BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P29469 (868 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3JC7-2 nrPDB 1783 0.0 4FDG-B nrPDB 364 e-100 3F9V-A nrPDB 363 e-100 4R7Y-A nrPDB 357 9e-99 5XF8-3 nrPDB 319 3e-87 3JC6-4 nrPDB 319 4e-87 5BK4-5 nrPDB 309 3e-84 5U8S-7 nrPDB 302 4e-82 4R7Z-A nrPDB 224 1e-58 3F8T-A nrPDB 82 1e-15 3D8B-A nrPDB 36 0.065 4ZPX-A nrPDB 35 0.11 3K1J-A nrPDB 35 0.17 1OFI-A nrPDB 33 0.45 3V44-A nrPDB 33 0.62 3DZD-A nrPDB 32 1.0 5WZK-A nrPDB 32 1.6 5WZJ-A nrPDB 31 1.9 3CRV-A nrPDB 31 2.0 2R65-A nrPDB 31 3.0 5EXS-A nrPDB 30 4.8 6AS7-A nrPDB 30 5.0 4L16-A nrPDB 30 6.6 5EXX-A nrPDB 29 7.0 >3JC7-2 nrPDB Length = 868 Score = 1783 bits (4618), Expect = 0.0, Method: Compositional matrix adjust. Identities = 868/868 (100%), Positives = 868/868 (100%) Query: 1 MSDNRRRRREEDDSDSENELPPSSPQQHFRGGMNPVSSPIGSPDMINPEGDDNEVDDVPD 60 MSDNRRRRREEDDSDSENELPPSSPQQHFRGGMNPVSSPIGSPDMINPEGDDNEVDDVPD Sbjct: 1 MSDNRRRRREEDDSDSENELPPSSPQQHFRGGMNPVSSPIGSPDMINPEGDDNEVDDVPD 60 Query: 61 IDEVEEQMNEVDLMDDNMYEDYAADHNRDRYDPDQVDDREQQELSLSERRRIDAQLNERD 120 IDEVEEQMNEVDLMDDNMYEDYAADHNRDRYDPDQVDDREQQELSLSERRRIDAQLNERD Sbjct: 61 IDEVEEQMNEVDLMDDNMYEDYAADHNRDRYDPDQVDDREQQELSLSERRRIDAQLNERD 120 Query: 121 RLLRNVAYIDDEDEEQEGAAQLDEMGLPVQRRRRRRQYEDLENSDDDLLSDMDIDPLREE 180 RLLRNVAYIDDEDEEQEGAAQLDEMGLPVQRRRRRRQYEDLENSDDDLLSDMDIDPLREE Sbjct: 121 RLLRNVAYIDDEDEEQEGAAQLDEMGLPVQRRRRRRQYEDLENSDDDLLSDMDIDPLREE 180 Query: 181 LTLESLSNVKANSYSEWITQPNVSRTIARELKSFLLEYTDETGRSVYGARIRTLGEMNSE 240 LTLESLSNVKANSYSEWITQPNVSRTIARELKSFLLEYTDETGRSVYGARIRTLGEMNSE Sbjct: 181 LTLESLSNVKANSYSEWITQPNVSRTIARELKSFLLEYTDETGRSVYGARIRTLGEMNSE 240 Query: 241 SLEVNYRHLAESKAILALFLAKCPEEMLKIFDLVAMEATELHYPDYARIHSEIHVRISDF 300 SLEVNYRHLAESKAILALFLAKCPEEMLKIFDLVAMEATELHYPDYARIHSEIHVRISDF Sbjct: 241 SLEVNYRHLAESKAILALFLAKCPEEMLKIFDLVAMEATELHYPDYARIHSEIHVRISDF 300 Query: 301 PTIYSLRELRESNLSSLVRVTGVVTRRTGVFPQLKYVKFNCLKCGSILGPFFQDSNEEIR 360 PTIYSLRELRESNLSSLVRVTGVVTRRTGVFPQLKYVKFNCLKCGSILGPFFQDSNEEIR Sbjct: 301 PTIYSLRELRESNLSSLVRVTGVVTRRTGVFPQLKYVKFNCLKCGSILGPFFQDSNEEIR 360 Query: 361 ISFCTNCKSKGPFRVNGEKTVYRNYQRVTLQEAPGTVPPGRLPRHREVILLADLVDVSKP 420 ISFCTNCKSKGPFRVNGEKTVYRNYQRVTLQEAPGTVPPGRLPRHREVILLADLVDVSKP Sbjct: 361 ISFCTNCKSKGPFRVNGEKTVYRNYQRVTLQEAPGTVPPGRLPRHREVILLADLVDVSKP 420 Query: 421 GEEVEVTGIYKNNYDGNLNAKNGFPVFATIIEANSIKRREGNTANEGEEGLDVFSWTEEE 480 GEEVEVTGIYKNNYDGNLNAKNGFPVFATIIEANSIKRREGNTANEGEEGLDVFSWTEEE Sbjct: 421 GEEVEVTGIYKNNYDGNLNAKNGFPVFATIIEANSIKRREGNTANEGEEGLDVFSWTEEE 480 Query: 481 EREFRKISRDRGIIDKIISSMAPSIYGHRDIKTAVACSLFGGVPKNVNGKHSIRGDINVL 540 EREFRKISRDRGIIDKIISSMAPSIYGHRDIKTAVACSLFGGVPKNVNGKHSIRGDINVL Sbjct: 481 EREFRKISRDRGIIDKIISSMAPSIYGHRDIKTAVACSLFGGVPKNVNGKHSIRGDINVL 540 Query: 541 LLGDPGTAKSQILKYVEKTAHRAVFATGQGASAVGLTASVRKDPITKEWTLEGGALVLAD 600 LLGDPGTAKSQILKYVEKTAHRAVFATGQGASAVGLTASVRKDPITKEWTLEGGALVLAD Sbjct: 541 LLGDPGTAKSQILKYVEKTAHRAVFATGQGASAVGLTASVRKDPITKEWTLEGGALVLAD 600 Query: 601 KGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLQARCSIIAAANPNGGRYNST 660 KGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLQARCSIIAAANPNGGRYNST Sbjct: 601 KGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLQARCSIIAAANPNGGRYNST 660 Query: 661 LPLAQNVSLTEPILSRFDILCVVRDLVDEEADERLATFVVDSHVRSHPENDEDREGEELK 720 LPLAQNVSLTEPILSRFDILCVVRDLVDEEADERLATFVVDSHVRSHPENDEDREGEELK Sbjct: 661 LPLAQNVSLTEPILSRFDILCVVRDLVDEEADERLATFVVDSHVRSHPENDEDREGEELK 720 Query: 721 NNGESAIEQGEDEINEQLNARQRRLQRQRKKEEEISPIPQELLMKYIHYARTKIYPKLHQ 780 NNGESAIEQGEDEINEQLNARQRRLQRQRKKEEEISPIPQELLMKYIHYARTKIYPKLHQ Sbjct: 721 NNGESAIEQGEDEINEQLNARQRRLQRQRKKEEEISPIPQELLMKYIHYARTKIYPKLHQ 780 Query: 781 MDMDKVSRVYADLRRESISTGSFPITVRHLESILRIAESFAKMRLSEFVSSYDLDRAIKV 840 MDMDKVSRVYADLRRESISTGSFPITVRHLESILRIAESFAKMRLSEFVSSYDLDRAIKV Sbjct: 781 MDMDKVSRVYADLRRESISTGSFPITVRHLESILRIAESFAKMRLSEFVSSYDLDRAIKV 840 Query: 841 VVDSFVDAQKVSVRRQLRRSFAIYTLGH 868 VVDSFVDAQKVSVRRQLRRSFAIYTLGH Sbjct: 841 VVDSFVDAQKVSVRRQLRRSFAIYTLGH 868 >4FDG-B nrPDB Length = 692 Score = 364 bits (934), Expect = e-100, Method: Compositional matrix adjust. Identities = 224/636 (35%), Positives = 356/636 (55%), Gaps = 67/636 (10%) Query: 214 FLLEYTDETGRSVYGARIRTLGEMNSESLEVNYRHLAESKAILALFLAKCPEEMLKIFDL 273 FL + ++ Y RI L +SL + + + LA + + +L I + Sbjct: 23 FLTTFKGNNNQNKYIERINELVAYRKKSLIIEFSDVLSFNENLAYEIINNTKIILPILEG 82 Query: 274 VAMEATELHYPDYARIHSEIHVRISDFPTIYSLRELRESNLSSLVRVTGVVTRRTGVFPQ 333 + P Y R ++HVRI P + LR++R +++ L+ + G++ + T V + Sbjct: 83 ALYDHILQLDPTYQRDIEKVHVRIVGIPRVIELRKIRSTDIGKLITIDGILVKVTPVKER 142 Query: 334 L-----KYVKFNCLKCGSILGPFFQDSNEEIRI-SFCTNCKSKGPFRVNGEKTVYRNYQR 387 + K++ +C++ P ++ E + + + C C G FR+ EKT ++Q+ Sbjct: 143 IYKATYKHIHPDCMQ--EFEWPEDEEMPEVLEMPTICPKCGKPGQFRLIPEKTKLIDWQK 200 Query: 388 VTLQEAPGTVPPGRLPRHREVILLADLVDVSKPGEEVEVTGIYKNNYDGNLNAKNGFPVF 447 +QE P VP G+LPR E+IL DLVD ++PG+ V+VTGI D + + VF Sbjct: 201 AVIQERPEEVPSGQLPRQLEIILEDDLVDSARPGDRVKVTGILDIKQDSPVK-RGSRAVF 259 Query: 448 ATIIEANSIKRREGNTANEGEEGLDVFSWTEEEEREFRKISRDRGIIDKIISSMAPSIYG 507 ++ +SI+ ++ LD +EE+E++ + +++D I D+IISS+APSIYG Sbjct: 260 DIYMKVSSIEV--------SQKVLDEVIISEEDEKKIKDLAKDPWIRDRIISSIAPSIYG 311 Query: 508 HRDIKTAVACSLFGGVPKNVNGKHSIRGDINVLLLGDPGTAKSQILKYVEKTAHRAVFAT 567 H ++K A+A +LFGGVPK + IRGDI++L++GDPGTAKSQ+L+++ + A RAV+ T Sbjct: 312 HWELKEALALALFGGVPKVLEDTR-IRGDIHILIIGDPGTAKSQMLQFISRVAPRAVYTT 370 Query: 568 GQGASAVGLTASVRKDPITKEWTLEGGALVLADKGVCLIDEFDKMNDQDRTSIHEAMEQQ 627 G+G++A GLTA+V ++ T E+ LE GALVLAD G+ +IDE DKM D+DR +IHEAMEQQ Sbjct: 371 GKGSTAAGLTAAVVREKGTGEYYLEAGALVLADGGIAVIDEIDKMRDEDRVAIHEAMEQQ 430 Query: 628 SISISKAGIVTTLQARCSIIAAANPNGGRYNSTLPLAQNVSLTEPILSRFDILCVVRDLV 687 ++SI+KAGIV L AR ++IAA NP GRY S P++ N++L ILSRFD++ +++D Sbjct: 431 TVSIAKAGIVAKLNARAAVIAAGNPKFGRYISERPVSDNINLPPTILSRFDLIFILKDQP 490 Query: 688 DEEADERLATFVVDSHVRSHPENDEDREGEELKNNGESAIEQGEDEINEQLNARQRRLQR 747 E+ D LA +++D H G+ KN Sbjct: 491 GEQ-DRELANYILDVH-----------SGKSTKNI------------------------- 513 Query: 748 QRKKEEEISPIPQELLMKYIHYARTKIYPKLHQMDMDKVSRVYADLRRESISTGSFP--I 805 I + L KYI YAR + PK+ + ++ + ++R++S T P I Sbjct: 514 ----------IDIDTLRKYIAYARKYVTPKITSEAKNLITDFFVEMRKKSSETPDSPILI 563 Query: 806 TVRHLESILRIAESFAKMRLSEFVSSYDLDRAIKVV 841 T R LE+++RI+E++AKM L V+ D +RAI ++ Sbjct: 564 TPRQLEALIRISEAYAKMALKAEVTREDAERAINIM 599 >3F9V-A nrPDB Length = 595 Score = 363 bits (932), Expect = e-100, Method: Compositional matrix adjust. Identities = 224/636 (35%), Positives = 356/636 (55%), Gaps = 67/636 (10%) Query: 214 FLLEYTDETGRSVYGARIRTLGEMNSESLEVNYRHLAESKAILALFLAKCPEEMLKIFDL 273 FL + ++ Y RI L +SL + + + LA + + +L I + Sbjct: 11 FLTTFKGNNNQNKYIERINELVAYRKKSLIIEFSDVLSFNENLAYEIINNTKIILPILEG 70 Query: 274 VAMEATELHYPDYARIHSEIHVRISDFPTIYSLRELRESNLSSLVRVTGVVTRRTGVFPQ 333 + P Y R ++HVRI P + LR++R +++ L+ + G++ + T V + Sbjct: 71 ALYDHILQLDPTYQRDIEKVHVRIVGIPRVIELRKIRSTDIGKLITIDGILVKVTPVKER 130 Query: 334 L-----KYVKFNCLKCGSILGPFFQDSNEEIRI-SFCTNCKSKGPFRVNGEKTVYRNYQR 387 + K++ +C++ P ++ E + + + C C G FR+ EKT ++Q+ Sbjct: 131 IYKATYKHIHPDCMQ--EFEWPEDEEMPEVLEMPTICPKCGKPGQFRLIPEKTKLIDWQK 188 Query: 388 VTLQEAPGTVPPGRLPRHREVILLADLVDVSKPGEEVEVTGIYKNNYDGNLNAKNGFPVF 447 +QE P VP G+LPR E+IL DLVD ++PG+ V+VTGI D + + VF Sbjct: 189 AVIQERPEEVPSGQLPRQLEIILEDDLVDSARPGDRVKVTGILDIKQDSPVK-RGSRAVF 247 Query: 448 ATIIEANSIKRREGNTANEGEEGLDVFSWTEEEEREFRKISRDRGIIDKIISSMAPSIYG 507 ++ +SI+ ++ LD +EE+E++ + +++D I D+IISS+APSIYG Sbjct: 248 DIYMKVSSIEV--------SQKVLDEVIISEEDEKKIKDLAKDPWIRDRIISSIAPSIYG 299 Query: 508 HRDIKTAVACSLFGGVPKNVNGKHSIRGDINVLLLGDPGTAKSQILKYVEKTAHRAVFAT 567 H ++K A+A +LFGGVPK + IRGDI++L++GDPGTAKSQ+L+++ + A RAV+ T Sbjct: 300 HWELKEALALALFGGVPKVLEDTR-IRGDIHILIIGDPGTAKSQMLQFISRVAPRAVYTT 358 Query: 568 GQGASAVGLTASVRKDPITKEWTLEGGALVLADKGVCLIDEFDKMNDQDRTSIHEAMEQQ 627 G+G++A GLTA+V ++ T E+ LE GALVLAD G+ +IDE DKM D+DR +IHEAMEQQ Sbjct: 359 GKGSTAAGLTAAVVREKGTGEYYLEAGALVLADGGIAVIDEIDKMRDEDRVAIHEAMEQQ 418 Query: 628 SISISKAGIVTTLQARCSIIAAANPNGGRYNSTLPLAQNVSLTEPILSRFDILCVVRDLV 687 ++SI+KAGIV L AR ++IAA NP GRY S P++ N++L ILSRFD++ +++D Sbjct: 419 TVSIAKAGIVAKLNARAAVIAAGNPKFGRYISERPVSDNINLPPTILSRFDLIFILKDQP 478 Query: 688 DEEADERLATFVVDSHVRSHPENDEDREGEELKNNGESAIEQGEDEINEQLNARQRRLQR 747 E+ D LA +++D H G+ KN Sbjct: 479 GEQ-DRELANYILDVH-----------SGKSTKNI------------------------- 501 Query: 748 QRKKEEEISPIPQELLMKYIHYARTKIYPKLHQMDMDKVSRVYADLRRESISTGSFP--I 805 I + L KYI YAR + PK+ + ++ + ++R++S T P I Sbjct: 502 ----------IDIDTLRKYIAYARKYVTPKITSEAKNLITDFFVEMRKKSSETPDSPILI 551 Query: 806 TVRHLESILRIAESFAKMRLSEFVSSYDLDRAIKVV 841 T R LE+++RI+E++AKM L V+ D +RAI ++ Sbjct: 552 TPRQLEALIRISEAYAKMALKAEVTREDAERAINIM 587 >4R7Y-A nrPDB Length = 613 Score = 357 bits (917), Expect = 9e-99, Method: Compositional matrix adjust. Identities = 221/642 (34%), Positives = 349/642 (54%), Gaps = 70/642 (10%) Query: 214 FLLEYTDETGRSVYGARIRTLGEMNSESLEVNYRHLAESKAILALFLAKCPEEMLKIFDL 273 FL + ++ Y RI L +SL + + + LA + + +L I + Sbjct: 18 FLTTFKGNNNQNKYIERINELVAYRKKSLIIEFSDVLSFNENLAYEIINNTKIILPILEG 77 Query: 274 VAMEATELHYPDYARIHSEIHVRISDFPTIYSLRELRESNLSSLVRVTGVVTRRTGVFPQ 333 + P Y R ++HVRI P + LR++R +++ L+ + G++ + T V + Sbjct: 78 ALYDHILQLDPTYQRDIEKVHVRIVGIPRVIELRKIRSTDIGKLITIDGILVKVTPVKER 137 Query: 334 L-----KYVKFNCLKCGSILGPFFQDSNEEIRI-SFCTNCKSKGPFRVNGEKTVYRNYQR 387 + K++ +C++ P ++ E + + + C C G FR+ EKT ++Q+ Sbjct: 138 IYKATYKHIHPDCMQ--EFEWPEDEEMPEVLEMPTICPKCGKPGQFRLIPEKTKLIDWQK 195 Query: 388 VTLQEAPGTVPPGRLPRHREVILLADLVDVSKPGEEVEVTGIYKNNYDGNLNAKNGFPVF 447 +QE P VP G+LPR E+IL DLVD ++PG+ V+VTGI D + + VF Sbjct: 196 AVIQERPEEVPSGQLPRQLEIILEDDLVDSARPGDRVKVTGILDIKQDSPVK-RGSRAVF 254 Query: 448 ATIIEANSIKRREGNTANEGEEGLDVFSWTEEEEREFRKISRDRGIIDKIISSMAPSIYG 507 ++ +SI+ ++ L + EEE+ +++++ + I+D I+ S+AP+IYG Sbjct: 255 DIYMKVSSIEV--------SQKVLQELEISPEEEQIIKELAKRKDIVDAIVDSIAPAIYG 306 Query: 508 HRDIKTAVACSLFGGVPKNVNGKHSIRGDINVLLLGDPGTAKSQILKYVEKTAHRAVFAT 567 ++++K +A +LFGGV + + +RGDI+VLL+GDPG AKSQIL+YV A RA++ + Sbjct: 307 YKEVKKGIALALFGGVSRKLPDGTRLRGDIHVLLVGDPGVAKSQILRYVANLAPRAIYTS 366 Query: 568 GQGASAVGLTASVRKDPITKEWTLEGGALVLADKGVCLIDEFDKMNDQDRTSIHEAMEQQ 627 G+ +SA GLTA+ +D T W LE GALVLAD G LIDE DKM+D+DR+ IHEA+EQQ Sbjct: 367 GKSSSAAGLTAAAVRDEFTGGWVLEAGALVLADGGYALIDELDKMSDRDRSVIHEALEQQ 426 Query: 628 SISISKAGIVTTLQARCSIIAAANPNGGRYNSTLPLAQNVSLTEPILSRFDILCVVRDLV 687 +ISISKAGI TL AR ++IAAANP GR+N + + L +LSRFD++ V L+ Sbjct: 427 TISISKAGITATLNARTTVIAAANPKQGRFNRMKNPFEQIDLPPTLLSRFDLIFV---LI 483 Query: 688 DEEADERLATFVVDSHVRSHPENDEDREGEELKNNGESAIEQGEDEINEQLNARQRRLQR 747 DE D+ +DS V H L+ Sbjct: 484 DEPDDK------IDSEVARH------------------------------------ILRV 501 Query: 748 QRKKEEEISP-IPQELLMKYIHYARTKIYPKLHQMDMDKVSRVYADLRRESISTGS---- 802 +R + E ++P IP E+L KYI YAR I+P + + M+++ + Y +R+ T Sbjct: 502 RRGESEVVAPKIPHEILRKYIAYARKNIHPVISEEAMEEIEKYYVRMRKSVKKTKGEEEG 561 Query: 803 ---FPITVRHLESILRIAESFAKMRLSEFVSSYDLDRAIKVV 841 PIT R LE+++R++E+ A+MRLS V+ D AIK++ Sbjct: 562 IPPIPITARQLEALIRLSEAHARMRLSPIVTREDAREAIKLM 603 >5XF8-3 nrPDB Length = 997 Score = 319 bits (818), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 219/580 (37%), Positives = 319/580 (55%), Gaps = 56/580 (9%) Query: 305 SLRELRESNLSSLVRVTGVVTRRTGVFPQLKYVKFNCLKCGSILGPFFQD-----SNEEI 359 S R L +L+ LV V G+VT+ + V P+L K G ++D + Sbjct: 193 SPRTLTAQHLNKLVSVEGIVTKTSLVRPKLIRSVHYAAKTGRF---HYRDYTDATTTLTT 249 Query: 360 RIS----FCTNCKSKGPFRVNGEKTVYRNYQRVTLQEAPGTVPPGRLPRHREVILLADLV 415 RI + T + + ++QR+T+QE P P G+LPR +VIL DLV Sbjct: 250 RIPTPAIYPTEDTEGNKLTTEYGYSTFIDHQRITVQEMPEMAPAGQLPRSIDVILDDDLV 309 Query: 416 DVSKPGEEVEVTGIYKNNYDGNLNAKNGFPV--FATIIEANSI----KRREGNTANEGEE 469 D +KPG+ V V G++K+ G +N N + F T+I N++ R G A + Sbjct: 310 DKTKPGDRVNVVGVFKSLGAGGMNQSNSNTLIGFKTLILGNTVYPLHARSTGVAARQMLT 369 Query: 470 GLDVFSWTEEEEREFRKISRDRGIIDKIISSMAPSIYGHRDIKTAVACSLFGGVPKNV-N 528 D+ R K+S+ + I D + S+APSIYGH IK A+ L GGV KN+ N Sbjct: 370 DFDI--------RNINKLSKKKDIFDILSQSLAPSIYGHDHIKKAILLMLMGGVEKNLEN 421 Query: 529 GKHSIRGDINVLLLGDPGTAKSQILKYVEKTAHRAVFATGQGASAVGLTASVRKDPITKE 588 G H +RGDIN+L++GDP TAKSQ+L++V TA A+ TG+G+S VGLTA+V D T E Sbjct: 422 GSH-LRGDINILMVGDPSTAKSQLLRFVLNTASLAIATTGRGSSGVGLTAAVTTDRETGE 480 Query: 589 WTLEGGALVLADKGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLQARCSIIA 648 LE GA+VLAD+GV IDEFDKM D DR +IHE MEQQ+++I+KAGI TTL ARCS+IA Sbjct: 481 RRLEAGAMVLADRGVVCIDEFDKMTDVDRVAIHEVMEQQTVTIAKAGIHTTLNARCSVIA 540 Query: 649 AANPNGGRYNSTLPLAQNVSLTEPILSRFDILCVVRDLVDEEADERLATFVVDSHVRSHP 708 AANP G+Y+ QN++L + +LSRFD+L VV D ++E D ++ V+ +H P Sbjct: 541 AANPVFGQYDVNRDPHQNIALPDSLLSRFDLLFVVTDDINEIRDRSISEHVLRTHRYLPP 600 Query: 709 ------------------ENDEDREGEELKNNGESAIEQGEDE---INEQLNARQRRLQR 747 D D EE N+G +GED+ + E+ N + + Sbjct: 601 GYLEGEPVRERLNLSLAVGEDADINPEEHSNSGAGVENEGEDDEDHVFEKFNPLLQAGAK 660 Query: 748 QRKKEEEI--SPIPQ----ELLMKYIHYARTKIYPKLHQMDMDKVSRVYADLRRESISTG 801 K + + IP+ L KY+ YA+ ++ P+L Q ++ + + Y DLR + +T Sbjct: 661 LAKNKGNYNGTEIPKLVTIPFLRKYVQYAKERVIPQLTQEAINVIVKNYTDLRNDD-NTK 719 Query: 802 SFPITVRHLESILRIAESFAKMRLSEFVSSYDLDRAIKVV 841 PIT R LE+++R+A + AK+RLS+ V+ D A ++ Sbjct: 720 KSPITARTLETLIRLATAHAKVRLSKTVNKVDAKVAANLL 759 >3JC6-4 nrPDB Length = 933 Score = 319 bits (817), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 214/680 (31%), Positives = 341/680 (50%), Gaps = 87/680 (12%) Query: 205 RTIARELKSFLLEYTDETGRSVYGARIRTLGEMNSESLEVNYRHLAESKAILALF--LAK 262 R I E + F+ TDE Y ++ + E+ + +L ++ R+L K L+ L Sbjct: 206 RKILDEREEFINNTTDE--ELYYIKQLNEMRELGTSNLNLDARNLLAYKQTEDLYHQLLN 263 Query: 263 CPEEMLKIFDLVAMEA-------TELHYPDYARIHSEIH-VRISDFPTIYSLRELRESNL 314 P+E++ I D + L Y D I ++ + VR + + +REL +++ Sbjct: 264 YPQEVISIMDQTIKDCMVSLIVDNNLDY-DLDEIETKFYKVRPYNVGSCKGMRELNPNDI 322 Query: 315 SSLVRVTGVVTRRTGVFPQLKYVKFNCLKCGSILG-----PFFQDSNEEIRISFCTNCKS 369 L+ + G+V R T V P +K F C C + Q+ RI +C Sbjct: 323 DKLINLKGLVLRSTPVIPDMKVAFFKCNVCDHTMAVEIDRGVIQEPARCERI----DCNE 378 Query: 370 KGPFRVNGEKTVYRNYQRVTLQEAPGTVPPGRLPRHREVILLADLVDVSKPGEEVEVTGI 429 + + + + Q + LQE P VP G+ P + + +LVD + G+ +EVTG Sbjct: 379 PNSMSLIHNRCSFADKQVIKLQETPDFVPDGQTPHSISLCVYDELVDSCRAGDRIEVTGT 438 Query: 430 YK------NNYDGNLNAKNGFPVFATIIEANSI--KRREGNTANEGEEGL---------- 471 ++ N+ L K+ + + ++ + KR + +T+ +E + Sbjct: 439 FRSIPIRANSRQRVL--KSLYKTYVDVVHVKKVSDKRLDVDTSTIEQELMQNKVDHNEVE 496 Query: 472 DVFSWTEEEEREFRKISRDRGIIDKIISSMAPSIYGHRDIKTAVACSLFGGVPKNVNGKH 531 +V T+++ + R+++ + + S+APSIY D+K + LFGG K Sbjct: 497 EVRQITDQDLAKIREVAAREDLYSLLARSIAPSIYELEDVKKGILLQLFGGTNKTFTKGG 556 Query: 532 SIRGDINVLLLGDPGTAKSQILKYVEKTAHRAVFATGQGASAVGLTASVRKDPITKEWTL 591 RGDIN+LL GDP T+KSQIL+YV K R V+ +G+G+SAVGLTA + +D TK+ L Sbjct: 557 RYRGDINILLCGDPSTSKSQILQYVHKITPRGVYTSGKGSSAVGLTAYITRDVDTKQLVL 616 Query: 592 EGGALVLADKGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLQARCSIIAAAN 651 E GALVL+D GVC IDEFDKM+D R+ +HE MEQQ+ISI+KAGI+TTL AR SI+A+AN Sbjct: 617 ESGALVLSDGGVCCIDEFDKMSDSTRSVLHEVMEQQTISIAKAGIITTLNARSSILASAN 676 Query: 652 PNGGRYNSTLPLAQNVSLTEPILSRFDILCVVRDLVDEEADERLATFVVDSHVRSHPEND 711 P G RYN LP+ +N+ L P+LSRFD++ +V D VDE+ D LA + + ++ PE+ Sbjct: 677 PIGSRYNPNLPVTENIDLPPPLLSRFDLVYLVLDKVDEKNDRELAKHLTNLYLEDKPEH- 735 Query: 712 EDREGEELKNNGESAIEQGEDEINEQLNARQRRLQRQRKKEEEISPIPQELLMKYIHYAR 771 +D++ +P E L YI YA+ Sbjct: 736 -----------------ISQDDV-----------------------LPVEFLTMYISYAK 755 Query: 772 TKIYPKLHQMDMDKVSRVYADLRRESISTGS----FPITVRHLESILRIAESFAKMRLSE 827 I+P + + ++ R Y +R+ + S T R LES++R+AE+ AKM+L Sbjct: 756 EHIHPIITEAAKTELVRAYVGMRKMGDDSRSDEKRITATTRQLESMIRLAEAHAKMKLKN 815 Query: 828 FVSSYDLDRAIKVVVDSFVD 847 V D+ A++++ + D Sbjct: 816 VVELEDVQEAVRLIRSAIKD 835 >5BK4-5 nrPDB Length = 775 Score = 309 bits (792), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 229/704 (32%), Positives = 347/704 (49%), Gaps = 101/704 (14%) Query: 207 IARELKSFLLEYTDETGRSVYGARIRTLGEMNSESLEVNYRHLAESKAILALFLAKCPEE 266 I + K+F+LE+ ++ + +Y ++R + + SL VN HL + L+ P + Sbjct: 27 IIKSFKNFILEFRLDS-QFIYRDQLRNNILVKNYSLTVNMEHLIGYNEDIYKKLSDEPSD 85 Query: 267 MLKIFDLVAMEATELHYPDYARIHSEIH--------------VRISDFPTI--------- 303 ++ +F+ A+ +R S + + ++ PT Sbjct: 86 IIPLFE-TAITQVAKRISILSRAQSANNNDKDPENTSMDTDSLLLNSLPTFQLILNSNAN 144 Query: 304 -YSLRELRESNLSSLVRVTGVVTRRTGVFPQLKYVKFNCLKCGSILGPFFQDSNEEI--R 360 LR+L ++S +VR++G++ + + + Y+ C C + N Sbjct: 145 QIPLRDLDSEHVSKIVRLSGIIISTSVLSSRATYLSIMCRNCRHTTSITINNFNSITGNT 204 Query: 361 ISFCTNCKSK------------------------GPFRVNGEKTVYRNYQRVTLQEAPGT 396 +S +C S P+ + E + + + Q + LQE P Sbjct: 205 VSLPRSCLSTIESESSMANESNIGDESTKKNCGPDPYIIIHESSKFIDQQFLKLQEIPEL 264 Query: 397 VPPGRLPRHREVILLADLVDVSKPGEEVEVTGIYK----NNYDGNLNAKNGFPVFATIIE 452 VP G +PR+ + L + PG V + GIY N G+ + G I Sbjct: 265 VPVGEMPRNLTMTCDRYLTNKVIPGTRVTIVGIYSIYNSKNGAGSGRSGGGNGGSGVAIR 324 Query: 453 ANSIKRREGNTANEGEEGLD-VFSWTEEEEREFRKISRDRGIIDKIISSMAPSIYGHRDI 511 IK + E + V +TEEEE EF ++SR+ + + + +S+APSI+G+ DI Sbjct: 325 TPYIKILGIQSDVETSSIWNSVTMFTEEEEEEFLQLSRNPKLYEILTNSIAPSIFGNEDI 384 Query: 512 KTAVACSLFGGVPKNVNGKHSIRGDINVLLLGDPGTAKSQILKYVEKTAHRAVFATGQGA 571 K A+ C L GG K + +RGDINVLLLGDPGTAKSQ+LK+VEK + AV+ +G+G+ Sbjct: 385 KKAIVCLLMGGSKKILPDGMRLRGDINVLLLGDPGTAKSQLLKFVEKVSPIAVYTSGKGS 444 Query: 572 SAVGLTASVRKDPITKEWTLEGGALVLADKGVCLIDEFDKMNDQDRTSIHEAMEQQSISI 631 SA GLTASV++DP+T+E+ LEGGA+VLAD GV IDEFDKM D+DR +IHEAMEQQ+ISI Sbjct: 445 SAAGLTASVQRDPMTREFYLEGGAMVLADGGVVCIDEFDKMRDEDRVAIHEAMEQQTISI 504 Query: 632 SKAGIVTTLQARCSIIAAANPNGGRYNSTLPLAQNVSLTEPILSRFDILCVVRDLVDEEA 691 +KAGI T L +R S++AAANP GRY+ N+ ILSRFD++ +V+D +EE Sbjct: 505 AKAGITTVLNSRTSVLAAANPIYGRYDDLKSPGDNIDFQTTILSRFDMIFIVKDDHNEER 564 Query: 692 DERLATFVVDSHVRSHPENDEDREGEELKNNGESAIEQGEDEINEQLNARQRRLQRQRKK 751 D +A V++ H N + Q ++ Sbjct: 565 DISIANHVINIHT----------------GNANAM---------------------QNQQ 587 Query: 752 EEEISPIPQELLMKYIHYARTKIYPKLHQMDMDKVSRVYADLRR-------ESISTGSFP 804 EE S I E + +YI Y R K P+L +K+S + +R+ ES S P Sbjct: 588 EENGSEISIEKMKRYITYCRLKCAPRLSPQAAEKLSSNFVTIRKQLLINELESTERSSIP 647 Query: 805 ITVRHLESILRIAESFAKMRLSEFVSSYDLDRAIKVVVDSFVDA 848 IT+R LE+I+RI ES AK+ LS +D AI++ S +DA Sbjct: 648 ITIRQLEAIIRITESLAKLELSPIAQERHVDEAIRLFQASTMDA 691 >5U8S-7 nrPDB Length = 845 Score = 302 bits (773), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 200/552 (36%), Positives = 299/552 (54%), Gaps = 72/552 (13%) Query: 305 SLRELRESNLSSLVRVTGVVTRRTGVFPQLKYVKFNCLKCG---------SILGPFFQDS 355 S+R+++ L L+ V G++TR + V P ++ + + C +CG P + + Sbjct: 226 SVRQIKGDFLGQLITVRGIITRVSDVKPAVEVIAYTCDQCGYEVFQEVNSRTFTPLSECT 285 Query: 356 NEEIRISFCTNCKSKGPFRVNGEKTVYRNYQRVTLQEAPGTVPPGRLPRHREVILLADLV 415 +EE C+ ++KG ++ + + +Q +QE VP G +PR + + LV Sbjct: 286 SEE-----CSQNQTKGQLFMSTRASKFSAFQECKIQELSQQVPVGHIPRSLNIHVNGTLV 340 Query: 416 DVSKPGEEVEVTGIY-KNNYDGNLNAKNGFPVFATIIEANSIKRREGNTANEGEEGLDVF 474 PG+ V+VTGI+ Y G K G + T +EA +++ + A+ F Sbjct: 341 RSLSPGDIVDVTGIFLPAPYTGFKALKAGL-LTETYLEAQFVRQHKKKFAS--------F 391 Query: 475 SWTEEEEREFRKISRDRGIIDKIISSMAPSIYGHRDIKTAVACSLFGGVPKNVNGKHSIR 534 S T + E ++ + +++ S+AP IYG+ D+K A+ L GGV K V IR Sbjct: 392 SLTSDVEERVMELITSGDVYNRLAKSIAPEIYGNLDVKKALLLLLVGGVDKRVGDGMKIR 451 Query: 535 GDINVLLLGDPGTAKSQILKYVEKTAHRAVFATGQGASAVGLTASVRKDPITKEWTLEGG 594 GDINV L+GDPG AKSQ+LK + K + R V+ TG+G+S VGLTA+V KDP+T E LEGG Sbjct: 452 GDINVCLMGDPGVAKSQLLKAICKISPRGVYTTGKGSSGVGLTAAVMKDPVTDEMILEGG 511 Query: 595 ALVLADKGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLQARCSIIAAANPNG 654 ALVLAD G+C IDEFDKM++ DRT+IHE MEQQ+ISISKAGI TTL AR SI+AAANP Sbjct: 512 ALVLADNGICCIDEFDKMDESDRTAIHEVMEQQTISISKAGINTTLNARTSILAAANPLY 571 Query: 655 GRYNSTLPLAQNVSLTEPILSRFDILCVVRDLVDEEADERLATFVVDSHVRSHPENDEDR 714 GRYN L N++L +LSRFDIL ++ D+ + DE+LA V H+ + Sbjct: 572 GRYNPRLSPLDNINLPAALLSRFDILFLMLDIPSRDDDEKLAEHVTYVHMHN-------- 623 Query: 715 EGEELKNNGESAIEQGEDEINEQLNARQRRLQRQRKKEEEISPIPQELLMKYIHYARTKI 774 ++ + + +P+ + +YI YA+TK Sbjct: 624 ----------------------------------KQPDLDFTPVEPSKMREYIAYAKTK- 648 Query: 775 YPKLHQMDMDKVSRVYADLR----RESISTGSF-PITVRHLESILRIAESFAKMRLSEFV 829 P + + D V + Y LR RE S SF T R L I+R++++ AK+RL++ V Sbjct: 649 RPVMSEAVNDYVVQAYIRLRQDSKREMDSKFSFGQATPRTLLGIIRLSQALAKLRLADMV 708 Query: 830 SSYDLDRAIKVV 841 D++ A+++V Sbjct: 709 DIDDVEEALRLV 720 >4R7Z-A nrPDB Length = 338 Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 133/373 (35%), Positives = 201/373 (53%), Gaps = 53/373 (14%) Query: 477 TEEEEREFRKISRDRGIIDKIISSMAPSIYGHRDIKTAVACSLFGGVPKNVNGKHSIRGD 536 + EEE+ +++++ + I+D I+ S+AP+IYG++++K +A +LFGGV + + +RGD Sbjct: 1 SPEEEQIIKELAKRKDIVDAIVDSIAPAIYGYKEVKKGIALALFGGVSRKLPDGTRLRGD 60 Query: 537 INVLLLGDPGTAKSQILKYVEKTAHRAVFATGQGASAVGLTASVRKDPITKEWTLEGGAL 596 I+VLL+GDPG AKSQIL+YV A RA++ + Sbjct: 61 IHVLLVGDPGVAKSQILRYVANLAPRAIYTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120 Query: 597 VLADKGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLQARCSIIAAANPNGGR 656 G LIDE DKM+D+DR+ IHEA+EQQ+ISISKAGI TL AR ++IAAANP GR Sbjct: 121 XXXXGGYALIDELDKMSDRDRSVIHEALEQQTISISKAGITATLNARTTVIAAANPKQGR 180 Query: 657 YNSTLPLAQNVSLTEPILSRFDILCVVRDLVDEEADERLATFVVDSHVRSHPENDEDREG 716 +N + + L +LSRFD++ V L+DE D+ +DS V H Sbjct: 181 FNRMKNPFEQIDLPPTLLSRFDLIFV---LIDEPDDK------IDSEVARH--------- 222 Query: 717 EELKNNGESAIEQGEDEINEQLNARQRRLQRQRKKEEEISP-IPQELLMKYIHYARTKIY 775 L+ +R + E ++P IP E+L KYI YAR I+ Sbjct: 223 ---------------------------ILRVRRGESEVVAPKIPHEILRKYIAYARKNIH 255 Query: 776 PKLHQMDMDKVSRVYADLRRESISTGS-------FPITVRHLESILRIAESFAKMRLSEF 828 P + + M+++ + Y +R+ T PIT R LE+++R++E+ A+MRLS Sbjct: 256 PVISEEAMEEIEKYYVRMRKSVKKTKGEEEGIPPIPITARQLEALIRLSEAHARMRLSPI 315 Query: 829 VSSYDLDRAIKVV 841 V+ D AIK++ Sbjct: 316 VTREDAREAIKLM 328 >3F8T-A nrPDB Length = 506 Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 64/205 (31%), Positives = 108/205 (52%), Gaps = 20/205 (9%) Query: 480 EEREFRKISRDRGIIDKIISSMAPSIYGHRDIKTAVACSLFGGVPKNVNGKHSIRGDINV 539 E EFR+++ D+ + ++AP + G ++ +A LF V KN H V Sbjct: 192 ELEEFRELA-DKDPLTTFARAIAP-LPGAEEVGKMLALQLFSCVGKNSERLH-------V 242 Query: 540 LLLGDPGTAKSQILKYV-EKTAHRAVFATGQGASAVGLTASVRKDPITKEWTLEGGALVL 598 LL G P S+IL +V + A R V+ + LTA +++D + W L GA VL Sbjct: 243 LLAGYP-VVCSEILHHVLDHLAPRGVYVDLRRTELTDLTAVLKED---RGWALRAGAAVL 298 Query: 599 ADKGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLQARCSIIAAANPNGGRYN 658 AD G+ +D + + R ++ EAM++ ++++ GI L ARC+++AA NP G ++ Sbjct: 299 ADGGILAVDHLEGAPEPHRWALMEAMDKGTVTVD--GI--ALNARCAVLAAINP-GEQWP 353 Query: 659 STLPLAQNVSLTEPILSRFDILCVV 683 S P+A+ + L + LS FD++ + Sbjct: 354 SDPPIAR-IDLDQDFLSHFDLIAFL 377 Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 7/102 (6%) Query: 747 RQRKKEEEISPIPQ-ELLMKYIHYA-RTKIYPKLHQMDMDKVSRVYADLRRE-----SIS 799 R + EE+ + +P LL +Y+ YA R P+L + ++ Y R E + Sbjct: 382 RPGEPEEQDTEVPSYTLLRRYLLYAIREHPAPELTEEARKRLEHWYETRREEVEERLGMG 441 Query: 800 TGSFPITVRHLESILRIAESFAKMRLSEFVSSYDLDRAIKVV 841 + P+T R LES+ R+A++ A+MRLS+ V D+D A ++V Sbjct: 442 LPTLPVTRRQLESVERLAKAHARMRLSDDVEPEDVDIAAELV 483 >3D8B-A nrPDB Length = 357 Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust. Identities = 33/124 (26%), Positives = 51/124 (41%), Gaps = 23/124 (18%) Query: 538 NVLLLGDPGTAKSQILKYVEKTAHRAVFATGQGASAVGLTASVRKDPITKEWTLEGGALV 597 +LL G PGT K+ I K + A+ GA+ ++AS +T +W EG +V Sbjct: 119 GILLFGPPGTGKTLIGKCI---------ASQSGATFFSISASS----LTSKWVGEGEKMV 165 Query: 598 LA--------DKGVCLIDEFDKMNDQDRTSIHEAME--QQSISISKAGIVTTLQARCSII 647 A V IDE D + Q HE+ + + G T+ + R ++ Sbjct: 166 RALFAVARCQQPAVIFIDEIDSLLSQRGDGEHESSRRIKTEFLVQLDGATTSSEDRILVV 225 Query: 648 AAAN 651 A N Sbjct: 226 GATN 229 >4ZPX-A nrPDB Length = 413 Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 42/105 (40%), Gaps = 13/105 (12%) Query: 562 RAVFATGQGASAVGLTASVRKDPITKEWT-------LEGGALVLADKGVCLIDEFDKMND 614 +A F GA A L VR DP +E G + A KGV IDE ++ Sbjct: 193 KAPFIDATGAHAGALLGDVRHDPFQSGGLGTPAHERVEPGMIHRAHKGVLFIDEIATLSL 252 Query: 615 QDRTSIHEAMEQQSISI------SKAGIVTTLQARCSIIAAANPN 653 + + S+ AM+++ I S +V T C + A N Sbjct: 253 KMQQSLLTAMQEKKFPITGQSEMSSGAMVRTEPVPCDFVLVAAGN 297 >3K1J-A nrPDB Length = 604 Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 42/105 (40%), Gaps = 13/105 (12%) Query: 562 RAVFATGQGASAVGLTASVRKDPITKEWT-------LEGGALVLADKGVCLIDEFDKMND 614 +A F GA A L VR DP +E G + A KGV IDE ++ Sbjct: 156 KAPFIDATGAHAGALLGDVRHDPFQSGGLGTPAHERVEPGMIHRAHKGVLFIDEIATLSL 215 Query: 615 QDRTSIHEAMEQQSISI------SKAGIVTTLQARCSIIAAANPN 653 + + S+ AM+++ I S +V T C + A N Sbjct: 216 KMQQSLLTAMQEKKFPITGQSEMSSGAMVRTEPVPCDFVLVAAGN 260 >1OFI-A nrPDB Length = 310 Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 10/124 (8%) Query: 496 KIISSMAPSIYGHRDIKTAVACSLFGGVPKNVNGKHSIRGDI---NVLLLGDPGTAKSQI 552 +I+S + I G D K AVA +L + + + +R ++ N+L++G G K++I Sbjct: 8 EIVSELDQHIIGQADAKRAVAIALRNRW-RRMQLQEPLRHEVTPKNILMIGPTGVGKTEI 66 Query: 553 LKYVEKTAHRAVFATGQGA--SAVGLTASVRKDPITKEWT-LEGGAL-VLADKGVCLIDE 608 + + K A+ A F + + VG D I ++ T GGA+ + G+ IDE Sbjct: 67 ARRLAKLAN-APFIKVEATKFTEVGYVGK-EVDSIIRDLTDSAGGAIDAVEQNGIVFIDE 124 Query: 609 FDKM 612 DK+ Sbjct: 125 IDKI 128 >3V44-A nrPDB Length = 407 Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust. Identities = 23/101 (22%), Positives = 49/101 (48%), Gaps = 16/101 (15%) Query: 60 DIDEVEEQMNEVDLMDDNMY------EDYAADHNRDRYDPDQVDDREQQELSLSERRRID 113 D++++ NE++ +DDN + ++ A D N+ + PD + DR L+ ++I Sbjct: 300 DLEQLTLAQNEINKIDDNAFWGLTHLKELALDTNQLKSVPDGIFDR------LTSLQKIW 353 Query: 114 AQLNERDRLLRNVAY----IDDEDEEQEGAAQLDEMGLPVQ 150 N D + Y ++ ++++G+A+ G PV+ Sbjct: 354 LHTNPWDCSCPRIDYLSRWLNKNSQKEQGSAKCSGSGKPVR 394 >3DZD-A nrPDB Length = 368 Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust. Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 8/121 (6%) Query: 539 VLLLGDPGTAKSQILKYVEK-TAHRAVFATGQGAS-----AVGLTASVRKDPITKEWTLE 592 VL+ G+ GT K + + + + + + F AS A K T T + Sbjct: 155 VLITGESGTGKEIVARLIHRYSGRKGAFVDLNCASIPQELAESELFGHEKGAFTGALTRK 214 Query: 593 GGALVLADKGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLQARCSIIAAANP 652 G L LAD+G +DE +++ + + + +E S ++ G ++ +I+A N Sbjct: 215 KGKLELADQGTLFLDEVGELDQRVQAKLLRVLETG--SFTRLGGNQKIEVDIRVISATNK 272 Query: 653 N 653 N Sbjct: 273 N 273 >5WZK-A nrPDB Length = 546 Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust. Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 18/108 (16%) Query: 682 VVRDLVDEEADERLATFVVDSHVRSHPENDEDREG---EELKNNGESAIEQGEDEINEQL 738 V ++ + E + +R A FV+ + + SH D+++ G EEL + +EQG+ + L Sbjct: 273 VFKNSLFELSVDRCANFVIQALI-SHA-RDQEQMGIMWEELAPRFKDLLEQGKSGVVASL 330 Query: 739 NARQRRLQRQRKK-------------EEEISPIPQELLMKYIHYARTK 773 A +RLQ K E IS +P+ L + Y R K Sbjct: 331 IAVSQRLQSHENKCCEALVGAVCSTNESRISILPRLLFLDYYFGCRDK 378 >5WZJ-A nrPDB Length = 582 Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust. Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 18/108 (16%) Query: 682 VVRDLVDEEADERLATFVVDSHVRSHPENDEDREG---EELKNNGESAIEQGEDEINEQL 738 V ++ + E + +R A FV+ + + SH D+++ G EEL + +EQG+ + L Sbjct: 309 VFKNSLFELSVDRCANFVIQALI-SHAR-DQEQMGIMWEELAPRFKDLLEQGKSGVVASL 366 Query: 739 NARQRRLQRQRKK-------------EEEISPIPQELLMKYIHYARTK 773 A +RLQ K E IS +P+ L + Y R K Sbjct: 367 IAVSQRLQSHENKCCEALVGAVCSTNESRISILPRLLFLDYYFGCRDK 414 >3CRV-A nrPDB Length = 551 Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust. Identities = 23/102 (22%), Positives = 53/102 (51%), Gaps = 5/102 (4%) Query: 728 EQGEDEINEQLNARQRRLQRQRKKEEEISPIPQELLMKYIHYARTKIYPKLHQMDMDKVS 787 E+ EI Q+ +Q + + R+ ++ +E+++ Y + + PKL + +++ ++ Sbjct: 193 ERSLSEITIQMAIKQSKSEESRRILSKLLNQLREVVLPDEKYIKVENVPKLSKEELEILA 252 Query: 788 RVYADLRRESISTGSFPITVRHLESILRIAESFAKMRLSEFV 829 Y D+R++S+ G + H+ SILR F+ + + F+ Sbjct: 253 DDYEDIRKDSLKQGK--VNKIHIGSILRF---FSLLSIGSFI 289 >2R65-A nrPDB Length = 268 Score = 30.8 bits (68), Expect = 3.0, Method: Composition-based stats. Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 5/49 (10%) Query: 539 VLLLGDPGTAKSQILKYVEKTAHRAVFATGQGAS----AVGLTASVRKD 583 VLL+G PGT K+ + K V AH F+ G G+S VGL AS +D Sbjct: 47 VLLVGPPGTGKTLLAKAVAGEAHVPFFSMG-GSSFIEMFVGLGASRVRD 94 >5EXS-A nrPDB Length = 260 Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust. Identities = 32/125 (25%), Positives = 47/125 (37%), Gaps = 9/125 (7%) Query: 536 DINVLLLGDPGTAKSQI---LKYVEKTAHRAVFATGQGASAVGLTAS----VRKDPITKE 588 D +VL+LG+ GT K + L Y K GA L S K T Sbjct: 33 DASVLILGESGTGKEVVARNLHYHSKRREGPFVPVNCGAIPAELLESELFGHEKGAFTGA 92 Query: 589 WTLEGGALVLADKGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLQARCSIIA 648 T G LA+ G +DE M + + ++++ + + G T IIA Sbjct: 93 ITSRAGRFELANGGTLFLDEIGDMPLPMQVKLLRVLQER--TFERVGSNKTQNVDVRIIA 150 Query: 649 AANPN 653 A + N Sbjct: 151 ATHKN 155 >6AS7-A nrPDB Length = 922 Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 11/81 (13%) Query: 132 EDEEQEGAAQLD----EMG-LP------VQRRRRRRQYEDLENSDDDLLSDMDIDPLREE 180 ED EQE +L EMG LP V+RR++ +Q ++ + DL+ DI + Sbjct: 556 EDGEQEQIPELPDPSLEMGILPREIRKLVERRKQVKQLMKQQDLNPDLILQYDIRQKALK 615 Query: 181 LTLESLSNVKANSYSEWITQP 201 LT S+ SYS + +P Sbjct: 616 LTANSMYGCLGFSYSRFYAKP 636 >4L16-A nrPDB Length = 334 Score = 29.6 bits (65), Expect = 6.6, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 29/81 (35%), Gaps = 21/81 (25%) Query: 538 NVLLLGDPGTAKSQILKYVEKTAHRAVFATGQGASAVGLTASVRKDPITKEWTLEGGALV 597 VLL G PGT K+ I + V F ++ +T +W EG LV Sbjct: 91 GVLLFGPPGTGKTMIGRCVASQCKATFF-------------NISASSLTSKWVGEGEKLV 137 Query: 598 --------LADKGVCLIDEFD 610 L V IDE D Sbjct: 138 RALFSVARLKLPSVIFIDEID 158 >5EXX-A nrPDB Length = 343 Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust. Identities = 32/125 (25%), Positives = 47/125 (37%), Gaps = 9/125 (7%) Query: 536 DINVLLLGDPGTAKSQI---LKYVEKTAHRAVFATGQGASAVGLTAS----VRKDPITKE 588 D +VL+LG+ GT K + L Y K GA L S K T Sbjct: 33 DASVLILGESGTGKEVVARNLHYHSKRREGPFVPVNCGAIPAELLESELFGHEKGAFTGA 92 Query: 589 WTLEGGALVLADKGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLQARCSIIA 648 T G LA+ G +DE M + + ++++ + + G T IIA Sbjct: 93 ITSRAGRFELANGGTLFLDEIGDMPLPMQVKLLRVLQER--TFERVGSNKTQNVDVRIIA 150 Query: 649 AANPN 653 A + N Sbjct: 151 ATHKN 155 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3JC7-2 nrPDB 1273 0.0 4R7Y-A nrPDB 758 0.0 3F9V-A nrPDB 733 0.0 4FDG-B nrPDB 730 0.0 3JC6-4 nrPDB 660 0.0 5BK4-5 nrPDB 651 0.0 5XF8-3 nrPDB 579 e-165 5U8S-7 nrPDB 533 e-151 4R7Z-A nrPDB 382 e-106 3F8T-A nrPDB 235 7e-62 Sequences not found previously or not previously below threshold: 4QHS-A nrPDB 40 0.004 5EXS-A nrPDB 39 0.007 3JCM-G nrPDB 39 0.012 5EXX-A nrPDB 38 0.017 4ZPX-A nrPDB 37 0.037 3DZD-A nrPDB 37 0.049 6AS7-A nrPDB 37 0.049 1OFI-A nrPDB 36 0.057 3K1J-A nrPDB 36 0.078 5V8F-8 nrPDB 35 0.17 6HIV-A1 nrPDB 34 0.23 1NY5-A nrPDB 34 0.25 1IN6-A nrPDB 34 0.40 4A2W-A nrPDB 34 0.41 6D00-1 nrPDB 33 0.50 4V1O-Q nrPDB 33 0.59 4L4U-A nrPDB 33 0.64 4BS1-B nrPDB 33 0.69 2R44-A nrPDB 32 0.81 3VV5-A nrPDB 32 0.98 4YPL-A nrPDB 32 1.0 4LZZ-A nrPDB 32 1.2 6GYL-Q nrPDB 32 1.2 3V44-A nrPDB 32 1.2 3M6A-A nrPDB 32 1.3 4YPN-A nrPDB 32 1.4 4OH7-A nrPDB 31 1.6 3ICS-A nrPDB 31 1.7 5WWN-A nrPDB 31 1.9 6FAI-k nrPDB 31 2.0 1OJL-A nrPDB 31 2.5 3U5Z-B nrPDB 31 3.2 1HQC-A nrPDB 31 3.3 3CRV-A nrPDB 31 3.4 6D8Z-A nrPDB 30 3.7 4BL8-A nrPDB 30 3.9 4QMD-A nrPDB 30 4.1 5BNX-C nrPDB 30 4.2 5W4K-1E nrPDB 30 5.5 6N8J-m nrPDB 29 6.9 4F8X-A nrPDB 29 7.5 2D2N-C nrPDB 29 7.7 CONVERGED! >3JC7-2 nrPDB Length = 868 Score = 1273 bits (3294), Expect = 0.0, Method: Composition-based stats. Identities = 868/868 (100%), Positives = 868/868 (100%) Query: 1 MSDNRRRRREEDDSDSENELPPSSPQQHFRGGMNPVSSPIGSPDMINPEGDDNEVDDVPD 60 MSDNRRRRREEDDSDSENELPPSSPQQHFRGGMNPVSSPIGSPDMINPEGDDNEVDDVPD Sbjct: 1 MSDNRRRRREEDDSDSENELPPSSPQQHFRGGMNPVSSPIGSPDMINPEGDDNEVDDVPD 60 Query: 61 IDEVEEQMNEVDLMDDNMYEDYAADHNRDRYDPDQVDDREQQELSLSERRRIDAQLNERD 120 IDEVEEQMNEVDLMDDNMYEDYAADHNRDRYDPDQVDDREQQELSLSERRRIDAQLNERD Sbjct: 61 IDEVEEQMNEVDLMDDNMYEDYAADHNRDRYDPDQVDDREQQELSLSERRRIDAQLNERD 120 Query: 121 RLLRNVAYIDDEDEEQEGAAQLDEMGLPVQRRRRRRQYEDLENSDDDLLSDMDIDPLREE 180 RLLRNVAYIDDEDEEQEGAAQLDEMGLPVQRRRRRRQYEDLENSDDDLLSDMDIDPLREE Sbjct: 121 RLLRNVAYIDDEDEEQEGAAQLDEMGLPVQRRRRRRQYEDLENSDDDLLSDMDIDPLREE 180 Query: 181 LTLESLSNVKANSYSEWITQPNVSRTIARELKSFLLEYTDETGRSVYGARIRTLGEMNSE 240 LTLESLSNVKANSYSEWITQPNVSRTIARELKSFLLEYTDETGRSVYGARIRTLGEMNSE Sbjct: 181 LTLESLSNVKANSYSEWITQPNVSRTIARELKSFLLEYTDETGRSVYGARIRTLGEMNSE 240 Query: 241 SLEVNYRHLAESKAILALFLAKCPEEMLKIFDLVAMEATELHYPDYARIHSEIHVRISDF 300 SLEVNYRHLAESKAILALFLAKCPEEMLKIFDLVAMEATELHYPDYARIHSEIHVRISDF Sbjct: 241 SLEVNYRHLAESKAILALFLAKCPEEMLKIFDLVAMEATELHYPDYARIHSEIHVRISDF 300 Query: 301 PTIYSLRELRESNLSSLVRVTGVVTRRTGVFPQLKYVKFNCLKCGSILGPFFQDSNEEIR 360 PTIYSLRELRESNLSSLVRVTGVVTRRTGVFPQLKYVKFNCLKCGSILGPFFQDSNEEIR Sbjct: 301 PTIYSLRELRESNLSSLVRVTGVVTRRTGVFPQLKYVKFNCLKCGSILGPFFQDSNEEIR 360 Query: 361 ISFCTNCKSKGPFRVNGEKTVYRNYQRVTLQEAPGTVPPGRLPRHREVILLADLVDVSKP 420 ISFCTNCKSKGPFRVNGEKTVYRNYQRVTLQEAPGTVPPGRLPRHREVILLADLVDVSKP Sbjct: 361 ISFCTNCKSKGPFRVNGEKTVYRNYQRVTLQEAPGTVPPGRLPRHREVILLADLVDVSKP 420 Query: 421 GEEVEVTGIYKNNYDGNLNAKNGFPVFATIIEANSIKRREGNTANEGEEGLDVFSWTEEE 480 GEEVEVTGIYKNNYDGNLNAKNGFPVFATIIEANSIKRREGNTANEGEEGLDVFSWTEEE Sbjct: 421 GEEVEVTGIYKNNYDGNLNAKNGFPVFATIIEANSIKRREGNTANEGEEGLDVFSWTEEE 480 Query: 481 EREFRKISRDRGIIDKIISSMAPSIYGHRDIKTAVACSLFGGVPKNVNGKHSIRGDINVL 540 EREFRKISRDRGIIDKIISSMAPSIYGHRDIKTAVACSLFGGVPKNVNGKHSIRGDINVL Sbjct: 481 EREFRKISRDRGIIDKIISSMAPSIYGHRDIKTAVACSLFGGVPKNVNGKHSIRGDINVL 540 Query: 541 LLGDPGTAKSQILKYVEKTAHRAVFATGQGASAVGLTASVRKDPITKEWTLEGGALVLAD 600 LLGDPGTAKSQILKYVEKTAHRAVFATGQGASAVGLTASVRKDPITKEWTLEGGALVLAD Sbjct: 541 LLGDPGTAKSQILKYVEKTAHRAVFATGQGASAVGLTASVRKDPITKEWTLEGGALVLAD 600 Query: 601 KGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLQARCSIIAAANPNGGRYNST 660 KGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLQARCSIIAAANPNGGRYNST Sbjct: 601 KGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLQARCSIIAAANPNGGRYNST 660 Query: 661 LPLAQNVSLTEPILSRFDILCVVRDLVDEEADERLATFVVDSHVRSHPENDEDREGEELK 720 LPLAQNVSLTEPILSRFDILCVVRDLVDEEADERLATFVVDSHVRSHPENDEDREGEELK Sbjct: 661 LPLAQNVSLTEPILSRFDILCVVRDLVDEEADERLATFVVDSHVRSHPENDEDREGEELK 720 Query: 721 NNGESAIEQGEDEINEQLNARQRRLQRQRKKEEEISPIPQELLMKYIHYARTKIYPKLHQ 780 NNGESAIEQGEDEINEQLNARQRRLQRQRKKEEEISPIPQELLMKYIHYARTKIYPKLHQ Sbjct: 721 NNGESAIEQGEDEINEQLNARQRRLQRQRKKEEEISPIPQELLMKYIHYARTKIYPKLHQ 780 Query: 781 MDMDKVSRVYADLRRESISTGSFPITVRHLESILRIAESFAKMRLSEFVSSYDLDRAIKV 840 MDMDKVSRVYADLRRESISTGSFPITVRHLESILRIAESFAKMRLSEFVSSYDLDRAIKV Sbjct: 781 MDMDKVSRVYADLRRESISTGSFPITVRHLESILRIAESFAKMRLSEFVSSYDLDRAIKV 840 Query: 841 VVDSFVDAQKVSVRRQLRRSFAIYTLGH 868 VVDSFVDAQKVSVRRQLRRSFAIYTLGH Sbjct: 841 VVDSFVDAQKVSVRRQLRRSFAIYTLGH 868 >4R7Y-A nrPDB Length = 613 Score = 758 bits (1957), Expect = 0.0, Method: Composition-based stats. Identities = 216/652 (33%), Positives = 347/652 (53%), Gaps = 70/652 (10%) Query: 209 RELKSFLLEYTDETGRSVYGARIRTLGEMNSESLEVNYRHLAESKAILALFLAKCPEEML 268 FL + ++ Y RI L +SL + + + LA + + +L Sbjct: 13 DVFIEFLTTFKGNNNQNKYIERINELVAYRKKSLIIEFSDVLSFNENLAYEIINNTKIIL 72 Query: 269 KIFDLVAMEATELHYPDYARIHSEIHVRISDFPTIYSLRELRESNLSSLVRVTGVVTRRT 328 I + + P Y R ++HVRI P + LR++R +++ L+ + G++ + T Sbjct: 73 PILEGALYDHILQLDPTYQRDIEKVHVRIVGIPRVIELRKIRSTDIGKLITIDGILVKVT 132 Query: 329 GVFPQL-----KYVKFNCLKCGSILGPFFQDSNEEIRIS-FCTNCKSKGPFRVNGEKTVY 382 V ++ K++ +C++ P ++ E + + C C G FR+ EKT Sbjct: 133 PVKERIYKATYKHIHPDCMQ--EFEWPEDEEMPEVLEMPTICPKCGKPGQFRLIPEKTKL 190 Query: 383 RNYQRVTLQEAPGTVPPGRLPRHREVILLADLVDVSKPGEEVEVTGIYKNNYDGNLNAKN 442 ++Q+ +QE P VP G+LPR E+IL DLVD ++PG+ V+VTGI D + + Sbjct: 191 IDWQKAVIQERPEEVPSGQLPRQLEIILEDDLVDSARPGDRVKVTGILDIKQDSPVK-RG 249 Query: 443 GFPVFATIIEANSIKRREGNTANEGEEGLDVFSWTEEEEREFRKISRDRGIIDKIISSMA 502 VF ++ +SI+ ++ L + EEE+ +++++ + I+D I+ S+A Sbjct: 250 SRAVFDIYMKVSSIEV--------SQKVLQELEISPEEEQIIKELAKRKDIVDAIVDSIA 301 Query: 503 PSIYGHRDIKTAVACSLFGGVPKNVNGKHSIRGDINVLLLGDPGTAKSQILKYVEKTAHR 562 P+IYG++++K +A +LFGGV + + +RGDI+VLL+GDPG AKSQIL+YV A R Sbjct: 302 PAIYGYKEVKKGIALALFGGVSRKLPDGTRLRGDIHVLLVGDPGVAKSQILRYVANLAPR 361 Query: 563 AVFATGQGASAVGLTASVRKDPITKEWTLEGGALVLADKGVCLIDEFDKMNDQDRTSIHE 622 A++ +G+ +SA GLTA+ +D T W LE GALVLAD G LIDE DKM+D+DR+ IHE Sbjct: 362 AIYTSGKSSSAAGLTAAAVRDEFTGGWVLEAGALVLADGGYALIDELDKMSDRDRSVIHE 421 Query: 623 AMEQQSISISKAGIVTTLQARCSIIAAANPNGGRYNSTLPLAQNVSLTEPILSRFDILCV 682 A+EQQ+ISISKAGI TL AR ++IAAANP GR+N + + L +LSRFD++ V Sbjct: 422 ALEQQTISISKAGITATLNARTTVIAAANPKQGRFNRMKNPFEQIDLPPTLLSRFDLIFV 481 Query: 683 VRDLVDEEADERLATFVVDSHVRSHPENDEDREGEELKNNGESAIEQGEDEINEQLNARQ 742 + D D++ D +A ++ Sbjct: 482 LIDEPDDKIDSEVARHIL------------------------------------------ 499 Query: 743 RRLQRQRKKEEEISP-IPQELLMKYIHYARTKIYPKLHQMDMDKVSRVYADLRRESISTG 801 + +R + E ++P IP E+L KYI YAR I+P + + M+++ + Y +R+ T Sbjct: 500 ---RVRRGESEVVAPKIPHEILRKYIAYARKNIHPVISEEAMEEIEKYYVRMRKSVKKTK 556 Query: 802 S-------FPITVRHLESILRIAESFAKMRLSEFVSSYDLDRAIKVVVDSFV 846 PIT R LE+++R++E+ A+MRLS V+ D AIK++ + Sbjct: 557 GEEEGIPPIPITARQLEALIRLSEAHARMRLSPIVTREDAREAIKLMEYTLK 608 >3F9V-A nrPDB Length = 595 Score = 733 bits (1893), Expect = 0.0, Method: Composition-based stats. Identities = 224/642 (34%), Positives = 355/642 (55%), Gaps = 67/642 (10%) Query: 209 RELKSFLLEYTDETGRSVYGARIRTLGEMNSESLEVNYRHLAESKAILALFLAKCPEEML 268 FL + ++ Y RI L +SL + + + LA + + +L Sbjct: 6 DVFIEFLTTFKGNNNQNKYIERINELVAYRKKSLIIEFSDVLSFNENLAYEIINNTKIIL 65 Query: 269 KIFDLVAMEATELHYPDYARIHSEIHVRISDFPTIYSLRELRESNLSSLVRVTGVVTRRT 328 I + + P Y R ++HVRI P + LR++R +++ L+ + G++ + T Sbjct: 66 PILEGALYDHILQLDPTYQRDIEKVHVRIVGIPRVIELRKIRSTDIGKLITIDGILVKVT 125 Query: 329 GVFPQL-----KYVKFNCLKCGSILGPFFQDSNEEIRIS-FCTNCKSKGPFRVNGEKTVY 382 V ++ K++ +C++ P ++ E + + C C G FR+ EKT Sbjct: 126 PVKERIYKATYKHIHPDCMQ--EFEWPEDEEMPEVLEMPTICPKCGKPGQFRLIPEKTKL 183 Query: 383 RNYQRVTLQEAPGTVPPGRLPRHREVILLADLVDVSKPGEEVEVTGIYKNNYDGNLNAKN 442 ++Q+ +QE P VP G+LPR E+IL DLVD ++PG+ V+VTGI D + + Sbjct: 184 IDWQKAVIQERPEEVPSGQLPRQLEIILEDDLVDSARPGDRVKVTGILDIKQDSPVK-RG 242 Query: 443 GFPVFATIIEANSIKRREGNTANEGEEGLDVFSWTEEEEREFRKISRDRGIIDKIISSMA 502 VF ++ +SI+ ++ LD +EE+E++ + +++D I D+IISS+A Sbjct: 243 SRAVFDIYMKVSSIEV--------SQKVLDEVIISEEDEKKIKDLAKDPWIRDRIISSIA 294 Query: 503 PSIYGHRDIKTAVACSLFGGVPKNVNGKHSIRGDINVLLLGDPGTAKSQILKYVEKTAHR 562 PSIYGH ++K A+A +LFGGVPK + IRGDI++L++GDPGTAKSQ+L+++ + A R Sbjct: 295 PSIYGHWELKEALALALFGGVPKVLED-TRIRGDIHILIIGDPGTAKSQMLQFISRVAPR 353 Query: 563 AVFATGQGASAVGLTASVRKDPITKEWTLEGGALVLADKGVCLIDEFDKMNDQDRTSIHE 622 AV+ TG+G++A GLTA+V ++ T E+ LE GALVLAD G+ +IDE DKM D+DR +IHE Sbjct: 354 AVYTTGKGSTAAGLTAAVVREKGTGEYYLEAGALVLADGGIAVIDEIDKMRDEDRVAIHE 413 Query: 623 AMEQQSISISKAGIVTTLQARCSIIAAANPNGGRYNSTLPLAQNVSLTEPILSRFDILCV 682 AMEQQ++SI+KAGIV L AR ++IAA NP GRY S P++ N++L ILSRFD++ + Sbjct: 414 AMEQQTVSIAKAGIVAKLNARAAVIAAGNPKFGRYISERPVSDNINLPPTILSRFDLIFI 473 Query: 683 VRDLVDEEADERLATFVVDSHVRSHPENDEDREGEELKNNGESAIEQGEDEINEQLNARQ 742 ++D E+ D LA +++D H G+ KN Sbjct: 474 LKDQPGEQ-DRELANYILDVH-----------SGKSTKNI-------------------- 501 Query: 743 RRLQRQRKKEEEISPIPQELLMKYIHYARTKIYPKLHQMDMDKVSRVYADLRRESISTGS 802 I + L KYI YAR + PK+ + ++ + ++R++S T Sbjct: 502 ---------------IDIDTLRKYIAYARKYVTPKITSEAKNLITDFFVEMRKKSSETPD 546 Query: 803 FP--ITVRHLESILRIAESFAKMRLSEFVSSYDLDRAIKVVV 842 P IT R LE+++RI+E++AKM L V+ D +RAI ++ Sbjct: 547 SPILITPRQLEALIRISEAYAKMALKAEVTREDAERAINIMR 588 >4FDG-B nrPDB Length = 692 Score = 730 bits (1885), Expect = 0.0, Method: Composition-based stats. Identities = 224/642 (34%), Positives = 355/642 (55%), Gaps = 67/642 (10%) Query: 209 RELKSFLLEYTDETGRSVYGARIRTLGEMNSESLEVNYRHLAESKAILALFLAKCPEEML 268 FL + ++ Y RI L +SL + + + LA + + +L Sbjct: 18 DVFIEFLTTFKGNNNQNKYIERINELVAYRKKSLIIEFSDVLSFNENLAYEIINNTKIIL 77 Query: 269 KIFDLVAMEATELHYPDYARIHSEIHVRISDFPTIYSLRELRESNLSSLVRVTGVVTRRT 328 I + + P Y R ++HVRI P + LR++R +++ L+ + G++ + T Sbjct: 78 PILEGALYDHILQLDPTYQRDIEKVHVRIVGIPRVIELRKIRSTDIGKLITIDGILVKVT 137 Query: 329 GVFPQL-----KYVKFNCLKCGSILGPFFQDSNEEIRIS-FCTNCKSKGPFRVNGEKTVY 382 V ++ K++ +C++ P ++ E + + C C G FR+ EKT Sbjct: 138 PVKERIYKATYKHIHPDCMQ--EFEWPEDEEMPEVLEMPTICPKCGKPGQFRLIPEKTKL 195 Query: 383 RNYQRVTLQEAPGTVPPGRLPRHREVILLADLVDVSKPGEEVEVTGIYKNNYDGNLNAKN 442 ++Q+ +QE P VP G+LPR E+IL DLVD ++PG+ V+VTGI D + + Sbjct: 196 IDWQKAVIQERPEEVPSGQLPRQLEIILEDDLVDSARPGDRVKVTGILDIKQDSPVK-RG 254 Query: 443 GFPVFATIIEANSIKRREGNTANEGEEGLDVFSWTEEEEREFRKISRDRGIIDKIISSMA 502 VF ++ +SI+ ++ LD +EE+E++ + +++D I D+IISS+A Sbjct: 255 SRAVFDIYMKVSSIEV--------SQKVLDEVIISEEDEKKIKDLAKDPWIRDRIISSIA 306 Query: 503 PSIYGHRDIKTAVACSLFGGVPKNVNGKHSIRGDINVLLLGDPGTAKSQILKYVEKTAHR 562 PSIYGH ++K A+A +LFGGVPK + IRGDI++L++GDPGTAKSQ+L+++ + A R Sbjct: 307 PSIYGHWELKEALALALFGGVPKVLED-TRIRGDIHILIIGDPGTAKSQMLQFISRVAPR 365 Query: 563 AVFATGQGASAVGLTASVRKDPITKEWTLEGGALVLADKGVCLIDEFDKMNDQDRTSIHE 622 AV+ TG+G++A GLTA+V ++ T E+ LE GALVLAD G+ +IDE DKM D+DR +IHE Sbjct: 366 AVYTTGKGSTAAGLTAAVVREKGTGEYYLEAGALVLADGGIAVIDEIDKMRDEDRVAIHE 425 Query: 623 AMEQQSISISKAGIVTTLQARCSIIAAANPNGGRYNSTLPLAQNVSLTEPILSRFDILCV 682 AMEQQ++SI+KAGIV L AR ++IAA NP GRY S P++ N++L ILSRFD++ + Sbjct: 426 AMEQQTVSIAKAGIVAKLNARAAVIAAGNPKFGRYISERPVSDNINLPPTILSRFDLIFI 485 Query: 683 VRDLVDEEADERLATFVVDSHVRSHPENDEDREGEELKNNGESAIEQGEDEINEQLNARQ 742 ++D E+ D LA +++D H G+ KN Sbjct: 486 LKDQPGEQ-DRELANYILDVH-----------SGKSTKNI-------------------- 513 Query: 743 RRLQRQRKKEEEISPIPQELLMKYIHYARTKIYPKLHQMDMDKVSRVYADLRRESISTGS 802 I + L KYI YAR + PK+ + ++ + ++R++S T Sbjct: 514 ---------------IDIDTLRKYIAYARKYVTPKITSEAKNLITDFFVEMRKKSSETPD 558 Query: 803 FP--ITVRHLESILRIAESFAKMRLSEFVSSYDLDRAIKVVV 842 P IT R LE+++RI+E++AKM L V+ D +RAI ++ Sbjct: 559 SPILITPRQLEALIRISEAYAKMALKAEVTREDAERAINIMR 600 >3JC6-4 nrPDB Length = 933 Score = 660 bits (1703), Expect = 0.0, Method: Composition-based stats. Identities = 210/677 (31%), Positives = 337/677 (49%), Gaps = 81/677 (11%) Query: 205 RTIARELKSFLLEYTDETGRSVYGARIRTLGEMNSESLEVNYRHLAESKAILALF--LAK 262 R I E + F+ TDE Y ++ + E+ + +L ++ R+L K L+ L Sbjct: 206 RKILDEREEFINNTTDE--ELYYIKQLNEMRELGTSNLNLDARNLLAYKQTEDLYHQLLN 263 Query: 263 CPEEMLKIFDLVAMEAT------ELHYPDYARIHSEIH-VRISDFPTIYSLRELRESNLS 315 P+E++ I D + D I ++ + VR + + +REL +++ Sbjct: 264 YPQEVISIMDQTIKDCMVSLIVDNNLDYDLDEIETKFYKVRPYNVGSCKGMRELNPNDID 323 Query: 316 SLVRVTGVVTRRTGVFPQLKYVKFNCLKCGSILG-----PFFQDSNEEIRISFCTNCKSK 370 L+ + G+V R T V P +K F C C + Q+ RI +C Sbjct: 324 KLINLKGLVLRSTPVIPDMKVAFFKCNVCDHTMAVEIDRGVIQEPARCERI----DCNEP 379 Query: 371 GPFRVNGEKTVYRNYQRVTLQEAPGTVPPGRLPRHREVILLADLVDVSKPGEEVEVTGIY 430 + + + + Q + LQE P VP G+ P + + +LVD + G+ +EVTG + Sbjct: 380 NSMSLIHNRCSFADKQVIKLQETPDFVPDGQTPHSISLCVYDELVDSCRAGDRIEVTGTF 439 Query: 431 KN----NYDGNLNAKNGFPVFATIIEANSI--KRREGNTANEGEEGL----------DVF 474 ++ K+ + + ++ + KR + +T+ +E + +V Sbjct: 440 RSIPIRANSRQRVLKSLYKTYVDVVHVKKVSDKRLDVDTSTIEQELMQNKVDHNEVEEVR 499 Query: 475 SWTEEEEREFRKISRDRGIIDKIISSMAPSIYGHRDIKTAVACSLFGGVPKNVNGKHSIR 534 T+++ + R+++ + + S+APSIY D+K + LFGG K R Sbjct: 500 QITDQDLAKIREVAAREDLYSLLARSIAPSIYELEDVKKGILLQLFGGTNKTFTKGGRYR 559 Query: 535 GDINVLLLGDPGTAKSQILKYVEKTAHRAVFATGQGASAVGLTASVRKDPITKEWTLEGG 594 GDIN+LL GDP T+KSQIL+YV K R V+ +G+G+SAVGLTA + +D TK+ LE G Sbjct: 560 GDINILLCGDPSTSKSQILQYVHKITPRGVYTSGKGSSAVGLTAYITRDVDTKQLVLESG 619 Query: 595 ALVLADKGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLQARCSIIAAANPNG 654 ALVL+D GVC IDEFDKM+D R+ +HE MEQQ+ISI+KAGI+TTL AR SI+A+ANP G Sbjct: 620 ALVLSDGGVCCIDEFDKMSDSTRSVLHEVMEQQTISIAKAGIITTLNARSSILASANPIG 679 Query: 655 GRYNSTLPLAQNVSLTEPILSRFDILCVVRDLVDEEADERLATFVVDSHVRSHPENDEDR 714 RYN LP+ +N+ L P+LSRFD++ +V D VDE+ D LA + + ++ PE+ Sbjct: 680 SRYNPNLPVTENIDLPPPLLSRFDLVYLVLDKVDEKNDRELAKHLTNLYLEDKPEH---- 735 Query: 715 EGEELKNNGESAIEQGEDEINEQLNARQRRLQRQRKKEEEISPIPQELLMKYIHYARTKI 774 +D++ +P E L YI YA+ I Sbjct: 736 --------------ISQDDV-----------------------LPVEFLTMYISYAKEHI 758 Query: 775 YPKLHQMDMDKVSRVYADLRRESISTGS----FPITVRHLESILRIAESFAKMRLSEFVS 830 +P + + ++ R Y +R+ + S T R LES++R+AE+ AKM+L V Sbjct: 759 HPIITEAAKTELVRAYVGMRKMGDDSRSDEKRITATTRQLESMIRLAEAHAKMKLKNVVE 818 Query: 831 SYDLDRAIKVVVDSFVD 847 D+ A++++ + D Sbjct: 819 LEDVQEAVRLIRSAIKD 835 >5BK4-5 nrPDB Length = 775 Score = 651 bits (1679), Expect = 0.0, Method: Composition-based stats. Identities = 228/705 (32%), Positives = 346/705 (49%), Gaps = 101/705 (14%) Query: 206 TIARELKSFLLEYTDETGRSVYGARIRTLGEMNSESLEVNYRHLAESKAILALFLAKCPE 265 I + K+F+LE+ ++ + +Y ++R + + SL VN HL + L+ P Sbjct: 26 EIIKSFKNFILEFRLDS-QFIYRDQLRNNILVKNYSLTVNMEHLIGYNEDIYKKLSDEPS 84 Query: 266 EMLKIFDLVAMEATELHYPDYARIHSEIH--------------VRISDFPTI-------- 303 +++ +F+ A+ +R S + + ++ PT Sbjct: 85 DIIPLFE-TAITQVAKRISILSRAQSANNNDKDPENTSMDTDSLLLNSLPTFQLILNSNA 143 Query: 304 --YSLRELRESNLSSLVRVTGVVTRRTGVFPQLKYVKFNCLKCGSILGPFFQDSNEEI-- 359 LR+L ++S +VR++G++ + + + Y+ C C + N Sbjct: 144 NQIPLRDLDSEHVSKIVRLSGIIISTSVLSSRATYLSIMCRNCRHTTSITINNFNSITGN 203 Query: 360 RISFCTNCKS------------------------KGPFRVNGEKTVYRNYQRVTLQEAPG 395 +S +C S P+ + E + + + Q + LQE P Sbjct: 204 TVSLPRSCLSTIESESSMANESNIGDESTKKNCGPDPYIIIHESSKFIDQQFLKLQEIPE 263 Query: 396 TVPPGRLPRHREVILLADLVDVSKPGEEVEVTGIYKN----NYDGNLNAKNGFPVFATII 451 VP G +PR+ + L + PG V + GIY N G+ + G I Sbjct: 264 LVPVGEMPRNLTMTCDRYLTNKVIPGTRVTIVGIYSIYNSKNGAGSGRSGGGNGGSGVAI 323 Query: 452 EANSIKRREGNTANEGEEGLD-VFSWTEEEEREFRKISRDRGIIDKIISSMAPSIYGHRD 510 IK + E + V +TEEEE EF ++SR+ + + + +S+APSI+G+ D Sbjct: 324 RTPYIKILGIQSDVETSSIWNSVTMFTEEEEEEFLQLSRNPKLYEILTNSIAPSIFGNED 383 Query: 511 IKTAVACSLFGGVPKNVNGKHSIRGDINVLLLGDPGTAKSQILKYVEKTAHRAVFATGQG 570 IK A+ C L GG K + +RGDINVLLLGDPGTAKSQ+LK+VEK + AV+ +G+G Sbjct: 384 IKKAIVCLLMGGSKKILPDGMRLRGDINVLLLGDPGTAKSQLLKFVEKVSPIAVYTSGKG 443 Query: 571 ASAVGLTASVRKDPITKEWTLEGGALVLADKGVCLIDEFDKMNDQDRTSIHEAMEQQSIS 630 +SA GLTASV++DP+T+E+ LEGGA+VLAD GV IDEFDKM D+DR +IHEAMEQQ+IS Sbjct: 444 SSAAGLTASVQRDPMTREFYLEGGAMVLADGGVVCIDEFDKMRDEDRVAIHEAMEQQTIS 503 Query: 631 ISKAGIVTTLQARCSIIAAANPNGGRYNSTLPLAQNVSLTEPILSRFDILCVVRDLVDEE 690 I+KAGI T L +R S++AAANP GRY+ N+ ILSRFD++ +V+D +EE Sbjct: 504 IAKAGITTVLNSRTSVLAAANPIYGRYDDLKSPGDNIDFQTTILSRFDMIFIVKDDHNEE 563 Query: 691 ADERLATFVVDSHVRSHPENDEDREGEELKNNGESAIEQGEDEINEQLNARQRRLQRQRK 750 D +A V++ H + Q + Sbjct: 564 RDISIANHVINIHTGN-------------------------------------ANAMQNQ 586 Query: 751 KEEEISPIPQELLMKYIHYARTKIYPKLHQMDMDKVSRVYADLRR-------ESISTGSF 803 +EE S I E + +YI Y R K P+L +K+S + +R+ ES S Sbjct: 587 QEENGSEISIEKMKRYITYCRLKCAPRLSPQAAEKLSSNFVTIRKQLLINELESTERSSI 646 Query: 804 PITVRHLESILRIAESFAKMRLSEFVSSYDLDRAIKVVVDSFVDA 848 PIT+R LE+I+RI ES AK+ LS +D AI++ S +DA Sbjct: 647 PITIRQLEAIIRITESLAKLELSPIAQERHVDEAIRLFQASTMDA 691 >5XF8-3 nrPDB Length = 997 Score = 579 bits (1492), Expect = e-165, Method: Composition-based stats. Identities = 222/652 (34%), Positives = 337/652 (51%), Gaps = 56/652 (8%) Query: 242 LEVNYRHLAESKAILALFLAKCPEEMLKIFDLVAMEATELHY----PDYARIHSEIHVRI 297 + ++ L E + P + + + + P+ + + S ++ Sbjct: 122 IIISLDDLREFDRSFWSGILVEPAYFIPPAEKALTDLADSMDDVPHPNASAVSSRHPWKL 181 Query: 298 SDFPTI----YSLRELRESNLSSLVRVTGVVTRRTGVFPQLKYVKFNCLKCGSILGPFFQ 353 S + S R L +L+ LV V G+VT+ + V P+L K G + Sbjct: 182 SFKGSFGAHALSPRTLTAQHLNKLVSVEGIVTKTSLVRPKLIRSVHYAAKTGRFHYRDYT 241 Query: 354 DSNEEI--RIS----FCTNCKSKGPFRVNGEKTVYRNYQRVTLQEAPGTVPPGRLPRHRE 407 D+ + RI + T + + ++QR+T+QE P P G+LPR + Sbjct: 242 DATTTLTTRIPTPAIYPTEDTEGNKLTTEYGYSTFIDHQRITVQEMPEMAPAGQLPRSID 301 Query: 408 VILLADLVDVSKPGEEVEVTGIYKNNYDGNLNAKNGFPV--FATIIEANSI----KRREG 461 VIL DLVD +KPG+ V V G++K+ G +N N + F T+I N++ R G Sbjct: 302 VILDDDLVDKTKPGDRVNVVGVFKSLGAGGMNQSNSNTLIGFKTLILGNTVYPLHARSTG 361 Query: 462 NTANEGEEGLDVFSWTEEEEREFRKISRDRGIIDKIISSMAPSIYGHRDIKTAVACSLFG 521 A + D+ R K+S+ + I D + S+APSIYGH IK A+ L G Sbjct: 362 VAARQMLTDFDI--------RNINKLSKKKDIFDILSQSLAPSIYGHDHIKKAILLMLMG 413 Query: 522 GVPKNVNGKHSIRGDINVLLLGDPGTAKSQILKYVEKTAHRAVFATGQGASAVGLTASVR 581 GV KN+ +RGDIN+L++GDP TAKSQ+L++V TA A+ TG+G+S VGLTA+V Sbjct: 414 GVEKNLENGSHLRGDINILMVGDPSTAKSQLLRFVLNTASLAIATTGRGSSGVGLTAAVT 473 Query: 582 KDPITKEWTLEGGALVLADKGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLQ 641 D T E LE GA+VLAD+GV IDEFDKM D DR +IHE MEQQ+++I+KAGI TTL Sbjct: 474 TDRETGERRLEAGAMVLADRGVVCIDEFDKMTDVDRVAIHEVMEQQTVTIAKAGIHTTLN 533 Query: 642 ARCSIIAAANPNGGRYNSTLPLAQNVSLTEPILSRFDILCVVRDLVDEEADERLATFVVD 701 ARCS+IAAANP G+Y+ QN++L + +LSRFD+L VV D ++E D ++ V+ Sbjct: 534 ARCSVIAAANPVFGQYDVNRDPHQNIALPDSLLSRFDLLFVVTDDINEIRDRSISEHVLR 593 Query: 702 SHVRSHP------------------ENDEDREGEELKNNGESAIEQGEDE---INEQLNA 740 +H P D D EE N+G +GED+ + E+ N Sbjct: 594 THRYLPPGYLEGEPVRERLNLSLAVGEDADINPEEHSNSGAGVENEGEDDEDHVFEKFNP 653 Query: 741 RQRRLQRQRKKEEEI--SPIP----QELLMKYIHYARTKIYPKLHQMDMDKVSRVYADLR 794 + + K + + IP L KY+ YA+ ++ P+L Q ++ + + Y DLR Sbjct: 654 LLQAGAKLAKNKGNYNGTEIPKLVTIPFLRKYVQYAKERVIPQLTQEAINVIVKNYTDLR 713 Query: 795 RESISTGSFPITVRHLESILRIAESFAKMRLSEFVSSYDLDRAIKVVVDSFV 846 + +T PIT R LE+++R+A + AK+RLS+ V+ D A ++ + + Sbjct: 714 ND-DNTKKSPITARTLETLIRLATAHAKVRLSKTVNKVDAKVAANLLRFALL 764 >5U8S-7 nrPDB Length = 845 Score = 533 bits (1373), Expect = e-151, Method: Composition-based stats. Identities = 211/635 (33%), Positives = 325/635 (51%), Gaps = 76/635 (11%) Query: 229 ARIRTLGEMNSESLEVNYRHLAESKAILALFLAKCPEEMLKIFDLVAMEATELHYPDYAR 288 R+R ++ + E+ +L ++ + E+++ + Y Y + Sbjct: 146 RRLRNERMLSDRTNEIRSENLMDTTMDPPSSMNDALREVVEDETELFPPNLTRRYFLYFK 205 Query: 289 IHSEIHVRISDFPTI----YSLRELRESNLSSLVRVTGVVTRRTGVFPQLKYVKFNCLKC 344 S+ R I S+R+++ L L+ V G++TR + V P ++ + + C +C Sbjct: 206 PLSQNCARRYRKKAISSKPLSVRQIKGDFLGQLITVRGIITRVSDVKPAVEVIAYTCDQC 265 Query: 345 G---------SILGPFFQDSNEEIRISFCTNCKSKGPFRVNGEKTVYRNYQRVTLQEAPG 395 G P + ++EE C+ ++KG ++ + + +Q +QE Sbjct: 266 GYEVFQEVNSRTFTPLSECTSEE-----CSQNQTKGQLFMSTRASKFSAFQECKIQELSQ 320 Query: 396 TVPPGRLPRHREVILLADLVDVSKPGEEVEVTGIY-KNNYDGNLNAKNGFPVFATIIEAN 454 VP G +PR + + LV PG+ V+VTGI+ Y G K G + T +EA Sbjct: 321 QVPVGHIPRSLNIHVNGTLVRSLSPGDIVDVTGIFLPAPYTGFKALKAGL-LTETYLEAQ 379 Query: 455 SIKRREGNTANEGEEGLDVFSWTEEEEREFRKISRDRGIIDKIISSMAPSIYGHRDIKTA 514 +++ + A+ FS T + E ++ + +++ S+AP IYG+ D+K A Sbjct: 380 FVRQHKKKFAS--------FSLTSDVEERVMELITSGDVYNRLAKSIAPEIYGNLDVKKA 431 Query: 515 VACSLFGGVPKNVNGKHSIRGDINVLLLGDPGTAKSQILKYVEKTAHRAVFATGQGASAV 574 + L GGV K V IRGDINV L+GDPG AKSQ+LK + K + R V+ TG+G+S V Sbjct: 432 LLLLLVGGVDKRVGDGMKIRGDINVCLMGDPGVAKSQLLKAICKISPRGVYTTGKGSSGV 491 Query: 575 GLTASVRKDPITKEWTLEGGALVLADKGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKA 634 GLTA+V KDP+T E LEGGALVLAD G+C IDEFDKM++ DRT+IHE MEQQ+ISISKA Sbjct: 492 GLTAAVMKDPVTDEMILEGGALVLADNGICCIDEFDKMDESDRTAIHEVMEQQTISISKA 551 Query: 635 GIVTTLQARCSIIAAANPNGGRYNSTLPLAQNVSLTEPILSRFDILCVVRDLVDEEADER 694 GI TTL AR SI+AAANP GRYN L N++L +LSRFDIL ++ D+ + DE+ Sbjct: 552 GINTTLNARTSILAAANPLYGRYNPRLSPLDNINLPAALLSRFDILFLMLDIPSRDDDEK 611 Query: 695 LATFVVDSHVRSHPENDEDREGEELKNNGESAIEQGEDEINEQLNARQRRLQRQRKKEEE 754 LA V H+ + ++ + + Sbjct: 612 LAEHVTYVHMHN------------------------------------------KQPDLD 629 Query: 755 ISPIPQELLMKYIHYARTKIYPKLHQMDMDKVSRVYADLR----RESISTGSF-PITVRH 809 +P+ + +YI YA+TK P + + D V + Y LR RE S SF T R Sbjct: 630 FTPVEPSKMREYIAYAKTK-RPVMSEAVNDYVVQAYIRLRQDSKREMDSKFSFGQATPRT 688 Query: 810 LESILRIAESFAKMRLSEFVSSYDLDRAIKVVVDS 844 L I+R++++ AK+RL++ V D++ A+++V S Sbjct: 689 LLGIIRLSQALAKLRLADMVDIDDVEEALRLVRVS 723 >4R7Z-A nrPDB Length = 338 Score = 382 bits (981), Expect = e-106, Method: Composition-based stats. Identities = 128/378 (33%), Positives = 200/378 (52%), Gaps = 53/378 (14%) Query: 477 TEEEEREFRKISRDRGIIDKIISSMAPSIYGHRDIKTAVACSLFGGVPKNVNGKHSIRGD 536 + EEE+ +++++ + I+D I+ S+AP+IYG++++K +A +LFGGV + + +RGD Sbjct: 1 SPEEEQIIKELAKRKDIVDAIVDSIAPAIYGYKEVKKGIALALFGGVSRKLPDGTRLRGD 60 Query: 537 INVLLLGDPGTAKSQILKYVEKTAHRAVFATGQGASAVGLTASVRKDPITKEWTLEGGAL 596 I+VLL+GDPG AKSQIL+YV A RA++ + Sbjct: 61 IHVLLVGDPGVAKSQILRYVANLAPRAIYTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120 Query: 597 VLADKGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLQARCSIIAAANPNGGR 656 G LIDE DKM+D+DR+ IHEA+EQQ+ISISKAGI TL AR ++IAAANP GR Sbjct: 121 XXXXGGYALIDELDKMSDRDRSVIHEALEQQTISISKAGITATLNARTTVIAAANPKQGR 180 Query: 657 YNSTLPLAQNVSLTEPILSRFDILCVVRDLVDEEADERLATFVVDSHVRSHPENDEDREG 716 +N + + L +LSRFD++ V+ D D++ D +A ++ Sbjct: 181 FNRMKNPFEQIDLPPTLLSRFDLIFVLIDEPDDKIDSEVARHIL---------------- 224 Query: 717 EELKNNGESAIEQGEDEINEQLNARQRRLQRQRKKEEEISP-IPQELLMKYIHYARTKIY 775 + +R + E ++P IP E+L KYI YAR I+ Sbjct: 225 -----------------------------RVRRGESEVVAPKIPHEILRKYIAYARKNIH 255 Query: 776 PKLHQMDMDKVSRVYADLRRESISTGS-------FPITVRHLESILRIAESFAKMRLSEF 828 P + + M+++ + Y +R+ T PIT R LE+++R++E+ A+MRLS Sbjct: 256 PVISEEAMEEIEKYYVRMRKSVKKTKGEEEGIPPIPITARQLEALIRLSEAHARMRLSPI 315 Query: 829 VSSYDLDRAIKVVVDSFV 846 V+ D AIK++ + Sbjct: 316 VTREDAREAIKLMEYTLK 333 >3F8T-A nrPDB Length = 506 Score = 235 bits (599), Expect = 7e-62, Method: Composition-based stats. Identities = 109/468 (23%), Positives = 189/468 (40%), Gaps = 88/468 (18%) Query: 403 PRHREVILLADLVDVSKPGEEVEVTGIYKNNYDGNLNAKNGFPVFATIIEANSIKRREGN 462 P +I + +V + E +E + + + +E I R Sbjct: 113 PMDGALISIEGVVREVRGAERLEHAIVDTGSELVAVRLHGHRLGPGLRVEILGIVRSATL 172 Query: 463 TANEGEEGLDVFSWTEE--EEREFRKISRDRGIIDKIISSMAPSIYGHRDIKTAVACSLF 520 A E + + + E EFR+++ D+ + ++AP + G ++ +A LF Sbjct: 173 DALEVHKKDPIPEVHPDPAELEEFRELA-DKDPLTTFARAIAP-LPGAEEVGKMLALQLF 230 Query: 521 GGVPKNVNGKHSIRGDINVLLLGDPGTAKSQILKYV-EKTAHRAVFATGQGASAVGLTAS 579 V KN ++VLL G P S+IL +V + A R V+ + LTA Sbjct: 231 SCVGKNSER-------LHVLLAGYP-VVCSEILHHVLDHLAPRGVYVDLRRTELTDLTAV 282 Query: 580 VRKDPITKEWTLEGGALVLADKGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTT 639 +++D + W L GA VLAD G+ +D + + R ++ EAM++ ++++ GI Sbjct: 283 LKED---RGWALRAGAAVLADGGILAVDHLEGAPEPHRWALMEAMDKGTVTVD--GI--A 335 Query: 640 LQARCSIIAAANPNGGRYNSTLPLAQNVSLTEPILSRFDILCVVRDLVDEEADERLATFV 699 L ARC+++AA NP G ++ S P+A R D+ D+ + Sbjct: 336 LNARCAVLAAINP-GEQWPSDPPIA-----------RIDL------------DQDFLSHF 371 Query: 700 VDSHVRSHPENDEDREGEELKNNGESAIEQGEDEINEQLNARQRRLQRQRKKEEEISPIP 759 L A R + EE+ + +P Sbjct: 372 -------------------------------------DLIAFLGVDPRPGEPEEQDTEVP 394 Query: 760 -QELLMKYIHYA-RTKIYPKLHQMDMDKVSRVYADLRRESIST-----GSFPITVRHLES 812 LL +Y+ YA R P+L + ++ Y R E + P+T R LES Sbjct: 395 SYTLLRRYLLYAIREHPAPELTEEARKRLEHWYETRREEVEERLGMGLPTLPVTRRQLES 454 Query: 813 ILRIAESFAKMRLSEFVSSYDLDRAIKVVVDSFVDAQKVSVRRQLRRS 860 + R+A++ A+MRLS+ V D+D A ++V A ++ ++R S Sbjct: 455 VERLAKAHARMRLSDDVEPEDVDIAAELVDWYLETAMQIPGGDEIRIS 502 >4QHS-A nrPDB Length = 267 Score = 40.2 bits (92), Expect = 0.004, Method: Composition-based stats. Identities = 41/203 (20%), Positives = 77/203 (37%), Gaps = 26/203 (12%) Query: 510 DIKTAVACSLFGGVPKNVNGKHSIRGDINVLLLGDPGTAKSQILKYVEKTAHR--AVFAT 567 D K+ +L V K D NV++LG G+ K + +Y+ + R F Sbjct: 21 DTKSLKLLALADKVAKT---------DANVMILGPSGSGKEVMSRYIHNASPRKEGPFIA 71 Query: 568 GQGASAVG--LTASV---RKDPITKEWTLEGGALVLADKGVCLIDEFDKMNDQDRTSIHE 622 A+ L A++ K T G A G L+DE +M+ + + Sbjct: 72 INCAAIPDNMLEATLFGYEKGAFTGAVQACPGKFEQAQGGTILLDEISEMDLNLQAKLLR 131 Query: 623 AMEQQSISISKAGIVTTLQARCSIIAAANPNGGRYNSTLPLAQNVSLTEPILSRFDILCV 682 ++++ + + L R ++A +N + +Y Q E + R ++ + Sbjct: 132 VLQEREVERLGSRKSIKLDVR--VLATSNRDLKQY------VQAGHFREDLYYRLNVFPL 183 Query: 683 VRDLVDEEAD--ERLATFVVDSH 703 + E D E LA +++ H Sbjct: 184 TWPALCERKDDIEPLANHLIERH 206 >5EXS-A nrPDB Length = 260 Score = 39.4 bits (90), Expect = 0.007, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 50/136 (36%), Gaps = 17/136 (12%) Query: 536 DINVLLLGDPGTAKSQILKYVEKTAHR-----------AVFATGQGASAVGLTASVRKDP 584 D +VL+LG+ GT K + + + + R A+ A + G K Sbjct: 33 DASVLILGESGTGKEVVARNLHYHSKRREGPFVPVNCGAIPAELLESELFGH----EKGA 88 Query: 585 ITKEWTLEGGALVLADKGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLQARC 644 T T G LA+ G +DE M + + +++++ + G T Sbjct: 89 FTGAITSRAGRFELANGGTLFLDEIGDMPLPMQVKLLRVLQERT--FERVGSNKTQNVDV 146 Query: 645 SIIAAANPNGGRYNST 660 IIAA + N + Sbjct: 147 RIIAATHKNLEKMIED 162 >3JCM-G nrPDB Length = 899 Score = 38.6 bits (88), Expect = 0.012, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 86/236 (36%), Gaps = 23/236 (9%) Query: 99 REQQELSLSER-RRIDAQLNERDRLLRNVAYIDDEDEEQEGAAQLDEMGLPVQRRRRRRQ 157 +E+Q +S ++ RRI + E DDED+E + E+ L Q++++R Sbjct: 29 KEKQVVSNDDKGRRIPKRYRENLNNHLQSQPKDDEDDEAANVFKTLELKL-AQKKKKRAN 87 Query: 158 YEDLENSDDDLLSDMDIDPLREELTLESLSNVKANSYSEWITQPNVSRTIARELKSFLLE 217 +D +NS D L+E L A + SEW+ P+ + Sbjct: 88 EKDDDNSVDSSNVKRQFADLKESLA--------AVTESEWMDIPDA------------TD 127 Query: 218 YTDETGRSVYGARIRTLGEMNSESLEVNYRHLAESKAILALFLAKCPEEMLKIFDLVAME 277 +T R+ ++ +SL L + L +E L A Sbjct: 128 FTRRNKRNRIQEQLNRKTYAAPDSLIPGNVDLNKLTEEREKLLQSQIDENLAQLTKNASN 187 Query: 278 ATELHYPDYARIHSEIHVRISDFPTIYSLRELRESNLSSLVRVTGVVTRRTGVFPQ 333 +++ P+ A + +++ + + SL + +L + + + PQ Sbjct: 188 PIQVNKPNAATD-ALSYLKDLENDRVNSLSDATLEDLQKMRTILKSYRKADPTNPQ 242 >5EXX-A nrPDB Length = 343 Score = 38.2 bits (87), Expect = 0.017, Method: Composition-based stats. Identities = 29/132 (21%), Positives = 50/132 (37%), Gaps = 17/132 (12%) Query: 536 DINVLLLGDPGTAKSQILKYVEKTAHR-----------AVFATGQGASAVGLTASVRKDP 584 D +VL+LG+ GT K + + + + R A+ A + G K Sbjct: 33 DASVLILGESGTGKEVVARNLHYHSKRREGPFVPVNCGAIPAELLESELFGH----EKGA 88 Query: 585 ITKEWTLEGGALVLADKGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLQARC 644 T T G LA+ G +DE M + + +++++ + G T Sbjct: 89 FTGAITSRAGRFELANGGTLFLDEIGDMPLPMQVKLLRVLQERT--FERVGSNKTQNVDV 146 Query: 645 SIIAAANPNGGR 656 IIAA + N + Sbjct: 147 RIIAATHKNLEK 158 >4ZPX-A nrPDB Length = 413 Score = 37.1 bits (84), Expect = 0.037, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 38/89 (42%), Gaps = 8/89 (8%) Query: 757 PIPQELLMKYIHYARTKI-----YPKLHQMDMDKVSRVYADLRRESISTGSFPITVRHLE 811 P E K + + ++ P + ++++ R + ++ + G + +R L Sbjct: 326 PDTIENRRKLVQFVAQEVKRDGKIPHFTKEAVEEIVR---EAQKRAGRKGHLTLRLRDLG 382 Query: 812 SILRIAESFAKMRLSEFVSSYDLDRAIKV 840 I+R A A + ++V D+ A+K+ Sbjct: 383 GIVRAAGDIAVKKGKKYVEREDVIEAVKM 411 Score = 29.4 bits (64), Expect = 7.9, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 16/24 (66%) Query: 538 NVLLLGDPGTAKSQILKYVEKTAH 561 +VLL+G+PGT KS + + + + Sbjct: 62 HVLLIGEPGTGKSMLGQAMAELLP 85 >3DZD-A nrPDB Length = 368 Score = 36.7 bits (83), Expect = 0.049, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 8/119 (6%) Query: 539 VLLLGDPGTAKSQILKYVEKTAHR-AVFATGQGASAVGLTASVR-----KDPITKEWTLE 592 VL+ G+ GT K + + + + + R F AS A K T T + Sbjct: 155 VLITGESGTGKEIVARLIHRYSGRKGAFVDLNCASIPQELAESELFGHEKGAFTGALTRK 214 Query: 593 GGALVLADKGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLQARCSIIAAAN 651 G L LAD+G +DE +++ + + + +E S + + G ++ +I+A N Sbjct: 215 KGKLELADQGTLFLDEVGELDQRVQAKLLRVLETGSFT--RLGGNQKIEVDIRVISATN 271 >6AS7-A nrPDB Length = 922 Score = 36.7 bits (83), Expect = 0.049, Method: Composition-based stats. Identities = 35/129 (27%), Positives = 54/129 (41%), Gaps = 20/129 (15%) Query: 132 EDEEQEGAAQLD----EMG-LP------VQRRRRRRQYEDLENSDDDLLSDMDIDPLREE 180 ED EQE +L EMG LP V+RR++ +Q ++ + DL+ DI + Sbjct: 556 EDGEQEQIPELPDPSLEMGILPREIRKLVERRKQVKQLMKQQDLNPDLILQYDIRQKALK 615 Query: 181 LTLESLSNVKANSYSEWITQPNVS------RTIARELKSFLLEYTDETGRSVYGARIRTL 234 LT S+ SYS + +P + R I K + + +YG + Sbjct: 616 LTANSMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKM---NLEVIYGDTDSIM 672 Query: 235 GEMNSESLE 243 NS +LE Sbjct: 673 INTNSTNLE 681 >1OFI-A nrPDB Length = 310 Score = 36.3 bits (82), Expect = 0.057, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 8/122 (6%) Query: 497 IISSMAPSIYGHRDIKTAVACSLFGGVPKNVNGKHSIRGDI---NVLLLGDPGTAKSQIL 553 I+S + I G D K AVA +L + + + +R ++ N+L++G G K++I Sbjct: 9 IVSELDQHIIGQADAKRAVAIALRN-RWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIA 67 Query: 554 KYVEKTAHRAVFATGQGASAVGLTASVRK-DPITKEWTLEGGALVLA--DKGVCLIDEFD 610 + + K A A F + + ++ D I ++ T G + A G+ IDE D Sbjct: 68 RRLAKLA-NAPFIKVEATKFTEVGYVGKEVDSIIRDLTDSAGGAIDAVEQNGIVFIDEID 126 Query: 611 KM 612 K+ Sbjct: 127 KI 128 >3K1J-A nrPDB Length = 604 Score = 35.9 bits (81), Expect = 0.078, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 38/89 (42%), Gaps = 8/89 (8%) Query: 757 PIPQELLMKYIHYARTKI-----YPKLHQMDMDKVSRVYADLRRESISTGSFPITVRHLE 811 P E K + + ++ P + ++++ R + ++ + G + +R L Sbjct: 289 PDTIENRRKLVQFVAQEVKRDGKIPHFTKEAVEEIVR---EAQKRAGRKGHLTLRLRDLG 345 Query: 812 SILRIAESFAKMRLSEFVSSYDLDRAIKV 840 I+R A A + ++V D+ A+K+ Sbjct: 346 GIVRAAGDIAVKKGKKYVEREDVIEAVKM 374 >5V8F-8 nrPDB Length = 604 Score = 34.8 bits (78), Expect = 0.17, Method: Composition-based stats. Identities = 23/145 (15%), Positives = 55/145 (37%), Gaps = 6/145 (4%) Query: 153 RRRRQYEDLENSDDDLLSDM---DIDPLREELTLESLSNVKANSYSEWITQPNVSRTIAR 209 R Y+ + S D++++D+ I+ R +++ + K + S N SR +A Sbjct: 406 RAESWYQQVIASKDEIMTDVPAFKINKRRSSSNSKTVLSSKVQTKSSNANALNNSRYLAN 465 Query: 210 ELKSFLLEYTDETGRSVYGARIRTLGEMNSESLEVNYRHLAESKAILALFLAKCPEEMLK 269 ++F+ + ++ R+R E S +L + + LA+ + + + + Sbjct: 466 SKENFMYKEKMPDSQANLMDRLRE-RERRSAALLSQRQK--RYQQFLAMKMTQVFDILFS 522 Query: 270 IFDLVAMEATELHYPDYARIHSEIH 294 + T L + + Sbjct: 523 LTRGQPYTETYLSSLIVDSLQDSNN 547 >6HIV-A1 nrPDB Length = 241 Score = 34.4 bits (77), Expect = 0.23, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 40/92 (43%), Gaps = 9/92 (9%) Query: 197 WITQPNVSRTIAR-----ELKSFLLEYTDETGRSVYGARIRTLGEMNSESLEVNYRHLAE 251 W+ P V + +F+L+ + RS YG RIR + + ++ N+ + + Sbjct: 117 WVQVPMVEAAMFEVEKDGGFDNFILKRSGPELRSTYGERIRRHILVRQKEIQKNF--VLQ 174 Query: 252 SKAILALFLAKCPEEMLKIFDLVAMEATELHY 283 +A + + + +E+L + D +E Y Sbjct: 175 KQAQMLVESME--KEILPMEDGKKVEEVLEKY 204 >1NY5-A nrPDB Length = 387 Score = 34.4 bits (77), Expect = 0.25, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 81/225 (36%), Gaps = 40/225 (17%) Query: 443 GFPVFATIIEANSIKRREGNTANEGEEGLDVFSWTEEEEREFRK----ISRDRGIIDKII 498 G T +EA + + T E +++ E R+ RK + R++ + ++ Sbjct: 80 GHGTIKTAVEAMKMGAYDFLTKPCMLEEIELTINKAIEHRKLRKENELLRREKDLKEEEY 139 Query: 499 SSMAPSIYGHRDIKTAVACSLFGGVPKNVNGKHSIRGDINVLLLGDPGTAKSQILKYVEK 558 +P + + ++C+ + VL+ G+ G K + + + K Sbjct: 140 VFESPKMKEILEKIKKISCA-----------------ECPVLITGESGVGKEVVARLIHK 182 Query: 559 TAHRAVFATGQGASAVGLTASVRKDPITKEWT-LEGGALV-----------LADKGVCLI 606 + R+ + AS+ +D E E GA LAD G + Sbjct: 183 LSDRS-----KEPFVALNVASIPRDIFEAELFGYEKGAFTGAVSSKEGFFELADGGTLFL 237 Query: 607 DEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLQARCSIIAAAN 651 DE +++ + + + +E + G ++ I+AA N Sbjct: 238 DEIGELSLEAQAKLLRVIESG--KFYRLGGRKEIEVNVRILAATN 280 >1IN6-A nrPDB Length = 334 Score = 33.6 bits (75), Expect = 0.40, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 55/152 (36%), Gaps = 30/152 (19%) Query: 487 ISRDRGIIDKIISSMAP----SIYGHRDIKTAVACSLFGGVPKNVNGKHSIRGDI--NVL 540 ++ +R + D + + P G ++K ++ +L +RG++ +VL Sbjct: 5 LTPERTVYDSGVQFLRPKSLDEFIGQENVKKKLSLAL---------EAAKMRGEVLDHVL 55 Query: 541 LLGDPGTAKSQILKYVEKTAHRAVF-ATGQGASAVGLTASVRKDPITKEWTLEGGALVLA 599 L G PG ++ + + + +G G A++ L Sbjct: 56 LAGPPGLGRTTLAHIIASELQTNIHVTSGPVLVKQGDMAAILTS--------------LE 101 Query: 600 DKGVCLIDEFDKMNDQDRTSIHEAMEQQSISI 631 V IDE ++N ++ A+E I I Sbjct: 102 RGDVLFIDEIHRLNKAVEELLYSAIEDFQIDI 133 >4A2W-A nrPDB Length = 936 Score = 33.6 bits (75), Expect = 0.41, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 64/184 (34%), Gaps = 41/184 (22%) Query: 112 IDAQLNERDRLLRNVAYIDDEDEEQE---GAAQLDEMGLPVQRRRRRRQYEDLENS---- 164 I ++E + L+R +AY+D + + G + + QR+ R Q ED E Sbjct: 480 ISNLMSETEALMRTIAYVDTLSQNSKKDFGTQNYEHWIVVTQRKCRLLQLEDKEEESRIC 539 Query: 165 -------------DDDLLSDMD---IDPLREELTLESLSNVKANSYSEWITQPNVSRTIA 208 +D L+ D ID L E +NVK Y+E + +++ Sbjct: 540 RALFICTEHLRKYNDALIISEDARIIDAL--SYLTEFFTNVKNGPYTE--LEQHLTAKFQ 595 Query: 209 RELKSFLLEYTDETGRS--------------VYGARIRTLGEMNSESLEVNYRHLAESKA 254 + + DET + Y + RTL + +L + E Sbjct: 596 EKEPELIALSKDETNENPKLEELVCILDDAYRYNPQTRTLLFAKTRALVSALKKCMEENP 655 Query: 255 ILAL 258 IL Sbjct: 656 ILNY 659 >6D00-1 nrPDB Length = 883 Score = 33.2 bits (74), Expect = 0.50, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 63/159 (39%), Gaps = 8/159 (5%) Query: 701 DSHVRSHPENDEDREGEELKNNGESAIEQGEDEINEQLNARQRRLQRQRKKEEEISPIPQ 760 +SHV+ HP + +E + S +E+ ++ ++ + RQ ++ + + Sbjct: 25 NSHVQLHPSHVAVVMLDEENSLFRSILEKAGGDVVSIERGFKKIMVRQPSQDPPPTEMGH 84 Query: 761 -ELLMKYIHYARTKIYPKLH-QMDMDKVSRVYADLRRESISTGSFPITVRHLESILRIAE 818 L K +HYA + + + D + ADL + +T + LE Sbjct: 85 SPELAKLLHYAHEHMKKQRDLYIAQDHLILALADLPSMAQVLKEGGVTKKSLE------N 138 Query: 819 SFAKMRLSEFVSSYDLDRAIKVVVDSFVDAQKVSVRRQL 857 + +R + V S + A + + +D +++ +L Sbjct: 139 AVTHVRGNRRVESKSAEEAYEALSKYCIDLTELAASGKL 177 >4V1O-Q nrPDB Length = 734 Score = 32.8 bits (73), Expect = 0.59, Method: Composition-based stats. Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 9/126 (7%) Query: 65 EEQMNEVDLMDDNMYE-DYAADHNRDRYDPDQVDDREQQELSLSERRRIDAQLNERDRLL 123 ++ M+E D D++ E DY + D P + D +QE SE+R L L Sbjct: 446 QQAMDEDDRDDNSEVELDYDEEFADDEEAP--IIDGNEQENKESEQRIKKEMLQANAMGL 503 Query: 124 RNV-AYIDDEDEEQEGAAQLDEMGLPVQRRRRRRQYEDLENSDDDLLSDMDIDPLREELT 182 R+ A +E++E G ++DE G +++ ++ + L +SD+D +I+P E Sbjct: 504 RDEEAPSGNEEDELFGEKKIDEDGEKIKKALQKTELAALYSSDED-----EINPYLSESD 558 Query: 183 LESLSN 188 +E+ N Sbjct: 559 IENKEN 564 >4L4U-A nrPDB Length = 447 Score = 32.8 bits (73), Expect = 0.64, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 82/225 (36%), Gaps = 40/225 (17%) Query: 443 GFPVFATIIEANSIKRREGNTANEGEEGLDVFSWTEEEEREFRK----ISRDRGIIDKII 498 G T +EA + + T E +++ E R+ RK + R++ + ++ Sbjct: 88 GHGTIKTAVEAMKMGAYDFLTKPCMLEEIELTINKAIEHRKLRKENELLRREKDLKEEEY 147 Query: 499 SSMAPSIYGHRDIKTAVACSLFGGVPKNVNGKHSIRGDINVLLLGDPGTAKSQILKYVEK 558 +P + + ++C+ + VL+ G+ G K + + + K Sbjct: 148 VFESPKMKEILEKIKKISCA-----------------ECPVLITGESGVGKEVVARLIHK 190 Query: 559 TAHRAVFATGQGASAVGLTASVRKDPITKEWT-LEGGALV-----------LADKGVCLI 606 ++ R+ + AS+ +D E E GA LAD G + Sbjct: 191 SSDRS-----KEPFVALNVASIPRDIFEAELFGYEKGAFTGAVSSKEGFFELADGGTLFL 245 Query: 607 DEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLQARCSIIAAAN 651 DE +++ + + + +E + G ++ I+AA N Sbjct: 246 DEIGELSLEAQAKLLRVIESG--KFYRLGGRKEIEVNVRILAATN 288 >4BS1-B nrPDB Length = 173 Score = 32.8 bits (73), Expect = 0.69, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 48/125 (38%), Gaps = 19/125 (15%) Query: 539 VLLLGDPGTAKSQILKYVEKTAHRAVFATGQGASAVGLTASVRKDPITKEWT-LEGGALV 597 VL+ G+ G K + + + K + R+ + AS+ +D E E GA Sbjct: 27 VLITGESGVGKEVVARLIHKLSDRS-----KEPFVALNVASIPRDIFEAELFGYEKGAFT 81 Query: 598 -----------LADKGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLQARCSI 646 LAD G +DE +++ + + + +E + G ++ I Sbjct: 82 GAVSSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESG--KFYRLGGRKEIEVNVRI 139 Query: 647 IAAAN 651 +AA N Sbjct: 140 LAATN 144 >2R44-A nrPDB Length = 331 Score = 32.5 bits (72), Expect = 0.81, Method: Composition-based stats. Identities = 34/171 (19%), Positives = 70/171 (40%), Gaps = 24/171 (14%) Query: 538 NVLLLGDPGTAKSQILKYVEKTA----HRAVFATGQGASAVGLTASVRKDPITKEWTLEG 593 ++LL G PG AK+ + + KT HR F S L ++ + + ++ Sbjct: 48 HILLEGVPGLAKTLSVNTLAKTMDLDFHRIQFTPDLLPS--DLIGTMIYNQHKGNFEVKK 105 Query: 594 GALVLADKGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLQARCSIIAAANPN 653 G + L DE ++ + ++++ E M+++ ++I L ++A NP Sbjct: 106 GPVF---SNFILADEVNRSPAKVQSALLECMQEKQVTIGDT--TYPLDNPFLVLATQNPV 160 Query: 654 --GGRYNSTLPLAQNVSLTEPILSRFDILCVVRDLVDEEADERLATFVVDS 702 G Y L E + RF ++ + +D+E++ + V + Sbjct: 161 EQEGTYP----------LPEAQVDRF-MMKIHLTYLDKESELEVMRRVSNM 200 >3VV5-A nrPDB Length = 260 Score = 32.1 bits (71), Expect = 0.98, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Query: 184 ESLSNVKANSYSEWITQPNVSRTIARELKSFLLEYTDETGRSVYGARIRTLGEMNSESL 242 ++L ++ A WIT V++ +E K LE T + G V+ R+ ++SL Sbjct: 173 DALQDLLAGRIDTWITDRFVAKEAIKERK---LENTLQVGELVFQERVAMAVAKGNKSL 228 >4YPL-A nrPDB Length = 555 Score = 32.1 bits (71), Expect = 1.0, Method: Composition-based stats. Identities = 27/130 (20%), Positives = 52/130 (40%), Gaps = 15/130 (11%) Query: 506 YGHRDIKTAVACSLFGGVPKNVNGKHSIRGDINVL-LLGDPGTAKSQILKYVEKTAHRAV 564 YG +D+K + L + + +R +L L+G PG K+ + + + ++ +R Sbjct: 82 YGLKDVKERILEYL---AVRQLTQGLDVRNKAPILVLVGPPGVGKTSLGRSIARSMNRKF 138 Query: 565 FATGQGASAVGLTASVRKDPIT-----KEWTLEGGALVLADKGVCLIDEFDKMNDQDR-- 617 G V A +R T + V V L+D+ DKM+ R Sbjct: 139 HRISLG--GVRDEAEIRGHRRTYIGAMPGKLIHAMKQVGVINPVILLDQIDKMSSDWRGD 196 Query: 618 --TSIHEAME 625 +++ E ++ Sbjct: 197 PASAMLEVLD 206 >4LZZ-A nrPDB Length = 268 Score = 32.1 bits (71), Expect = 1.2, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 48/125 (38%), Gaps = 19/125 (15%) Query: 539 VLLLGDPGTAKSQILKYVEKTAHRAVFATGQGASAVGLTASVRKDPITKEWT-LEGGALV 597 VL+ G+ G K + + + K + R+ + AS+ +D E E GA Sbjct: 44 VLITGESGVGKEVVARLIHKLSDRS-----KEPFVALNVASIPRDIFEAELFGYEKGAFT 98 Query: 598 -----------LADKGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLQARCSI 646 LAD G +DE +++ + + + +E + G ++ I Sbjct: 99 GAVSSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESG--KFYRLGGRKEIEVNVRI 156 Query: 647 IAAAN 651 +AA N Sbjct: 157 LAATN 161 >6GYL-Q nrPDB Length = 735 Score = 32.1 bits (71), Expect = 1.2, Method: Composition-based stats. Identities = 33/126 (26%), Positives = 62/126 (49%), Gaps = 9/126 (7%) Query: 65 EEQMNEVDLMDDNMYE-DYAADHNRDRYDPDQVDDREQQELSLSERRRIDAQLNERDRLL 123 ++ M+E D D++ E DY + D P + D +QE SE+R L L Sbjct: 451 QQAMDEDDRDDNSEVELDYDEEFADDEEAP--IIDGNEQENKESEQRIKKEMLQANAMGL 508 Query: 124 RNV-AYIDDEDEEQEGAAQLDEMGLPVQRRRRRRQYEDLENSDDDLLSDMDIDPLREELT 182 R+ A ++E++E G ++DE G +++ ++ + L +SD++ +I+P E Sbjct: 509 RDEEAPSENEEDELFGEKKIDEDGERIKKALQKTELAALYSSDEN-----EINPYLSESD 563 Query: 183 LESLSN 188 +E+ N Sbjct: 564 IENKEN 569 >3V44-A nrPDB Length = 407 Score = 32.1 bits (71), Expect = 1.2, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 49/101 (48%), Gaps = 16/101 (15%) Query: 60 DIDEVEEQMNEVDLMDDNMY------EDYAADHNRDRYDPDQVDDREQQELSLSERRRID 113 D++++ NE++ +DDN + ++ A D N+ + PD + DR L+ ++I Sbjct: 300 DLEQLTLAQNEINKIDDNAFWGLTHLKELALDTNQLKSVPDGIFDR------LTSLQKIW 353 Query: 114 AQLNERDRLLRNVAY----IDDEDEEQEGAAQLDEMGLPVQ 150 N D + Y ++ ++++G+A+ G PV+ Sbjct: 354 LHTNPWDCSCPRIDYLSRWLNKNSQKEQGSAKCSGSGKPVR 394 >3M6A-A nrPDB Length = 543 Score = 31.7 bits (70), Expect = 1.3, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 69/180 (38%), Gaps = 29/180 (16%) Query: 506 YGHRDIKTAVACSLFGGVPKNVNGKHSIRGDINVLLLGDPGTAKSQILKYVEKTAHRAVF 565 +G +K + L V K S++G I + L G PG K+ + K + K Sbjct: 84 HGLEKVKERILEYL--AVQKL---TKSLKGPI-LCLAGPPGVGKTSLAKSIAK------- 130 Query: 566 ATGQGASAVGLTASVRKDPITKEWTLEGGALV------LADKG----VCLIDEFDKMNDQ 615 + G+ + L + I GA+ + G V L+DE DKM+ Sbjct: 131 SLGRKFVRISLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAGKLNPVFLLDEIDKMSSD 190 Query: 616 DR----TSIHEAME-QQSISISKAGIVTTLQ-ARCSIIAAANPNGGRYNSTLPLAQNVSL 669 R +++ E ++ +Q+ S S I T ++ IA AN + +++ Sbjct: 191 FRGDPSSAMLEVLDPEQNSSFSDHYIEETFDLSKVLFIATANNLATIPGPLRDRMEIINI 250 >4YPN-A nrPDB Length = 293 Score = 31.7 bits (70), Expect = 1.4, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 52/130 (40%), Gaps = 15/130 (11%) Query: 506 YGHRDIKTAVACSLFGGVPKNVNGKHSIRGDINVL-LLGDPGTAKSQILKYVEKTAHRAV 564 YG +D+K + L + + +R +L L+G PG K+ + + + ++ +R Sbjct: 115 YGLKDVKERILEYL---AVRQLTQGLDVRNKAPILVLVGPPGVGKTSLGRSIARSMNRKF 171 Query: 565 FATGQGASAVGLTASVRKDPIT-----KEWTLEGGALVLADKGVCLIDEFDKMNDQDR-- 617 G V A +R T + V V L+DE DKM+ R Sbjct: 172 HRISLG--GVRDEAEIRGHRRTYIGAMPGKLIHAMKQVGVINPVILLDEIDKMSSDWRGD 229 Query: 618 --TSIHEAME 625 +++ E ++ Sbjct: 230 PASAMLEVLD 239 >4OH7-A nrPDB Length = 320 Score = 31.3 bits (69), Expect = 1.6, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 85/249 (34%), Gaps = 36/249 (14%) Query: 579 SVRKDPITKEWTLEGGALVLADKGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVT 638 ++ +D ++ L+ G + G L F+K++ + R S M Q Sbjct: 31 AILEDAKARKARLKAGEVERPYAGKVLAMIFEKLSTRTRVSFDVGMRQ------------ 78 Query: 639 TLQARCSIIAAANPNGGRYNSTLPLAQNVSLTEPILSRFDILCVVRDLVDEEADERLATF 698 L ++ + GR ++ ++ T +LSR+ + ++ E LA + Sbjct: 79 -LGGETIMLTGSEMQLGR-------SETIADTAKVLSRY-VDAIMIRTTAHERMLELAEY 129 Query: 699 ----VVDSHVRS-HPEN--DEDREGEELKNNGESAIEQGEDEINEQLNARQRRLQRQRKK 751 V+++ HP + EE + + + N L++ R Sbjct: 130 ATVPVINALTDDTHPCQIMADVLTYEEHRGPIKGKTFAWMGDGNNVLHSLVEAAARFDFN 189 Query: 752 EEEISPIPQELLMKYIHYARTKIYPKLHQMDMDK--------VSRVYADLRRESISTGSF 803 +P E +YI +AR + D +K V+ + + +E + G Sbjct: 190 VNIATPKGSEPKSQYIDWARANGAGIMSTTDPEKAASGADCIVTDTWVSMGQEDHARGHN 249 Query: 804 PITVRHLES 812 + + Sbjct: 250 VFIPYQVNA 258 >3ICS-A nrPDB Length = 588 Score = 31.3 bits (69), Expect = 1.7, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 34/97 (35%), Gaps = 16/97 (16%) Query: 451 IEANSIKRREGNTANEGEEGLDVFSWTEEEERE-FRKISRDR---GIIDKIISS-----M 501 + +++R + +V +EE+ + ++ + D +I S + Sbjct: 94 LLVQTVERMSKRFNLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAKPI 153 Query: 502 APSIYGHRDIKTAVACSLFGGVPKNVNGKHSIRGDIN 538 PSI G + K +NV I+ I+ Sbjct: 154 VPSIPGIEEAKALFTL-------RNVPDTDRIKAYID 183 >5WWN-A nrPDB Length = 709 Score = 31.3 bits (69), Expect = 1.9, Method: Composition-based stats. Identities = 53/269 (19%), Positives = 96/269 (35%), Gaps = 39/269 (14%) Query: 55 VDDVPDIDEVEEQMNEVDLMDDNMYEDYAADHNRDRYDPDQVDDREQQELSLSERRRID- 113 +DDV D +E EE+ + + D+ M E D + + +++ +E++ E I+ Sbjct: 326 LDDVIDANE-EEEAEQTNGKDETMME----------IDDEMMVEQDNEEVAGDEEYDIED 374 Query: 114 ------AQLNERDRLLRNVAYIDDEDEEQEGAAQLDEMGLPVQRRRRRRQYEDLENSDDD 167 E +R LR ++ ED E +L+ ++R +R R ++L N D Sbjct: 375 NEGFEELSPEEEERQLREFRDMEKEDREFPDEIELEPSESAIERLKRYRGLKNLYNCDWQ 434 Query: 168 LLSDMDIDPLREELTLESLSNVKANSYSEWITQPNVSRTIARELKSFLLEYTDETGRSVY 227 + + D E L + N K N I +E K +++ Sbjct: 435 -VDEKDPSSPAEWKRLLRIGNYK-----------NTKNRIIKETK--------NEAQAIA 474 Query: 228 GARIRTLGEMNSESLEVNYRHLAESKAILALFLAKCPEEMLKIFDLVAMEATELHYPDYA 287 G RIR LE + + + L + + F L E + P Sbjct: 475 GDRIRMFIRFPKFLLE-KIQDPKQLLFAVYGLLLHEHKNAVVNFSLQRWEQYDKPVPSQE 533 Query: 288 RIHSEIHVRISDFPTIYSLRELRESNLSS 316 I + VR ++S +N+ Sbjct: 534 PIVVQYGVRRYTIQPLFSQGSNSPNNVHK 562 >6FAI-k nrPDB Length = 788 Score = 31.3 bits (69), Expect = 2.0, Method: Composition-based stats. Identities = 53/269 (19%), Positives = 96/269 (35%), Gaps = 39/269 (14%) Query: 55 VDDVPDIDEVEEQMNEVDLMDDNMYEDYAADHNRDRYDPDQVDDREQQELSLSERRRID- 113 +DDV D +E EE+ + + D+ M E D + + +++ +E++ E I+ Sbjct: 405 LDDVIDANE-EEEAEQTNGKDETMME----------IDDEMMVEQDNEEVAGDEEYDIED 453 Query: 114 ------AQLNERDRLLRNVAYIDDEDEEQEGAAQLDEMGLPVQRRRRRRQYEDLENSDDD 167 E +R LR ++ ED E +L+ ++R +R R ++L N D Sbjct: 454 NEGFEELSPEEEERQLREFRDMEKEDREFPDEIELEPSESAIERLKRYRGLKNLYNCDWQ 513 Query: 168 LLSDMDIDPLREELTLESLSNVKANSYSEWITQPNVSRTIARELKSFLLEYTDETGRSVY 227 + + D E L + N K N I +E K +++ Sbjct: 514 -VDEKDPSSPAEWKRLLRIGNYK-----------NTKNRIIKETK--------NEAQAIA 553 Query: 228 GARIRTLGEMNSESLEVNYRHLAESKAILALFLAKCPEEMLKIFDLVAMEATELHYPDYA 287 G RIR LE + + + L + + F L E + P Sbjct: 554 GDRIRMFIRFPKFLLE-KIQDPKQLLFAVYGLLLHEHKNAVVNFSLQRWEQYDKPVPSQE 612 Query: 288 RIHSEIHVRISDFPTIYSLRELRESNLSS 316 I + VR ++S +N+ Sbjct: 613 PIVVQYGVRRYTIQPLFSQGSNSPNNVHK 641 >1OJL-A nrPDB Length = 304 Score = 30.9 bits (68), Expect = 2.5, Method: Composition-based stats. Identities = 41/243 (16%), Positives = 83/243 (34%), Gaps = 34/243 (13%) Query: 536 DINVLLLGDPGTAKSQILKYVEKTAHR-----------AVFATGQGASAVGLTASVRKDP 584 D VL+ GD GT K + + + + R A+ + + G K Sbjct: 25 DATVLIHGDSGTGKELVARALHACSARSDRPLVTLNCAALNESLLESELFGH----EKGA 80 Query: 585 ITKEWTLEGGALVLADKGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLQARC 644 T G V AD G +DE ++ + + A++++ + + G T+ Sbjct: 81 FTGADKRREGRFVEADGGTLFLDEIGDISPLMQVRLLRAIQEREVQ--RVGSNQTISVDV 138 Query: 645 SIIAAANPNGGRYNSTLPLAQNVS---LTEPILSRFDILCVVRDLVDEEADE--RLATFV 699 +IAA + LA+ VS + + R +++ + + + ++ LA Sbjct: 139 RLIAATH---------RDLAEEVSAGRFRQDLYYRLNVVAIEMPSLRQRREDIPLLADHF 189 Query: 700 VDSHVRSHPENDEDREGEELKNNGESAIEQGEDEINEQLNARQRRLQRQRKKEEEISPIP 759 + N + +G + I E NA +R + + +P Sbjct: 190 LRRFAER---NRKVVKGFTPQAMDLLIHYDWPGNIRELENAIERAVVLLTGEYISERELP 246 Query: 760 QEL 762 + Sbjct: 247 LAI 249 >3U5Z-B nrPDB Length = 324 Score = 30.5 bits (67), Expect = 3.2, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 45/122 (36%), Gaps = 15/122 (12%) Query: 539 VLLLGDPGTAKSQILKYVEKTAHRAVFATGQGASAVGLTASVRKDPITKEWTLEGGALVL 598 +L PGT K+ + K + V A + + P+T A Sbjct: 51 ILHSPSPGTGKTTVAKALCH----DVNADMMFVNGSDCKIDFVRGPLTN---FASAASFD 103 Query: 599 ADKGVCLIDEFDKM----NDQDRTSIHEAMEQQSISISKA----GIVTTLQARCSIIAAA 650 + V +IDEFD+ + + S EA I A GI+ LQ+RC +I Sbjct: 104 GRQKVIVIDEFDRSGLAESQRHLRSFMEAYSSNCSIIITANNIDGIIKPLQSRCRVITFG 163 Query: 651 NP 652 P Sbjct: 164 QP 165 >1HQC-A nrPDB Length = 324 Score = 30.5 bits (67), Expect = 3.3, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 52/144 (36%), Gaps = 22/144 (15%) Query: 538 NVLLLGDPGTAKSQILKYVEK-TAHRAVFATGQGASAVGLTASVRKDPITKEWTLEGGAL 596 ++LL G PG K+ + + +G G A++ A Sbjct: 40 HLLLFGPPGLGKTTLAHVIAHELGVNLRVTSGPAIEKPGDLAAIL-------------AN 86 Query: 597 VLADKGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLQARCSIIAAANPNGGR 656 L + + IDE +++ Q ++ AME + I I AR + P Sbjct: 87 SLEEGDILFIDEIHRLSRQAEEHLYPAMEDFVMDIV---IGQGPAARTIRLEL--PRFTL 141 Query: 657 YNSTLPLAQNVSLTEPILSRFDIL 680 +T +T P+LSRF I+ Sbjct: 142 IGATTRPGL---ITAPLLSRFGIV 162 >3CRV-A nrPDB Length = 551 Score = 30.5 bits (67), Expect = 3.4, Method: Composition-based stats. Identities = 19/123 (15%), Positives = 48/123 (39%), Gaps = 12/123 (9%) Query: 681 CVVRDLVDEEADERLATFVVDSHVRSHPENDEDREGEELKNNGESAIEQGEDEINEQLNA 740 D E D L +++ ++ D+ E + + Q + ++ + Sbjct: 158 YFFIDRYREFIDIDLREYMIVIDEA----HNLDKVNELEERSLSEITIQMAIKQSKSEES 213 Query: 741 RQRRLQRQRKKEEEISPIPQELLMKYIHYARTKIYPKLHQMDMDKVSRVYADLRRESIST 800 R+ + + E + P + Y + + PKL + +++ ++ Y D+R++S+ Sbjct: 214 RRILSKLLNQLREVVLPDEK--------YIKVENVPKLSKEELEILADDYEDIRKDSLKQ 265 Query: 801 GSF 803 G Sbjct: 266 GKV 268 >6D8Z-A nrPDB Length = 319 Score = 30.1 bits (66), Expect = 3.7, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 68/166 (40%), Gaps = 7/166 (4%) Query: 681 CVVRDLVDEEAD-ERLATFVVDSHVRSHPENDEDREGEELKNNGESAIEQGEDEINEQLN 739 V+++LV+ E D R +VV+ ++ E+ + + I Q D + Sbjct: 16 YVLQELVETERDYVRDLGYVVEGYMALMKEDGVPDDMKGKDKIVFGNIHQIYDWHRDFFL 75 Query: 740 ARQRRLQRQRKKEEEISPIPQELLMKYIHYARTKIYPKLHQMDMDKVSRVYADLRRESIS 799 + +K + + L YI Y + K PK + + + + DL++ Sbjct: 76 GELEKCLEDPEKLGSLFVKHERRLHMYIAYCQNK--PKSEHIVSEYIDTFFEDLKQRLGH 133 Query: 800 TGSFP-ITVRHLESILR---IAESFAKMRLSEFVSSYDLDRAIKVV 841 + ++ ++ I++ + + F K + + +L+RA++V+ Sbjct: 134 RLQLTDLLIKPVQRIMKYQLLLKDFLKYSKKASLDTSELERAVEVM 179 >4BL8-A nrPDB Length = 831 Score = 30.1 bits (66), Expect = 3.9, Method: Composition-based stats. Identities = 18/125 (14%), Positives = 48/125 (38%), Gaps = 9/125 (7%) Query: 698 FVVDSHVRSHPENDEDREGEELKNNGE--SAIEQGEDEINEQLNARQRRLQRQRKKEEEI 755 F +D H++ + + +G L + + +++ + + R+ + Sbjct: 585 FEIDPHLQERVDKGIETDGSNLSGVSAKCAWDDLSRPPEDDEDSRSICIGTQPRRLSGKD 644 Query: 756 SPIPQELLMKYIHYARTKIYPKLHQMDMDKVSRVYADLRRESISTGSFP-------ITVR 808 + +E L + + + P ++ + ++ A R++S+ + S I R Sbjct: 645 TEQIRETLRRGLEINSKPVLPPINPQRQNGLAHDRAPSRKDSLESDSSTAIIPHELIRTR 704 Query: 809 HLESI 813 LES+ Sbjct: 705 QLESV 709 >4QMD-A nrPDB Length = 193 Score = 30.1 bits (66), Expect = 4.1, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 13/93 (13%) Query: 563 AVFATGQGASAVGLTASVRK--DPITKEWTLEGGALVLADKGVCLIDEFDKMNDQDRTSI 620 ++ T TA + DPIT + LE A A G+ + ++R S+ Sbjct: 8 GIYDTTTDNKCSIKTAVAKNMLDPITGQKLLEAQA---ATGGIV------DLLSRERYSV 58 Query: 621 HEAMEQQSISISKAGIVTTLQARCSIIAAANPN 653 H+AME+ I L A+ + +P Sbjct: 59 HKAMERGL--IENTSTQRLLNAQKAFTGIEDPV 89 >5BNX-C nrPDB Length = 70 Score = 30.1 bits (66), Expect = 4.2, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%) Query: 73 LMDDNMYEDYAADHNRDRYDPD--QVDDREQQELSLSERRRIDAQLNERDR 121 L+ D M DY A D Y+ + +DD + +EL+ S+R + + +RDR Sbjct: 12 LIGDGMERDYRAIPELDAYEAEGLALDDEDVEELTASQREAAERAMRQRDR 62 >5W4K-1E nrPDB Length = 206 Score = 29.8 bits (65), Expect = 5.5, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 28/76 (36%), Gaps = 10/76 (13%) Query: 390 LQEAPGTVPPGRLPRHREVILLADLVDVSKPGEEVEVTGIYKNNYDGNLNAKNGFPVFAT 449 L+E P G V++ KPGE V+VTG K + + F Sbjct: 78 LREIRDFNPEG----------DTVTVEIFKPGERVDVTGTSKGRGFAGVMKRWNFAGGPD 127 Query: 450 IIEANSIKRREGNTAN 465 A+ I R G+ N Sbjct: 128 SHGAHKIHRHPGSIGN 143 >6N8J-m nrPDB Length = 486 Score = 29.4 bits (64), Expect = 6.9, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 9/55 (16%) Query: 512 KTAVACSLFGGVPKNVNGKHSIRGDINVLLLGDPGTAKSQIL-----KYVEKTAH 561 L + + H+ R I+V +G P T KS I+ K V + A Sbjct: 295 GKGSLIQLL----RQFSQLHTDRKQISVGFIGYPNTGKSSIINTLRKKKVCQVAP 345 >4F8X-A nrPDB Length = 335 Score = 29.4 bits (64), Expect = 7.5, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 3/53 (5%) Query: 544 DPGTAKSQILKYVEKTAHRAVFATGQGASA---VGLTASVRKDPITKEWTLEG 593 +PGT + +L+ V R + G G + VG T S+ TK+ ++ Sbjct: 185 NPGTKSTAVLQLVSNLRKRGIRIDGVGLESHFIVGETPSLADQLATKQAYIKA 237 >2D2N-C nrPDB Length = 147 Score = 29.4 bits (64), Expect = 7.7, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 27/73 (36%), Gaps = 9/73 (12%) Query: 500 SMAPSIYGHRDIKTAVACSLFGGVPKNVNGKHSIRG---------DINVLLLGDPGTAKS 550 ++A +++ + A A LF GV + R D+ + +L DP Sbjct: 30 ALAQAVFASLFSRDAAAQGLFSGVSADNPDSADFRAHCVRVVNGLDVAINMLNDPAVLNE 89 Query: 551 QILKYVEKTAHRA 563 Q+ + RA Sbjct: 90 QLAHLSAQHQARA 102 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.311 0.124 0.309 Lambda K H 0.267 0.0380 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,784,332 Number of Sequences: 36641 Number of extensions: 1206288 Number of successful extensions: 4498 Number of sequences better than 10.0: 69 Number of HSP's better than 10.0 without gapping: 38 Number of HSP's successfully gapped in prelim test: 106 Number of HSP's that attempted gapping in prelim test: 4281 Number of HSP's gapped (non-prelim): 244 length of query: 868 length of database: 10,336,785 effective HSP length: 106 effective length of query: 762 effective length of database: 6,452,839 effective search space: 4917063318 effective search space used: 4917063318 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 63 (29.0 bits)