BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P30281 (292 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3G33-B nrPDB 596 e-171 2W99-A nrPDB 273 6e-74 2F2C-A nrPDB 108 2e-24 3QHW-B nrPDB 98 4e-21 3DDQ-B nrPDB 95 3e-20 1W98-B nrPDB 79 3e-15 4YC3-B nrPDB 76 1e-14 2E84-A nrPDB 29 2.5 4QGS-A nrPDB 28 3.3 6NHE-A nrPDB 28 3.3 3JYN-A nrPDB 28 4.2 4PUF-A nrPDB 28 4.2 2C4M-A nrPDB 28 4.3 5IKP-A nrPDB 28 5.5 >3G33-B nrPDB Length = 306 Score = 596 bits (1536), Expect = e-171, Method: Compositional matrix adjust. Identities = 291/292 (99%), Positives = 292/292 (100%) Query: 1 MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQCVQREIKPHMRKML 60 MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQCVQREIKPHMRKML Sbjct: 15 MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQCVQREIKPHMRKML 74 Query: 61 AYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLT 120 AYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLT Sbjct: 75 AYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLT 134 Query: 121 IEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKK 180 IEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKK Sbjct: 135 IEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKK 194 Query: 181 HAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCL 240 HAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCL Sbjct: 195 HAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCL 254 Query: 241 RACQEQIEAALRESLREASQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIHL 292 RACQEQIEAALRESLREA+QTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIHL Sbjct: 255 RACQEQIEAALRESLREAAQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIHL 306 >2W99-A nrPDB Length = 271 Score = 273 bits (698), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 150/272 (55%), Positives = 193/272 (70%), Gaps = 9/272 (3%) Query: 2 ELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQCVQREIKPHMRKMLA 61 +LLCCE RA PD LL D RVL+++L+ EE P SYF+CVQ+E+ P MRK++A Sbjct: 4 QLLCCE-VETIRRAYPDANLLND-RVLRAMLKAEETCAPSVSYFKCVQKEVLPSMRKIVA 61 Query: 62 YWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLTI 121 WMLEVCEEQ+CEEEVFPLAMNYLDR+LS P +K++LQLLGA CM +ASK++ET PLT Sbjct: 62 TWMLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGATCMFVASKMKETIPLTA 121 Query: 122 EKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKH 181 EKLCIYTD+++ P +L E+L++ KLKW+LAA+ HDF+ L ++ + + +++KH Sbjct: 122 EKLCIYTDNSIRPEELLQMELLLVNKLKWNLAAMTPHDFIEHFLSKMPEAEENKQIIRKH 181 Query: 182 AQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACS----MSGDELTELLAGITGTEV 237 AQTF+ALCATD F PPSM+A GS+ AAVQGL S +S LT L+ + + Sbjct: 182 AQTFVALCATDVKFISNPPSMVAAGSVVAAVQGLNLRSPNNFLSYYRLTRFLSRVIKCDP 241 Query: 238 DCLRACQEQIEAALRESLREASQTSSSPAPKA 269 DCLRACQEQIEA L SLR+A Q PKA Sbjct: 242 DCLRACQEQIEALLESSLRQAQQNMD---PKA 270 >2F2C-A nrPDB Length = 254 Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 70/238 (29%), Positives = 114/238 (47%), Gaps = 1/238 (0%) Query: 14 RAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRC 73 RA D + D RVL +L +L E +P+ + +Q E+ R +L WM +CE Sbjct: 10 RAKIDSTTMKDPRVLNNL-KLRELLLPKFTSLWEIQTEVTVDNRTILLTWMHLLCESFEL 68 Query: 74 EEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVS 133 ++ VFPL+++ LDRYL K LQ +GA C+L+ SK+R P+T+ KL + + Sbjct: 69 DKSVFPLSVSILDRYLCKKQGTKKTLQKIGAACVLIGSKIRTVKPMTVSKLTYLSCDCFT 128 Query: 134 PRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDY 193 +L + E +L LKWD AV+A DFL + + L +P D + + A T + Sbjct: 129 NLELINQEKDILEALKWDTEAVLATDFLIPLCNALKIPEDLWPQLYEAASTTICKALIQP 188 Query: 194 TFAMYPPSMIATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCLRACQEQIEAAL 251 A+ P +I G + ++ E L+ I + +R ++Q+ A Sbjct: 189 NIALLSPGLICAGGLLTTIETDNTNCRPWTCYLEDLSSILNFSTNTVRTVKDQVSEAF 246 >3QHW-B nrPDB Length = 261 Score = 97.8 bits (242), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 77/239 (32%), Positives = 120/239 (50%), Gaps = 11/239 (4%) Query: 25 QRVLQSLLR-LEERYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMN 83 Q + + LR +E + P+ Y + Q +I MR +L W++EV EE + + E LA+N Sbjct: 8 QEDIHTYLREMEVKCKPKVGYMKR-QPDITNSMRAILVDWLVEVGEEYKLQNETLHLAVN 66 Query: 84 YLDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVL 143 Y+DR+LS + + +LQL+G MLLASK E P + + TD S +Q+ E L Sbjct: 67 YIDRFLSSMSVLRGKLQLVGTAAMLLASKFEEIYPPEVAEFVYITDDTYSKKQVLRMEHL 126 Query: 144 VLGKLKWDLAAVIAHDFLA-FILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSM 202 VL L +DLAA + FL + LH ++L + L+L D + Y PS+ Sbjct: 127 VLKVLAFDLAAPTVNQFLTQYFLHLQPANCKVESLAMFLGE--LSLIDAD-PYLKYLPSL 183 Query: 203 IATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREASQT 261 IA GAA L +++G E LA TG ++ L+ C + ++ + A Q+ Sbjct: 184 IA----GAAFH-LALYTVTGQSWPESLAQQTGYTLESLKPCLVDLHQTYLKAPQHAQQS 237 >3DDQ-B nrPDB Length = 269 Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 68/205 (33%), Positives = 104/205 (50%), Gaps = 10/205 (4%) Query: 40 PRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQL 99 P+ Y + Q +I MR +L W++EV EE + + E LA+NY+DR+LS + + +L Sbjct: 25 PKVGYMKK-QPDITNSMRAILVDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGKL 83 Query: 100 QLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHD 159 QL+G MLLASK E P + + TD + +Q+ E LVL L +DLAA + Sbjct: 84 QLVGTAAMLLASKFEEIYPPEVAEFVYITDDTYTKKQVLRMEHLVLKVLAFDLAAPTINQ 143 Query: 160 FLA-FILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGAC 218 FL + LH+ ++L + L+L D + Y PS+IA AA L Sbjct: 144 FLTQYFLHQQPANCKVESLAMFLGE--LSLIDAD-PYLKYLPSVIA-----AAAFHLALY 195 Query: 219 SMSGDELTELLAGITGTEVDCLRAC 243 +++G E L TG ++ L+ C Sbjct: 196 TVTGQSWPESLVQKTGYTLETLKPC 220 >1W98-B nrPDB Length = 283 Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 72/284 (25%), Positives = 124/284 (43%), Gaps = 30/284 (10%) Query: 14 RAGPDPRLLGDQR--VLQSLLRLEERYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQ 71 R P P L R V + +L E+ Y+ R +F ++P MR +L W++EVCE Sbjct: 6 RGSPLPVLSWANREEVWKIMLNKEKTYL-RDQHFLEQHPLLQPKMRAILLDWLMEVCEVY 64 Query: 72 RCEEEVFPLAMNYLDRYLSCVPT-RKAQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDH 130 + E F LA ++ DRY++ K LQL+G + +A+KL E P + + TD Sbjct: 65 KLHRETFYLAQDFFDRYMATQENVVKTLLQLIGISSLFIAAKLEEIYPPKLHQFAYVTDG 124 Query: 131 AVSPRQLRDWEVLVLGKLKWDLAAVIAHDFL------AFI--LHRLSLPRDRQALVKKHA 182 A S ++ E++++ LKW L+ + +L A++ LH + LP+ Q + + A Sbjct: 125 ACSGDEILTMELMIMKALKWRLSPLTIVSWLNVYMQVAYLNDLHEVLLPQYPQQIFIQIA 184 Query: 183 QTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCLRA 242 + L LC D +P ++A ++ S EL + ++G +++ Sbjct: 185 E-LLDLCVLDVDCLEFPYGILAASAL---------YHFSSSELMQKVSGYQWCDIENCVK 234 Query: 243 CQEQIEAALRESLREASQTSSSPAPKAPRGSSSQGPSQTSTPTD 286 +RE + S K RG + + T D Sbjct: 235 WMVPFAMVIRE--------TGSSKLKHFRGVADEDAHNIQTHRD 270 >4YC3-B nrPDB Length = 273 Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 90/187 (48%), Gaps = 10/187 (5%) Query: 31 LLRLEERYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLS 90 L +LEE R Y + RE+ +MR +L W+++V + R +E + ++ +DR++ Sbjct: 18 LRQLEEEQAVRPKY--LLGREVTGNMRAILIDWLVQVQMKFRLLQETMYMTVSIIDRFMQ 75 Query: 91 CVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKW 150 K LQL+G M +ASK E P I TD+ + Q+R E+ +L L + Sbjct: 76 NNSVPKKMLQLVGVTAMFIASKYEEMYPPEIGDFAFVTDNTYTKHQIRQMEMKILRALNF 135 Query: 151 DLAAVIAHDFLAFILHRLSLPRDRQALVKKH--AQTFLALCATDYTFAMYPPSMIATGSI 208 L + F L R S + + V++H A+ + L DY +PPS IA G+ Sbjct: 136 GLGRPLPLHF----LRRAS--KIGEVDVEQHTLAKYLMELTMLDYDMVHFPPSQIAAGAF 189 Query: 209 GAAVQGL 215 A++ L Sbjct: 190 SLALKIL 196 >2E84-A nrPDB Length = 556 Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust. Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 1/49 (2%) Query: 213 QGLGACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREASQT 261 + GAC DE + L+ + E C RAC + SLREA+ T Sbjct: 179 KNCGACHHVYDEAAKKLSWVKNKEDSC-RACHGDARVEKKPSLREAAHT 226 >4QGS-A nrPDB Length = 398 Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust. Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Query: 173 DRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQ 213 D+QA H Q A+ YT+ + PP +A G + A V Sbjct: 170 DKQAFHSAHVQPVFAVLDPVYTYTL-PPRQVANGVVDAFVH 209 >6NHE-A nrPDB Length = 422 Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust. Identities = 10/24 (41%), Positives = 18/24 (75%) Query: 69 EEQRCEEEVFPLAMNYLDRYLSCV 92 E+ R ++++FPLA +LD+Y S + Sbjct: 50 EDVRTKDQLFPLAKEFLDQYYSSI 73 >3JYN-A nrPDB Length = 325 Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust. Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 3/57 (5%) Query: 175 QALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACSMSGDELTELLAG 231 QA+V ++ L T Y +YP + +G +GA +G G GDE+T G Sbjct: 29 QAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSG-LGA--EGAGVVEAVGDEVTRFKVG 82 >4PUF-A nrPDB Length = 637 Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust. Identities = 11/41 (26%), Positives = 20/41 (48%) Query: 43 SYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMN 83 Y Q P ++ ++ W++ + E+ E VF +AMN Sbjct: 373 DYLGDTQNTRHPDFKEQVSAWLMRLAEDSALRETVFIIAMN 413 >2C4M-A nrPDB Length = 796 Score = 28.1 bits (61), Expect = 4.3, Method: Compositional matrix adjust. Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 4/80 (5%) Query: 115 ETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDR 174 E + + K YT+H V L W+ + +L W + +IA F L R + D Sbjct: 320 EESWAIVSKTFAYTNHTVLTEALEQWDEQIFQQLFWRVWEIIAEIDRRFRLERAADGLDE 379 Query: 175 QALVK----KHAQTFLALCA 190 + + + +H +A A Sbjct: 380 ETINRMAPIQHGTVHMAWIA 399 >5IKP-A nrPDB Length = 846 Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust. Identities = 12/27 (44%), Positives = 15/27 (55%) Query: 122 EKLCIYTDHAVSPRQLRDWEVLVLGKL 148 +K C YT+H V P L W V + KL Sbjct: 373 KKTCAYTNHTVLPEALERWPVSMFEKL 399 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3G33-B nrPDB 427 e-120 2W99-A nrPDB 295 1e-80 1W98-B nrPDB 292 9e-80 2F2C-A nrPDB 280 4e-76 3DDQ-B nrPDB 265 2e-71 3QHW-B nrPDB 263 4e-71 4YC3-B nrPDB 218 2e-57 Sequences not found previously or not previously below threshold: 1KXU-A nrPDB 52 2e-07 4NST-B nrPDB 52 2e-07 5IYC-M nrPDB 44 1e-04 2PK2-A nrPDB 42 3e-04 5WH1-A nrPDB 42 3e-04 3MIA-B nrPDB 41 8e-04 6GZH-B nrPDB 41 9e-04 2IVX-A nrPDB 40 0.002 4F7N-B nrPDB 36 0.021 4I6V-A nrPDB 31 0.50 6CN0-A nrPDB 31 0.70 5ISU-A nrPDB 29 2.4 4RVC-A nrPDB 29 2.8 2YF0-A nrPDB 29 2.8 5AZI-A nrPDB 29 3.6 >3G33-B nrPDB Length = 306 Score = 427 bits (1097), Expect = e-120, Method: Composition-based stats. Identities = 291/292 (99%), Positives = 292/292 (100%) Query: 1 MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQCVQREIKPHMRKML 60 MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQCVQREIKPHMRKML Sbjct: 15 MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQCVQREIKPHMRKML 74 Query: 61 AYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLT 120 AYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLT Sbjct: 75 AYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLT 134 Query: 121 IEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKK 180 IEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKK Sbjct: 135 IEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKK 194 Query: 181 HAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCL 240 HAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCL Sbjct: 195 HAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCL 254 Query: 241 RACQEQIEAALRESLREASQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIHL 292 RACQEQIEAALRESLREA+QTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIHL Sbjct: 255 RACQEQIEAALRESLREAAQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIHL 306 >2W99-A nrPDB Length = 271 Score = 295 bits (756), Expect = 1e-80, Method: Composition-based stats. Identities = 148/269 (55%), Positives = 191/269 (71%), Gaps = 6/269 (2%) Query: 2 ELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQCVQREIKPHMRKMLA 61 +LLCCE RA PD LL D RVL+++L+ EE P SYF+CVQ+E+ P MRK++A Sbjct: 4 QLLCCE-VETIRRAYPDANLLND-RVLRAMLKAEETCAPSVSYFKCVQKEVLPSMRKIVA 61 Query: 62 YWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLTI 121 WMLEVCEEQ+CEEEVFPLAMNYLDR+LS P +K++LQLLGA CM +ASK++ET PLT Sbjct: 62 TWMLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGATCMFVASKMKETIPLTA 121 Query: 122 EKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKH 181 EKLCIYTD+++ P +L E+L++ KLKW+LAA+ HDF+ L ++ + + +++KH Sbjct: 122 EKLCIYTDNSIRPEELLQMELLLVNKLKWNLAAMTPHDFIEHFLSKMPEAEENKQIIRKH 181 Query: 182 AQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACS----MSGDELTELLAGITGTEV 237 AQTF+ALCATD F PPSM+A GS+ AAVQGL S +S LT L+ + + Sbjct: 182 AQTFVALCATDVKFISNPPSMVAAGSVVAAVQGLNLRSPNNFLSYYRLTRFLSRVIKCDP 241 Query: 238 DCLRACQEQIEAALRESLREASQTSSSPA 266 DCLRACQEQIEA L SLR+A Q A Sbjct: 242 DCLRACQEQIEALLESSLRQAQQNMDPKA 270 >1W98-B nrPDB Length = 283 Score = 292 bits (748), Expect = 9e-80, Method: Composition-based stats. Identities = 72/284 (25%), Positives = 124/284 (43%), Gaps = 30/284 (10%) Query: 14 RAGPDPRLLGDQR--VLQSLLRLEERYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQ 71 R P P L R V + +L E+ Y+ R +F ++P MR +L W++EVCE Sbjct: 6 RGSPLPVLSWANREEVWKIMLNKEKTYL-RDQHFLEQHPLLQPKMRAILLDWLMEVCEVY 64 Query: 72 RCEEEVFPLAMNYLDRYLSCVP-TRKAQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDH 130 + E F LA ++ DRY++ K LQL+G + +A+KL E P + + TD Sbjct: 65 KLHRETFYLAQDFFDRYMATQENVVKTLLQLIGISSLFIAAKLEEIYPPKLHQFAYVTDG 124 Query: 131 AVSPRQLRDWEVLVLGKLKWDLAAVIAHDFL------AFI--LHRLSLPRDRQALVKKHA 182 A S ++ E++++ LKW L+ + +L A++ LH + LP+ Q + + A Sbjct: 125 ACSGDEILTMELMIMKALKWRLSPLTIVSWLNVYMQVAYLNDLHEVLLPQYPQQIFIQIA 184 Query: 183 QTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCLRA 242 + L LC D +P ++A ++ S EL + ++G +++ Sbjct: 185 E-LLDLCVLDVDCLEFPYGILAASAL---------YHFSSSELMQKVSGYQWCDIENCVK 234 Query: 243 CQEQIEAALRESLREASQTSSSPAPKAPRGSSSQGPSQTSTPTD 286 +RE + S K RG + + T D Sbjct: 235 WMVPFAMVIRE--------TGSSKLKHFRGVADEDAHNIQTHRD 270 >2F2C-A nrPDB Length = 254 Score = 280 bits (717), Expect = 4e-76, Method: Composition-based stats. Identities = 70/238 (29%), Positives = 114/238 (47%), Gaps = 1/238 (0%) Query: 14 RAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRC 73 RA D + D RVL +L +L E +P+ + +Q E+ R +L WM +CE Sbjct: 10 RAKIDSTTMKDPRVLNNL-KLRELLLPKFTSLWEIQTEVTVDNRTILLTWMHLLCESFEL 68 Query: 74 EEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVS 133 ++ VFPL+++ LDRYL K LQ +GA C+L+ SK+R P+T+ KL + + Sbjct: 69 DKSVFPLSVSILDRYLCKKQGTKKTLQKIGAACVLIGSKIRTVKPMTVSKLTYLSCDCFT 128 Query: 134 PRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDY 193 +L + E +L LKWD AV+A DFL + + L +P D + + A T + Sbjct: 129 NLELINQEKDILEALKWDTEAVLATDFLIPLCNALKIPEDLWPQLYEAASTTICKALIQP 188 Query: 194 TFAMYPPSMIATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCLRACQEQIEAAL 251 A+ P +I G + ++ E L+ I + +R ++Q+ A Sbjct: 189 NIALLSPGLICAGGLLTTIETDNTNCRPWTCYLEDLSSILNFSTNTVRTVKDQVSEAF 246 >3DDQ-B nrPDB Length = 269 Score = 265 bits (676), Expect = 2e-71, Method: Composition-based stats. Identities = 75/259 (28%), Positives = 121/259 (46%), Gaps = 12/259 (4%) Query: 26 RVLQSLLR-LEERYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNY 84 + + LR +E + P+ Y + Q +I MR +L W++EV EE + + E LA+NY Sbjct: 10 EDIHTYLREMEVKCKPKVGYMKK-QPDITNSMRAILVDWLVEVGEEYKLQNETLHLAVNY 68 Query: 85 LDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLV 144 +DR+LS + + +LQL+G MLLASK E P + + TD + +Q+ E LV Sbjct: 69 IDRFLSSMSVLRGKLQLVGTAAMLLASKFEEIYPPEVAEFVYITDDTYTKKQVLRMEHLV 128 Query: 145 LGKLKWDLAAVIAHDFLA-FILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMI 203 L L +DLAA + FL + LH+ ++L + L+L D + Y PS+I Sbjct: 129 LKVLAFDLAAPTINQFLTQYFLHQQPANCKVESLAMFLGE--LSLIDAD-PYLKYLPSVI 185 Query: 204 ATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREASQTS- 262 A + L +++G E L TG ++ L+ C + + + A Q+ Sbjct: 186 AAAAF-----HLALYTVTGQSWPESLVQKTGYTLETLKPCLLDLHQTYLRAPQHAQQSIR 240 Query: 263 SSPAPKAPRGSSSQGPSQT 281 G S P +T Sbjct: 241 EKYKNSKYHGVSLLNPPET 259 >3QHW-B nrPDB Length = 261 Score = 263 bits (673), Expect = 4e-71, Method: Composition-based stats. Identities = 74/239 (30%), Positives = 118/239 (49%), Gaps = 11/239 (4%) Query: 25 QRVLQSLLR-LEERYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMN 83 Q + + LR +E + P+ Y + Q +I MR +L W++EV EE + + E LA+N Sbjct: 8 QEDIHTYLREMEVKCKPKVGYMKR-QPDITNSMRAILVDWLVEVGEEYKLQNETLHLAVN 66 Query: 84 YLDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVL 143 Y+DR+LS + + +LQL+G MLLASK E P + + TD S +Q+ E L Sbjct: 67 YIDRFLSSMSVLRGKLQLVGTAAMLLASKFEEIYPPEVAEFVYITDDTYSKKQVLRMEHL 126 Query: 144 VLGKLKWDLAAVIAHDFLA-FILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSM 202 VL L +DLAA + FL + LH ++L + L+L D + Y PS+ Sbjct: 127 VLKVLAFDLAAPTVNQFLTQYFLHLQPANCKVESLAMFLGE--LSLIDAD-PYLKYLPSL 183 Query: 203 IATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREASQT 261 IA + L +++G E LA TG ++ L+ C + ++ + A Q+ Sbjct: 184 IAGAAF-----HLALYTVTGQSWPESLAQQTGYTLESLKPCLVDLHQTYLKAPQHAQQS 237 >4YC3-B nrPDB Length = 273 Score = 218 bits (556), Expect = 2e-57, Method: Composition-based stats. Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 15/220 (6%) Query: 31 LLRLEERYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLS 90 L +LEE R Y + RE+ +MR +L W+++V + R +E + ++ +DR++ Sbjct: 18 LRQLEEEQAVRPKYL--LGREVTGNMRAILIDWLVQVQMKFRLLQETMYMTVSIIDRFMQ 75 Query: 91 CVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKW 150 K LQL+G M +ASK E P I TD+ + Q+R E+ +L L + Sbjct: 76 NNSVPKKMLQLVGVTAMFIASKYEEMYPPEIGDFAFVTDNTYTKHQIRQMEMKILRALNF 135 Query: 151 DLAAVIAHDFLAFILHRLSLPRDRQALVKKH--AQTFLALCATDYTFAMYPPSMIATGSI 208 L + FL + + V++H A+ + L DY +PPS IA G+ Sbjct: 136 GLGRPLPLHFLR------RASKIGEVDVEQHTLAKYLMELTMLDYDMVHFPPSQIAAGAF 189 Query: 209 GAAVQGLGACSMSGDELTELLAGITGTEVDCLRACQEQIE 248 A++ L E T L + L + + Sbjct: 190 SLALKILD-----NGEWTPTLQHYLSYTEESLLPVMQHLA 224 >1KXU-A nrPDB Length = 333 Score = 52.5 bits (124), Expect = 2e-07, Method: Composition-based stats. Identities = 45/230 (19%), Positives = 84/230 (36%), Gaps = 27/230 (11%) Query: 37 RYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQR--CEEEVFPLAMNYLDRYLSCVPT 94 + +P F E+ + K +LE C + V A Y R+ Sbjct: 49 KVLPNDPVFLEPHEEMT--LCKYYEKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSV 106 Query: 95 RKAQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSP-------RQLRDWEVLVLGK 147 + +++ C LA K+ E + + SP Q+ ++E+L++ + Sbjct: 107 MEYHPRIIMLTCAFLACKVDEF---NVSSPQFVGNLRESPLGQEKALEQILEYELLLIQQ 163 Query: 148 LKWDLAAVIAHD----FLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMI 203 L + L + FL + R + + + +++K A FL A + +Y PS I Sbjct: 164 LNFHLIVHNPYRPFEGFLIDLKTRYPILENPE-ILRKTADDFLNRIALTDAYLLYTPSQI 222 Query: 204 ATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRE 253 A +I ++ G S L+E L R C Q+ ++ Sbjct: 223 ALTAILSSASRAGITMESY--LSESLMLKEN------RTCLSQLLDIMKS 264 >4NST-B nrPDB Length = 268 Score = 52.5 bits (124), Expect = 2e-07, Method: Composition-based stats. Identities = 39/244 (15%), Positives = 80/244 (32%), Gaps = 22/244 (9%) Query: 35 EERYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPT 94 ++ S + + + R+ A ++ +V + + Y R+ Sbjct: 29 KKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSF 88 Query: 95 RKAQLQLLGAVCMLLASKLRETTPLTIE-------------KLCIYTDHAVSPRQLRDWE 141 ++ + GA C+ LA K+ ET P + + + D ++ E Sbjct: 89 KQFPRYVTGACCLFLAGKVEET-PKKCKDIIKTARSLLNDVQFGQFGDD--PKEEVMVLE 145 Query: 142 VLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPS 201 ++L +K+DL + FL +L +++ + + A TF+ + P Sbjct: 146 RILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPE 205 Query: 202 MIATGSIGAAVQGLGACSMSGDELTELLAGITGTE---VDCLRACQEQIEAALRESLREA 258 +IA + A + C E T E D E I + + + Sbjct: 206 IIAVAVMYLAGR---LCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQG 262 Query: 259 SQTS 262 Q Sbjct: 263 KQQM 266 >5IYC-M nrPDB Length = 316 Score = 43.6 bits (101), Expect = 1e-04, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 48/112 (42%), Gaps = 7/112 (6%) Query: 102 LGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFL 161 + + C+ +A + +E P T +++C + +S +++ L+L L+ + + DF+ Sbjct: 159 IASACLYIACR-QEGVPRTFKEICAVS--RISKKEIGRCFKLILKALETSVDLITTGDFM 215 Query: 162 AFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQ 213 + L LP+ Q A+ + L P +A +I A Q Sbjct: 216 SRFCSNLCLPKQVQMAATHIARKAVELDLVPGR----SPISVAAAAIYMASQ 263 >2PK2-A nrPDB Length = 358 Score = 42.1 bits (97), Expect = 3e-04, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 75/243 (30%), Gaps = 26/243 (10%) Query: 35 EERYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPT 94 E+ S V + + R+ A + ++ + + A+ Y+ R+ Sbjct: 16 REQLENSPSRRFGVDPDKELSYRQQAANLLQDMGQRLNVSQLTINTAIVYMHRFYMIQSF 75 Query: 95 RKAQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQ----------------LR 138 + + + LA+K+ E P +E + + P++ L Sbjct: 76 TRFPGNSVAPAALFLAAKVEE-QPKKLEHVIKVAHTCLHPQESLPDTRSEAYLQQVQDLV 134 Query: 139 DWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMY 198 E ++L L ++L H + + +D A L L Y Sbjct: 135 ILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLAQTSYFMATNSLHLTTFS---LQY 191 Query: 199 PPSMIATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREA 258 P ++A I A C S E+ G E E ++ E L+ Sbjct: 192 TPPVVACVCIHLA------CKWSNWEIPVSTDGKHWWEYVDATVTLELLDELTHEFLQIL 245 Query: 259 SQT 261 +T Sbjct: 246 EKT 248 >5WH1-A nrPDB Length = 211 Score = 42.1 bits (97), Expect = 3e-04, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 48/112 (42%), Gaps = 7/112 (6%) Query: 102 LGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFL 161 + + C+ +A + +E P T +++C + +S +++ L+L L+ + + DF+ Sbjct: 54 IASACLYIACR-QEGVPRTFKEICAVS--RISKKEIGRCFKLILKALETSVDLITTGDFM 110 Query: 162 AFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQ 213 + L LP+ Q A+ + L P +A +I A Q Sbjct: 111 SRFCSNLCLPKQVQMAATHIARKAVELDLVPGR----SPISVAAAAIYMASQ 158 >3MIA-B nrPDB Length = 266 Score = 40.5 bits (93), Expect = 8e-04, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 75/243 (30%), Gaps = 26/243 (10%) Query: 35 EERYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPT 94 E+ S V + + R+ A + ++ + + A+ Y+ R+ Sbjct: 16 REQLENSPSRRFGVDPDKELSYRQQAANLLQDMGQRLNVSQLTINTAIVYMHRFYMIQSF 75 Query: 95 RKAQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQ----------------LR 138 + + + LA+K+ E P +E + + P++ L Sbjct: 76 TQFPGNSVAPAALFLAAKVEE-QPKKLEHVIKVAHTCLHPQESLPDTRSEAYLQQVQDLV 134 Query: 139 DWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMY 198 E ++L L ++L H + + +D A L L Y Sbjct: 135 ILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLAQTSYFMATNSLHLTTFS---LQY 191 Query: 199 PPSMIATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREA 258 P ++A I A C S E+ G E E ++ E L+ Sbjct: 192 TPPVVACVCIHLA------CKWSNWEIPVSTDGKHWWEYVDATVTLELLDELTHEFLQIL 245 Query: 259 SQT 261 +T Sbjct: 246 EKT 248 >6GZH-B nrPDB Length = 726 Score = 40.5 bits (93), Expect = 9e-04, Method: Composition-based stats. Identities = 38/277 (13%), Positives = 88/277 (31%), Gaps = 25/277 (9%) Query: 35 EERYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPT 94 E+ S V + + R+ A + ++ + + A+ Y+ R+ Sbjct: 16 REQLENSPSRRFGVDPDKELSYRQQAANLLQDMGQRLNVSQLTINTAIVYMHRFYMIQSF 75 Query: 95 RKAQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQ----------------LR 138 + + + LA+K+ E P +E + + P++ L Sbjct: 76 TRFPGNSVAPAALFLAAKV-EGQPKKLEHVIKVAHTCLHPQESLPDTRSEAYLQQVQDLV 134 Query: 139 DWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMY 198 E ++L L ++L H + + +D A L L Y Sbjct: 135 ILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLAQTSYFMATNSLHLTTFS---LQY 191 Query: 199 PPSMIATGSIGAAVQGLG---ACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESL 255 P ++A I A + S G E + ++ L ++ L ++ Sbjct: 192 TPPVVACVCIHLACKWSNWEIPVSTDGKHWWEYVDATV--TLELLDELTHELLQILEKTP 249 Query: 256 REASQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIHL 292 + + A +A + + + ++ T +++ Sbjct: 250 NRLKRIWNWRACEAAKKTKADDRGTDEKTSEQTILNM 286 >2IVX-A nrPDB Length = 257 Score = 39.8 bits (91), Expect = 0.002, Method: Composition-based stats. Identities = 43/244 (17%), Positives = 77/244 (31%), Gaps = 28/244 (11%) Query: 35 EERYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPT 94 E+ S V+ + + R+ A + E+ + + A+ Y+ R+ Sbjct: 9 REQLENTPSRRCGVEADKELSCRQQAANLIQEMGQRLNVSQLTINTAIVYMHRFYMHHSF 68 Query: 95 RKAQLQLLGAVCMLLASKLRE---------------TTPLTIEKLCIYTDHAV--SPRQL 137 K ++ + + LA+K+ E PL L A R+L Sbjct: 69 TKFNKNIISSTALFLAAKVEEQARKLEHVIKVAHACLHPLE--PLLDTKCDAYLQQTREL 126 Query: 138 RDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAM 197 E ++L L +++ H + + +D A L L Sbjct: 127 VILETIMLQTLGFEITIEHPHTDVVKCTQLVRASKDLAQTSYFMATNSLHLTTF---CLQ 183 Query: 198 YPPSMIATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLRE 257 Y P++IA I A C S E+ G E E ++ E L+ Sbjct: 184 YKPTVIACVCIHLA------CKWSNWEIPVSTDGKHWWEYVDPTVTLELLDELTHEFLQI 237 Query: 258 ASQT 261 +T Sbjct: 238 LEKT 241 >4F7N-B nrPDB Length = 287 Score = 35.9 bits (81), Expect = 0.021, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 35/88 (39%) Query: 28 LQSLLRLEERYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDR 87 LQ +L ++ R + + E ++ + + E + ++V A Y R Sbjct: 16 LQWILDKQDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKR 75 Query: 88 YLSCVPTRKAQLQLLGAVCMLLASKLRE 115 + + + L+ C+ LASK+ E Sbjct: 76 FYARYSLKSIDPVLMAPTCVFLASKVEE 103 >4I6V-A nrPDB Length = 434 Score = 31.3 bits (69), Expect = 0.50, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 58/186 (31%), Gaps = 28/186 (15%) Query: 58 KMLAYWMLEVCEEQ------RCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLAS 111 + W++E+CE R + + ++ ++ +S + LQ + L + Sbjct: 88 TIQVKWLIELCERFFGFQDDRLTPDNWEALYDHSEKLMSAPDWEQTVLQKSQLEAVFLTN 147 Query: 112 KLRETTPLTIEKL-----CIYTDHAVSPRQLRDWEVLVLGKLKWDLAAV--IAHDFLAFI 164 + PLT C+ TD V Q + + +D A + H Sbjct: 148 DFDD--PLTGFDTKKYIPCLRTDDLVFHLQKPEVRQRLAKATGFDCATPAKLIHAIGQLF 205 Query: 165 LHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMI-ATGSIGAAVQGLGACSMSGD 223 H +S + F P S + A G + AA G + Sbjct: 206 THFVSHGAKA------------CAISLPPDFEPTPVSHVDAEGPLRAAYAGHVLTTEQSQ 253 Query: 224 ELTELL 229 L+ + Sbjct: 254 ILSRFV 259 >6CN0-A nrPDB Length = 284 Score = 30.9 bits (68), Expect = 0.70, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 52/168 (30%), Gaps = 24/168 (14%) Query: 104 AVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVI------- 156 +L + K P T+ ++ P+QL E V KL A I Sbjct: 15 TAKVLTSGKYSTLYPPTVRRVTERLFDRYPPKQL---EKEVRKKLHQAYGAYIGGIDGKR 71 Query: 157 AHDFLAFILHRLSLPRDRQA------------LVKKHAQTFLALCATDYTFAMYPPSMIA 204 + I+H + P +A ++ H T A D + Sbjct: 72 LEKKIEKIIHEIPNPTTDEATRTEWEKEICLKILNLHTSTNERTVAYDELYQKIFEVTGV 131 Query: 205 TGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCLRACQEQIEAALR 252 SI A L S +L G ++D + E IE +LR Sbjct: 132 PTSITDAGCALNPFSFPFFTEAGMLGQYIGFDLD--KGMIEAIEHSLR 177 >5ISU-A nrPDB Length = 502 Score = 29.0 bits (63), Expect = 2.4, Method: Composition-based stats. Identities = 12/73 (16%), Positives = 24/73 (32%), Gaps = 1/73 (1%) Query: 126 IYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTF 185 +TD + Q ++ + +D + + +L + S+ Q K+ Sbjct: 312 YFTDKVETYDQDIAKAKKLVKESGFDTSQKLTVYYLNNSKSQESIALYLQQQYKEIG-VT 370 Query: 186 LALCATDYTFAMY 198 L L TD Sbjct: 371 LDLKPTDPNALSN 383 >4RVC-A nrPDB Length = 245 Score = 29.0 bits (63), Expect = 2.8, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 24/78 (30%) Query: 123 KLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKHA 182 + + V +L E L L + + L+ L +L L R + + Sbjct: 77 QFAYIPETPVLYEELTLEEHLRLAAMAYGLSEAEYERRLPPLLREFRLERRLSSFPAHFS 136 Query: 183 QTFLALCATDYTFAMYPP 200 + F + PP Sbjct: 137 KGMKQKVMIVCAFLLEPP 154 >2YF0-A nrPDB Length = 512 Score = 29.0 bits (63), Expect = 2.8, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 23/55 (41%), Gaps = 5/55 (9%) Query: 82 MNYLDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPL-----TIEKLCIYTDHA 131 + LDR+ + + L L + + S +ET L ++EKL + T Sbjct: 12 VKLLDRFSTSNKSLTGTLYLTATHLLFIDSHQKETWILHHHIASVEKLALTTSGC 66 >5AZI-A nrPDB Length = 518 Score = 28.6 bits (62), Expect = 3.6, Method: Composition-based stats. Identities = 8/35 (22%), Positives = 13/35 (37%), Gaps = 5/35 (14%) Query: 50 REIKPHMRKMLAY-----WMLEVCEEQRCEEEVFP 79 ++ R L W E+CE+ + E P Sbjct: 191 TDVTNASRTFLMDLRTRKWSPELCEKLKIPMETLP 225 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.309 0.125 0.307 Lambda K H 0.267 0.0384 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,005,240 Number of Sequences: 36641 Number of extensions: 290647 Number of successful extensions: 887 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 28 Number of HSP's successfully gapped in prelim test: 10 Number of HSP's that attempted gapping in prelim test: 838 Number of HSP's gapped (non-prelim): 41 length of query: 292 length of database: 10,336,785 effective HSP length: 96 effective length of query: 196 effective length of database: 6,819,249 effective search space: 1336572804 effective search space used: 1336572804 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 58 (27.0 bits)