BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P29972 (269 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1IH5-A nrPDB 542 e-155 1J4N-A nrPDB 497 e-141 1YMG-A nrPDB 238 3e-63 4OJ2-X nrPDB 234 3e-62 4NEF-A nrPDB 233 5e-62 3M9I-A nrPDB 226 9e-60 2ZZ9-A nrPDB 222 1e-58 3IYZ-A nrPDB 222 1e-58 3D9S-A nrPDB 219 1e-57 3GD8-A nrPDB 214 4e-56 3CLL-A nrPDB 173 9e-44 5I32-A nrPDB 145 1e-35 2W1P-A nrPDB 107 8e-24 3LLQ-A nrPDB 99 2e-21 2O9F-A nrPDB 98 3e-21 2EVU-A nrPDB 87 1e-17 3NE2-A nrPDB 80 9e-16 1LDI-A nrPDB 71 4e-13 6F7H-A nrPDB 61 6e-10 3C02-A nrPDB 48 5e-06 6NB2-A nrPDB 29 2.5 5L77-A nrPDB 29 2.5 1XMX-A nrPDB 28 3.1 3ILX-A nrPDB 28 5.8 3S2F-A nrPDB 27 8.7 >1IH5-A nrPDB Length = 269 Score = 542 bits (1396), Expect = e-155, Method: Compositional matrix adjust. Identities = 269/269 (100%), Positives = 269/269 (100%) Query: 1 MASEFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSI 60 MASEFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSI Sbjct: 1 MASEFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSI 60 Query: 61 ATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLT 120 ATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLT Sbjct: 61 ATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLT 120 Query: 121 GNSLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGH 180 GNSLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGH Sbjct: 121 GNSLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGH 180 Query: 181 LLAIDYTGCGINPARSFGSAVITHNFSNHWIFWVGPFIGGALAVLIYDFILAPRSSDLTD 240 LLAIDYTGCGINPARSFGSAVITHNFSNHWIFWVGPFIGGALAVLIYDFILAPRSSDLTD Sbjct: 181 LLAIDYTGCGINPARSFGSAVITHNFSNHWIFWVGPFIGGALAVLIYDFILAPRSSDLTD 240 Query: 241 RVKVWTSGQVEEYDLDADDINSRVEMKPK 269 RVKVWTSGQVEEYDLDADDINSRVEMKPK Sbjct: 241 RVKVWTSGQVEEYDLDADDINSRVEMKPK 269 >1J4N-A nrPDB Length = 271 Score = 497 bits (1279), Expect = e-141, Method: Compositional matrix adjust. Identities = 248/271 (91%), Positives = 255/271 (94%), Gaps = 2/271 (0%) Query: 1 MASEFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQT--AVQDNVKVSLAFGL 58 MASEFKKKLFWRAVVAEFLA LF+FISIGSALGF YP+ +NQT AVQDNVKVSLAFGL Sbjct: 1 MASEFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGL 60 Query: 59 SIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSS 118 SIATLAQSVGHISGAHLNPAVTLGLLLSCQIS+ RA+MYIIAQCVGAIVATAILSGITSS Sbjct: 61 SIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSS 120 Query: 119 LTGNSLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVAL 178 L NSLG N LA GVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGS PLAIG SVAL Sbjct: 121 LPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSGPLAIGFSVAL 180 Query: 179 GHLLAIDYTGCGINPARSFGSAVITHNFSNHWIFWVGPFIGGALAVLIYDFILAPRSSDL 238 GHLLAIDYTGCGINPARSFGS+VITHNF +HWIFWVGPFIG ALAVLIYDFILAPRSSDL Sbjct: 181 GHLLAIDYTGCGINPARSFGSSVITHNFQDHWIFWVGPFIGAALAVLIYDFILAPRSSDL 240 Query: 239 TDRVKVWTSGQVEEYDLDADDINSRVEMKPK 269 TDRVKVWTSGQVEEYDLDADDINSRVEMKPK Sbjct: 241 TDRVKVWTSGQVEEYDLDADDINSRVEMKPK 271 >1YMG-A nrPDB Length = 263 Score = 238 bits (606), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 116/266 (43%), Positives = 167/266 (62%), Gaps = 7/266 (2%) Query: 4 EFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATL 63 E + FWRA+ AEF A+ +VF +G++L ++ G ++V+LAFGL++ATL Sbjct: 3 ELRSASFWRAICAEFFASLFYVFFGLGASL--RWAPGPLHV-----LQVALAFGLALATL 55 Query: 64 AQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNS 123 Q+VGHISGAH+NPAVT L+ Q+S+ RA+ Y++AQ +GA+ A+L +T + Sbjct: 56 VQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGN 115 Query: 124 LGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGHLLA 183 L N L GV+ GQ +EI TLQ VLC+ AT D RR GS LA+G S+ LGHL Sbjct: 116 LALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFG 175 Query: 184 IDYTGCGINPARSFGSAVITHNFSNHWIFWVGPFIGGALAVLIYDFILAPRSSDLTDRVK 243 + YTG G+NPARSF A++T NF+NHW++WVGP IG L L+YDF+L PR +++R+ Sbjct: 176 MYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPRLKSVSERLS 235 Query: 244 VWTSGQVEEYDLDADDINSRVEMKPK 269 + + E + + VE+K + Sbjct: 236 ILKGSRPSESNGQPEVTGEPVELKTQ 261 >4OJ2-X nrPDB Length = 274 Score = 234 bits (597), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 117/260 (45%), Positives = 166/260 (63%), Gaps = 8/260 (3%) Query: 4 EFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATL 63 E + F RAV AEFLAT LFVF +GSAL N A+ +++++AFGL I TL Sbjct: 6 ELRSIAFSRAVFAEFLATLLFVFFGLGSAL-------NWPQALPSVLQIAMAFGLGIGTL 58 Query: 64 AQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNS 123 Q++GHISGAH+NPAVT+ L+ C +S+ RA Y+ AQ +GA+ A+L IT + Sbjct: 59 VQALGHISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGD 118 Query: 124 LGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGHLLA 183 L N L++ +GQ + +E+ TLQLVLC+ A+TD RR + G+ L+IG SVALGHLL Sbjct: 119 LAVNALSNSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLG 178 Query: 184 IDYTGCGINPARSFGSAVITHNFSNHWIFWVGPFIGGALAVLIYDFILAPRSSDLTDRVK 243 I YTGC +NPARS AV+T F +HW+FW+GP +G L L+Y+++L P + L++R+ Sbjct: 179 IHYTGCSMNPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNYVLFPPAKSLSERLA 238 Query: 244 VWTSGQVEEYDLDADDINSR 263 V G + D + ++ R Sbjct: 239 V-LKGLEPDTDWEEREVRRR 257 >4NEF-A nrPDB Length = 242 Score = 233 bits (595), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 115/242 (47%), Positives = 160/242 (66%), Gaps = 7/242 (2%) Query: 3 SEFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIAT 62 SE + F RAV AEFLAT LFVF +GSAL N A+ +++++AFGL I T Sbjct: 2 SELRSIAFSRAVFAEFLATLLFVFFGLGSAL-------NWPQALPSVLQIAMAFGLGIGT 54 Query: 63 LAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGN 122 L Q++GHISGAH+NPAVT+ L+ C +S+ RA Y+ AQ +GA+ A+L IT + Sbjct: 55 LVQALGHISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRG 114 Query: 123 SLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGHLL 182 L N L++ +GQ + +E+ TLQLVLC+ A+TD RR + G+ L+IG SVALGHLL Sbjct: 115 DLAVNALSNSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLL 174 Query: 183 AIDYTGCGINPARSFGSAVITHNFSNHWIFWVGPFIGGALAVLIYDFILAPRSSDLTDRV 242 I YTGC +NPARS AV+T F +HW+FW+GP +G L L+Y+++L P + L++R+ Sbjct: 175 GIHYTGCSMNPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNYVLFPPAKSLSERL 234 Query: 243 KV 244 V Sbjct: 235 AV 236 >3M9I-A nrPDB Length = 220 Score = 226 bits (575), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 111/225 (49%), Positives = 150/225 (66%), Gaps = 7/225 (3%) Query: 10 FWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGH 69 FWRA+ AEF AT +VF +G++L ++ G ++V+LAFGL++ATL Q+VGH Sbjct: 3 FWRAIFAEFFATLFYVFFGLGASL--RWAPGPLHV-----LQVALAFGLALATLVQAVGH 55 Query: 70 ISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNSLGRNDL 129 ISGAH+NPAVT L+ Q+S+ RA+ Y++AQ +GA+ A+L +T +L N L Sbjct: 56 ISGAHVNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTL 115 Query: 130 ADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGHLLAIDYTGC 189 GV+ GQ +EI TLQ VLC+ AT D RR GS LA+G S+ LGHL + YTG Sbjct: 116 HPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTGA 175 Query: 190 GINPARSFGSAVITHNFSNHWIFWVGPFIGGALAVLIYDFILAPR 234 G+NPARSF A++T NF+NHW++WVGP IG L L+YDF+L PR Sbjct: 176 GMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPR 220 >2ZZ9-A nrPDB Length = 301 Score = 222 bits (566), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 117/263 (44%), Positives = 166/263 (63%), Gaps = 7/263 (2%) Query: 8 KLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSV 67 + FW+AV AEFLA +FV +S+GS + + G+ D V +SL FGLSIAT+ Q Sbjct: 10 QAFWKAVTAEFLAMLIFVLLSVGSTINWG---GSENPLPVDMVLISLCFGLSIATMVQCF 66 Query: 68 GHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNSLGRN 127 GHISG H+NPAVT+ ++ + +ISI +++ YI AQC+GAI+ IL +T LG Sbjct: 67 GHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVT 126 Query: 128 DLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGHLLAIDYT 187 + + +G GL +E+I T QLV + A+ D +R D+ GS LAIG SVA+GHL AI+YT Sbjct: 127 TVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTGSVALAIGFSVAIGHLFAINYT 186 Query: 188 GCGINPARSFGSAVITHNFSNHWIFWVGPFIGGALAVLIYDFILAPRSSDLTDRVKVWTS 247 G +NPARSFG AVI N+ NHWI+WVGP IG LA +Y+++ P +L R+K S Sbjct: 187 GASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCP-DVELKRRLKEAFS 245 Query: 248 GQVEEYD---LDADDINSRVEMK 267 ++ ++ +D S+VE + Sbjct: 246 KAAQQTKGSYMEVEDNRSQVETE 268 >3IYZ-A nrPDB Length = 340 Score = 222 bits (566), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 117/263 (44%), Positives = 166/263 (63%), Gaps = 7/263 (2%) Query: 8 KLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSV 67 + FW+AV AEFLA +FV +S+GS + + G+ D V +SL FGLSIAT+ Q Sbjct: 49 QAFWKAVTAEFLAMLIFVLLSVGSTINWG---GSENPLPVDMVLISLCFGLSIATMVQCF 105 Query: 68 GHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNSLGRN 127 GHISG H+NPAVT+ ++ + +ISI +++ YI AQC+GAI+ IL +T LG Sbjct: 106 GHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVT 165 Query: 128 DLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGHLLAIDYT 187 + + +G GL +E+I T QLV + A+ D +R D+ GS LAIG SVA+GHL AI+YT Sbjct: 166 TVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTGSVALAIGFSVAIGHLFAINYT 225 Query: 188 GCGINPARSFGSAVITHNFSNHWIFWVGPFIGGALAVLIYDFILAPRSSDLTDRVKVWTS 247 G +NPARSFG AVI N+ NHWI+WVGP IG LA +Y+++ P +L R+K S Sbjct: 226 GASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCP-DVELKRRLKEAFS 284 Query: 248 GQVEEYD---LDADDINSRVEMK 267 ++ ++ +D S+VE + Sbjct: 285 KAAQQTKGSYMEVEDNRSQVETE 307 >3D9S-A nrPDB Length = 266 Score = 219 bits (557), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 122/259 (47%), Positives = 165/259 (63%), Gaps = 12/259 (4%) Query: 10 FWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGH 69 F +AV AEFLAT +FVF +GSAL K+P +A+ ++++LAFGL+I TLAQ++G Sbjct: 11 FLKAVFAEFLATLIFVFFGLGSAL--KWP-----SALPTILQIALAFGLAIGTLAQALGP 63 Query: 70 ISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNSLGRNDL 129 +SG H+NPA+TL LL+ QIS+ RA Y+ AQ VGAI IL G+ +L N L Sbjct: 64 VSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNAL 123 Query: 130 ADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGHLLAIDYTGC 189 + GQ + +E+I T QL LC+ A+TD RR GS L+IGLSV LGHL+ I +TGC Sbjct: 124 NNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTGC 183 Query: 190 GINPARSFGSAVITHNFSN-HWIFWVGPFIGGALAVLIYDFILAPRSSDLTDRVKVWTSG 248 +NPARSFG AV+ + FS HW+FWVGP +G LA ++Y ++L P S L++RV + Sbjct: 184 SMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLSLSERVAIIKG- 242 Query: 249 QVEEYDLDADDINSRVEMK 267 Y+ D D R E K Sbjct: 243 ---TYEPDEDWEEQREERK 258 >3GD8-A nrPDB Length = 223 Score = 214 bits (544), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 109/226 (48%), Positives = 149/226 (65%), Gaps = 3/226 (1%) Query: 8 KLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSV 67 + FW+AV AEFLA +FV +S+GS + + G + D V +SL FGLSIAT+ Q Sbjct: 1 QAFWKAVTAEFLAMLIFVLLSLGSTINWG---GTEKPLPVDMVLISLCFGLSIATMVQCF 57 Query: 68 GHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNSLGRN 127 GHISG H+NPAVT+ ++ + +ISI +++ YI AQC+GAI+ IL +T LG Sbjct: 58 GHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVT 117 Query: 128 DLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGHLLAIDYT 187 + + +G GL +E+I T QLV + A+ D +R D+ GS LAIG SVA+GHL AI+YT Sbjct: 118 MVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIALAIGFSVAIGHLFAINYT 177 Query: 188 GCGINPARSFGSAVITHNFSNHWIFWVGPFIGGALAVLIYDFILAP 233 G +NPARSFG AVI N+ NHWI+WVGP IG LA +Y+++ P Sbjct: 178 GASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYVFCP 223 >3CLL-A nrPDB Length = 300 Score = 173 bits (438), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 106/242 (43%), Positives = 145/242 (59%), Gaps = 22/242 (9%) Query: 4 EFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVK---VSLAFGLSI 60 E K FWRA +AEF+AT LF++I++ + +G + +T V +V ++ AFG I Sbjct: 50 ELKLWSFWRAAIAEFIATLLFLYITVATVIGH-----SKETVVCGSVGLLGIAWAFGGMI 104 Query: 61 ATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAI----VATAILSGIT 116 L ISG H+NPAVT GL L+ ++ + RAL+Y+IAQC+GAI + A + G Sbjct: 105 FVLVYCTAGISGGHINPAVTFGLFLARKVELLRALVYMIAQCLGAICGVGLVKAFMKGPY 164 Query: 117 SSLTGNSLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAI 172 + G G N +A G N G LG EIIGT LV V + TD +R RD + APL I Sbjct: 165 NQFGG---GANSVALGYNKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPILAPLPI 221 Query: 173 GLSVALGHLLAIDYTGCGINPARSFGSAVITHN---FSNHWIFWVGPFIGGALAVLIYDF 229 G +V + HL I TG GINPARSFG+AVI ++ + + WIFWVGPFIG A+A + + Sbjct: 222 GFAVFMVHLATIPITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQY 281 Query: 230 IL 231 +L Sbjct: 282 VL 283 >5I32-A nrPDB Length = 275 Score = 145 bits (367), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 89/217 (41%), Positives = 127/217 (58%), Gaps = 4/217 (1%) Query: 12 RAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGHIS 71 RA +AEF++T LFVF +GSA+ + + V +++ G ++ +IS Sbjct: 44 RAYLAEFISTLLFVFAGVGSAIAYAKLTSDAALDTPGLVAIAVCHGFALFVAVAIGANIS 103 Query: 72 GAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNSLGRNDLAD 131 G H+NPAVT GL + QI++ + Y IAQ +G+ A +L +T L ++ + +A Sbjct: 104 GGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLKYVTGGL---AVPTHSVAA 160 Query: 132 GVNSGQGLGIEIIGTLQLVLCVLATT-DRRRRDLGGSAPLAIGLSVALGHLLAIDYTGCG 190 G+ S +G+ +EII T LV V AT D ++ LG APLAIGL V L A ++G Sbjct: 161 GLGSIEGVVMEIIITFALVYTVYATAADPKKGSLGTIAPLAIGLIVGANILAAGPFSGGS 220 Query: 191 INPARSFGSAVITHNFSNHWIFWVGPFIGGALAVLIY 227 +NPARSFG AV +FS HW++WVGP IGG LA LIY Sbjct: 221 MNPARSFGPAVAAGDFSGHWVYWVGPLIGGGLAGLIY 257 >2W1P-A nrPDB Length = 279 Score = 107 bits (266), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 77/224 (34%), Positives = 109/224 (48%), Gaps = 17/224 (7%) Query: 13 AVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDN-------VKVSLAFGLSIATLAQ 65 A+ EF+ T LF++ + A + N D + +S FG + Sbjct: 47 AMSGEFVGTFLFLWSAFVIAQ-----IANQAPETPDGGSNPAQLIMISFGFGFGVMVGVF 101 Query: 66 SVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNSLG 125 +SG +LNPAVTL L+L+ I FR ++ Q V + A S +T G Sbjct: 102 ITYRVSGGNLNPAVTLALVLARAIPPFRGILMAFTQIVAGMAAAGAASAMTP---GEIAF 158 Query: 126 RNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGHLLAID 185 N L G + +GL +E GT L L VL + R AP IG+++ + HL+ I Sbjct: 159 ANALGGGASRTRGLFLEAFGTAILCLTVLMLAVEKHRATW-FAPFVIGIALLIAHLICIY 217 Query: 186 YTGCGINPARSFGSAVITHNFSN-HWIFWVGPFIGGALAVLIYD 228 YTG G+NPARSFG AV +F N HWI+W+GP +G LA I+ Sbjct: 218 YTGAGLNPARSFGPAVAARSFPNYHWIYWLGPILGAFLAYSIWQ 261 >3LLQ-A nrPDB Length = 256 Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 84/233 (36%), Positives = 124/233 (53%), Gaps = 15/233 (6%) Query: 5 FKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLA 64 F+ + R ++AEF T VF GSA+ + + + V+LAFGL++ T+A Sbjct: 24 FQSYVMGRKLLAEFFGTFWLVFGGCGSAV---FAAAFPELGI-GFTGVALAFGLTVLTMA 79 Query: 65 QSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNSL 124 +VG ISG H NPAV++GL ++ + + Y+IAQ GAIVA A L I + G L Sbjct: 80 YAVGGISGGHFNPAVSVGLTVAGRFPASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDL 139 Query: 125 G---RNDLADGVNSG----QGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVA 177 G N + G L IEII T ++ +L +T R G AP+AIGL++ Sbjct: 140 GGFASNGYGEHSPGGYSLVSALLIEIILTAFFLIVILGSTHGRVPA--GFAPIAIGLALT 197 Query: 178 LGHLLAIDYTGCGINPARSFGSAVITHNFS--NHWIFWVGPFIGGALAVLIYD 228 L HL++I T +NPARS G A+ ++ W+FW+ P +GGA +I+ Sbjct: 198 LIHLISIPVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPIVGGAAGAVIWK 250 >2O9F-A nrPDB Length = 234 Score = 98.2 bits (243), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 76/214 (35%), Positives = 107/214 (50%), Gaps = 19/214 (8%) Query: 12 RAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGHIS 71 R + AE T VF GSA+ G + + V+LAFGL++ T+A +VGHIS Sbjct: 6 RKLAAESFGTFWLVFGGSGSAV---LAAGFPELGI-GFAGVALAFGLTVLTMAFAVGHIS 61 Query: 72 GAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTG---------- 121 G H NPAVT+GL + + Y+IAQ VG IVA A+L I S TG Sbjct: 62 GGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFAS 121 Query: 122 NSLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGHL 181 N G + G + L +E++ + +L + TD+ G AP+AIGL+ L HL Sbjct: 122 NGYGEHS-PGGYSMLSALVVELVLSAGFLLVIHGATDKFAPA--GFAPIAIGLACTLIHL 178 Query: 182 LAIDYTGCGINPARSFGSAVITHNFS--NHWIFW 213 ++I T +NPARS A+ ++ W FW Sbjct: 179 ISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFW 212 >2EVU-A nrPDB Length = 246 Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 79/246 (32%), Positives = 122/246 (49%), Gaps = 35/246 (14%) Query: 12 RAVVAEFLATTLFVFISIGSAL-------GFKYPVGNNQTAVQ-----DNVKVSLAFGLS 59 + +AEF+ T + VF GSA G P N D V + LAFG + Sbjct: 6 KRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFA 65 Query: 60 IATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAIL---SGIT 116 IA ++G+ISG H+NPAVT+GL + + YIIAQ +GA + I +GI Sbjct: 66 IAASIYALGNISGCHINPAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIG 125 Query: 117 SSLTGNSLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLA-TTDRRRRDLGGSAPLAIGLS 175 ++ G LG G++ Q + E++GT L++ ++ D R G A + IGL+ Sbjct: 126 AATVGG-LGATAPFPGISYWQAMLAEVVGTFLLMITIMGIAVDERAPK--GFAGIIIGLT 182 Query: 176 VA-----LGHLLAIDYTGCGINPARSFGSAVITHNFS-----NHW-IFWVGPFIGGALAV 224 VA LG++ +G +NPAR+FG + F+ N++ I+ +GP +G LA Sbjct: 183 VAGIITTLGNI-----SGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAA 237 Query: 225 LIYDFI 230 L Y ++ Sbjct: 238 LTYQYL 243 Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 15/121 (12%) Query: 3 SEFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIAT 62 + F +W+A++AE + T L + +G A+ + P G + GL++A Sbjct: 136 APFPGISYWQAMLAEVVGTFLLMITIMGIAVDERAPKG----------FAGIIIGLTVAG 185 Query: 63 LAQSVGHISGAHLNPAVTLGLLLSCQISIFRAL-----MYIIAQCVGAIVATAILSGITS 117 + ++G+ISG+ LNPA T G L+ I L +Y+I VGA++A +TS Sbjct: 186 IITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTYQYLTS 245 Query: 118 S 118 Sbjct: 246 E 246 >3NE2-A nrPDB Length = 246 Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 62/191 (32%), Positives = 100/191 (52%), Gaps = 10/191 (5%) Query: 48 DNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIV 107 D + +AF L+IA + S+G ISGAH+NPAVT+ L + + YI+AQ +GA + Sbjct: 55 DWFAIGMAFALAIAAVIYSLGRISGAHINPAVTIALWSIGRFPGREVVPYIVAQFIGAAL 114 Query: 108 ATAILSGIT--SSLTGNSLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLG 165 + + ++ T LG G+ GQ + E IGT L+L ++ R Sbjct: 115 GSLLFLACVGPAAATVGGLGATAPFPGIGYGQAILTEAIGTFLLMLVIMGVAVDERAP-P 173 Query: 166 GSAPLAIGLSVALGHLLAI-DYTGCGINPARSFGS----AVITHNFSNHW-IFWVGPFIG 219 G A L IGL+V G + I + TG +NPAR+FG +++ N ++ I+ +GP +G Sbjct: 174 GFAGLVIGLTVG-GIITTIGNITGSSLNPARTFGPYLGDSLMGINLWQYFPIYVIGPIVG 232 Query: 220 GALAVLIYDFI 230 A +Y+++ Sbjct: 233 AVAAAWLYNYL 243 >1LDI-A nrPDB Length = 281 Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 64/206 (31%), Positives = 93/206 (45%), Gaps = 24/206 (11%) Query: 15 VAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGHISGAH 74 +AEFL T L +F +G K A ++S+ +GL +A +SGAH Sbjct: 12 IAEFLGTGLLIFFGVGCVAALKV-----AGASFGQWEISVIWGLGVAMAIYLTAGVSGAH 66 Query: 75 LNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGI----------TSSLTGNSL 124 LNPAVT+ L L + + +I++Q GA A A++ G+ T + S+ Sbjct: 67 LNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSV 126 Query: 125 GRNDLA--------DGVNSGQGLGIEIIGTLQLVLCVLATTDRRRR-DLGGSAPLAIGLS 175 DLA +N Q +E++ T L+ +LA TD G APL IGL Sbjct: 127 ESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRGPLAPLLIGLL 186 Query: 176 VALGHLLAIDYTGCGINPARSFGSAV 201 +A+ TG +NPAR FG V Sbjct: 187 IAVIGASMGPLTGFAMNPARDFGPKV 212 >6F7H-A nrPDB Length = 301 Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 68/292 (23%), Positives = 123/292 (42%), Gaps = 39/292 (13%) Query: 7 KKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQS 66 + L R +AEFL + + ++ G+ V + +T + + LA L++ Sbjct: 17 RSLLARQCLAEFLGVFVLMLLTQGAV---AQAVTSGETK-GNFFTMFLAGSLAVTIAIYV 72 Query: 67 VGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNSLGR 126 G++SGAHLNPA +L + + ++ + +YI+ Q + A A+ + N G Sbjct: 73 GGNVSGAHLNPAFSLAMCIVGRLPWVKLPIYILVQLLSAFCASGATYVLYHDALQNYTGG 132 Query: 127 NDLADGVNS---------------GQGLGIEIIGTLQLVLCVLATTDRRRRDL-GGSAPL 170 N G G +++GT L++ +LA DRR + + G P+ Sbjct: 133 NLTVTGPKETASIFATYPAPYLSLNNGFLDQVLGTGMLIVGLLAILDRRNKGVPAGLEPV 192 Query: 171 AIGLSV-ALGHLLAIDYTGCGI--NPARSFGSAVITH---------NFSNHWIFW---VG 215 +G+ + ALG + + CGI NPAR G + T+ + N W +W V Sbjct: 193 VVGMLILALGLSMGAN---CGIPLNPARDLGPRLFTYVAGWGPEVFSAGNGW-WWVPVVA 248 Query: 216 PFIGGALAVLIYDFILAPRSSDLTDRVKVWTSGQVEEYDLDADDINSRVEMK 267 P +G + Y ++A + + + S Q + +L+ +E K Sbjct: 249 PLVGATVGTATYQLLVALHHPEGPEPAQDLVSAQHKASELETPASAQMLECK 300 >3C02-A nrPDB Length = 258 Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 5/116 (4%) Query: 8 KLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSV 67 K + R + EFL T + +F+ G+ F + D K+ L +GL++ Sbjct: 7 KSYVREFIGEFLGTFVLMFLGEGATANF-----HTTGLSGDWYKLCLGWGLAVFFGILVS 61 Query: 68 GHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNS 123 +SGAHLN AV++GL + + + +Y AQ +GA V T+ + G+ NS Sbjct: 62 AKLSGAHLNLAVSIGLSSINKFDLKKIPVYFFAQLLGAFVGTSTVYGLYHGFISNS 117 >6NB2-A nrPDB Length = 430 Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust. Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 137 QGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGHLLAID 185 QGL +E L +LC L T+ + LG +A LA L+ A L+++ Sbjct: 87 QGLSVEDQENLDRILCQLDNTENKSH-LGANAILATSLACARARALSLN 134 >5L77-A nrPDB Length = 495 Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust. Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 3/32 (9%) Query: 167 SAPLAIGLSV---ALGHLLAIDYTGCGINPAR 195 S+P+ +GLSV ALGH + DYTG A+ Sbjct: 37 SSPVRVGLSVDASALGHTIPPDYTGLSYEQAQ 68 >1XMX-A nrPDB Length = 385 Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust. Identities = 12/31 (38%), Positives = 17/31 (54%) Query: 23 LFVFISIGSALGFKYPVGNNQTAVQDNVKVS 53 +FV L + YP GNN T VQD + ++ Sbjct: 115 IFVVEPNSDCLCWLYPEGNNDTQVQDRITIA 145 >3ILX-A nrPDB Length = 143 Score = 27.7 bits (60), Expect = 5.8, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%) Query: 234 RSSDLTDRVKVWTSGQVEEYDLDADDINSRVEMKPK 269 + DL ++VK + QV+EYDL DI S + MK K Sbjct: 16 QKDDLANQVK-YLEEQVKEYDLVITDIGSGLNMKRK 50 >3S2F-A nrPDB Length = 340 Score = 26.9 bits (58), Expect = 8.7, Method: Compositional matrix adjust. Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Query: 164 LGGSAPLAIGLSVALG-HLLAIDYTGCGINPARSFGSAVITHNFSNHWIFWVGPFIGGAL 222 +GG +A+ + A+G + A+D +N AR G+ V + W+ IGGA Sbjct: 175 IGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAH 234 Query: 223 AVLI 226 VL+ Sbjct: 235 GVLV 238 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1IH5-A nrPDB 351 2e-97 1J4N-A nrPDB 342 1e-94 3IYZ-A nrPDB 308 1e-84 2ZZ9-A nrPDB 308 2e-84 4OJ2-X nrPDB 299 8e-82 1YMG-A nrPDB 295 1e-80 4NEF-A nrPDB 279 9e-76 3D9S-A nrPDB 268 3e-72 3GD8-A nrPDB 265 1e-71 3M9I-A nrPDB 250 4e-67 3CLL-A nrPDB 224 5e-59 6F7H-A nrPDB 205 1e-53 5I32-A nrPDB 199 9e-52 2W1P-A nrPDB 188 2e-48 2EVU-A nrPDB 185 2e-47 1LDI-A nrPDB 173 6e-44 3NE2-A nrPDB 172 1e-43 3LLQ-A nrPDB 171 2e-43 2O9F-A nrPDB 161 2e-40 3C02-A nrPDB 150 6e-37 Sequences not found previously or not previously below threshold: 4COF-A nrPDB 31 0.47 3CDI-A nrPDB 27 8.7 CONVERGED! >1IH5-A nrPDB Length = 269 Score = 351 bits (901), Expect = 2e-97, Method: Composition-based stats. Identities = 269/269 (100%), Positives = 269/269 (100%) Query: 1 MASEFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSI 60 MASEFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSI Sbjct: 1 MASEFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSI 60 Query: 61 ATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLT 120 ATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLT Sbjct: 61 ATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLT 120 Query: 121 GNSLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGH 180 GNSLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGH Sbjct: 121 GNSLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGH 180 Query: 181 LLAIDYTGCGINPARSFGSAVITHNFSNHWIFWVGPFIGGALAVLIYDFILAPRSSDLTD 240 LLAIDYTGCGINPARSFGSAVITHNFSNHWIFWVGPFIGGALAVLIYDFILAPRSSDLTD Sbjct: 181 LLAIDYTGCGINPARSFGSAVITHNFSNHWIFWVGPFIGGALAVLIYDFILAPRSSDLTD 240 Query: 241 RVKVWTSGQVEEYDLDADDINSRVEMKPK 269 RVKVWTSGQVEEYDLDADDINSRVEMKPK Sbjct: 241 RVKVWTSGQVEEYDLDADDINSRVEMKPK 269 >1J4N-A nrPDB Length = 271 Score = 342 bits (877), Expect = 1e-94, Method: Composition-based stats. Identities = 248/271 (91%), Positives = 255/271 (94%), Gaps = 2/271 (0%) Query: 1 MASEFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQT--AVQDNVKVSLAFGL 58 MASEFKKKLFWRAVVAEFLA LF+FISIGSALGF YP+ +NQT AVQDNVKVSLAFGL Sbjct: 1 MASEFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGL 60 Query: 59 SIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSS 118 SIATLAQSVGHISGAHLNPAVTLGLLLSCQIS+ RA+MYIIAQCVGAIVATAILSGITSS Sbjct: 61 SIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSS 120 Query: 119 LTGNSLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVAL 178 L NSLG N LA GVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGS PLAIG SVAL Sbjct: 121 LPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSGPLAIGFSVAL 180 Query: 179 GHLLAIDYTGCGINPARSFGSAVITHNFSNHWIFWVGPFIGGALAVLIYDFILAPRSSDL 238 GHLLAIDYTGCGINPARSFGS+VITHNF +HWIFWVGPFIG ALAVLIYDFILAPRSSDL Sbjct: 181 GHLLAIDYTGCGINPARSFGSSVITHNFQDHWIFWVGPFIGAALAVLIYDFILAPRSSDL 240 Query: 239 TDRVKVWTSGQVEEYDLDADDINSRVEMKPK 269 TDRVKVWTSGQVEEYDLDADDINSRVEMKPK Sbjct: 241 TDRVKVWTSGQVEEYDLDADDINSRVEMKPK 271 >3IYZ-A nrPDB Length = 340 Score = 308 bits (789), Expect = 1e-84, Method: Composition-based stats. Identities = 117/263 (44%), Positives = 166/263 (63%), Gaps = 7/263 (2%) Query: 8 KLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSV 67 + FW+AV AEFLA +FV +S+GS + + G+ D V +SL FGLSIAT+ Q Sbjct: 49 QAFWKAVTAEFLAMLIFVLLSVGSTINWG---GSENPLPVDMVLISLCFGLSIATMVQCF 105 Query: 68 GHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNSLGRN 127 GHISG H+NPAVT+ ++ + +ISI +++ YI AQC+GAI+ IL +T LG Sbjct: 106 GHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVT 165 Query: 128 DLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGHLLAIDYT 187 + + +G GL +E+I T QLV + A+ D +R D+ GS LAIG SVA+GHL AI+YT Sbjct: 166 TVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTGSVALAIGFSVAIGHLFAINYT 225 Query: 188 GCGINPARSFGSAVITHNFSNHWIFWVGPFIGGALAVLIYDFILAPRSSDLTDRVKVWTS 247 G +NPARSFG AVI N+ NHWI+WVGP IG LA +Y+++ P +L R+K S Sbjct: 226 GASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCP-DVELKRRLKEAFS 284 Query: 248 GQVEEYD---LDADDINSRVEMK 267 ++ ++ +D S+VE + Sbjct: 285 KAAQQTKGSYMEVEDNRSQVETE 307 >2ZZ9-A nrPDB Length = 301 Score = 308 bits (789), Expect = 2e-84, Method: Composition-based stats. Identities = 117/263 (44%), Positives = 166/263 (63%), Gaps = 7/263 (2%) Query: 8 KLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSV 67 + FW+AV AEFLA +FV +S+GS + + G+ D V +SL FGLSIAT+ Q Sbjct: 10 QAFWKAVTAEFLAMLIFVLLSVGSTINWG---GSENPLPVDMVLISLCFGLSIATMVQCF 66 Query: 68 GHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNSLGRN 127 GHISG H+NPAVT+ ++ + +ISI +++ YI AQC+GAI+ IL +T LG Sbjct: 67 GHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVT 126 Query: 128 DLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGHLLAIDYT 187 + + +G GL +E+I T QLV + A+ D +R D+ GS LAIG SVA+GHL AI+YT Sbjct: 127 TVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTGSVALAIGFSVAIGHLFAINYT 186 Query: 188 GCGINPARSFGSAVITHNFSNHWIFWVGPFIGGALAVLIYDFILAPRSSDLTDRVKVWTS 247 G +NPARSFG AVI N+ NHWI+WVGP IG LA +Y+++ P +L R+K S Sbjct: 187 GASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCP-DVELKRRLKEAFS 245 Query: 248 GQVEEYD---LDADDINSRVEMK 267 ++ ++ +D S+VE + Sbjct: 246 KAAQQTKGSYMEVEDNRSQVETE 268 >4OJ2-X nrPDB Length = 274 Score = 299 bits (766), Expect = 8e-82, Method: Composition-based stats. Identities = 116/260 (44%), Positives = 166/260 (63%), Gaps = 8/260 (3%) Query: 4 EFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATL 63 E + F RAV AEFLAT LFVF +GSAL + A+ +++++AFGL I TL Sbjct: 6 ELRSIAFSRAVFAEFLATLLFVFFGLGSALNW-------PQALPSVLQIAMAFGLGIGTL 58 Query: 64 AQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNS 123 Q++GHISGAH+NPAVT+ L+ C +S+ RA Y+ AQ +GA+ A+L IT + Sbjct: 59 VQALGHISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGD 118 Query: 124 LGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGHLLA 183 L N L++ +GQ + +E+ TLQLVLC+ A+TD RR + G+ L+IG SVALGHLL Sbjct: 119 LAVNALSNSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLG 178 Query: 184 IDYTGCGINPARSFGSAVITHNFSNHWIFWVGPFIGGALAVLIYDFILAPRSSDLTDRVK 243 I YTGC +NPARS AV+T F +HW+FW+GP +G L L+Y+++L P + L++R+ Sbjct: 179 IHYTGCSMNPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNYVLFPPAKSLSERLA 238 Query: 244 VWTSGQVEEYDLDADDINSR 263 V G + D + ++ R Sbjct: 239 VLK-GLEPDTDWEEREVRRR 257 >1YMG-A nrPDB Length = 263 Score = 295 bits (755), Expect = 1e-80, Method: Composition-based stats. Identities = 115/266 (43%), Positives = 165/266 (62%), Gaps = 7/266 (2%) Query: 4 EFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATL 63 E + FWRA+ AEF A+ +VF +G++L + ++V+LAFGL++ATL Sbjct: 3 ELRSASFWRAICAEFFASLFYVFFGLGASLRW-------APGPLHVLQVALAFGLALATL 55 Query: 64 AQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNS 123 Q+VGHISGAH+NPAVT L+ Q+S+ RA+ Y++AQ +GA+ A+L +T + Sbjct: 56 VQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGN 115 Query: 124 LGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGHLLA 183 L N L GV+ GQ +EI TLQ VLC+ AT D RR GS LA+G S+ LGHL Sbjct: 116 LALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFG 175 Query: 184 IDYTGCGINPARSFGSAVITHNFSNHWIFWVGPFIGGALAVLIYDFILAPRSSDLTDRVK 243 + YTG G+NPARSF A++T NF+NHW++WVGP IG L L+YDF+L PR +++R+ Sbjct: 176 MYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPRLKSVSERLS 235 Query: 244 VWTSGQVEEYDLDADDINSRVEMKPK 269 + + E + + VE+K + Sbjct: 236 ILKGSRPSESNGQPEVTGEPVELKTQ 261 >4NEF-A nrPDB Length = 242 Score = 279 bits (713), Expect = 9e-76, Method: Composition-based stats. Identities = 114/249 (45%), Positives = 161/249 (64%), Gaps = 7/249 (2%) Query: 2 ASEFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIA 61 SE + F RAV AEFLAT LFVF +GSAL + A+ +++++AFGL I Sbjct: 1 GSELRSIAFSRAVFAEFLATLLFVFFGLGSALNW-------PQALPSVLQIAMAFGLGIG 53 Query: 62 TLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTG 121 TL Q++GHISGAH+NPAVT+ L+ C +S+ RA Y+ AQ +GA+ A+L IT + Sbjct: 54 TLVQALGHISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIR 113 Query: 122 NSLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGHL 181 L N L++ +GQ + +E+ TLQLVLC+ A+TD RR + G+ L+IG SVALGHL Sbjct: 114 GDLAVNALSNSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHL 173 Query: 182 LAIDYTGCGINPARSFGSAVITHNFSNHWIFWVGPFIGGALAVLIYDFILAPRSSDLTDR 241 L I YTGC +NPARS AV+T F +HW+FW+GP +G L L+Y+++L P + L++R Sbjct: 174 LGIHYTGCSMNPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNYVLFPPAKSLSER 233 Query: 242 VKVWTSGQV 250 + V + Sbjct: 234 LAVLKGLEP 242 >3D9S-A nrPDB Length = 266 Score = 268 bits (684), Expect = 3e-72, Method: Composition-based stats. Identities = 121/265 (45%), Positives = 164/265 (61%), Gaps = 12/265 (4%) Query: 4 EFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATL 63 E F +AV AEFLAT +FVF +GSAL + +A+ ++++LAFGL+I TL Sbjct: 5 EVCSVAFLKAVFAEFLATLIFVFFGLGSALKW-------PSALPTILQIALAFGLAIGTL 57 Query: 64 AQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNS 123 AQ++G +SG H+NPA+TL LL+ QIS+ RA Y+ AQ VGAI IL G+ + Sbjct: 58 AQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGN 117 Query: 124 LGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGHLLA 183 L N L + GQ + +E+I T QL LC+ A+TD RR GS L+IGLSV LGHL+ Sbjct: 118 LAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVG 177 Query: 184 IDYTGCGINPARSFGSAVITHNFSN-HWIFWVGPFIGGALAVLIYDFILAPRSSDLTDRV 242 I +TGC +NPARSFG AV+ + FS HW+FWVGP +G LA ++Y ++L P S L++RV Sbjct: 178 IYFTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLSLSERV 237 Query: 243 KVWTSGQVEEYDLDADDINSRVEMK 267 + Y+ D D R E K Sbjct: 238 AIIKG----TYEPDEDWEEQREERK 258 >3GD8-A nrPDB Length = 223 Score = 265 bits (677), Expect = 1e-71, Method: Composition-based stats. Identities = 109/226 (48%), Positives = 149/226 (65%), Gaps = 3/226 (1%) Query: 8 KLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSV 67 + FW+AV AEFLA +FV +S+GS + + G + D V +SL FGLSIAT+ Q Sbjct: 1 QAFWKAVTAEFLAMLIFVLLSLGSTINWG---GTEKPLPVDMVLISLCFGLSIATMVQCF 57 Query: 68 GHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNSLGRN 127 GHISG H+NPAVT+ ++ + +ISI +++ YI AQC+GAI+ IL +T LG Sbjct: 58 GHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVT 117 Query: 128 DLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGHLLAIDYT 187 + + +G GL +E+I T QLV + A+ D +R D+ GS LAIG SVA+GHL AI+YT Sbjct: 118 MVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIALAIGFSVAIGHLFAINYT 177 Query: 188 GCGINPARSFGSAVITHNFSNHWIFWVGPFIGGALAVLIYDFILAP 233 G +NPARSFG AVI N+ NHWI+WVGP IG LA +Y+++ P Sbjct: 178 GASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYVFCP 223 >3M9I-A nrPDB Length = 220 Score = 250 bits (639), Expect = 4e-67, Method: Composition-based stats. Identities = 110/227 (48%), Positives = 148/227 (65%), Gaps = 7/227 (3%) Query: 8 KLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSV 67 FWRA+ AEF AT +VF +G++L + ++V+LAFGL++ATL Q+V Sbjct: 1 ASFWRAIFAEFFATLFYVFFGLGASLRW-------APGPLHVLQVALAFGLALATLVQAV 53 Query: 68 GHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNSLGRN 127 GHISGAH+NPAVT L+ Q+S+ RA+ Y++AQ +GA+ A+L +T +L N Sbjct: 54 GHISGAHVNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALN 113 Query: 128 DLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGHLLAIDYT 187 L GV+ GQ +EI TLQ VLC+ AT D RR GS LA+G S+ LGHL + YT Sbjct: 114 TLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYT 173 Query: 188 GCGINPARSFGSAVITHNFSNHWIFWVGPFIGGALAVLIYDFILAPR 234 G G+NPARSF A++T NF+NHW++WVGP IG L L+YDF+L PR Sbjct: 174 GAGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPR 220 >3CLL-A nrPDB Length = 300 Score = 224 bits (570), Expect = 5e-59, Method: Composition-based stats. Identities = 98/236 (41%), Positives = 134/236 (56%), Gaps = 10/236 (4%) Query: 4 EFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATL 63 E K FWRA +AEF+AT LF++I++ + +G + ++ AFG I L Sbjct: 50 ELKLWSFWRAAIAEFIATLLFLYITVATVIGHSKETV--VCGSVGLLGIAWAFGGMIFVL 107 Query: 64 AQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSG-ITSSLTGN 122 ISG H+NPAVT GL L+ ++ + RAL+Y+IAQC+GAI ++ + Sbjct: 108 VYCTAGISGGHINPAVTFGLFLARKVELLRALVYMIAQCLGAICGVGLVKAFMKGPYNQF 167 Query: 123 SLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDL----GGSAPLAIGLSVAL 178 G N +A G N G LG EIIGT LV V + TD +R APL IG +V + Sbjct: 168 GGGANSVALGYNKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPILAPLPIGFAVFM 227 Query: 179 GHLLAIDYTGCGINPARSFGSAVITHN---FSNHWIFWVGPFIGGALAVLIYDFIL 231 HL I TG GINPARSFG+AVI ++ + + WIFWVGPFIG A+A + ++L Sbjct: 228 VHLATIPITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVL 283 >6F7H-A nrPDB Length = 301 Score = 205 bits (522), Expect = 1e-53, Method: Composition-based stats. Identities = 63/288 (21%), Positives = 117/288 (40%), Gaps = 31/288 (10%) Query: 7 KKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQS 66 + L R +AEFL + + ++ G+ V + +T + + LA L++ Sbjct: 17 RSLLARQCLAEFLGVFVLMLLTQGAVA---QAVTSGETK-GNFFTMFLAGSLAVTIAIYV 72 Query: 67 VGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNSLGR 126 G++SGAHLNPA +L + + ++ + +YI+ Q + A A+ + N G Sbjct: 73 GGNVSGAHLNPAFSLAMCIVGRLPWVKLPIYILVQLLSAFCASGATYVLYHDALQNYTGG 132 Query: 127 NDLADGVNS---------------GQGLGIEIIGTLQLVLCVLATTDRRRRDLG-GSAPL 170 N G G +++GT L++ +LA DRR + + G P+ Sbjct: 133 NLTVTGPKETASIFATYPAPYLSLNNGFLDQVLGTGMLIVGLLAILDRRNKGVPAGLEPV 192 Query: 171 AIGLSVALGHLLAIDYTGCGINPARSFGSAVITH---------NFSNHWIF--WVGPFIG 219 +G+ + L G +NPAR G + T+ + N W + V P +G Sbjct: 193 VVGMLILALGLSMGANCGIPLNPARDLGPRLFTYVAGWGPEVFSAGNGWWWVPVVAPLVG 252 Query: 220 GALAVLIYDFILAPRSSDLTDRVKVWTSGQVEEYDLDADDINSRVEMK 267 + Y ++A + + + S Q + +L+ +E K Sbjct: 253 ATVGTATYQLLVALHHPEGPEPAQDLVSAQHKASELETPASAQMLECK 300 >5I32-A nrPDB Length = 275 Score = 199 bits (507), Expect = 9e-52, Method: Composition-based stats. Identities = 90/229 (39%), Positives = 129/229 (56%), Gaps = 4/229 (1%) Query: 12 RAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGHIS 71 RA +AEF++T LFVF +GSA+ + + V +++ G ++ +IS Sbjct: 44 RAYLAEFISTLLFVFAGVGSAIAYAKLTSDAALDTPGLVAIAVCHGFALFVAVAIGANIS 103 Query: 72 GAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNSLGRNDLAD 131 G H+NPAVT GL + QI++ + Y IAQ +G+ A +L +T L + + +A Sbjct: 104 GGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLKYVTGGLA---VPTHSVAA 160 Query: 132 GVNSGQGLGIEIIGTLQLVLCVLAT-TDRRRRDLGGSAPLAIGLSVALGHLLAIDYTGCG 190 G+ S +G+ +EII T LV V AT D ++ LG APLAIGL V L A ++G Sbjct: 161 GLGSIEGVVMEIIITFALVYTVYATAADPKKGSLGTIAPLAIGLIVGANILAAGPFSGGS 220 Query: 191 INPARSFGSAVITHNFSNHWIFWVGPFIGGALAVLIYDFILAPRSSDLT 239 +NPARSFG AV +FS HW++WVGP IGG LA LIY + S + Sbjct: 221 MNPARSFGPAVAAGDFSGHWVYWVGPLIGGGLAGLIYGNVFMGSSEHVP 269 Score = 39.3 bits (90), Expect = 0.002, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 48/126 (38%), Gaps = 10/126 (7%) Query: 115 ITSSLTGNSLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLAT-------TDRRRRDLGGS 167 + G + G D + + S + E I TL V + + T D G Sbjct: 22 LYFQGAGVAFGSFDDSFSLASLRAYLAEFISTLLFVFAGVGSAIAYAKLTSDAALDTPGL 81 Query: 168 APLAI--GLSVALGHLLAIDYTGCGINPARSFGSAVI-THNFSNHWIFWVGPFIGGALAV 224 +A+ G ++ + + + +G +NPA +FG AV +W+ +G A Sbjct: 82 VAIAVCHGFALFVAVAIGANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAAC 141 Query: 225 LIYDFI 230 + ++ Sbjct: 142 FLLKYV 147 >2W1P-A nrPDB Length = 279 Score = 188 bits (477), Expect = 2e-48, Method: Composition-based stats. Identities = 74/219 (33%), Positives = 105/219 (47%), Gaps = 7/219 (3%) Query: 13 AVVAEFLATTLFVFISIGSALGFKYPVGNNQTA--VQDNVKVSLAFGLSIATLAQSVGHI 70 A+ EF+ T LF++ + A + +S FG + + Sbjct: 47 AMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRV 106 Query: 71 SGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNSLGRNDLA 130 SG +LNPAVTL L+L+ I FR ++ Q V + A S +T N L Sbjct: 107 SGGNLNPAVTLALVLARAIPPFRGILMAFTQIVAGMAAAGAASAMTPGEI---AFANALG 163 Query: 131 DGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGHLLAIDYTGCG 190 G + +GL +E GT L L VL + R AP IG+++ + HL+ I YTG G Sbjct: 164 GGASRTRGLFLEAFGTAILCLTVLMLAVEKHRATW-FAPFVIGIALLIAHLICIYYTGAG 222 Query: 191 INPARSFGSAVITHNFSN-HWIFWVGPFIGGALAVLIYD 228 +NPARSFG AV +F N HWI+W+GP +G LA I+ Sbjct: 223 LNPARSFGPAVAARSFPNYHWIYWLGPILGAFLAYSIWQ 261 >2EVU-A nrPDB Length = 246 Score = 185 bits (469), Expect = 2e-47, Method: Composition-based stats. Identities = 74/242 (30%), Positives = 113/242 (46%), Gaps = 21/242 (8%) Query: 9 LFWRAVVAEFLATTLFVFISIGSAL-------GFKYPVGNNQTAVQ-----DNVKVSLAF 56 + +AEF+ T + VF GSA G P N D V + LAF Sbjct: 3 SLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAF 62 Query: 57 GLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGIT 116 G +IA ++G+ISG H+NPAVT+GL + + YIIAQ +GA + I Sbjct: 63 GFAIAASIYALGNISGCHINPAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCA 122 Query: 117 --SSLTGNSLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGL 174 + T LG G++ Q + E++GT L++ ++ R G A + IGL Sbjct: 123 GIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIMGIAVDERAPK-GFAGIIIGL 181 Query: 175 SVALGHLLAIDYTGCGINPARSFGSAVITHNFS--NHW----IFWVGPFIGGALAVLIYD 228 +VA + +G +NPAR+FG + F+ + W I+ +GP +G LA L Y Sbjct: 182 TVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTYQ 241 Query: 229 FI 230 ++ Sbjct: 242 YL 243 Score = 53.9 bits (128), Expect = 8e-08, Method: Composition-based stats. Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 15/120 (12%) Query: 3 SEFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIAT 62 + F +W+A++AE + T L + +G A+ + P G + GL++A Sbjct: 136 APFPGISYWQAMLAEVVGTFLLMITIMGIAVDERAPKGFA----------GIIIGLTVAG 185 Query: 63 LAQSVGHISGAHLNPAVTLG-----LLLSCQISIFRALMYIIAQCVGAIVATAILSGITS 117 + ++G+ISG+ LNPA T G ++ + +Y+I VGA++A +TS Sbjct: 186 IITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTYQYLTS 245 >1LDI-A nrPDB Length = 281 Score = 173 bits (439), Expect = 6e-44, Method: Composition-based stats. Identities = 69/256 (26%), Positives = 104/256 (40%), Gaps = 37/256 (14%) Query: 13 AVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGHISG 72 +AEFL T L +F +G K A ++S+ +GL +A +SG Sbjct: 10 QCIAEFLGTGLLIFFGVGCVAALKVA-----GASFGQWEISVIWGLGVAMAIYLTAGVSG 64 Query: 73 AHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGI----------TSSLTGN 122 AHLNPAVT+ L L + + +I++Q GA A A++ G+ T + Sbjct: 65 AHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRG 124 Query: 123 SLGRNDLA--------DGVNSGQGLGIEIIGTLQLVLCVLATTDRRRR-DLGGSAPLAIG 173 S+ DLA +N Q +E++ T L+ +LA TD G APL IG Sbjct: 125 SVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRGPLAPLLIG 184 Query: 174 LSVALGHLLAIDYTGCGINPARSFGSAVIT--HNFSN-----------HWIFWVGPFIGG 220 L +A+ TG +NPAR FG V + N + GP +G Sbjct: 185 LLIAVIGASMGPLTGFAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLFGPIVGA 244 Query: 221 ALAVLIYDFILAPRSS 236 + Y ++ Sbjct: 245 IVGAFAYRKLIGRHLP 260 >3NE2-A nrPDB Length = 246 Score = 172 bits (436), Expect = 1e-43, Method: Composition-based stats. Identities = 67/241 (27%), Positives = 108/241 (44%), Gaps = 20/241 (8%) Query: 9 LFWRAVVAEFLATTLFVFISIGSAL------------GFKYPVGNNQTAVQDNVKVSLAF 56 + AE + T + VF G+A+ + D + +AF Sbjct: 4 TLAKRFTAEVVGTFILVFFGPGAAVITLMIANGADKPNEFNIGIGALGGLGDWFAIGMAF 63 Query: 57 GLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGIT 116 L+IA + S+G ISGAH+NPAVT+ L + + YI+AQ +GA + + + Sbjct: 64 ALAIAAVIYSLGRISGAHINPAVTIALWSIGRFPGREVVPYIVAQFIGAALGSLLFLACV 123 Query: 117 SS--LTGNSLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGL 174 T LG G+ GQ + E IGT L+L ++ R G A L IGL Sbjct: 124 GPAAATVGGLGATAPFPGIGYGQAILTEAIGTFLLMLVIMGVAVDERAP-PGFAGLVIGL 182 Query: 175 SVALGHLLAIDYTGCGINPARSFGS----AVITHNFSNHW-IFWVGPFIGGALAVLIYDF 229 +V + TG +NPAR+FG +++ N ++ I+ +GP +G A +Y++ Sbjct: 183 TVGGIITTIGNITGSSLNPARTFGPYLGDSLMGINLWQYFPIYVIGPIVGAVAAAWLYNY 242 Query: 230 I 230 + Sbjct: 243 L 243 Score = 48.5 bits (114), Expect = 3e-06, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 14/118 (11%) Query: 3 SEFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIAT 62 + F + +A++ E + T L + + +G A+ + P G L GL++ Sbjct: 137 APFPGIGYGQAILTEAIGTFLLMLVIMGVAVDERAPPGFA----------GLVIGLTVGG 186 Query: 63 LAQSVGHISGAHLNPAVTLGLLLSCQISIFRA----LMYIIAQCVGAIVATAILSGIT 116 + ++G+I+G+ LNPA T G L + +Y+I VGA+ A + + + Sbjct: 187 IITTIGNITGSSLNPARTFGPYLGDSLMGINLWQYFPIYVIGPIVGAVAAAWLYNYLA 244 >3LLQ-A nrPDB Length = 256 Score = 171 bits (434), Expect = 2e-43, Method: Composition-based stats. Identities = 83/234 (35%), Positives = 123/234 (52%), Gaps = 15/234 (6%) Query: 5 FKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLA 64 F+ + R ++AEF T VF GSA+ + + + V+LAFGL++ T+A Sbjct: 24 FQSYVMGRKLLAEFFGTFWLVFGGCGSAV---FAAAFPELGI-GFTGVALAFGLTVLTMA 79 Query: 65 QSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNSL 124 +VG ISG H NPAV++GL ++ + + Y+IAQ GAIVA A L I + G L Sbjct: 80 YAVGGISGGHFNPAVSVGLTVAGRFPASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDL 139 Query: 125 GRND-------LADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVA 177 G G + L IEII T ++ +L +T R G AP+AIGL++ Sbjct: 140 GGFASNGYGEHSPGGYSLVSALLIEIILTAFFLIVILGSTHGRVPA--GFAPIAIGLALT 197 Query: 178 LGHLLAIDYTGCGINPARSFGSAVITHNFS--NHWIFWVGPFIGGALAVLIYDF 229 L HL++I T +NPARS G A+ ++ W+FW+ P +GGA +I+ Sbjct: 198 LIHLISIPVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPIVGGAAGAVIWKL 251 Score = 30.8 bits (68), Expect = 0.61, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 25/83 (30%), Gaps = 5/83 (6%) Query: 127 NDLADGVNSGQGLGIEIIGTLQLVLC-----VLATTDRRRRDLGGSAPLAIGLSVALGHL 181 N G+ L E GT LV V A LA GL+V Sbjct: 21 NLYFQSYVMGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAY 80 Query: 182 LAIDYTGCGINPARSFGSAVITH 204 +G NPA S G V Sbjct: 81 AVGGISGGHFNPAVSVGLTVAGR 103 >2O9F-A nrPDB Length = 234 Score = 161 bits (408), Expect = 2e-40, Method: Composition-based stats. Identities = 84/237 (35%), Positives = 119/237 (50%), Gaps = 17/237 (7%) Query: 10 FWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGH 69 +R + AE T VF GSA+ G + + V+LAFGL++ T+A +VGH Sbjct: 4 MFRKLAAESFGTFWLVFGGSGSAV---LAAGFPELGI-GFAGVALAFGLTVLTMAFAVGH 59 Query: 70 ISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNSLGRNDL 129 ISG H NPAVT+GL + + Y+IAQ VG IVA A+L I S TG + Sbjct: 60 ISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGF 119 Query: 130 A---------DGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGH 180 A G + L +E++ + +L + TD+ G AP+AIGL+ L H Sbjct: 120 ASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPA--GFAPIAIGLACTLIH 177 Query: 181 LLAIDYTGCGINPARSFGSAVITHNFS--NHWIFWVGPFIGGALAVLIYDFILAPRS 235 L++I T +NPARS A+ ++ W FWV P +GG + LIY +L R Sbjct: 178 LISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEKRD 234 >3C02-A nrPDB Length = 258 Score = 150 bits (379), Expect = 6e-37, Method: Composition-based stats. Identities = 59/243 (24%), Positives = 100/243 (41%), Gaps = 22/243 (9%) Query: 8 KLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSV 67 K + R + EFL T + +F+ G+ F + D K+ L +GL++ Sbjct: 7 KSYVREFIGEFLGTFVLMFLGEGATANF-----HTTGLSGDWYKLCLGWGLAVFFGILVS 61 Query: 68 GHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNS---- 123 +SGAHLN AV++GL + + + +Y AQ +GA V T+ + G+ NS Sbjct: 62 AKLSGAHLNLAVSIGLSSINKFDLKKIPVYFFAQLLGAFVGTSTVYGLYHGFISNSKIPQ 121 Query: 124 -LGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPL--AIGLSVALGH 180 ++ E+I T L+L +L D L +GL + Sbjct: 122 FAWETSRNPSISLTGAFFNELILTGILLLVILVVVDENICGKFHILKLSSVVGLIILCIG 181 Query: 181 LLAIDYTGCGINPARSFGSAVITHNF-------SNHWIFW---VGPFIGGALAVLIYDFI 230 + TG +NP+R GS ++ +++ FW V P +G + YD + Sbjct: 182 ITFGGNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQFYDKV 241 Query: 231 LAP 233 + P Sbjct: 242 ICP 244 >4COF-A nrPDB Length = 355 Score = 31.2 bits (69), Expect = 0.47, Method: Composition-based stats. Identities = 11/72 (15%), Positives = 28/72 (38%), Gaps = 3/72 (4%) Query: 5 FKKKLFWRAVVAEFLATTLFVFISI---GSALGFKYPVGNNQTAVQDNVKVSLAFGLSIA 61 K + +A+ + +FVF+++ + A+ ++ F S+ Sbjct: 275 LPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFSQPARAAAIDRWSRIVFPFTFSLF 334 Query: 62 TLAQSVGHISGA 73 L + +++GA Sbjct: 335 NLVYWLYYVNGA 346 >3CDI-A nrPDB Length = 723 Score = 26.9 bits (58), Expect = 8.7, Method: Composition-based stats. Identities = 7/50 (14%), Positives = 15/50 (30%) Query: 215 GPFIGGALAVLIYDFILAPRSSDLTDRVKVWTSGQVEEYDLDADDINSRV 264 GP + + ++L P +L + E L + + Sbjct: 153 GPIGAARVGYINDQYVLNPTQDELKESKLDLVVAGTEAAVLMVESEAQLL 202 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.312 0.135 0.351 Lambda K H 0.267 0.0415 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,923,986 Number of Sequences: 36641 Number of extensions: 318515 Number of successful extensions: 981 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 44 Number of HSP's successfully gapped in prelim test: 28 Number of HSP's that attempted gapping in prelim test: 805 Number of HSP's gapped (non-prelim): 85 length of query: 269 length of database: 10,336,785 effective HSP length: 95 effective length of query: 174 effective length of database: 6,855,890 effective search space: 1192924860 effective search space used: 1192924860 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 58 (26.9 bits)