BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P30419 (496 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1RXT-A nrPDB 1038 0.0 6FZ3-A nrPDB 803 0.0 4C2X-A nrPDB 699 0.0 6B1L-A nrPDB 439 e-123 5T6E-A nrPDB 367 e-102 5AG6-A nrPDB 354 4e-98 2P6F-A nrPDB 338 5e-93 1IYL-A nrPDB 327 7e-90 6D72-A nrPDB 29 4.0 3WSY-A nrPDB 29 5.8 >1RXT-A nrPDB Length = 496 Score = 1038 bits (2684), Expect = 0.0, Method: Compositional matrix adjust. Identities = 495/496 (99%), Positives = 496/496 (100%) Query: 1 MADESETAVKPPAPPLPQMMEGNGNGHEHCSDCENEEDNSYNRGGLSPANDTGAKKKKKK 60 MADESETAVKPPAPPLPQMMEGNGNGHEHCSDCENEEDNSYNRGGLSPANDTGAKKKKKK Sbjct: 1 MADESETAVKPPAPPLPQMMEGNGNGHEHCSDCENEEDNSYNRGGLSPANDTGAKKKKKK 60 Query: 61 QKKKKEKGSETDSAQDQPVKMNSLPAERIQEIQKAIELFSVGQGPAKTMEEASKRSYQFW 120 QKKKKEKGSETDSAQDQPVKMNSLPAERIQEIQKAIELFSVGQGPAKTMEEASKRSYQFW Sbjct: 61 QKKKKEKGSETDSAQDQPVKMNSLPAERIQEIQKAIELFSVGQGPAKTMEEASKRSYQFW 120 Query: 121 DTQPVPKLGEVVNTHGPVEPDKDNIRQEPYTLPQGFTWDALDLGDRGVLKELYTLLNENY 180 DTQPVPKLGEVVNTHGPVEPDKDNIRQEPYTLPQGFTWDALDLGDRGVLKELYTLLNENY Sbjct: 121 DTQPVPKLGEVVNTHGPVEPDKDNIRQEPYTLPQGFTWDALDLGDRGVLKELYTLLNENY 180 Query: 181 VEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTEK 240 VEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTEK Sbjct: 181 VEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTEK 240 Query: 241 KMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHRS 300 KMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHRS Sbjct: 241 KMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHRS 300 Query: 301 LNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLTRYLKQF 360 LNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLTRYLKQF Sbjct: 301 LNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLTRYLKQF 360 Query: 361 HLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKSLKAAY 420 HLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKSLKAAY Sbjct: 361 HLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKSLKAAY 420 Query: 421 SFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYN 480 SFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYN Sbjct: 421 SFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYN 480 Query: 481 WKCPSMGAEKVGLVLQ 496 WKCPSMGAEKVG+VLQ Sbjct: 481 WKCPSMGAEKVGIVLQ 496 >6FZ3-A nrPDB Length = 403 Score = 803 bits (2074), Expect = 0.0, Method: Compositional matrix adjust. Identities = 382/382 (100%), Positives = 382/382 (100%) Query: 115 RSYQFWDTQPVPKLGEVVNTHGPVEPDKDNIRQEPYTLPQGFTWDALDLGDRGVLKELYT 174 RSYQFWDTQPVPKLGEVVNTHGPVEPDKDNIRQEPYTLPQGFTWDALDLGDRGVLKELYT Sbjct: 22 RSYQFWDTQPVPKLGEVVNTHGPVEPDKDNIRQEPYTLPQGFTWDALDLGDRGVLKELYT 81 Query: 175 LLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIH 234 LLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIH Sbjct: 82 LLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIH 141 Query: 235 IYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTC 294 IYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTC Sbjct: 142 IYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTC 201 Query: 295 RYWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLT 354 RYWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLT Sbjct: 202 RYWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLT 261 Query: 355 RYLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHK 414 RYLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHK Sbjct: 262 RYLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHK 321 Query: 415 SLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNL 474 SLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNL Sbjct: 322 SLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNL 381 Query: 475 QYYLYNWKCPSMGAEKVGLVLQ 496 QYYLYNWKCPSMGAEKVGLVLQ Sbjct: 382 QYYLYNWKCPSMGAEKVGLVLQ 403 >4C2X-A nrPDB Length = 410 Score = 699 bits (1804), Expect = 0.0, Method: Compositional matrix adjust. Identities = 326/394 (82%), Positives = 358/394 (90%), Gaps = 2/394 (0%) Query: 103 QGPAKTMEEASKRSYQFWDTQPVPKLGEVVNTHGPVEPDKDNIRQEPYTLPQGFTWDALD 162 QGP M+EA+K YQFWDTQPVPKL EV+ +HG +EPDKDN+RQEPY+LPQGF WD LD Sbjct: 19 QGPH--MDEAAKHRYQFWDTQPVPKLDEVITSHGAIEPDKDNVRQEPYSLPQGFMWDTLD 76 Query: 163 LGDRGVLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKL 222 L D VLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWL QWHCGVRV S++KL Sbjct: 77 LSDAEVLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLLQWHCGVRVSSNKKL 136 Query: 223 VGFISAIPANIHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYT 282 VGFISAIPANI IYD+ KKMVEINFLCVHKKLRSKRVAPVLIREITRRV+LEGIFQAVYT Sbjct: 137 VGFISAIPANIRIYDSVKKMVEINFLCVHKKLRSKRVAPVLIREITRRVNLEGIFQAVYT 196 Query: 283 AGVVLPKPVGTCRYWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPME 342 AGVVLPKP+ TCRYWHRSLNP+KL+EVKFSHLSRNMT+QRTMKLYRLP+ KT+GLRPME Sbjct: 197 AGVVLPKPIATCRYWHRSLNPKKLVEVKFSHLSRNMTLQRTMKLYRLPDVTKTSGLRPME 256 Query: 343 TKDIPVVHQLLTRYLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYT 402 KDI V +L+ YLKQFHL PVM +EEV HWF P+E+IIDTFVVE+ NG++TDFLSFYT Sbjct: 257 PKDIKSVRELINTYLKQFHLAPVMDEEEVAHWFLPREHIIDTFVVESPNGKLTDFLSFYT 316 Query: 403 LPSTIMNHPTHKSLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFL 462 LPST+M+HP HKSLKAAYSFYN+HT+TPLLDLMSDAL+LAK KGFDVFNALDLMENKTFL Sbjct: 317 LPSTVMHHPAHKSLKAAYSFYNIHTETPLLDLMSDALILAKSKGFDVFNALDLMENKTFL 376 Query: 463 EKLKFGIGDGNLQYYLYNWKCPSMGAEKVGLVLQ 496 EKLKFGIGDGNLQYYLYNW+CP +EKVGLVLQ Sbjct: 377 EKLKFGIGDGNLQYYLYNWRCPGTDSEKVGLVLQ 410 >6B1L-A nrPDB Length = 405 Score = 439 bits (1129), Expect = e-123, Method: Compositional matrix adjust. Identities = 209/383 (54%), Positives = 275/383 (71%), Gaps = 5/383 (1%) Query: 117 YQFWDTQPVPKLGEVVN--THGPVEPDK--DNIRQEPYTLPQGFTWDALDLGDRGVLKEL 172 Y+FW TQPVPK+ + N + P D +++R++ Y LP G++W D+ D E+ Sbjct: 23 YKFWYTQPVPKINDEFNESVNEPFISDNKVEDVRKDEYKLPPGYSWYVCDVKDEKDRSEI 82 Query: 173 YTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPAN 232 YTLL +NYVEDDDN+FRF+YS EFLLWAL P +L WH GV+ +S KL+GFISAIP + Sbjct: 83 YTLLTDNYVEDDDNIFRFNYSAEFLLWALTSPNYLKTWHIGVKYDASNKLIGFISAIPTD 142 Query: 233 IHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVG 292 I I+ KM E+NFLCVHK LRSKR+APVLI+EITRR++LE I+QA+YTAGV LPKPV Sbjct: 143 ICIHKRTIKMAEVNFLCVHKTLRSKRLAPVLIKEITRRINLENIWQAIYTAGVYLPKPVS 202 Query: 293 TCRYWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQL 352 RY+HRS+N +KLIE+ FS L+ +TM R +KLYR+ +T +R M+ KD+ VH+L Sbjct: 203 DARYYHRSINVKKLIEIGFSSLNSRLTMSRAIKLYRVEDTLNIKNMRLMKKKDVEGVHKL 262 Query: 353 LTRYLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPT 412 L YL+QF+L V ++EE+ HWF P EN+I T+V E NG++ D +SFY+LPS I+ + Sbjct: 263 LGSYLEQFNLYAVFTKEEIAHWFLPIENVIYTYVNEE-NGKIKDMISFYSLPSQILGNDK 321 Query: 413 HKSLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDG 472 + +L AAYSFYNV T LM DA++LAK FDVFNAL++M+NK+ E LKFG GDG Sbjct: 322 YSTLNAAYSFYNVTTTATFKQLMQDAILLAKRNNFDVFNALEVMQNKSVFEDLKFGEGDG 381 Query: 473 NLQYYLYNWKCPSMGAEKVGLVL 495 +L+YYLYNWKC S VG+VL Sbjct: 382 SLKYYLYNWKCASFAPAHVGIVL 404 >5T6E-A nrPDB Length = 411 Score = 367 bits (942), Expect = e-102, Method: Compositional matrix adjust. Identities = 193/380 (50%), Positives = 249/380 (65%), Gaps = 20/380 (5%) Query: 122 TQPVPKLGEV-VNTHGPVEP-DKDNIRQEPYTLPQGFTWDALDLGDRGVLKELYTLLNEN 179 TQPVP+ E +T GP++ D + + +EP L +GF W LDL + L+EL+ LL + Sbjct: 6 TQPVPRFDETSTDTGGPIKIIDPEKVSKEPDALLEGFEWATLDLTNETELQELWDLLTYH 65 Query: 180 YVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTE 239 YVEDD+ MFRF YS FL WAL PGW +WH GVR SRKLV I +P I++ + + Sbjct: 66 YVEDDNAMFRFRYSQSFLHWALMSPGWKKEWHVGVRATKSRKLVASICGVPTEINVRNQK 125 Query: 240 KKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHR 299 K+VEINFLC+HKKLRSKR+ PVLI+EITRR +L GI+QA+YTAGVVLP PV +CRY+HR Sbjct: 126 LKVVEINFLCIHKKLRSKRLTPVLIKEITRRCYLNGIYQAIYTAGVVLPTPVSSCRYYHR 185 Query: 300 SLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLTRYLKQ 359 L+ KL EV FS L T R + LP T T GLRPME KDI VH LL RYL + Sbjct: 186 PLDWLKLYEVGFSPLPAGSTKARQITKNHLPSTTSTPGLRPMEPKDIDTVHDLLQRYLSR 245 Query: 360 FHLTPVMSQEEVEHWFY-----PQENIIDTFVVEN-ANGEVTDFLSFYTLPSTIMNHPTH 413 F L ++EEV+HW +E ++ +VVE+ ++TDF SFY L ST++ +P H Sbjct: 246 FALNQAFTREEVDHWLVHKPETVKEQVVWAYVVEDPETHKITDFFSFYNLESTVIQNPKH 305 Query: 414 KSLKAAYSFYNVHTQTP-----------LLDLMSDALVLAKMKGFDVFNALDLMENKTFL 462 +++AAY +Y T+T LL LM+DAL+LAK FDVFNAL L +N FL Sbjct: 306 DNVRAAYLYYYA-TETAFTNNMKALKERLLMLMNDALILAKKAHFDVFNALTLHDNPLFL 364 Query: 463 EKLKFGIGDGNLQYYLYNWK 482 E+LKFG GDG L +YLYN++ Sbjct: 365 EQLKFGAGDGQLHFYLYNYR 384 >5AG6-A nrPDB Length = 438 Score = 354 bits (909), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 178/424 (41%), Positives = 263/424 (62%), Gaps = 37/424 (8%) Query: 103 QGPAKTMEEASKRSYQFWDTQPVPKL---GEVVNTHGPVEPDKD--NIRQEPYTLPQGFT 157 QGP+ S ++ FW TQPVP+ E + GP++ K +I +EPY + F Sbjct: 20 QGPSN-----SDAAHAFWSTQPVPQTEDETEKIVFAGPMDEPKTVADIPEEPYPIASTFE 74 Query: 158 WDALDLGDRGVLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVV 217 W ++ + +Y LL +NYVEDDD+MFRF+YS EFL WAL PP ++P WH VR Sbjct: 75 WWTPNMEAADDIHAIYELLRDNYVEDDDSMFRFNYSEEFLQWALCPPNYIPDWHVAVRRK 134 Query: 218 SSRKLVGFISAIPANIHI---------------------YDTEKKMVEINFLCVHKKLRS 256 + +KL+ FI+ +P + + YD + + EINFLCVHK+LR Sbjct: 135 ADKKLLAFIAGVPVTLRMGTPKYMKVKAQEKGEGEEAAKYDEPRHICEINFLCVHKQLRE 194 Query: 257 KRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHRSLNPRKLIEVKFSHL-S 315 KR+AP+LI+E TRRV+ ++QAVYTAGV+LP P + +Y+HRSLNP KL+E++FS + + Sbjct: 195 KRLAPILIKEATRRVNRTNVWQAVYTAGVLLPTPYASGQYFHRSLNPEKLVEIRFSGIPA 254 Query: 316 RNMTMQRTMKL----YRLPETPKTAGLRPMETKDIPVVHQLLTRYLKQFHLTPVMSQEEV 371 + Q M + Y+LP PK +GLR M+ D+P V ++L YL F + PV S E+ Sbjct: 255 QYQKFQNPMAMLKRNYQLPSAPKNSGLREMKPSDVPQVRRILMNYLDSFDVGPVFSDAEI 314 Query: 372 EHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKSLKAAYSFYNVHTQTPL 431 H+ P++ ++ T+VVEN + +VTDF SFY +PST++ + + L AAY Y T PL Sbjct: 315 SHYLLPRDGVVFTYVVEN-DKKVTDFFSFYRIPSTVIGNSNYNLLNAAYVHYYAATSIPL 373 Query: 432 LDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYNWKCPSMGAEKV 491 L+ D L++A +GFDV N +++++N++F+E+LKFG GDG+L+YY YNW P + +V Sbjct: 374 HQLILDLLIVAHSRGFDVCNMVEILDNRSFVEQLKFGAGDGHLRYYFYNWAYPKIKPSQV 433 Query: 492 GLVL 495 LV+ Sbjct: 434 ALVM 437 >2P6F-A nrPDB Length = 455 Score = 338 bits (866), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 176/399 (44%), Positives = 246/399 (61%), Gaps = 25/399 (6%) Query: 110 EEASKRSYQFWDTQPVPKLGEVVNTHGPVEPDK--DNIRQEPYTLPQGFTWDALDLGDRG 167 ++ + + ++FW TQPV E V GP++ K ++I +P L F W ++D+ ++ Sbjct: 31 QKKAMKDHKFWRTQPVKDFDEKVVEEGPIDKPKTPEDISDKPLPLLSSFEWCSIDVDNKK 90 Query: 168 VLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFIS 227 L++++ LLNENYVED D FRF+Y+ EF WAL+ PGW WH GVRV ++KLV FIS Sbjct: 91 QLEDVFVLLNENYVEDRDAGFRFNYTKEFFNWALKSPGWKKDWHIGVRVKETQKLVAFIS 150 Query: 228 AIPANIHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVL 287 AIP + + + VEINFLCVHK+LRSKR+ PVLI+EITRRV+ I+ A+YTAG+VL Sbjct: 151 AIPVTLGVRGKQVPSVEINFLCVHKQLRSKRLTPVLIKEITRRVNKCDIWHALYTAGIVL 210 Query: 288 PKPVGTCRYWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIP 347 P PV TCRY HR LN +KL EV F+ L T + + LP KTAGLR ++ +DI Sbjct: 211 PAPVSTCRYTHRPLNWKKLYEVDFTGLPDGHTEEDMIAENALPAKTKTAGLRKLKKEDID 270 Query: 348 VVHQLLTRYLKQFHLTPVMSQEEVEHWFYPQEN------IIDTFVVENANGEVTDFLSFY 401 V +L RY +F L + ++EE EH F +E+ +I ++VVE +G++TDF SFY Sbjct: 271 QVFELFKRYQSRFELIQIFTKEEFEHNFIGEESLPLDKQVIFSYVVEQPDGKITDFFSFY 330 Query: 402 TLPSTIMNHPTHKSLKAAYSFYNV-----------------HTQTPLLDLMSDALVLAKM 444 +LP TI+N+ +K L Y +Y +T L +L+ DA +LAK Sbjct: 331 SLPFTILNNTKYKDLGIGYLYYYATDADFQFKDRFDPKATKALKTRLCELIYDACILAKN 390 Query: 445 KGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYNWKC 483 DVFNAL +N FL+ LKFG GDG L +YL+N++ Sbjct: 391 ANMDVFNALTSQDNTLFLDDLKFGPGDGFLNFYLFNYRA 429 >1IYL-A nrPDB Length = 392 Score = 327 bits (838), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 168/369 (45%), Positives = 229/369 (62%), Gaps = 16/369 (4%) Query: 136 GPVEPDK--DNIRQEPYTLPQGFTWDALDLGDRGVLKELYTLLNENYVEDDDNMFRFDYS 193 GP++ K +++ +P L F W LD+ D L ELY LL +NYVED D FRF YS Sbjct: 2 GPIDKLKTPEDVPNDPLPLISDFEWSTLDIDDNLQLDELYKLLYDNYVEDIDATFRFKYS 61 Query: 194 PEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTEKKM--VEINFLCVH 251 EF WAL+PPGW WH GVRV S+ KLV FI+A P + + K + VEINFLC+H Sbjct: 62 HEFFQWALKPPGWRKDWHVGVRVKSTGKLVAFIAATPVTFKLNKSNKVIDSVEINFLCIH 121 Query: 252 KKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHRSLNPRKLIEVKF 311 KKLR+KR+APVLI+EITRRV+ + I+QA+YT G +LP P+ TCRY HR +N KL +V F Sbjct: 122 KKLRNKRLAPVLIKEITRRVNKQNIWQALYTGGSILPTPLTTCRYQHRPINWSKLHDVGF 181 Query: 312 SHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLTRYLKQFHLTPVMSQEEV 371 SHL N T + Y LP PK GLRPM KD+ V LL +Y ++F + + ++EE Sbjct: 182 SHLPPNQTKSSMVASYTLPNNPKLKGLRPMTGKDVSTVLSLLYKYQERFDIVQLFTEEEF 241 Query: 372 EHWFYPQE-----NIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKSLKAAYSFYNV- 425 +HW + N++ ++VVE+ NG +TD+ S+Y LP T++++ H L AY FY Sbjct: 242 KHWMLGHDENSDSNVVKSYVVEDENGIITDYFSYYLLPFTVLDNAQHDELGIAYLFYYAS 301 Query: 426 ------HTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLY 479 + + L +L++DAL+ +K G DVFN L +N FL+ KFG GDG L YYL+ Sbjct: 302 DSFEKPNYKKRLNELITDALITSKKFGVDVFNCLTCQDNTYFLKDCKFGSGDGFLNYYLF 361 Query: 480 NWKCPSMGA 488 N++ M Sbjct: 362 NYRTFPMDG 370 >6D72-A nrPDB Length = 184 Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust. Identities = 11/21 (52%), Positives = 15/21 (71%) Query: 332 TPKTAGLRPMETKDIPVVHQL 352 T + LRP+E +D+P VHQL Sbjct: 6 TTSSVRLRPLEREDLPFVHQL 26 >3WSY-A nrPDB Length = 678 Score = 28.9 bits (63), Expect = 5.8, Method: Compositional matrix adjust. Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Query: 431 LLDLMSDALVLAKMKGFDVFNALDLMEN-KTFLEKLKFGIGD 471 ++ L D+L LA+ K DV+ + D ++ K +KL FG+G+ Sbjct: 33 IVALARDSLALARPKSSDVYVSYDYGKSFKKISDKLNFGLGN 74 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1RXT-A nrPDB 942 0.0 6FZ3-A nrPDB 709 0.0 4C2X-A nrPDB 703 0.0 6B1L-A nrPDB 611 e-175 2P6F-A nrPDB 598 e-171 5AG6-A nrPDB 598 e-171 5T6E-A nrPDB 581 e-166 1IYL-A nrPDB 570 e-163 Sequences not found previously or not previously below threshold: 1VHS-A nrPDB 35 0.11 1Z5X-E nrPDB 33 0.31 2CJU-H nrPDB 32 0.51 2FAU-A nrPDB 32 0.60 6CV9-A nrPDB 31 1.2 1QB4-A nrPDB 31 1.4 2G1D-A nrPDB 30 1.8 6C95-D nrPDB 30 2.3 1Z5X-U nrPDB 30 2.6 4PF1-A nrPDB 30 2.9 2JES-A nrPDB 29 5.4 CONVERGED! >1RXT-A nrPDB Length = 496 Score = 942 bits (2434), Expect = 0.0, Method: Composition-based stats. Identities = 495/496 (99%), Positives = 496/496 (100%) Query: 1 MADESETAVKPPAPPLPQMMEGNGNGHEHCSDCENEEDNSYNRGGLSPANDTGAKKKKKK 60 MADESETAVKPPAPPLPQMMEGNGNGHEHCSDCENEEDNSYNRGGLSPANDTGAKKKKKK Sbjct: 1 MADESETAVKPPAPPLPQMMEGNGNGHEHCSDCENEEDNSYNRGGLSPANDTGAKKKKKK 60 Query: 61 QKKKKEKGSETDSAQDQPVKMNSLPAERIQEIQKAIELFSVGQGPAKTMEEASKRSYQFW 120 QKKKKEKGSETDSAQDQPVKMNSLPAERIQEIQKAIELFSVGQGPAKTMEEASKRSYQFW Sbjct: 61 QKKKKEKGSETDSAQDQPVKMNSLPAERIQEIQKAIELFSVGQGPAKTMEEASKRSYQFW 120 Query: 121 DTQPVPKLGEVVNTHGPVEPDKDNIRQEPYTLPQGFTWDALDLGDRGVLKELYTLLNENY 180 DTQPVPKLGEVVNTHGPVEPDKDNIRQEPYTLPQGFTWDALDLGDRGVLKELYTLLNENY Sbjct: 121 DTQPVPKLGEVVNTHGPVEPDKDNIRQEPYTLPQGFTWDALDLGDRGVLKELYTLLNENY 180 Query: 181 VEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTEK 240 VEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTEK Sbjct: 181 VEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTEK 240 Query: 241 KMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHRS 300 KMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHRS Sbjct: 241 KMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHRS 300 Query: 301 LNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLTRYLKQF 360 LNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLTRYLKQF Sbjct: 301 LNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLTRYLKQF 360 Query: 361 HLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKSLKAAY 420 HLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKSLKAAY Sbjct: 361 HLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKSLKAAY 420 Query: 421 SFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYN 480 SFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYN Sbjct: 421 SFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYN 480 Query: 481 WKCPSMGAEKVGLVLQ 496 WKCPSMGAEKVG+VLQ Sbjct: 481 WKCPSMGAEKVGIVLQ 496 >6FZ3-A nrPDB Length = 403 Score = 709 bits (1830), Expect = 0.0, Method: Composition-based stats. Identities = 382/382 (100%), Positives = 382/382 (100%) Query: 115 RSYQFWDTQPVPKLGEVVNTHGPVEPDKDNIRQEPYTLPQGFTWDALDLGDRGVLKELYT 174 RSYQFWDTQPVPKLGEVVNTHGPVEPDKDNIRQEPYTLPQGFTWDALDLGDRGVLKELYT Sbjct: 22 RSYQFWDTQPVPKLGEVVNTHGPVEPDKDNIRQEPYTLPQGFTWDALDLGDRGVLKELYT 81 Query: 175 LLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIH 234 LLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIH Sbjct: 82 LLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIH 141 Query: 235 IYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTC 294 IYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTC Sbjct: 142 IYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTC 201 Query: 295 RYWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLT 354 RYWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLT Sbjct: 202 RYWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLT 261 Query: 355 RYLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHK 414 RYLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHK Sbjct: 262 RYLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHK 321 Query: 415 SLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNL 474 SLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNL Sbjct: 322 SLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNL 381 Query: 475 QYYLYNWKCPSMGAEKVGLVLQ 496 QYYLYNWKCPSMGAEKVGLVLQ Sbjct: 382 QYYLYNWKCPSMGAEKVGLVLQ 403 >4C2X-A nrPDB Length = 410 Score = 703 bits (1814), Expect = 0.0, Method: Composition-based stats. Identities = 326/394 (82%), Positives = 358/394 (90%), Gaps = 2/394 (0%) Query: 103 QGPAKTMEEASKRSYQFWDTQPVPKLGEVVNTHGPVEPDKDNIRQEPYTLPQGFTWDALD 162 QGP M+EA+K YQFWDTQPVPKL EV+ +HG +EPDKDN+RQEPY+LPQGF WD LD Sbjct: 19 QGPH--MDEAAKHRYQFWDTQPVPKLDEVITSHGAIEPDKDNVRQEPYSLPQGFMWDTLD 76 Query: 163 LGDRGVLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKL 222 L D VLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWL QWHCGVRV S++KL Sbjct: 77 LSDAEVLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLLQWHCGVRVSSNKKL 136 Query: 223 VGFISAIPANIHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYT 282 VGFISAIPANI IYD+ KKMVEINFLCVHKKLRSKRVAPVLIREITRRV+LEGIFQAVYT Sbjct: 137 VGFISAIPANIRIYDSVKKMVEINFLCVHKKLRSKRVAPVLIREITRRVNLEGIFQAVYT 196 Query: 283 AGVVLPKPVGTCRYWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPME 342 AGVVLPKP+ TCRYWHRSLNP+KL+EVKFSHLSRNMT+QRTMKLYRLP+ KT+GLRPME Sbjct: 197 AGVVLPKPIATCRYWHRSLNPKKLVEVKFSHLSRNMTLQRTMKLYRLPDVTKTSGLRPME 256 Query: 343 TKDIPVVHQLLTRYLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYT 402 KDI V +L+ YLKQFHL PVM +EEV HWF P+E+IIDTFVVE+ NG++TDFLSFYT Sbjct: 257 PKDIKSVRELINTYLKQFHLAPVMDEEEVAHWFLPREHIIDTFVVESPNGKLTDFLSFYT 316 Query: 403 LPSTIMNHPTHKSLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFL 462 LPST+M+HP HKSLKAAYSFYN+HT+TPLLDLMSDAL+LAK KGFDVFNALDLMENKTFL Sbjct: 317 LPSTVMHHPAHKSLKAAYSFYNIHTETPLLDLMSDALILAKSKGFDVFNALDLMENKTFL 376 Query: 463 EKLKFGIGDGNLQYYLYNWKCPSMGAEKVGLVLQ 496 EKLKFGIGDGNLQYYLYNW+CP +EKVGLVLQ Sbjct: 377 EKLKFGIGDGNLQYYLYNWRCPGTDSEKVGLVLQ 410 >6B1L-A nrPDB Length = 405 Score = 611 bits (1575), Expect = e-175, Method: Composition-based stats. Identities = 209/384 (54%), Positives = 275/384 (71%), Gaps = 5/384 (1%) Query: 116 SYQFWDTQPVPKLGEVVNT--HGPVEPDK--DNIRQEPYTLPQGFTWDALDLGDRGVLKE 171 Y+FW TQPVPK+ + N + P D +++R++ Y LP G++W D+ D E Sbjct: 22 DYKFWYTQPVPKINDEFNESVNEPFISDNKVEDVRKDEYKLPPGYSWYVCDVKDEKDRSE 81 Query: 172 LYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPA 231 +YTLL +NYVEDDDN+FRF+YS EFLLWAL P +L WH GV+ +S KL+GFISAIP Sbjct: 82 IYTLLTDNYVEDDDNIFRFNYSAEFLLWALTSPNYLKTWHIGVKYDASNKLIGFISAIPT 141 Query: 232 NIHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPV 291 +I I+ KM E+NFLCVHK LRSKR+APVLI+EITRR++LE I+QA+YTAGV LPKPV Sbjct: 142 DICIHKRTIKMAEVNFLCVHKTLRSKRLAPVLIKEITRRINLENIWQAIYTAGVYLPKPV 201 Query: 292 GTCRYWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQ 351 RY+HRS+N +KLIE+ FS L+ +TM R +KLYR+ +T +R M+ KD+ VH+ Sbjct: 202 SDARYYHRSINVKKLIEIGFSSLNSRLTMSRAIKLYRVEDTLNIKNMRLMKKKDVEGVHK 261 Query: 352 LLTRYLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHP 411 LL YL+QF+L V ++EE+ HWF P EN+I T+V E NG++ D +SFY+LPS I+ + Sbjct: 262 LLGSYLEQFNLYAVFTKEEIAHWFLPIENVIYTYVNE-ENGKIKDMISFYSLPSQILGND 320 Query: 412 THKSLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGD 471 + +L AAYSFYNV T LM DA++LAK FDVFNAL++M+NK+ E LKFG GD Sbjct: 321 KYSTLNAAYSFYNVTTTATFKQLMQDAILLAKRNNFDVFNALEVMQNKSVFEDLKFGEGD 380 Query: 472 GNLQYYLYNWKCPSMGAEKVGLVL 495 G+L+YYLYNWKC S VG+VL Sbjct: 381 GSLKYYLYNWKCASFAPAHVGIVL 404 >2P6F-A nrPDB Length = 455 Score = 598 bits (1543), Expect = e-171, Method: Composition-based stats. Identities = 176/404 (43%), Positives = 246/404 (60%), Gaps = 25/404 (6%) Query: 110 EEASKRSYQFWDTQPVPKLGEVVNTHGPVEPDK--DNIRQEPYTLPQGFTWDALDLGDRG 167 ++ + + ++FW TQPV E V GP++ K ++I +P L F W ++D+ ++ Sbjct: 31 QKKAMKDHKFWRTQPVKDFDEKVVEEGPIDKPKTPEDISDKPLPLLSSFEWCSIDVDNKK 90 Query: 168 VLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFIS 227 L++++ LLNENYVED D FRF+Y+ EF WAL+ PGW WH GVRV ++KLV FIS Sbjct: 91 QLEDVFVLLNENYVEDRDAGFRFNYTKEFFNWALKSPGWKKDWHIGVRVKETQKLVAFIS 150 Query: 228 AIPANIHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVL 287 AIP + + + VEINFLCVHK+LRSKR+ PVLI+EITRRV+ I+ A+YTAG+VL Sbjct: 151 AIPVTLGVRGKQVPSVEINFLCVHKQLRSKRLTPVLIKEITRRVNKCDIWHALYTAGIVL 210 Query: 288 PKPVGTCRYWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIP 347 P PV TCRY HR LN +KL EV F+ L T + + LP KTAGLR ++ +DI Sbjct: 211 PAPVSTCRYTHRPLNWKKLYEVDFTGLPDGHTEEDMIAENALPAKTKTAGLRKLKKEDID 270 Query: 348 VVHQLLTRYLKQFHLTPVMSQEEVEHWFYPQE------NIIDTFVVENANGEVTDFLSFY 401 V +L RY +F L + ++EE EH F +E +I ++VVE +G++TDF SFY Sbjct: 271 QVFELFKRYQSRFELIQIFTKEEFEHNFIGEESLPLDKQVIFSYVVEQPDGKITDFFSFY 330 Query: 402 TLPSTIMNHPTHKSLKAAYSFYNV-----------------HTQTPLLDLMSDALVLAKM 444 +LP TI+N+ +K L Y +Y +T L +L+ DA +LAK Sbjct: 331 SLPFTILNNTKYKDLGIGYLYYYATDADFQFKDRFDPKATKALKTRLCELIYDACILAKN 390 Query: 445 KGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYNWKCPSMGA 488 DVFNAL +N FL+ LKFG GDG L +YL+N++ + Sbjct: 391 ANMDVFNALTSQDNTLFLDDLKFGPGDGFLNFYLFNYRAKPITG 434 >5AG6-A nrPDB Length = 438 Score = 598 bits (1542), Expect = e-171, Method: Composition-based stats. Identities = 178/424 (41%), Positives = 262/424 (61%), Gaps = 37/424 (8%) Query: 103 QGPAKTMEEASKRSYQFWDTQPVPKL---GEVVNTHGPVEPDKD--NIRQEPYTLPQGFT 157 QGP+ S ++ FW TQPVP+ E + GP++ K +I +EPY + F Sbjct: 20 QGPSN-----SDAAHAFWSTQPVPQTEDETEKIVFAGPMDEPKTVADIPEEPYPIASTFE 74 Query: 158 WDALDLGDRGVLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVV 217 W ++ + +Y LL +NYVEDDD+MFRF+YS EFL WAL PP ++P WH VR Sbjct: 75 WWTPNMEAADDIHAIYELLRDNYVEDDDSMFRFNYSEEFLQWALCPPNYIPDWHVAVRRK 134 Query: 218 SSRKLVGFISAIPANIHI---------------------YDTEKKMVEINFLCVHKKLRS 256 + +KL+ FI+ +P + + YD + + EINFLCVHK+LR Sbjct: 135 ADKKLLAFIAGVPVTLRMGTPKYMKVKAQEKGEGEEAAKYDEPRHICEINFLCVHKQLRE 194 Query: 257 KRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHRSLNPRKLIEVKFSHLS- 315 KR+AP+LI+E TRRV+ ++QAVYTAGV+LP P + +Y+HRSLNP KL+E++FS + Sbjct: 195 KRLAPILIKEATRRVNRTNVWQAVYTAGVLLPTPYASGQYFHRSLNPEKLVEIRFSGIPA 254 Query: 316 RNMTMQRTMKL----YRLPETPKTAGLRPMETKDIPVVHQLLTRYLKQFHLTPVMSQEEV 371 + Q M + Y+LP PK +GLR M+ D+P V ++L YL F + PV S E+ Sbjct: 255 QYQKFQNPMAMLKRNYQLPSAPKNSGLREMKPSDVPQVRRILMNYLDSFDVGPVFSDAEI 314 Query: 372 EHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKSLKAAYSFYNVHTQTPL 431 H+ P++ ++ T+VVEN + +VTDF SFY +PST++ + + L AAY Y T PL Sbjct: 315 SHYLLPRDGVVFTYVVEN-DKKVTDFFSFYRIPSTVIGNSNYNLLNAAYVHYYAATSIPL 373 Query: 432 LDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYNWKCPSMGAEKV 491 L+ D L++A +GFDV N +++++N++F+E+LKFG GDG+L+YY YNW P + +V Sbjct: 374 HQLILDLLIVAHSRGFDVCNMVEILDNRSFVEQLKFGAGDGHLRYYFYNWAYPKIKPSQV 433 Query: 492 GLVL 495 LV+ Sbjct: 434 ALVM 437 >5T6E-A nrPDB Length = 411 Score = 581 bits (1497), Expect = e-166, Method: Composition-based stats. Identities = 191/385 (49%), Positives = 248/385 (64%), Gaps = 18/385 (4%) Query: 122 TQPVPKLGEV-VNTHGPVEP-DKDNIRQEPYTLPQGFTWDALDLGDRGVLKELYTLLNEN 179 TQPVP+ E +T GP++ D + + +EP L +GF W LDL + L+EL+ LL + Sbjct: 6 TQPVPRFDETSTDTGGPIKIIDPEKVSKEPDALLEGFEWATLDLTNETELQELWDLLTYH 65 Query: 180 YVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTE 239 YVEDD+ MFRF YS FL WAL PGW +WH GVR SRKLV I +P I++ + + Sbjct: 66 YVEDDNAMFRFRYSQSFLHWALMSPGWKKEWHVGVRATKSRKLVASICGVPTEINVRNQK 125 Query: 240 KKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHR 299 K+VEINFLC+HKKLRSKR+ PVLI+EITRR +L GI+QA+YTAGVVLP PV +CRY+HR Sbjct: 126 LKVVEINFLCIHKKLRSKRLTPVLIKEITRRCYLNGIYQAIYTAGVVLPTPVSSCRYYHR 185 Query: 300 SLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLTRYLKQ 359 L+ KL EV FS L T R + LP T T GLRPME KDI VH LL RYL + Sbjct: 186 PLDWLKLYEVGFSPLPAGSTKARQITKNHLPSTTSTPGLRPMEPKDIDTVHDLLQRYLSR 245 Query: 360 FHLTPVMSQEEVEHWFY-----PQENIIDTFVVENA-NGEVTDFLSFYTLPSTIMNHPTH 413 F L ++EEV+HW +E ++ +VVE+ ++TDF SFY L ST++ +P H Sbjct: 246 FALNQAFTREEVDHWLVHKPETVKEQVVWAYVVEDPETHKITDFFSFYNLESTVIQNPKH 305 Query: 414 KSLKAAYSFYNV----------HTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLE 463 +++AAY +Y + LL LM+DAL+LAK FDVFNAL L +N FLE Sbjct: 306 DNVRAAYLYYYATETAFTNNMKALKERLLMLMNDALILAKKAHFDVFNALTLHDNPLFLE 365 Query: 464 KLKFGIGDGNLQYYLYNWKCPSMGA 488 +LKFG GDG L +YLYN++ + Sbjct: 366 QLKFGAGDGQLHFYLYNYRTAPVPG 390 >1IYL-A nrPDB Length = 392 Score = 570 bits (1469), Expect = e-163, Method: Composition-based stats. Identities = 168/370 (45%), Positives = 229/370 (61%), Gaps = 16/370 (4%) Query: 135 HGPVEPDK--DNIRQEPYTLPQGFTWDALDLGDRGVLKELYTLLNENYVEDDDNMFRFDY 192 GP++ K +++ +P L F W LD+ D L ELY LL +NYVED D FRF Y Sbjct: 1 EGPIDKLKTPEDVPNDPLPLISDFEWSTLDIDDNLQLDELYKLLYDNYVEDIDATFRFKY 60 Query: 193 SPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTEKKM--VEINFLCV 250 S EF WAL+PPGW WH GVRV S+ KLV FI+A P + + K + VEINFLC+ Sbjct: 61 SHEFFQWALKPPGWRKDWHVGVRVKSTGKLVAFIAATPVTFKLNKSNKVIDSVEINFLCI 120 Query: 251 HKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHRSLNPRKLIEVK 310 HKKLR+KR+APVLI+EITRRV+ + I+QA+YT G +LP P+ TCRY HR +N KL +V Sbjct: 121 HKKLRNKRLAPVLIKEITRRVNKQNIWQALYTGGSILPTPLTTCRYQHRPINWSKLHDVG 180 Query: 311 FSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLTRYLKQFHLTPVMSQEE 370 FSHL N T + Y LP PK GLRPM KD+ V LL +Y ++F + + ++EE Sbjct: 181 FSHLPPNQTKSSMVASYTLPNNPKLKGLRPMTGKDVSTVLSLLYKYQERFDIVQLFTEEE 240 Query: 371 VEHWFYPQE-----NIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKSLKAAYSFYNV 425 +HW + N++ ++VVE+ NG +TD+ S+Y LP T++++ H L AY FY Sbjct: 241 FKHWMLGHDENSDSNVVKSYVVEDENGIITDYFSYYLLPFTVLDNAQHDELGIAYLFYYA 300 Query: 426 -------HTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYL 478 + + L +L++DAL+ +K G DVFN L +N FL+ KFG GDG L YYL Sbjct: 301 SDSFEKPNYKKRLNELITDALITSKKFGVDVFNCLTCQDNTYFLKDCKFGSGDGFLNYYL 360 Query: 479 YNWKCPSMGA 488 +N++ M Sbjct: 361 FNYRTFPMDG 370 >1VHS-A nrPDB Length = 175 Score = 34.6 bits (78), Expect = 0.11, Method: Composition-based stats. Identities = 32/149 (21%), Positives = 52/149 (34%), Gaps = 16/149 (10%) Query: 338 LRPMETKDIPVVHQLLTRYLKQFHLTP---VMSQEEVEHWFYPQENIIDTFVVENANGEV 394 LR E +D+ V + + +T ++ E+ WF +V E+ NG V Sbjct: 5 LRLAEHRDLEAVVAIYNSTIASRMVTADTEPVTPEDRMEWFSGHTESRPLYVAEDENGNV 64 Query: 395 TDFLSFYTLPSTIMNHPTHKSLKAAYSFYNVHTQTPLLD----LMSDALVLAKMKGFDVF 450 ++SF T P + K A + L+ +AL +A G Sbjct: 65 AAWISF----ETFYGRPAYN--KTAEVSIYIDEACRGKGVGSYLLQEALRIAPNLGIRSL 118 Query: 451 NALDLMENKTFLEKLKFGIGDGNLQYYLY 479 A NK LK G ++ L+ Sbjct: 119 MAFIFGHNK---PSLKLFEKHGFAEWGLF 144 >1Z5X-E nrPDB Length = 310 Score = 33.1 bits (74), Expect = 0.31, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 11/105 (10%) Query: 48 PANDTGAKKKKKKQKKKKEKGSETDSAQDQPVKMNSLPAERIQEIQKAIELFSV-GQGPA 106 P K+K+KK +K K+K + T S +K P Q + +L SV G P Sbjct: 19 PEFQCAVKRKEKKAQKDKDKPNSTTSCSPDGIKQEIDP----QRLDTDSQLLSVNGVKPI 74 Query: 107 KTMEEASKRSYQFW---DTQPVPKLGEVVNTHGPVEPDKDNIRQE 148 +E ++ P P+ + + P +++N+ +E Sbjct: 75 TPEQEELIHRLVYFQNEYEHPSPEDIKRIVNAAP---EEENVAEE 116 >2CJU-H nrPDB Length = 121 Score = 32.3 bits (72), Expect = 0.51, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 27/62 (43%), Gaps = 3/62 (4%) Query: 190 FDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTEKKMV---EIN 246 F ++ ++ W +PPG +W +R ++ + +++ I + + E+N Sbjct: 27 FTFTNYYMNWVRQPPGKALEWLVSIRNKANGYTTDYSASVKGRFTISRDNSQSILYLEMN 86 Query: 247 FL 248 L Sbjct: 87 NL 88 >2FAU-A nrPDB Length = 341 Score = 31.9 bits (71), Expect = 0.60, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 44/109 (40%), Gaps = 7/109 (6%) Query: 305 KLIEVKFSHL-SRNMTMQRTMKLYRLPETPKTAG----LRP-METKD-IPVVHQLLTRYL 357 +LI+ + + + T T+ Y + + G +R + D P + + ++ Sbjct: 212 QLIKKEITGIGPSTTTETETIAKYEIMDGAPVKGESIPIRLFLAGYDPTPTMRDVNKKFS 271 Query: 358 KQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPST 406 ++ L V+ EE +F QE I+ E + T+F + P + Sbjct: 272 VRYFLNLVLVDEEDRRYFKQQEIILWRKAPEKLRKQRTNFHQRFESPES 320 >6CV9-A nrPDB Length = 842 Score = 31.2 bits (69), Expect = 1.2, Method: Composition-based stats. Identities = 29/148 (19%), Positives = 58/148 (39%), Gaps = 22/148 (14%) Query: 18 QMMEGNGNGHEHCSDCENEEDNSYNRGGLSPANDTGAKKKKKKQKKKKEKGSETDSAQDQ 77 ++++G G + D E + N + G+S +++ +K K + K S T S++D Sbjct: 697 ELIQGQKQGFQE--DAEMNKRNEEKKFGISGSHEDLSKFSLDKNQLAHNKQSSTRSSEDY 754 Query: 78 PVKMNSLPAERIQEIQKAIELFSVGQGPAKTMEEASKRSYQFWDTQPVPKLGEVVNTHGP 137 + S P + Q+I K + V Q +++ S G Sbjct: 755 HLNSFSNPPRQYQKIMKRLIKRYVLQA---QIDKESDE-----------------VNEGE 794 Query: 138 VEPDKDNIRQEPYTLPQGFTWDALDLGD 165 ++ K +I Y L + + + DL + Sbjct: 795 LKEIKQDISSLRYELLEEKSQNTEDLAE 822 >1QB4-A nrPDB Length = 883 Score = 30.8 bits (68), Expect = 1.4, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 5/84 (5%) Query: 215 RVVSSRKLVGFISAIPANIHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLE 274 + V S L ++A P I KMVE+N C+ K+L +K +A ++ RR+ + Sbjct: 124 KAVESLSLELVLTAHPTEITRRTLIHKMVEVN-ACL-KQLDNKDIADYEHNQLMRRL-RQ 180 Query: 275 GIFQAVYTAGV--VLPKPVGTCRY 296 I Q+ +T + + P PV ++ Sbjct: 181 LIAQSWHTDEIRKLRPSPVDEAKW 204 >2G1D-A nrPDB Length = 98 Score = 30.4 bits (67), Expect = 1.8, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 39/83 (46%), Gaps = 7/83 (8%) Query: 342 ETKDIPVVHQLLTRYLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVT------ 395 E +D P++ + +Y+ +F + S+EE++ E + V+ + N ++T Sbjct: 7 EKRDNPILKRKEIKYVLKFDSSRTPSREEIKELIAKHEGVDKELVIVDNNKQLTGKHEIE 66 Query: 396 DFLSFYT-LPSTIMNHPTHKSLK 417 + Y PS ++ P ++ ++ Sbjct: 67 GYTKIYADKPSAMLYEPDYELIR 89 >6C95-D nrPDB Length = 129 Score = 30.0 bits (66), Expect = 2.3, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 2/87 (2%) Query: 4 ESETAVKPPAPPLPQMMEGNGNGHEHCSD-CENEEDNSYN-RGGLSPANDTGAKKKKKKQ 61 E+ET+ P P+ + E +D E +E S N +S D ++++K KQ Sbjct: 20 ETETSGPERPPEKPRKHDSGAADLERVTDYAEEKEIQSSNLETAMSVIGDRRSREQKAKQ 79 Query: 62 KKKKEKGSETDSAQDQPVKMNSLPAER 88 +++KE T +D + M + R Sbjct: 80 EREKELAKVTIKKEDLELIMTEMEISR 106 >1Z5X-U nrPDB Length = 262 Score = 30.0 bits (66), Expect = 2.6, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 25/48 (52%) Query: 50 NDTGAKKKKKKQKKKKEKGSETDSAQDQPVKMNSLPAERIQEIQKAIE 97 +D G K++ ++++++ K + + N +P ERI E + +E Sbjct: 7 DDKGPKREAVQEERQRNKEKSENEVESTSNSQNDMPIERILEAELRVE 54 >4PF1-A nrPDB Length = 626 Score = 29.6 bits (65), Expect = 2.9, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 5/59 (8%) Query: 328 RLPETPKTAGLRPMETKDIPVVHQLLTRYLKQFHLTPVMSQEEVEHWFYPQENIIDTFV 386 +PE PK G + M + DI RY + F + + ++V + P + TF+ Sbjct: 514 EVPENPKLGGYQQMLSADI-----FRGRYREDFAVAKPLVPDKVLEYRIPLPQVSHTFL 567 >2JES-A nrPDB Length = 503 Score = 28.9 bits (63), Expect = 5.4, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 41/94 (43%), Gaps = 12/94 (12%) Query: 107 KTMEEASKRSYQFWDTQPVPKLGEV-------VNTHGPVEPDKDNIRQEPYTLPQGFTWD 159 +T++ S + ++W P + E + KDN R++ + +++ Sbjct: 132 ETVKNMSNKGIEYWH----PFVDEEGEFDYVIFPAEEMIVVYKDNTRRDILFALRYYSYK 187 Query: 160 ALDLGDRGVLKELYTLLNENYVEDDDNMFRFDYS 193 + +G+ ELYT + Y E D +++ DYS Sbjct: 188 GI-MGEETQKAELYTDTHVYYYEKIDGVYQMDYS 220 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.306 0.136 0.399 Lambda K H 0.267 0.0417 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,725,582 Number of Sequences: 36641 Number of extensions: 894057 Number of successful extensions: 3117 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 33 Number of HSP's successfully gapped in prelim test: 24 Number of HSP's that attempted gapping in prelim test: 2859 Number of HSP's gapped (non-prelim): 164 length of query: 496 length of database: 10,336,785 effective HSP length: 101 effective length of query: 395 effective length of database: 6,636,044 effective search space: 2621237380 effective search space used: 2621237380 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 61 (28.1 bits)