPAHVGIVL 404


>2P6F-A nrPDB
          Length = 455

 Score =  598 bits (1543), Expect = e-171,   Method: Composition-based stats.
 Identities = 176/404 (43%), Positives = 246/404 (60%), Gaps = 25/404 (6%)

Query: 110 EEASKRSYQFWDTQPVPKLGEVVNTHGPVEPDK--DNIRQEPYTLPQGFTWDALDLGDRG 167
           ++ + + ++FW TQPV    E V   GP++  K  ++I  +P  L   F W ++D+ ++ 
Sbjct: 31  QKKAMKDHKFWRTQPVKDFDEKVVEEGPIDKPKTPEDISDKPLPLLSSFEWCSIDVDNKK 90

Query: 168 VLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFIS 227
            L++++ LLNENYVED D  FRF+Y+ EF  WAL+ PGW   WH GVRV  ++KLV FIS
Sbjct: 91  QLEDVFVLLNENYVEDRDAGFRFNYTKEFFNWALKSPGWKKDWHIGVRVKETQKLVAFIS 150

Query: 228 AIPANIHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVL 287
           AIP  + +   +   VEINFLCVHK+LRSKR+ PVLI+EITRRV+   I+ A+YTAG+VL
Sbjct: 151 AIPVTLGVRGKQVPSVEINFLCVHKQLRSKRLTPVLIKEITRRVNKCDIWHALYTAGIVL 210

Query: 288 PKPVGTCRYWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIP 347
           P PV TCRY HR LN +KL EV F+ L    T +  +    LP   KTAGLR ++ +DI 
Sbjct: 211 PAPVSTCRYTHRPLNWKKLYEVDFTGLPDGHTEEDMIAENALPAKTKTAGLRKLKKEDID 270

Query: 348 VVHQLLTRYLKQFHLTPVMSQEEVEHWFYPQE------NIIDTFVVENANGEVTDFLSFY 401
            V +L  RY  +F L  + ++EE EH F  +E       +I ++VVE  +G++TDF SFY
Sbjct: 271 QVFELFKRYQSRFELIQIFTKEEFEHNFIGEESLPLDKQVIFSYVVEQPDGKITDFFSFY 330

Query: 402 TLPSTIMNHPTHKSLKAAYSFYNV-----------------HTQTPLLDLMSDALVLAKM 444
           +LP TI+N+  +K L   Y +Y                     +T L +L+ DA +LAK 
Sbjct: 331 SLPFTILNNTKYKDLGIGYLYYYATDADFQFKDRFDPKATKALKTRLCELIYDACILAKN 390

Query: 445 KGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYNWKCPSMGA 488
              DVFNAL   +N  FL+ LKFG GDG L +YL+N++   +  
Sbjct: 391 ANMDVFNALTSQDNTLFLDDLKFGPGDGFLNFYLFNYRAKPITG 434


>5AG6-A nrPDB
          Length = 438

 Score =  598 bits (1542), Expect = e-171,   Method: Composition-based stats.
 Identities = 178/424 (41%), Positives = 262/424 (61%), Gaps = 37/424 (8%)

Query: 103 QGPAKTMEEASKRSYQFWDTQPVPKL---GEVVNTHGPVEPDKD--NIRQEPYTLPQGFT 157
           QGP+      S  ++ FW TQPVP+     E +   GP++  K   +I +EPY +   F 
Sbjct: 20  QGPSN-----SDAAHAFWSTQPVPQTEDETEKIVFAGPMDEPKTVADIPEEPYPIASTFE 74

Query: 158 WDALDLGDRGVLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVV 217
           W   ++     +  +Y LL +NYVEDDD+MFRF+YS EFL WAL PP ++P WH  VR  
Sbjct: 75  WWTPNMEAADDIHAIYELLRDNYVEDDDSMFRFNYSEEFLQWALCPPNYIPDWHVAVRRK 134

Query: 218 SSRKLVGFISAIPANIHI---------------------YDTEKKMVEINFLCVHKKLRS 256
           + +KL+ FI+ +P  + +                     YD  + + EINFLCVHK+LR 
Sbjct: 135 ADKKLLAFIAGVPVTLRMGTPKYMKVKAQEKGEGEEAAKYDEPRHICEINFLCVHKQLRE 194

Query: 257 KRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHRSLNPRKLIEVKFSHLS- 315
           KR+AP+LI+E TRRV+   ++QAVYTAGV+LP P  + +Y+HRSLNP KL+E++FS +  
Sbjct: 195 KRLAPILIKEATRRVNRTNVWQAVYTAGVLLPTPYASGQYFHRSLNPEKLVEIRFSGIPA 254

Query: 316 RNMTMQRTMKL----YRLPETPKTAGLRPMETKDIPVVHQLLTRYLKQFHLTPVMSQEEV 371
           +    Q  M +    Y+LP  PK +GLR M+  D+P V ++L  YL  F + PV S  E+
Sbjct: 255 QYQKFQNPMAMLKRNYQLPSAPKNSGLREMKPSDVPQVRRILMNYLDSFDVGPVFSDAEI 314

Query: 372 EHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKSLKAAYSFYNVHTQTPL 431
            H+  P++ ++ T+VVEN + +VTDF SFY +PST++ +  +  L AAY  Y   T  PL
Sbjct: 315 SHYLLPRDGVVFTYVVEN-DKKVTDFFSFYRIPSTVIGNSNYNLLNAAYVHYYAATSIPL 373

Query: 432 LDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYNWKCPSMGAEKV 491
             L+ D L++A  +GFDV N +++++N++F+E+LKFG GDG+L+YY YNW  P +   +V
Sbjct: 374 HQLILDLLIVAHSRGFDVCNMVEILDNRSFVEQLKFGAGDGHLRYYFYNWAYPKIKPSQV 433

Query: 492 GLVL 495
            LV+
Sbjct: 434 ALVM 437


>5T6E-A nrPDB
          Length = 411

 Score =  581 bits (1497), Expect = e-166,   Method: Composition-based stats.
 Identities = 191/385 (49%), Positives = 248/385 (64%), Gaps = 18/385 (4%)

Query: 122 TQPVPKLGEV-VNTHGPVEP-DKDNIRQEPYTLPQGFTWDALDLGDRGVLKELYTLLNEN 179
           TQPVP+  E   +T GP++  D + + +EP  L +GF W  LDL +   L+EL+ LL  +
Sbjct: 6   TQPVPRFDETSTDTGGPIKIIDPEKVSKEPDALLEGFEWATLDLTNETELQELWDLLTYH 65

Query: 180 YVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTE 239
           YVEDD+ MFRF YS  FL WAL  PGW  +WH GVR   SRKLV  I  +P  I++ + +
Sbjct: 66  YVEDDNAMFRFRYSQSFLHWALMSPGWKKEWHVGVRATKSRKLVASICGVPTEINVRNQK 125

Query: 240 KKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHR 299
            K+VEINFLC+HKKLRSKR+ PVLI+EITRR +L GI+QA+YTAGVVLP PV +CRY+HR
Sbjct: 126 LKVVEINFLCIHKKLRSKRLTPVLIKEITRRCYLNGIYQAIYTAGVVLPTPVSSCRYYHR 185

Query: 300 SLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLTRYLKQ 359
            L+  KL EV FS L    T  R +    LP T  T GLRPME KDI  VH LL RYL +
Sbjct: 186 PLDWLKLYEVGFSPLPAGSTKARQITKNHLPSTTSTPGLRPMEPKDIDTVHDLLQRYLSR 245

Query: 360 FHLTPVMSQEEVEHWFY-----PQENIIDTFVVENA-NGEVTDFLSFYTLPSTIMNHPTH 413
           F L    ++EEV+HW        +E ++  +VVE+    ++TDF SFY L ST++ +P H
Sbjct: 246 FALNQAFTREEVDHWLVHKPETVKEQVVWAYVVEDPETHKITDFFSFYNLESTVIQNPKH 305

Query: 414 KSLKAAYSFYNV----------HTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLE 463
            +++AAY +Y              +  LL LM+DAL+LAK   FDVFNAL L +N  FLE
Sbjct: 306 DNVRAAYLYYYATETAFTNNMKALKERLLMLMNDALILAKKAHFDVFNALTLHDNPLFLE 365

Query: 464 KLKFGIGDGNLQYYLYNWKCPSMGA 488
           +LKFG GDG L +YLYN++   +  
Sbjct: 366 QLKFGAGDGQLHFYLYNYRTAPVPG 390


>1IYL-A nrPDB
          Length = 392

 Score =  570 bits (1469), Expect = e-163,   Method: Composition-based stats.
 Identities = 168/370 (45%), Positives = 229/370 (61%), Gaps = 16/370 (4%)

Query: 135 HGPVEPDK--DNIRQEPYTLPQGFTWDALDLGDRGVLKELYTLLNENYVEDDDNMFRFDY 192
            GP++  K  +++  +P  L   F W  LD+ D   L ELY LL +NYVED D  FRF Y
Sbjct: 1   EGPIDKLKTPEDVPNDPLPLISDFEWSTLDIDDNLQLDELYKLLYDNYVEDIDATFRFKY 60

Query: 193 SPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTEKKM--VEINFLCV 250
           S EF  WAL+PPGW   WH GVRV S+ KLV FI+A P    +  + K +  VEINFLC+
Sbjct: 61  SHEFFQWALKPPGWRKDWHVGVRVKSTGKLVAFIAATPVTFKLNKSNKVIDSVEINFLCI 120

Query: 251 HKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHRSLNPRKLIEVK 310
           HKKLR+KR+APVLI+EITRRV+ + I+QA+YT G +LP P+ TCRY HR +N  KL +V 
Sbjct: 121 HKKLRNKRLAPVLIKEITRRVNKQNIWQALYTGGSILPTPLTTCRYQHRPINWSKLHDVG 180

Query: 311 FSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLTRYLKQFHLTPVMSQEE 370
           FSHL  N T    +  Y LP  PK  GLRPM  KD+  V  LL +Y ++F +  + ++EE
Sbjct: 181 FSHLPPNQTKSSMVASYTLPNNPKLKGLRPMTGKDVSTVLSLLYKYQERFDIVQLFTEEE 240

Query: 371 VEHWFYPQE-----NIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKSLKAAYSFYNV 425
            +HW    +     N++ ++VVE+ NG +TD+ S+Y LP T++++  H  L  AY FY  
Sbjct: 241 FKHWMLGHDENSDSNVVKSYVVEDENGIITDYFSYYLLPFTVLDNAQHDELGIAYLFYYA 300

Query: 426 -------HTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYL 478
                  + +  L +L++DAL+ +K  G DVFN L   +N  FL+  KFG GDG L YYL
Sbjct: 301 SDSFEKPNYKKRLNELITDALITSKKFGVDVFNCLTCQDNTYFLKDCKFGSGDGFLNYYL 360

Query: 479 YNWKCPSMGA 488
           +N++   M  
Sbjct: 361 FNYRTFPMDG 370


>1VHS-A nrPDB
          Length = 175

 Score = 34.6 bits (78), Expect = 0.11,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 52/149 (34%), Gaps = 16/149 (10%)

Query: 338 LRPMETKDIPVVHQLLTRYLKQFHLTP---VMSQEEVEHWFYPQENIIDTFVVENANGEV 394
           LR  E +D+  V  +    +    +T     ++ E+   WF         +V E+ NG V
Sbjct: 5   LRLAEHRDLEAVVAIYNSTIASRMVTADTEPVTPEDRMEWFSGHTESRPLYVAEDENGNV 64

Query: 395 TDFLSFYTLPSTIMNHPTHKSLKAAYSFYNVHTQTPLLD----LMSDALVLAKMKGFDVF 450
             ++SF     T    P +   K A     +            L+ +AL +A   G    
Sbjct: 65  AAWISF----ETFYGRPAYN--KTAEVSIYIDEACRGKGVGSYLLQEALRIAPNLGIRSL 118

Query: 451 NALDLMENKTFLEKLKFGIGDGNLQYYLY 479
            A     NK     LK     G  ++ L+
Sbjct: 119 MAFIFGHNK---PSLKLFEKHGFAEWGLF 144


>1Z5X-E nrPDB
          Length = 310

 Score = 33.1 bits (74), Expect = 0.31,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 11/105 (10%)

Query: 48  PANDTGAKKKKKKQKKKKEKGSETDSAQDQPVKMNSLPAERIQEIQKAIELFSV-GQGPA 106
           P      K+K+KK +K K+K + T S     +K    P    Q +    +L SV G  P 
Sbjct: 19  PEFQCAVKRKEKKAQKDKDKPNSTTSCSPDGIKQEIDP----QRLDTDSQLLSVNGVKPI 74

Query: 107 KTMEEASKRSYQFW---DTQPVPKLGEVVNTHGPVEPDKDNIRQE 148
              +E       ++      P P+  + +    P   +++N+ +E
Sbjct: 75  TPEQEELIHRLVYFQNEYEHPSPEDIKRIVNAAP---EEENVAEE 116


>2CJU-H nrPDB
          Length = 121

 Score = 32.3 bits (72), Expect = 0.51,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 27/62 (43%), Gaps = 3/62 (4%)

Query: 190 FDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTEKKMV---EIN 246
           F ++  ++ W  +PPG   +W   +R  ++     + +++     I     + +   E+N
Sbjct: 27  FTFTNYYMNWVRQPPGKALEWLVSIRNKANGYTTDYSASVKGRFTISRDNSQSILYLEMN 86

Query: 247 FL 248
            L
Sbjct: 87  NL 88


>2FAU-A nrPDB
          Length = 341

 Score = 31.9 bits (71), Expect = 0.60,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 44/109 (40%), Gaps = 7/109 (6%)

Query: 305 KLIEVKFSHL-SRNMTMQRTMKLYRLPETPKTAG----LRP-METKD-IPVVHQLLTRYL 357
           +LI+ + + +     T   T+  Y + +     G    +R  +   D  P +  +  ++ 
Sbjct: 212 QLIKKEITGIGPSTTTETETIAKYEIMDGAPVKGESIPIRLFLAGYDPTPTMRDVNKKFS 271

Query: 358 KQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPST 406
            ++ L  V+  EE   +F  QE I+     E    + T+F   +  P +
Sbjct: 272 VRYFLNLVLVDEEDRRYFKQQEIILWRKAPEKLRKQRTNFHQRFESPES 320


>6CV9-A nrPDB
          Length = 842

 Score = 31.2 bits (69), Expect = 1.2,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 58/148 (39%), Gaps = 22/148 (14%)

Query: 18  QMMEGNGNGHEHCSDCENEEDNSYNRGGLSPANDTGAKKKKKKQKKKKEKGSETDSAQDQ 77
           ++++G   G +   D E  + N   + G+S +++  +K    K +    K S T S++D 
Sbjct: 697 ELIQGQKQGFQE--DAEMNKRNEEKKFGISGSHEDLSKFSLDKNQLAHNKQSSTRSSEDY 754

Query: 78  PVKMNSLPAERIQEIQKAIELFSVGQGPAKTMEEASKRSYQFWDTQPVPKLGEVVNTHGP 137
            +   S P  + Q+I K +    V Q     +++ S                      G 
Sbjct: 755 HLNSFSNPPRQYQKIMKRLIKRYVLQA---QIDKESDE-----------------VNEGE 794

Query: 138 VEPDKDNIRQEPYTLPQGFTWDALDLGD 165
           ++  K +I    Y L +  + +  DL +
Sbjct: 795 LKEIKQDISSLRYELLEEKSQNTEDLAE 822


>1QB4-A nrPDB
          Length = 883

 Score = 30.8 bits (68), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 5/84 (5%)

Query: 215 RVVSSRKLVGFISAIPANIHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLE 274
           + V S  L   ++A P  I       KMVE+N  C+ K+L +K +A     ++ RR+  +
Sbjct: 124 KAVESLSLELVLTAHPTEITRRTLIHKMVEVN-ACL-KQLDNKDIADYEHNQLMRRL-RQ 180

Query: 275 GIFQAVYTAGV--VLPKPVGTCRY 296
            I Q+ +T  +  + P PV   ++
Sbjct: 181 LIAQSWHTDEIRKLRPSPVDEAKW 204


>2G1D-A nrPDB
          Length = 98

 Score = 30.4 bits (67), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 39/83 (46%), Gaps = 7/83 (8%)

Query: 342 ETKDIPVVHQLLTRYLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVT------ 395
           E +D P++ +   +Y+ +F  +   S+EE++      E +    V+ + N ++T      
Sbjct: 7   EKRDNPILKRKEIKYVLKFDSSRTPSREEIKELIAKHEGVDKELVIVDNNKQLTGKHEIE 66

Query: 396 DFLSFYT-LPSTIMNHPTHKSLK 417
            +   Y   PS ++  P ++ ++
Sbjct: 67  GYTKIYADKPSAMLYEPDYELIR 89


>6C95-D nrPDB
          Length = 129

 Score = 30.0 bits (66), Expect = 2.3,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 2/87 (2%)

Query: 4   ESETAVKPPAPPLPQMMEGNGNGHEHCSD-CENEEDNSYN-RGGLSPANDTGAKKKKKKQ 61
           E+ET+     P  P+  +      E  +D  E +E  S N    +S   D  ++++K KQ
Sbjct: 20  ETETSGPERPPEKPRKHDSGAADLERVTDYAEEKEIQSSNLETAMSVIGDRRSREQKAKQ 79

Query: 62  KKKKEKGSETDSAQDQPVKMNSLPAER 88
           +++KE    T   +D  + M  +   R
Sbjct: 80  EREKELAKVTIKKEDLELIMTEMEISR 106


>1Z5X-U nrPDB
          Length = 262

 Score = 30.0 bits (66), Expect = 2.6,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 25/48 (52%)

Query: 50 NDTGAKKKKKKQKKKKEKGSETDSAQDQPVKMNSLPAERIQEIQKAIE 97
          +D G K++  ++++++ K    +  +      N +P ERI E +  +E
Sbjct: 7  DDKGPKREAVQEERQRNKEKSENEVESTSNSQNDMPIERILEAELRVE 54


>4PF1-A nrPDB
          Length = 626

 Score = 29.6 bits (65), Expect = 2.9,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 5/59 (8%)

Query: 328 RLPETPKTAGLRPMETKDIPVVHQLLTRYLKQFHLTPVMSQEEVEHWFYPQENIIDTFV 386
            +PE PK  G + M + DI        RY + F +   +  ++V  +  P   +  TF+
Sbjct: 514 EVPENPKLGGYQQMLSADI-----FRGRYREDFAVAKPLVPDKVLEYRIPLPQVSHTFL 567


>2JES-A nrPDB
          Length = 503

 Score = 28.9 bits (63), Expect = 5.4,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 41/94 (43%), Gaps = 12/94 (12%)

Query: 107 KTMEEASKRSYQFWDTQPVPKLGEV-------VNTHGPVEPDKDNIRQEPYTLPQGFTWD 159
           +T++  S +  ++W     P + E              +   KDN R++     + +++ 
Sbjct: 132 ETVKNMSNKGIEYWH----PFVDEEGEFDYVIFPAEEMIVVYKDNTRRDILFALRYYSYK 187

Query: 160 ALDLGDRGVLKELYTLLNENYVEDDDNMFRFDYS 193
            + +G+     ELYT  +  Y E  D +++ DYS
Sbjct: 188 GI-MGEETQKAELYTDTHVYYYEKIDGVYQMDYS 220


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.306    0.136    0.399 

Lambda     K      H
   0.267   0.0417    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,725,582
Number of Sequences: 36641
Number of extensions: 894057
Number of successful extensions: 3117
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 2859
Number of HSP's gapped (non-prelim): 164
length of query: 496
length of database: 10,336,785
effective HSP length: 101
effective length of query: 395
effective length of database: 6,636,044
effective search space: 2621237380
effective search space used: 2621237380
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.0 bits)
S2: 61 (28.1 bits)